Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0002787

Physical Location & Seq

Genomic Coordinates Reverse (-)

32008924 .. 32011744

Gene Structure 2821 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1191700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1290 bp

ATGGACTCGGACGAAGGCAAGCTGTTCATAGGAGGACTGGCATGGGACACCAACGAGGACAAGCTCACCGATTACTTCAACCAGTACGGCGATGTCACCCAGACCGTAATCATGCGCGACAAGGTCACCGGCCGGCCCAGAGGCTTTGGCTTCGTCGTCTTCTCCGACCCCTCTCTGATCGACCGGGTTCTCAACGACAAGCACACCATTGACGGTCGACTGGTTGAGGCCAAACGGGCTATATCAAGAGAAGAACAACAGACATCCTATAGAACCGGAAACTTTAATACCACCAGGAGCTCTGGAGGGGGAGGAAATTTTAAGACCAAGAAAATATTTGTTGGTGGATTGCCTTCTACACTTACAGAAGATGGATTTCGTGAATTCTTTGAAAATTATGGCACCGTGACTGATGTAGTAATAATGTATGACCAAAATACTCAACGACCTCGTGGTTTTGGTTTCATAACATTTGACACTGAAGATGCAGTTGATGGAGTACTACAAAAGAACTACCATGAGTTGAATGGTAAACTTGTAGAGGTAAAGCGAGCACTTCCTAAAGATGCAAATCCTGGTGGTGGGGGCCGGGGTGGGGGATATCAAGGTTACAGTGCCTCTGGGGCCAGTACAAATGCATTTGATGGTCGAATTGATGGCAGTAGATATGTGCAGCCTCAAATTACAGCAGGTGGTTTCCCTCCATATTCTGGTTATGGTGCACCGGGTTATGGTTATGGGCCGGCAAATACAGGGGTTGGTTATGGAAGTTATGGTCTTGGTGGTTATGGAAGTGCCAATACTGGTTTTGGTGGTCCTGCAGGATCGTATGGGAATCCAAATGCCCCTAATGCTGGCTATGTTAGTGGGGTACCTGGTGCGTTGAAAAATACTTGGAGCAACCAAACTCCTGGGTATGTTGCTACTGGCTATGGGGCTGCAGCTCCTTGGAGTACTCCTGGTGGAACTGGTGTTCCTTCTGCTCCTAGGGGTCAATCACCAAGTGGGGCTTCTGGTTATGGAAATCAAGGTTATGGTTATGGAAATTATGGCGGGAGTTACGCTTCTTATCCTGGTGGGTATGGGACCTCTGGCGGGCGTGGTGGAAGTACCCCAACAAGCAACTCAGGTAGTGCTAACGGTGGAGAGCAACAAGGGACTCGTCGTGGTTACATGGGGAGCGGCTATGACAACACCAATGGTAATTCAGGGTACTCTAATGCATCGTGGAGATCTGACCCTTCACAGGCCACCGGTGGCTATGGTGGTTCTCAGTCCAGGCAGGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0008187 GO:0008266 GO:0031974 GO:0031981 GO:0032991 GO:0034046 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0070013 GO:0070717 GO:0097159 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

RRM_1

Protein Analysis

430

Amino Acids

44.53

Weight (kDa)

7.69

Isoelectric Point (pI)

