Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0002787

Physical Location & Seq

Genomic Coordinates Reverse (-)

15567731 .. 15570659

Gene Structure 2929 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g18790.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1665 bp

ATGTTAGTCAAATCTCATCCGTCCAAACGCGTACTTCCATCTCCCAAGTCCCAAACTTCCCCCAATCTCGAAGCATACATACGCACTCGAACCCCGTTCTCTCTCTCTTTAGTCGGCCACAAACCCTTCCTTTCTCTCCCAAATCCCAAACCCCCAAAATCCAAAAACACACCTCCGAAATTACATAAAGATCGAAGCTTTCATTCTCACACGCAGTCAGTGAGAAGGAGAGGCAGTGAAGTGAAAACCCGCATGGATTCAGATCAGGGGAAGCTTTTTATTGGTGGGATTTCATGGGAGACCTCGGAGGATAAGCTTAAAGAGTACTTCAGCAACTACGGCGACGTTTTGCAGACGGTGGTCATGAGGGACAAGGTCTCCGGCCGCCCCAGGGGTTTTGGGTTTGTGGTTTTTGTCGATCCTGCTGTTCTCGATAGGGTTCTTCAGGATAAGCACACCATCGATGGTAGAACGGTTGAGGCTAAGAGGGCCCTATCAAGAGAGGAGCAGCAAACCACTGGAAGAGTTGGAAATGCTAATCCTACTAGAAGTGCAGGAAGTGGGGGAAATGTTAGGACCAAGAAGATATTTGTTGGAGGGTTGCCCCCCACTCTTAGTGAGGAAGGATTTCGTGAGTATTTTGAATCTTATGGCCATGTAACTGATGTAGTAGTAATGTATGACCAAAGTACTGGACGTCCTCGTGGTTTTGGGTTTATTTCATTTGACACTGAAGAAGCTGTTGATAGGGTTTTGCACAAGACATTTCATGATTTAAATGGTAAGCAAGTGGAAGTTAAGCGGGCTCTTCCCAAAGATGCCAACCCCGGTGGGGGTAGCCGTAGCATGGGCGGCGGTCAAGGTGGTGGCGGTGCTGGTGGTGGTGGTTATCAAGGCTATGGGGTATCTACTGGCAACCCAAATTCATATGATGTCCGAATGGACTCCAATAGGTACATGCAATCCCAGAGTGCTGGAGGTGGGTTTCCACCTTATGGTTCTTCTGGGTATAGTGCACCCAGTTACGGGTATGGTCCTACCAGTAATGGAATTGGCTATGGCAATTATGGAAGTTATGGAGGTACCAATACTGGTTATGGAGGGCCAGCAGCTGCTGCATATGGAAACCCTAATGCCCCAAATGCCGGTTATGCTAGTGGTCCGCCAGGTGCCCCTAGAAGTGCGTGGAGCTCTCAAGCTCCCTCTGGATATGGTGCTATGGGGTATGGGAATACTGCTCCTTGGGGTGTTTCTGGCAGTGCAGGTACAGGCAGTGGTGGCCCTGGTTCTGCACCTGCTGGTCAATCACCTAGTGCAGCGGCTGGGTATGGAACTCAAGGTTATGGTTATGGTGGGTACAGTGGAACGGATGCGTCCTATGCAAATCCGTCTGGATATGGAGCTGTTGGAGGACGTTCGGGGAGTGTCCCAAATAACAATGTTGGTGCTCCAGGTGGGGAGCAAGGTAGTACTGGTGGCTACGGTGGAAGTGGCTATGGCGATTCAAATGGAAATGCAGGTTATGGAAATGCTGGTTGGAGATCGATCCATCACAAGCTTCTGGAAATTATGGTGGTCAGGCAAATGGTGGACAAGTTGGTTATGGTAGTGGGTATGGAAGTGCTCAGGCACGACAATCCCAGCAGCAGTAATTTTGATGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0005849 GO:0006139 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009791 GO:0009987 GO:0010228 GO:0010467 GO:0016070 GO:0016071 GO:0022414 GO:0031123 GO:0031124 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0047484 GO:0048583 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0061458 GO:0065007 GO:0070013 GO:0071704 GO:0080134 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:1901000 GO:1901360 GO:1901363 GO:2000070

