Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002787

Physical Location & Seq

Genomic Coordinates Forward (+)

50582621 .. 50585889

Gene Structure 3269 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ25763

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1290 bp

ATGGACTCCGACGAGAGCAAGCTCTTCATAGGCGGACTAGCCTGGGACACCACCGAGGAGAAGCTCACCGAATACTTCAACCAGTACGGTGACGTCAGCCAGTCCGTCATCATGCGCGACAAGACCACCGGCCGCCCCCGCGGCTTCGGCTTCGTCGTCTTCTCTGATCCTGCCGTCCTCGACAGGGTCCTCAACGAAAAGCACACCATCGACGGCCGAGCGCTTGTGGAAGCAAAGAAGGCTTTATCAAGAGAAGAACAGCAAACATCCAATAGAACTGGAAATTTTAACGCCACTAGAAGCTCTGGAGGTGGAGGAAATTTTAAGACCAAGAAAATATTTGTTGGAGGATTGCCTTCCACACTGACAGAAGACGGATTTCGTCAATTCTTTGAGGAGTACGGCAGTGTTACTGATGTAGTAATAATGTATGACCAGAATACTCAACGACCTCGAGGATTTGGTTTCATTACATTTGACACTGAAGATGCAGTTGATAGAGTACTACAAAAGAACTTCCATGAGTTGAATGGTAAACTTGTAGAAGTAAAACGAGCGCTTCCCAAAGATGCAAACCCTGGCGGTGGAGGTCGTGGTGGGGGCTATCAAGGTTATAGTGCCTCTGGTGCCAGTTCCAATGCGTTTGATGGCCGAATGGATGGCAATAGATATATGCAGCCTCAGTCTACGGCAGGTGGTTTCCCTCCATATTCTGGTTATGGCGCCGCAGGTTATGGTTACAGTGGGAATACTGGTGTTGGTTATGGAGGTTATGGAAGTTACGGTGTTGGTGGTTATGGAAGTGCCAATTCTGGTTTTGGTGGCCCTGCAGGATCATATGGAAATCCAAATGCTCCTAATGCTGGTTATGTTGGTGGGGCACCCGGTGCCTTGAAAAATGCTTGGAGCAGCCAAAGTCCCTCTGGCTATGGTGCTTCAGGCTATGGGGCTGCAGCTTCTTGGGCTGCTCCAGGTGGAAGTGCTCCTTCTGCTCCCAGAGGTCAATCCCCTAGTGGGGTTTCTGGTTATGGAAATCAAGGTTACGGGTATGGCAATTATGGAGGAAGTTACGGTTCTTATCCTGGTGTGTATGGGACTTCTGGTGGACGTGGTGGAAGTACCCCAACTAGCAACAGTGGTGGTGGAGACCAACAAGGAACGCGAGGTGGCTACATGGGAAGTGTGTATGGCGACACAAATGGAAATGCAGGATACTCTAATGCATCATGGAGAGCAGACCCTTCACAAGCCAGCGGTGGTTATGGTAGTTCTCAGTCCAGGCAGACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0008187 GO:0008266 GO:0031974 GO:0031981 GO:0032991 GO:0034046 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0070013 GO:0070717 GO:0097159 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

RRM_1

Protein Analysis

429

Amino Acids

44.18

Weight (kDa)

7.7

Isoelectric Point (pI)