22.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_7	PF16367	7 - 69	4.5e-06	RNA recognition motif
RRM_1	PF00076	8 - 74	5.4e-15	RNA recognition motif
RRM_7	PF16367	110 - 178	2.1e-06	RNA recognition motif
RRM_1	PF00076	112 - 179	5e-17	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002787)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14300 AT4G14300
fragaria_vesca	FvH4_2g20810 FvH4_4g04320 FvH4_4g04320 FvH4_4g04320 FvH4_4g04320
malus_domestica	MD05G1191700.v1.1 MD13G1219200.v1.1 MD16G1224500.v1.1
prunus_persica	Prupe.1G045900_v2.0.a1 Prupe.1G045900_v2.0.a1 Prupe.8G218100_v2.0.a1
pyrus_communis	pycom05g17830 pycom05g17870 pycom10g15490 pycom13g19410 pycom16g18790
rosa_chinensis	RchiOBHm_Chr4g0394771 RchiOBHm_Chr6g0287221
rosa_laevigata	RLG00000009663 RLG00000012517
rosa_multiflora	Rmu_sc0005297.1_g000024 Rmu_sc0005356.1_g000004
rosa_roxburghii	Rroxscaffold_5G00339810 Rroxscaffold_7G00181660
rosa_rugosa	Rorug03G0361600.1 Rorug06G0185900
rosa_samantha	Rh4AG055000 Rh4BG052900 Rh4CG059700 Rh4DG051400 Rh6AG297400 Rh6BG302800 Rh6CG307300 Rh6CG310700 Rh6DG294400
rosa_wichuraiana	Rw4G004390 Rw6G025690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	680
Acc36I	ACCTGC	1 cut(s)	680
Acc65I	GGTACC	1 cut(s)	871
AccB1I	GGYRCC	2 cut(s)	401, 871
AccB7I	CCANNNNNTGG	1 cut(s)	710
AccBSI	CCGCTC	1 cut(s)	1182
AccI	GTMKAC	1 cut(s)	217
AccII	CGCG	1 cut(s)	117
AciI	CCGC	3 cut(s)	1053, 1095, 1182
AclWI	GGATC	1 cut(s)	832
AcoI	YGGCCR	1 cut(s)	130
AcsI	RAATTY	2 cut(s)	316, 383
AcuI	CTGAAG	1 cut(s)	501
AdeI	CACNNNGTG	1 cut(s)	1004
AfaI	GTAC	7 cut(s)	86, 501, 631, 873, 955, 1111, 1214
AfiI	CCNNNNNNNGG	7 cut(s)	581, 595, 710, 731, 854, 1095, 1246
AgeI	ACCGGT	1 cut(s)	1253
AgsI	TTSAA	4 cut(s)	79, 392, 526, 886
AjnI	CCWGG	7 cut(s)	293, 574, 874, 910, 958, 1072, 1277
AjuI	GAANNNNNNNTTGG	2 cut(s)	994, 1026
AloI	GAACNNNNNNTCC	4 cut(s)	957, 958, 989, 990
AluBI	AGCT	4 cut(s)	22, 64, 300, 944
AluI	AGCT	4 cut(s)	22, 64, 300, 944
Alw21I	GWGCWC	3 cut(s)	302, 556, 724
Alw44I	GTGCAC	1 cut(s)	720
AlwI	GGATC	1 cut(s)	832
AoxI	GGCC	8 cut(s)	130, 134, 228, 586, 624, 740, 1248, 1284