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

RRM_1

Protein Analysis

555

Amino Acids

57.71

Weight (kDa)

9.49

Isoelectric Point (pI)

40.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002787)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14300 AT4G14300
fragaria_vesca	FvH4_2g20810 FvH4_4g04320 FvH4_4g04320 FvH4_4g04320 FvH4_4g04320
malus_domestica	MD05G1191700.v1.1 MD13G1219200.v1.1 MD16G1224500.v1.1
prunus_persica	Prupe.1G045900_v2.0.a1 Prupe.1G045900_v2.0.a1 Prupe.8G218100_v2.0.a1
pyrus_communis	pycom05g17830 pycom05g17870 pycom10g15490 pycom13g19410 pycom16g18790
rosa_chinensis	RchiOBHm_Chr4g0394771 RchiOBHm_Chr6g0287221
rosa_laevigata	RLG00000009663 RLG00000012517
rosa_multiflora	Rmu_sc0005297.1_g000024 Rmu_sc0005356.1_g000004
rosa_roxburghii	Rroxscaffold_5G00339810 Rroxscaffold_7G00181660
rosa_rugosa	Rorug03G0361600.1 Rorug06G0185900
rosa_samantha	Rh4AG055000 Rh4BG052900 Rh4CG059700 Rh4DG051400 Rh6AG297400 Rh6BG302800 Rh6CG307300 Rh6CG310700 Rh6DG294400
rosa_wichuraiana	Rw4G004390 Rw6G025690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1303
AatII	GACGTC	1 cut(s)	700
Acc36I	ACCTGC	3 cut(s)	1253, 1303, 1508
Acc65I	GGTACC	1 cut(s)	1082
AccB1I	GGYRCC	2 cut(s)	1082, 1169
AccB7I	CCANNNNNTGG	1 cut(s)	995
AccII	CGCG	1 cut(s)	30
AciI	CCGC	8 cut(s)	250, 385, 802, 852, 855, 870, 1163, 1319
AclWI	GGATC	2 cut(s)	413, 1540
AcoI	YGGCCR	3 cut(s)	115, 382, 652
AcsI	RAATTY	1 cut(s)	922
AcuI	CTGAAG	3 cut(s)	313, 428, 753
AcyI	GRCGYC	1 cut(s)	697
AdeI	CACNNNGTG	1 cut(s)	1313
AfaI	GTAC	8 cut(s)	33, 326, 691, 956, 1084, 1267, 1358, 1471
AfiI	CCNNNNNNNGG	8 cut(s)	391, 832, 833, 847, 995, 1025, 1026, 1145
AflIII	ACRYGT	1 cut(s)	28
AgsI	TTSAA	2 cut(s)	644, 1506
AjnI	CCWGG	4 cut(s)	389, 1165, 1282, 1450
AjuI	GAANNNNNNNTTGG	2 cut(s)	1519, 1551
AluBI	AGCT	9 cut(s)	198, 274, 316, 740, 1112, 1191, 1199, 1403, 1558
AluI	AGCT	9 cut(s)	198, 274, 316, 740, 1112, 1191, 1199, 1403, 1558
Alw21I	GWGCWC	4 cut(s)	1018, 1193, 1450, 1626
Alw26I	GTCTC	2 cut(s)	293, 382