29.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_7	PF16367	6 - 75	1.5e-06	RNA recognition motif
RRM_1	PF00076	8 - 73	1.2e-15	RNA recognition motif
RRM_7	PF16367	111 - 178	1e-06	RNA recognition motif
RRM_1	PF00076	113 - 180	4.5e-18	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002787)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14300 AT4G14300
fragaria_vesca	FvH4_2g20810 FvH4_4g04320 FvH4_4g04320 FvH4_4g04320 FvH4_4g04320
malus_domestica	MD05G1191700.v1.1 MD13G1219200.v1.1 MD16G1224500.v1.1
prunus_persica	Prupe.1G045900_v2.0.a1 Prupe.1G045900_v2.0.a1 Prupe.8G218100_v2.0.a1
pyrus_communis	pycom05g17830 pycom05g17870 pycom10g15490 pycom13g19410 pycom16g18790
rosa_chinensis	RchiOBHm_Chr4g0394771 RchiOBHm_Chr6g0287221
rosa_laevigata	RLG00000009663 RLG00000012517
rosa_multiflora	Rmu_sc0005297.1_g000024 Rmu_sc0005356.1_g000004
rosa_roxburghii	Rroxscaffold_5G00339810 Rroxscaffold_7G00181660
rosa_rugosa	Rorug03G0361600.1 Rorug06G0185900
rosa_samantha	Rh4AG055000 Rh4BG052900 Rh4CG059700 Rh4DG051400 Rh6AG297400 Rh6BG302800 Rh6CG307300 Rh6CG310700 Rh6DG294400
rosa_wichuraiana	Rw4G004390 Rw6G025690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	683
AatII	GACGTC	1 cut(s)	96
AbsI	CCTCGAGG	1 cut(s)	453
Acc36I	ACCTGC	2 cut(s)	683, 719
AccB1I	GGYRCC	4 cut(s)	626, 722, 880, 887
AccB7I	CCANNNNNTGG	1 cut(s)	713
AccI	GTMKAC	1 cut(s)	686
AccII	CGCG	3 cut(s)	117, 141, 1162
AciI	CCGC	7 cut(s)	33, 133, 139, 141, 582, 726, 1254
AclWI	GGATC	2 cut(s)	161, 841
AcoI	YGGCCR	3 cut(s)	130, 214, 649
AcsI	RAATTY	2 cut(s)	283, 319
AcuI	CTGAAG	2 cut(s)	504, 921
AcyI	GRCGYC	2 cut(s)	93, 723
AdeI	CACNNNGTG	1 cut(s)	887
AfaI	GTAC	4 cut(s)	86, 401, 504, 1120
AfeI	AGCGCT	2 cut(s)	222, 558
AfiI	CCNNNNNNNGG	6 cut(s)	184, 584, 713, 863, 1014, 1015
AgsI	TTSAA	3 cut(s)	79, 529, 895
AjiI	CACGTC	1 cut(s)	1109
AjnI	CCWGG	5 cut(s)	41, 577, 970, 1081, 1277
AluBI	AGCT	4 cut(s)	22, 64, 303, 956
AluI	AGCT	4 cut(s)	22, 64, 303, 956
Alw21I	GWGCWC	1 cut(s)	985
Alw26I	GTCTC	1 cut(s)	1140
AlwI	GGATC	2 cut(s)	161, 841
Ama87I	CYCGRG	1 cut(s)	453
Aor51HI	AGCGCT	2 cut(s)	222, 558
AoxI	GGCC	4 cut(s)	130, 214, 649, 823
ApeKI	GCWGC	5 cut(s)	676, 909, 950, 953, 965
ApoI	RAATTY	2 cut(s)	283, 319
AspLEI	GCGC	4 cut(s)	117, 223, 559, 725
AspS9I	GGNCC	2 cut(s)	187, 824
AsuC2I	CCSGG	1 cut(s)	885
AsuHPI	GGTGA	2 cut(s)	58, 101
AvaI	CYCGRG	1 cut(s)	453
AvaII	GGWCC	1 cut(s)	187
BaeGI	GKGCMC	1 cut(s)	883
BanI	GGYRCC	4 cut(s)	626, 722, 880, 887
BbsI	GAAGAC	2 cut(s)	151, 378