ApaLI	GTGCAC	1 cut(s)	720
ApeKI	GCWGC	3 cut(s)	673, 938, 941
ApoI	RAATTY	2 cut(s)	316, 383
AsiGI	ACCGGT	1 cut(s)	1253
Asp718I	GGTACC	1 cut(s)	871
AspA2I	CCTAGG	1 cut(s)	986
AspLEI	GCGC	1 cut(s)	117
AspS9I	GGNCC	6 cut(s)	135, 586, 624, 740, 815, 1086
AsuC2I	CCSGG	3 cut(s)	185, 590, 726
AsuHPI	GGTGA	4 cut(s)	58, 88, 118, 990
AvaII	GGWCC	2 cut(s)	815, 1086
AvrII	CCTAGG	1 cut(s)	986
BaeGI	GKGCMC	1 cut(s)	724
BanI	GGYRCC	2 cut(s)	401, 871
BanII	GRGCYC	1 cut(s)	302
BarI	GAAGNNNNNNTAC	2 cut(s)	784, 816
BauI	CACGAG	1 cut(s)	450
BbsI	GAAGAC	1 cut(s)	151
Bbv12I	GWGCWC	3 cut(s)	302, 556, 724
BbvI	GCAGC	3 cut(s)	685, 925, 953
BccI	CCATC	4 cut(s)	365, 488, 638, 650
BceAI	ACGGC	1 cut(s)	103
BciT130I	CCWGG	7 cut(s)	295, 576, 876, 912, 960, 1074, 1279
BcnI	CCSGG	3 cut(s)	185, 590, 726
BfaI	CTAG	1 cut(s)	987
BfmI	CTRYAG	3 cut(s)	268, 819, 939
BfuAI	ACCTGC	1 cut(s)	680
BglI	GCCNNNNNGGC	2 cut(s)	236, 623
BglII	AGATCT	1 cut(s)	1232
BisI	GCNGC	4 cut(s)	674, 939, 942, 1183
BlnI	CCTAGG	1 cut(s)	986
BlsI	GCNGC	4 cut(s)	675, 940, 943, 1184
BmcAI	AGTACT	2 cut(s)	501, 955
Bme18I	GGWCC	2 cut(s)	815, 1086
BmgT120I	GGNCC	6 cut(s)	135, 586, 624, 740, 815, 1086
BmiI	GGNNCC	5 cut(s)	403, 587, 625, 873, 1087
BmsI	GCATC	3 cut(s)	475, 556, 1232
BpiI	GAAGAC	1 cut(s)	151
BpmI	CTGGAG	1 cut(s)	324
BpuMI	CCSGG	3 cut(s)	185, 590, 726
BsaBI	GATNNNNATC	1 cut(s)	570
BsaJI	CCNNGG	4 cut(s)	589, 911, 947, 986
BsaWI	WCCGGW	2 cut(s)	275, 1253
Bsc4I	CCNNNNNNNGG	7 cut(s)	581, 595, 710, 731, 854, 1095, 1246
Bse118I	RCCGGY	4 cut(s)	128, 132, 742, 1253
Bse1I	ACTGG	7 cut(s)	42, 82, 225, 627, 808, 931, 973
Bse8I	GATNNNNATC	1 cut(s)	570
BseBI	CCWGG	7 cut(s)	295, 576, 876, 912, 960, 1074, 1279
BseDI	CCNNGG	4 cut(s)	589, 911, 947, 986
BseGI	GGATG	1 cut(s)	263
BseJI	GATNNNNATC	1 cut(s)	570
BseLI	CCNNNNNNNGG	7 cut(s)	581, 595, 710, 731, 854, 1095, 1246
BseMII	CTCAG	2 cut(s)	1140, 1286
BseNI	ACTGG	7 cut(s)	42, 82, 225, 627, 808, 931, 973
BseSI	GKGCMC	1 cut(s)	724
BseX3I	CGGCCG	1 cut(s)	130
BseXI	GCAGC	3 cut(s)	685, 925, 953
BsgI	GTGCAG	1 cut(s)	692
Bsh1236I	CGCG	1 cut(s)	117
Bsh1285I	CGRYCG	3 cut(s)	133, 184, 217