Alw44I	GTGCAC	1 cut(s)	1014
AlwI	GGATC	2 cut(s)	413, 1540
AlwNI	CAGNNNCTG	3 cut(s)	1112, 1115, 1322
AoxI	GGCC	6 cut(s)	115, 382, 489, 652, 1103, 1279
ApaI	GGGCCC	1 cut(s)	493
ApaLI	GTGCAC	1 cut(s)	1014
ApeKI	GCWGC	6 cut(s)	508, 1109, 1112, 1115, 1316, 1644
ApoI	RAATTY	1 cut(s)	922
Asp700I	GAANNNNTTC	1 cut(s)	627
Asp718I	GGTACC	1 cut(s)	1082
AspS9I	GGNCC	7 cut(s)	489, 490, 576, 1034, 1103, 1160, 1280
AsuC2I	CCSGG	1 cut(s)	828
AsuHPI	GGTGA	1 cut(s)	1299
AvaII	GGWCC	3 cut(s)	576, 1034, 1160
BaeGI	GKGCMC	3 cut(s)	493, 1018, 1174
BalI	TGGCCA	1 cut(s)	654
BanI	GGYRCC	2 cut(s)	1082, 1169
BanII	GRGCYC	3 cut(s)	493, 808, 1193
BarI	GAAGNNNNNNTAC	2 cut(s)	63, 95
BauI	CACGAG	1 cut(s)	702
Bbv12I	GWGCWC	4 cut(s)	1018, 1193, 1450, 1626
BbvI	GCAGC	6 cut(s)	520, 1099, 1102, 1121, 1328, 1656
BccI	CCATC	5 cut(s)	46, 458, 467, 1557, 1652
BceAI	ACGGC	2 cut(s)	355, 825
BciT130I	CCWGG	4 cut(s)	391, 1167, 1284, 1452
BcnI	CCSGG	1 cut(s)	828
BcoDI	GTCTC	2 cut(s)	293, 382
BfaI	CTAG	4 cut(s)	546, 1155, 1176, 1311
BfuAI	ACCTGC	3 cut(s)	1253, 1303, 1508
BisI	GCNGC	9 cut(s)	385, 509, 853, 1110, 1113, 1116, 1317, 1320, 1645
BlsI	GCNGC	9 cut(s)	386, 510, 854, 1111, 1114, 1117, 1318, 1321, 1646
BmcAI	AGTACT	3 cut(s)	326, 691, 1471
Bme1390I	CCNGG	5 cut(s)	391, 828, 1167, 1284, 1452
Bme18I	GGWCC	3 cut(s)	576, 1034, 1160
BmgT120I	GGNCC	7 cut(s)	489, 490, 576, 1034, 1103, 1160, 1280
BmiI	GGNNCC	3 cut(s)	491, 1084, 1171
BmrFI	CCNGG	5 cut(s)	391, 828, 1167, 1284, 1452
BmrI	ACTGGG	1 cut(s)	1014
BmsI	GCATC	2 cut(s)	808, 1360
BmuI	ACTGGG	1 cut(s)	1014
BoxI	GACNNNNGTC	1 cut(s)	359
BpmI	CTGGAG	2 cut(s)	996, 1434
Bpu10I	CCTNAGC	1 cut(s)	1625
BpuEI	CTTGAG	2 cut(s)	1179, 1320
BpuMI	CCSGG	1 cut(s)	828
Bsa29I	ATCGAT	2 cut(s)	462, 1544
BsaBI	GATNNNNATC	1 cut(s)	261
BsaHI	GRCGYC	1 cut(s)	697
BsaI	GGTCTC	2 cut(s)	293, 382
BsaJI	CCNNGG	6 cut(s)	303, 389, 390, 826, 1241, 1282
BsaXI	ACNNNNNCTCC	4 cut(s)	220, 250, 362, 392
Bsc4I	CCNNNNNNNGG	8 cut(s)	391, 832, 833, 847, 995, 1025, 1026, 1145
Bse118I	RCCGGY	1 cut(s)	1145