BshFI	GGCC	8 cut(s)	132, 136, 230, 588, 626, 742, 1250, 1286
BshNI	GGYRCC	2 cut(s)	401, 871
BshTI	ACCGGT	1 cut(s)	1253
BsiEI	CGRYCG	3 cut(s)	133, 184, 217
BsiHKAI	GWGCWC	3 cut(s)	302, 556, 724
BsiSI	CCGG	8 cut(s)	129, 133, 184, 276, 589, 725, 743, 1254
BslFI	GGGAC	3 cut(s)	59, 1099, 1171
BslI	CCNNNNNNNGG	7 cut(s)	581, 595, 710, 731, 854, 1095, 1246
BsmFI	GGGAC	3 cut(s)	59, 1099, 1171
BsnI	GGCC	8 cut(s)	132, 136, 230, 588, 626, 742, 1250, 1286
Bsp1286I	GDGCHC	3 cut(s)	302, 556, 724
Bsp143I	GATC	3 cut(s)	177, 824, 1232
BspACI	CCGC	3 cut(s)	1053, 1095, 1182
BspANI	GGCC	8 cut(s)	132, 136, 230, 588, 626, 742, 1250, 1286
BspCNI	CTCAG	2 cut(s)	1139, 1285
BspFNI	CGCG	1 cut(s)	117
BspLI	GGNNCC	5 cut(s)	403, 587, 625, 873, 1087
BspMAI	CTGCAG	2 cut(s)	823, 943
BspMI	ACCTGC	1 cut(s)	680
BspPI	GGATC	1 cut(s)	832
BspT107I	GGYRCC	2 cut(s)	401, 871
BsrBI	CCGCTC	1 cut(s)	1182
BsrFI	RCCGGY	4 cut(s)	128, 132, 742, 1253
BsrI	ACTGG	7 cut(s)	42, 82, 225, 627, 808, 931, 973
BssAI	RCCGGY	4 cut(s)	128, 132, 742, 1253
BssECI	CCNNGG	4 cut(s)	589, 911, 947, 986
BssMI	GATC	3 cut(s)	177, 824, 1232
BssSI	CACGAG	1 cut(s)	450
BssT1I	CCWWGG	2 cut(s)	947, 986
Bst2BI	CACGAG	1 cut(s)	450
Bst2UI	CCWGG	7 cut(s)	295, 576, 876, 912, 960, 1074, 1279
Bst4CI	ACNGT	5 cut(s)	106, 215, 406, 614, 1142
BstC8I	GCNNGC	7 cut(s)	20, 134, 552, 744, 856, 1097, 1284
BstDEI	CTNAG	2 cut(s)	1126, 1272
BstEII	GGTNACC	1 cut(s)	124
BstF5I	GGATG	1 cut(s)	263
BstFNI	CGCG	1 cut(s)	117
BstHHI	GCGC	1 cut(s)	117
BstKTI	GATC	3 cut(s)	180, 827, 1235
BstMBI	GATC	3 cut(s)	177, 824, 1232
BstMCI	CGRYCG	3 cut(s)	133, 184, 217
BstMWI	GCNNNNNNNGC	3 cut(s)	236, 623, 851
BstNI	CCWGG	7 cut(s)	295, 576, 876, 912, 960, 1074, 1279
BstPI	GGTNACC	1 cut(s)	124
BstSFI	CTRYAG	3 cut(s)	268, 819, 939
BstSLI	GKGCMC	1 cut(s)	724
BstUI	CGCG	1 cut(s)	117
BstV1I	GCAGC	3 cut(s)	685, 925, 953
BstV2I	GAAGAC	1 cut(s)	151
BstX2I	RGATCY	1 cut(s)	1232
BstXI	CCANNNNNNTGG	1 cut(s)	911
BstYI	RGATCY	1 cut(s)	1232
BstZI	CGGCCG	1 cut(s)	130
BsuRI	GGCC	8 cut(s)	132, 136, 230, 588, 626, 742, 1250, 1286
BtgZI	GCGATG	1 cut(s)	105
BtsCI	GGATG	1 cut(s)	263
BtsIMutI	CAGTG	2 cut(s)	477, 619
BveI	ACCTGC	1 cut(s)	680
Cac8I	GCNNGC	7 cut(s)	20, 134, 552, 744, 856, 1097, 1284
CfoI	GCGC	1 cut(s)	117
Cfr10I	RCCGGY	4 cut(s)	128, 132, 742, 1253
Cfr13I	GGNCC	6 cut(s)	135, 586, 624, 740, 815, 1086
CsiI	ACCWGGT	1 cut(s)	874
Csp6I	GTAC	7 cut(s)	85, 500, 630, 872, 954, 1110, 1213
CspAI	ACCGGT	1 cut(s)	1253
CviAII	CATG	4 cut(s)	42, 112, 518, 1174
CviQI	GTAC	7 cut(s)	85, 500, 630, 872, 954, 1110, 1213
DdeI	CTNAG	2 cut(s)	1126, 1272
DpnI	GATC	3 cut(s)	179, 826, 1234
DpnII	GATC	3 cut(s)	177, 824, 1232
DraIII	CACNNNGTG	1 cut(s)	1004
EaeI	YGGCCR	1 cut(s)	130
EagI	CGGCCG	1 cut(s)	130
Ecl136II	GAGCTC	1 cut(s)	300
EclXI	CGGCCG	1 cut(s)	130
Eco130I	CCWWGG	2 cut(s)	947, 986
Eco147I	AGGCCT	1 cut(s)	1286
Eco24I	GRGCYC	1 cut(s)	302
Eco32I	GATATC	1 cut(s)	602
Eco47I	GGWCC	2 cut(s)	815, 1086
Eco52I	CGGCCG	1 cut(s)	130
Eco53kI	GAGCTC	1 cut(s)	300
Eco57I	CTGAAG	1 cut(s)	501
Eco91I	GGTNACC	1 cut(s)	124
EcoICRI	GAGCTC	1 cut(s)	300
EcoO109I	RGGNCCY	1 cut(s)	1086
EcoO65I	GGTNACC	1 cut(s)	124
EcoRI	GAATTC	1 cut(s)	383
EcoRII	CCWGG	7 cut(s)	293, 574, 874, 910, 958, 1072, 1277
EcoRV	GATATC	1 cut(s)	602
EcoT14I	CCWWGG	2 cut(s)	947, 986
EcoT22I	ATGCAT	2 cut(s)	640, 1225
EcoT38I	GRGCYC	1 cut(s)	302
ErhI	CCWWGG	2 cut(s)	947, 986
FaeI	CATG	4 cut(s)	45, 115, 521, 1177
FalI	AAGNNNNNCTT	2 cut(s)	994, 1026
FaqI	GGGAC	3 cut(s)	59, 1099, 1171
FatI	CATG	4 cut(s)	41, 111, 517, 1173
FauI	CCCGC	2 cut(s)	1046, 1088
FblI	GTMKAC	1 cut(s)	217
Fnu4HI	GCNGC	4 cut(s)	674, 939, 942, 1183
FokI	GGATG	1 cut(s)	250
FriOI	GRGCYC	1 cut(s)	302
FseI	GGCCGGCC	1 cut(s)	136
Fsp4HI	GCNGC	4 cut(s)	674, 939, 942, 1183
FspBI	CTAG	1 cut(s)	987
GlaI	GCGC	1 cut(s)	116
GluI	GCNGC	4 cut(s)	674, 939, 942, 1183
GsuI	CTGGAG	1 cut(s)	324
HaeIII	GGCC	8 cut(s)	132, 136, 230, 588, 626, 742, 1250, 1286
HapII	CCGG	8 cut(s)	129, 133, 184, 276, 589, 725, 743, 1254
HhaI	GCGC	1 cut(s)	117
Hin1II	CATG	4 cut(s)	45, 115, 521, 1177
Hin6I	GCGC	1 cut(s)	115
HinP1I	GCGC	1 cut(s)	115
HincII	GTYRAC	1 cut(s)	218
HindII	GTYRAC	1 cut(s)	218
HinfI	GANTC	3 cut(s)	5, 835, 1159
HpaII	CCGG	8 cut(s)	129, 133, 184, 276, 589, 725, 743, 1254
HphI	GGTGA	4 cut(s)	58, 88, 118, 990