Bse1I	ACTGG	7 cut(s)	523, 697, 916, 1020, 1041, 1096, 1477
Bse8I	GATNNNNATC	1 cut(s)	261
BseBI	CCWGG	4 cut(s)	391, 1167, 1284, 1452
BseCI	ATCGAT	2 cut(s)	462, 1544
BseDI	CCNNGG	6 cut(s)	303, 389, 390, 826, 1241, 1282
BseGI	GGATG	2 cut(s)	16, 1375
BseJI	GATNNNNATC	1 cut(s)	261
BseLI	CCNNNNNNNGG	8 cut(s)	391, 832, 833, 847, 995, 1025, 1026, 1145
BseMII	CTCAG	1 cut(s)	1639
BseNI	ACTGG	7 cut(s)	523, 697, 916, 1020, 1041, 1096, 1477
BseRI	GAGGAG	1 cut(s)	518
BseSI	GKGCMC	3 cut(s)	493, 1018, 1174
BseX3I	CGGCCG	1 cut(s)	382
BseXI	GCAGC	6 cut(s)	520, 1099, 1102, 1121, 1328, 1656
BseYI	CCCAGC	2 cut(s)	1322, 1640
BsgI	GTGCAG	4 cut(s)	573, 1275, 1281, 1335
Bsh1236I	CGCG	1 cut(s)	30
Bsh1285I	CGRYCG	1 cut(s)	385
BshFI	GGCC	6 cut(s)	117, 384, 491, 654, 1105, 1281
BshNI	GGYRCC	2 cut(s)	1082, 1169
BshVI	ATCGAT	2 cut(s)	462, 1544
BsiEI	CGRYCG	1 cut(s)	385
BsiHKAI	GWGCWC	4 cut(s)	1018, 1193, 1450, 1626
BsiSI	CCGG	3 cut(s)	381, 828, 1146
BslFI	GGGAC	3 cut(s)	34, 383, 1412
BslI	CCNNNNNNNGG	8 cut(s)	391, 832, 833, 847, 995, 1025, 1026, 1145
BsmAI	GTCTC	2 cut(s)	293, 382
BsmFI	GGGAC	3 cut(s)	34, 383, 1412
BsnI	GGCC	6 cut(s)	117, 384, 491, 654, 1105, 1281
Bso31I	GGTCTC	2 cut(s)	293, 382
Bsp120I	GGGCCC	1 cut(s)	489
Bsp1286I	GDGCHC	7 cut(s)	493, 808, 1018, 1174, 1193, 1450, 1626
Bsp143I	GATC	5 cut(s)	190, 262, 418, 1541, 1545
BspACI	CCGC	8 cut(s)	250, 385, 802, 852, 855, 870, 1163, 1319
BspANI	GGCC	6 cut(s)	117, 384, 491, 654, 1105, 1281
BspCNI	CTCAG	1 cut(s)	1638
BspDI	ATCGAT	2 cut(s)	462, 1544
BspFNI	CGCG	1 cut(s)	30
BspHI	TCATGA	2 cut(s)	363, 769
BspLI	GGNNCC	3 cut(s)	491, 1084, 1171
BspMI	ACCTGC	3 cut(s)	1253, 1303, 1508
BspPI	GGATC	2 cut(s)	413, 1540
BspQI	GCTCTTC	1 cut(s)	813
BspT107I	GGYRCC	2 cut(s)	1082, 1169
BspTNI	GGTCTC	2 cut(s)	293, 382
BsrFI	RCCGGY	1 cut(s)	1145
BsrI	ACTGG	7 cut(s)	523, 697, 916, 1020, 1041, 1096, 1477
BssAI	RCCGGY	1 cut(s)	1145
BssECI	CCNNGG	6 cut(s)	303, 389, 390, 826, 1241, 1282
BssMI	GATC	5 cut(s)	190, 262, 418, 1541, 1545
BssNI	GRCGYC	1 cut(s)	697
BssSI	CACGAG	1 cut(s)	702
BssT1I	CCWWGG	1 cut(s)	1241
Bst2BI	CACGAG	1 cut(s)	702
Bst2UI	CCWGG	4 cut(s)	391, 1167, 1284, 1452
Bst4CI	ACNGT	4 cut(s)	358, 475, 1361, 1484
Bst6I	CTCTTC	2 cut(s)	517, 813
BstACI	GRCGYC	1 cut(s)	697
BstAPI	GCANNNNNTGC	1 cut(s)	1115
BstC8I	GCNNGC	2 cut(s)	804, 1107
BstDEI	CTNAG	3 cut(s)	483, 614, 1625
BstF5I	GGATG	2 cut(s)	16, 1375
BstFNI	CGCG	1 cut(s)	30
BstKTI	GATC	5 cut(s)	193, 265, 421, 1544, 1548
BstMAI	GTCTC	2 cut(s)	293, 382
BstMBI	GATC	5 cut(s)	190, 262, 418, 1541, 1545
BstMCI	CGRYCG	1 cut(s)	385
BstMWI	GCNNNNNNNGC	8 cut(s)	339, 488, 852, 1115, 1142, 1151, 1278, 1379
BstNI	CCWGG	4 cut(s)	391, 1167, 1284, 1452
BstNSI	RCATGY	1 cut(s)	961
BstPAI	GACNNNNGTC	1 cut(s)	359
BstSCI	CCNGG	5 cut(s)	389, 826, 1165, 1282, 1450
BstSLI	GKGCMC	3 cut(s)	493, 1018, 1174
BstUI	CGCG	1 cut(s)	30
BstV1I	GCAGC	6 cut(s)	520, 1099, 1102, 1121, 1328, 1656
BstXI	CCANNNNNNTGG	2 cut(s)	692, 974
BstZI	CGGCCG	1 cut(s)	382
Bsu15I	ATCGAT	2 cut(s)	462, 1544
BsuRI	GGCC	6 cut(s)	117, 384, 491, 654, 1105, 1281
BsuTUI	ATCGAT	2 cut(s)	462, 1544
BtsCI	GGATG	2 cut(s)	16, 1375
BtsI	GCAGTG	3 cut(s)	241, 1264, 1279
BtsIMutI	CAGTG	7 cut(s)	225, 241, 516, 729, 1264, 1279, 1366
BveI	ACCTGC	3 cut(s)	1253, 1303, 1508
Cac8I	GCNNGC	2 cut(s)	804, 1107
CaiI	CAGNNNCTG	3 cut(s)	1112, 1115, 1322
CciI	TCATGA	2 cut(s)	363, 769
Cfr10I	RCCGGY	1 cut(s)	1145
Cfr13I	GGNCC	7 cut(s)	489, 490, 576, 1034, 1103, 1160, 1280
ClaI	ATCGAT	2 cut(s)	462, 1544
CseI	GACGC	1 cut(s)	1362
Csp6I	GTAC	8 cut(s)	32, 325, 690, 955, 1083, 1266, 1357, 1470
CspCI	CAANNNNNGTGG	2 cut(s)	811, 846
CviAII	CATG	7 cut(s)	253, 294, 364, 656, 770, 847, 958
CviQI	GTAC	8 cut(s)	32, 325, 690, 955, 1083, 1266, 1357, 1470
DdeI	CTNAG	3 cut(s)	483, 614, 1625
DpnI	GATC	5 cut(s)	192, 264, 420, 1543, 1547
DpnII	GATC	5 cut(s)	190, 262, 418, 1541, 1545
DraI	TTTAAA	1 cut(s)	777
DraIII	CACNNNGTG	1 cut(s)	1313
EaeI	YGGCCR	3 cut(s)	115, 382, 652
EagI	CGGCCG	1 cut(s)	382
Eam1104I	CTCTTC	2 cut(s)	517, 813
EarI	CTCTTC	2 cut(s)	517, 813