Hpy166II	GTNNAC	3 cut(s)	218, 533, 722
Hpy188I	TCNGA	4 cut(s)	10, 166, 177, 1237
Hpy188III	TCNNGA	3 cut(s)	246, 303, 380
Hpy8I	GTNNAC	3 cut(s)	218, 533, 722
Hpy99I	CGWCG	2 cut(s)	158, 1167
HpyAV	CCTTC	4 cut(s)	8, 363, 987, 1251
HpyCH4III	ACNGT	5 cut(s)	106, 215, 406, 614, 1142
HpyCH4V	TGCA	8 cut(s)	488, 569, 638, 673, 722, 821, 941, 1223
HpyF10VI	GCNNNNNNNGC	3 cut(s)	236, 623, 851
HpyF3I	CTNAG	2 cut(s)	1126, 1272
Hsp92II	CATG	4 cut(s)	45, 115, 521, 1177
HspAI	GCGC	1 cut(s)	115
KpnI	GGTACC	1 cut(s)	875
KroI	GCCGGC	2 cut(s)	132, 742
KroNI	GCCGGC	2 cut(s)	134, 744
Kzo9I	GATC	3 cut(s)	177, 824, 1232
LmnI	GCTCC	5 cut(s)	297, 897, 949, 988, 1179
Lsp1109I	GCAGC	3 cut(s)	685, 925, 953
LweI	GCATC	3 cut(s)	475, 556, 1232
MabI	ACCWGGT	1 cut(s)	874
MaeI	CTAG	1 cut(s)	987
MaeIII	GTNAC	6 cut(s)	94, 124, 406, 608, 1058, 1169
MalI	GATC	3 cut(s)	179, 826, 1234
MbiI	CCGCTC	1 cut(s)	1182
MboI	GATC	3 cut(s)	177, 824, 1232
MboII	GAAGA	4 cut(s)	151, 263, 380, 494
MflI	RGATCY	1 cut(s)	1232
MhlI	GDGCHC	3 cut(s)	302, 556, 724
MluCI	AATT	7 cut(s)	316, 383, 394, 651, 681, 1045, 1204
MlyI	GAGTC	1 cut(s)	1153
MmeI	TCCRAC	1 cut(s)	189
Mph1103I	ATGCAT	2 cut(s)	640, 1225
MroNI	GCCGGC	2 cut(s)	132, 742
MseI	TTAA	2 cut(s)	285, 321
MspI	CCGG	8 cut(s)	129, 133, 184, 276, 589, 725, 743, 1254
MvaI	CCWGG	7 cut(s)	295, 576, 876, 912, 960, 1074, 1279
MvnI	CGCG	1 cut(s)	117
MwoI	GCNNNNNNNGC	3 cut(s)	236, 623, 851
NaeI	GCCGGC	2 cut(s)	134, 744
NciI	CCSGG	3 cut(s)	185, 590, 726
NdeII	GATC	3 cut(s)	177, 824, 1232
NgoMIV	GCCGGC	2 cut(s)	132, 742
NlaIII	CATG	4 cut(s)	45, 115, 521, 1177
NlaIV	GGNNCC	5 cut(s)	403, 587, 625, 873, 1087
NmuCI	GTSAC	3 cut(s)	94, 124, 406
NsiI	ATGCAT	2 cut(s)	640, 1225
PaqCI	CACCTGC	1 cut(s)	680
PceI	AGGCCT	1 cut(s)	1286
PcsI	WCGNNNNNNNCGW	1 cut(s)	162
PdiI	GCCGGC	2 cut(s)	134, 744
PfeI	GAWTC	1 cut(s)	835
PflFI	GACNNNGTC	1 cut(s)	122
PflMI	CCANNNNNTGG	1 cut(s)	710
PinAI	ACCGGT	1 cut(s)	1253
PkrI	GCNGC	4 cut(s)	675, 940, 943, 1184
PleI	GAGTC	1 cut(s)	1153
PpsI	GAGTC	1 cut(s)	1153
PpuMI	RGGWCCY	1 cut(s)	1086
Psp124BI	GAGCTC	1 cut(s)	302
Psp5II	RGGWCCY	1 cut(s)	1086