EciI	GGCGGA	1 cut(s)	1152
Ecl136II	GAGCTC	1 cut(s)	1191
EclXI	CGGCCG	1 cut(s)	382
Eco130I	CCWWGG	1 cut(s)	1241
Eco24I	GRGCYC	3 cut(s)	493, 808, 1193
Eco31I	GGTCTC	2 cut(s)	293, 382
Eco47I	GGWCC	3 cut(s)	576, 1034, 1160
Eco52I	CGGCCG	1 cut(s)	382
Eco53kI	GAGCTC	1 cut(s)	1191
Eco57I	CTGAAG	3 cut(s)	313, 428, 753
EcoICRI	GAGCTC	1 cut(s)	1191
EcoO109I	RGGNCCY	2 cut(s)	489, 490
EcoRII	CCWGG	4 cut(s)	389, 1165, 1282, 1450
EcoT14I	CCWWGG	1 cut(s)	1241
EcoT38I	GRGCYC	3 cut(s)	493, 808, 1193
ErhI	CCWWGG	1 cut(s)	1241
FaeI	CATG	7 cut(s)	256, 297, 367, 659, 773, 850, 961
FaqI	GGGAC	3 cut(s)	34, 383, 1412
FatI	CATG	7 cut(s)	252, 293, 363, 655, 769, 846, 957
FauI	CCCGC	2 cut(s)	257, 795
FauNDI	CATATG	2 cut(s)	928, 1120
Fnu4HI	GCNGC	9 cut(s)	385, 509, 853, 1110, 1113, 1116, 1317, 1320, 1645
FokI	GGATG	2 cut(s)	3, 1382
FriOI	GRGCYC	3 cut(s)	493, 808, 1193
Fsp4HI	GCNGC	9 cut(s)	385, 509, 853, 1110, 1113, 1116, 1317, 1320, 1645
FspBI	CTAG	4 cut(s)	546, 1155, 1176, 1311
GluI	GCNGC	9 cut(s)	385, 509, 853, 1110, 1113, 1116, 1317, 1320, 1645
GsaI	CCCAGC	2 cut(s)	1326, 1644
GsuI	CTGGAG	2 cut(s)	996, 1434
HaeIII	GGCC	6 cut(s)	117, 384, 491, 654, 1105, 1281
HapII	CCGG	3 cut(s)	381, 828, 1146
HgaI	GACGC	1 cut(s)	1362
Hin1I	GRCGYC	1 cut(s)	697
Hin1II	CATG	7 cut(s)	256, 297, 367, 659, 773, 850, 961
HindIII	AAGCTT	4 cut(s)	196, 272, 314, 1556
HinfI	GANTC	4 cut(s)	257, 644, 944, 1502
HpaII	CCGG	3 cut(s)	381, 828, 1146
HphI	GGTGA	1 cut(s)	1299
Hpy166II	GTNNAC	2 cut(s)	1016, 1591
Hpy188I	TCNGA	4 cut(s)	177, 262, 307, 938
Hpy8I	GTNNAC	2 cut(s)	1016, 1591
Hpy99I	CGWCG	1 cut(s)	347
HpyAV	CCTTC	3 cut(s)	136, 219, 617
HpyCH4III	ACNGT	4 cut(s)	358, 475, 1361, 1484
HpyCH4IV	ACGT	3 cut(s)	345, 697, 1414
HpyF10VI	GCNNNNNNNGC	8 cut(s)	339, 488, 852, 1115, 1142, 1151, 1278, 1379
HpyF3I	CTNAG	3 cut(s)	483, 614, 1625
HpySE526I	ACGT	3 cut(s)	345, 697, 1414
Hsp92I	GRCGYC	1 cut(s)	697
Hsp92II	CATG	7 cut(s)	256, 297, 367, 659, 773, 850, 961
KpnI	GGTACC	1 cut(s)	1086
Kzo9I	GATC	5 cut(s)	190, 262, 418, 1541, 1545
LguI	GCTCTTC	1 cut(s)	813
LmnI	GCTCC	7 cut(s)	505, 1188, 1204, 1243, 1400, 1453, 1459
Lsp1109I	GCAGC	6 cut(s)	520, 1099, 1102, 1121, 1328, 1656
LweI	GCATC	2 cut(s)	808, 1360
MaeI	CTAG	4 cut(s)	546, 1155, 1176, 1311
MaeII	ACGT	3 cut(s)	345, 697, 1414
MaeIII	GTNAC	2 cut(s)	658, 1022
MalI	GATC	5 cut(s)	192, 264, 420, 1543, 1547
MboI	GATC	5 cut(s)	190, 262, 418, 1541, 1545
MboII	GAAGA	6 cut(s)	434, 534, 595, 746, 800, 993
MhlI	GDGCHC	7 cut(s)	493, 808, 1018, 1174, 1193, 1450, 1626
MlsI	TGGCCA	1 cut(s)	654
MluCI	AATT	6 cut(s)	179, 922, 1050, 1063, 1566, 1651
MluI	ACGCGT	1 cut(s)	28
MluNI	TGGCCA	1 cut(s)	654
MlyI	GAGTC	1 cut(s)	938
MmeI	TCCRAC	4 cut(s)	508, 574, 1387, 1517
Mox20I	TGGCCA	1 cut(s)	654
MroXI	GAANNNNTTC	1 cut(s)	627
MscI	TGGCCA	1 cut(s)	654
MseI	TTAA	3 cut(s)	318, 776, 798
Msp20I	TGGCCA	1 cut(s)	654
MspA1I	CMGCKG	2 cut(s)	1112, 1319
MspI	CCGG	3 cut(s)	381, 828, 1146
MspR9I	CCNGG	5 cut(s)	391, 828, 1167, 1284, 1452
MvaI	CCWGG	4 cut(s)	391, 1167, 1284, 1452
MvnI	CGCG	1 cut(s)	30
MwoI	GCNNNNNNNGC	8 cut(s)	339, 488, 852, 1115, 1142, 1151, 1278, 1379
NciI	CCSGG	1 cut(s)	828
NdeI	CATATG	2 cut(s)	928, 1120
NdeII	GATC	5 cut(s)	190, 262, 418, 1541, 1545
NlaIII	CATG	7 cut(s)	256, 297, 367, 659, 773, 850, 961
NlaIV	GGNNCC	3 cut(s)	491, 1084, 1171
NspI	RCATGY	1 cut(s)	961
PagI	TCATGA	2 cut(s)	363, 769
PaqCI	CACCTGC	1 cut(s)	1303
PasI	CCCWGGG	1 cut(s)	390
PciSI	GCTCTTC	1 cut(s)	813
PdmI	GAANNNNTTC	1 cut(s)	627
PfeI	GAWTC	3 cut(s)	257, 644, 1502
PflFI	GACNNNGTC	1 cut(s)	374
PflMI	CCANNNNNTGG	1 cut(s)	995
PkrI	GCNGC	9 cut(s)	386, 510, 854, 1111, 1114, 1117, 1318, 1321, 1646
PleI	GAGTC	1 cut(s)	938
PpsI	GAGTC	1 cut(s)	938
PshAI	GACNNNNGTC	1 cut(s)	359
Psp124BI	GAGCTC	1 cut(s)	1193
Psp6I	CCWGG	4 cut(s)	389, 1165, 1282, 1450
PspFI	CCCAGC	2 cut(s)	1322, 1640
PspGI	CCWGG	4 cut(s)	389, 1165, 1282, 1450
PspN4I	GGNNCC	3 cut(s)	491, 1084, 1171
PspOMI	GGGCCC	1 cut(s)	489
PspPI	GGNCC	7 cut(s)	489, 490, 576, 1034, 1103, 1160, 1280
PstNI	CAGNNNCTG	3 cut(s)	1112, 1115, 1322
PsyI	GACNNNGTC	1 cut(s)	374