Psp6I	CCWGG	7 cut(s)	293, 574, 874, 910, 958, 1072, 1277
PspEI	GGTNACC	1 cut(s)	124
PspGI	CCWGG	7 cut(s)	293, 574, 874, 910, 958, 1072, 1277
PspN4I	GGNNCC	5 cut(s)	403, 587, 625, 873, 1087
PspPI	GGNCC	6 cut(s)	135, 586, 624, 740, 815, 1086
PspPPI	RGGWCCY	1 cut(s)	1086
PstI	CTGCAG	2 cut(s)	823, 943
PsuI	RGATCY	1 cut(s)	1232
PsyI	GACNNNGTC	1 cut(s)	122
RigI	GGCCGGCC	1 cut(s)	136
RsaI	GTAC	7 cut(s)	86, 501, 631, 873, 955, 1111, 1214
RsaNI	GTAC	7 cut(s)	85, 500, 630, 872, 954, 1110, 1213
SacI	GAGCTC	1 cut(s)	302
SalI	GTCGAC	1 cut(s)	216
SaqAI	TTAA	2 cut(s)	285, 321
SatI	GCNGC	4 cut(s)	674, 939, 942, 1183
Sau3AI	GATC	3 cut(s)	177, 824, 1232
Sau96I	GGNCC	6 cut(s)	135, 586, 624, 740, 815, 1086
SbfI	CCTGCAGG	1 cut(s)	823
ScaI	AGTACT	2 cut(s)	501, 955
SchI	GAGTC	1 cut(s)	1153
SdaI	CCTGCAGG	1 cut(s)	823
SduI	GDGCHC	3 cut(s)	302, 556, 724
SexAI	ACCWGGT	1 cut(s)	874
SfaNI	GCATC	3 cut(s)	475, 556, 1232
SfcI	CTRYAG	3 cut(s)	268, 819, 939
SgrAI	CRCCGGYG	1 cut(s)	1253
SinI	GGWCC	2 cut(s)	815, 1086
Sse8387I	CCTGCAGG	1 cut(s)	823
Sse9I	AATT	7 cut(s)	316, 383, 394, 651, 681, 1045, 1204
SseBI	AGGCCT	1 cut(s)	1286
SsiI	CCGC	3 cut(s)	1053, 1095, 1182
SspI	AATATT	1 cut(s)	336
SspMI	CTAG	1 cut(s)	987
SstI	GAGCTC	1 cut(s)	302
StuI	AGGCCT	1 cut(s)	1286
StyI	CCWWGG	2 cut(s)	947, 986
TaaI	ACNGT	5 cut(s)	106, 215, 406, 614, 1142
TaqI	TCGA	3 cut(s)	180, 217, 649
TasI	AATT	7 cut(s)	316, 383, 394, 651, 681, 1045, 1204
TatI	WGTACW	3 cut(s)	499, 629, 953
TauI	GCSGC	1 cut(s)	1185
TfiI	GAWTC	1 cut(s)	835
Tru1I	TTAA	2 cut(s)	285, 321
Tru9I	TTAA	2 cut(s)	285, 321
TscAI	CASTG	2 cut(s)	484, 619
TseFI	GTSAC	3 cut(s)	94, 124, 406
TseI	GCWGC	3 cut(s)	673, 938, 941
Tsp45I	GTSAC	3 cut(s)	94, 124, 406
TspDTI	ATGAA	2 cut(s)	16, 454
TspRI	CASTG	2 cut(s)	484, 619
Tth111I	GACNNNGTC	1 cut(s)	122
Van91I	CCANNNNNTGG	1 cut(s)	710
VneI	GTGCAC	1 cut(s)	720
VpaK11BI	GGWCC	2 cut(s)	815, 1086
XapI	RAATTY	2 cut(s)	316, 383
XcmI	CCANNNNNNNNNTGG	1 cut(s)	524
XmaJI	CCTAGG	1 cut(s)	986
XmiI	GTMKAC	1 cut(s)	217
XspI	CTAG	1 cut(s)	987
ZrmI	AGTACT	2 cut(s)	501, 955
Zsp2I	ATGCAT	2 cut(s)	640, 1225

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.