PvuII	CAGCTG	1 cut(s)	1112
RsaI	GTAC	8 cut(s)	33, 326, 691, 956, 1084, 1267, 1358, 1471
RsaNI	GTAC	8 cut(s)	32, 325, 690, 955, 1083, 1266, 1357, 1470
SacI	GAGCTC	1 cut(s)	1193
SapI	GCTCTTC	1 cut(s)	813
SaqAI	TTAA	3 cut(s)	318, 776, 798
SatI	GCNGC	9 cut(s)	385, 509, 853, 1110, 1113, 1116, 1317, 1320, 1645
Sau3AI	GATC	5 cut(s)	190, 262, 418, 1541, 1545
Sau96I	GGNCC	7 cut(s)	489, 490, 576, 1034, 1103, 1160, 1280
ScaI	AGTACT	3 cut(s)	326, 691, 1471
SchI	GAGTC	1 cut(s)	938
ScrFI	CCNGG	5 cut(s)	391, 828, 1167, 1284, 1452
SduI	GDGCHC	7 cut(s)	493, 808, 1018, 1174, 1193, 1450, 1626
SfaNI	GCATC	2 cut(s)	808, 1360
SinI	GGWCC	3 cut(s)	576, 1034, 1160
SmiI	ATTTAAAT	1 cut(s)	777
SmlI	CTYRAG	2 cut(s)	1194, 1335
SmoI	CTYRAG	2 cut(s)	1194, 1335
Sse9I	AATT	6 cut(s)	179, 922, 1050, 1063, 1566, 1651
SsiI	CCGC	8 cut(s)	250, 385, 802, 852, 855, 870, 1163, 1319
SspMI	CTAG	4 cut(s)	546, 1155, 1176, 1311
SstI	GAGCTC	1 cut(s)	1193
StyD4I	CCNGG	5 cut(s)	389, 826, 1165, 1282, 1450
StyI	CCWWGG	1 cut(s)	1241
SwaI	ATTTAAAT	1 cut(s)	777
TaaI	ACNGT	4 cut(s)	358, 475, 1361, 1484
TaiI	ACGT	3 cut(s)	348, 700, 1417
TaqI	TCGA	7 cut(s)	69, 88, 193, 417, 432, 462, 1544
TasI	AATT	6 cut(s)	179, 922, 1050, 1063, 1566, 1651
TatI	WGTACW	3 cut(s)	324, 689, 1469
TauI	GCSGC	3 cut(s)	387, 855, 1322
TfiI	GAWTC	3 cut(s)	257, 644, 1502
Tru1I	TTAA	3 cut(s)	318, 776, 798
Tru9I	TTAA	3 cut(s)	318, 776, 798
TscAI	CASTG	7 cut(s)	225, 241, 523, 736, 1264, 1279, 1366
TseI	GCWGC	6 cut(s)	508, 1109, 1112, 1115, 1316, 1644
TspDTI	ATGAA	5 cut(s)	191, 282, 711, 758, 915
TspGWI	ACGGA	3 cut(s)	9, 1377, 1382
TspRI	CASTG	7 cut(s)	225, 241, 523, 736, 1264, 1279, 1366
Tth111I	GACNNNGTC	1 cut(s)	374
Van91I	CCANNNNNTGG	1 cut(s)	995
VneI	GTGCAC	1 cut(s)	1014
VpaK11BI	GGWCC	3 cut(s)	576, 1034, 1160
XapI	RAATTY	1 cut(s)	922
XceI	RCATGY	1 cut(s)	961
XmnI	GAANNNNTTC	1 cut(s)	627
XspI	CTAG	4 cut(s)	546, 1155, 1176, 1311
ZraI	GACGTC	1 cut(s)	698
ZrmI	AGTACT	3 cut(s)	326, 691, 1471

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.