Bbv12I	GWGCWC	1 cut(s)	985
BbvI	GCAGC	5 cut(s)	688, 921, 937, 952, 965
BccI	CCATC	3 cut(s)	215, 641, 653
BceAI	ACGGC	4 cut(s)	158, 229, 418, 705
BciT130I	CCWGG	5 cut(s)	43, 579, 972, 1083, 1279
BciVI	GTATCC	1 cut(s)	1205
BcnI	CCSGG	1 cut(s)	885
BcoDI	GTCTC	1 cut(s)	1140
BfaI	CTAG	4 cut(s)	38, 297, 1011, 1128
BfmI	CTRYAG	2 cut(s)	828, 951
BfoI	RGCGCY	3 cut(s)	224, 560, 726
BfuAI	ACCTGC	2 cut(s)	683, 719
BfuI	GTATCC	1 cut(s)	1205
BglI	GCCNNNNNGGC	1 cut(s)	141
BisI	GCNGC	8 cut(s)	133, 142, 677, 726, 910, 951, 954, 966
BlsI	GCNGC	8 cut(s)	134, 143, 678, 727, 911, 952, 955, 967
BmcAI	AGTACT	1 cut(s)	504
Bme1390I	CCNGG	6 cut(s)	43, 579, 885, 972, 1083, 1279
Bme18I	GGWCC	1 cut(s)	187
BmeT110I	CYCGRG	1 cut(s)	453
BmgBI	CACGTC	1 cut(s)	1109
BmgT120I	GGNCC	2 cut(s)	187, 824
BmiI	GGNNCC	5 cut(s)	188, 628, 724, 882, 889
BmrFI	CCNGG	6 cut(s)	43, 579, 885, 972, 1083, 1279
BmsI	GCATC	3 cut(s)	478, 559, 1232
BpiI	GAAGAC	2 cut(s)	151, 378
BpmI	CTGGAG	2 cut(s)	327, 954
BpuMI	CCSGG	1 cut(s)	885
BsaHI	GRCGYC	2 cut(s)	93, 723
BsaI	GGTCTC	1 cut(s)	1140
BsaJI	CCNNGG	4 cut(s)	42, 54, 139, 577
Bsc4I	CCNNNNNNNGG	6 cut(s)	184, 584, 713, 863, 1014, 1015
Bse118I	RCCGGY	1 cut(s)	128
Bse1I	ACTGG	5 cut(s)	82, 100, 283, 630, 757
BseBI	CCWGG	5 cut(s)	43, 579, 972, 1083, 1279
BseDI	CCNNGG	4 cut(s)	42, 54, 139, 577
BseGI	GGATG	2 cut(s)	266, 664
BseLI	CCNNNNNNNGG	6 cut(s)	184, 584, 713, 863, 1014, 1015
BseMII	CTCAG	2 cut(s)	695, 1286
BseNI	ACTGG	5 cut(s)	82, 100, 283, 630, 757
BseRI	GAGGAG	2 cut(s)	71, 410
BseSI	GKGCMC	1 cut(s)	883
BseX3I	CGGCCG	2 cut(s)	130, 214
BseXI	GCAGC	5 cut(s)	688, 921, 937, 952, 965
Bsh1236I	CGCG	3 cut(s)	117, 141, 1162
Bsh1285I	CGRYCG	2 cut(s)	133, 217
BshFI	GGCC	4 cut(s)	132, 216, 651, 825
BshNI	GGYRCC	4 cut(s)	626, 722, 880, 887
BsiEI	CGRYCG	2 cut(s)	133, 217
BsiHKAI	GWGCWC	1 cut(s)	985
BsiHKCI	CYCGRG	1 cut(s)	453
BsiSI	CCGG	2 cut(s)	129, 885
BslFI	GGGAC	3 cut(s)	59, 903, 1108
BslI	CCNNNNNNNGG	6 cut(s)	184, 584, 713, 863, 1014, 1015
BsmAI	GTCTC	1 cut(s)	1140
BsmFI	GGGAC	3 cut(s)	59, 903, 1108
BsnI	GGCC	4 cut(s)	132, 216, 651, 825
Bso31I	GGTCTC	1 cut(s)	1140
BsoBI	CYCGRG	1 cut(s)	453
Bsp1286I	GDGCHC	2 cut(s)	883, 985
Bsp143I	GATC	2 cut(s)	166, 833
BspACI	CCGC	7 cut(s)	33, 133, 139, 141, 582, 726, 1254
BspANI	GGCC	4 cut(s)	132, 216, 651, 825
BspCNI	CTCAG	2 cut(s)	694, 1285
BspFNI	CGCG	3 cut(s)	117, 141, 1162
BspLI	GGNNCC	5 cut(s)	188, 628, 724, 882, 889
BspMAI	CTGCAG	2 cut(s)	832, 955
BspMI	ACCTGC	2 cut(s)	683, 719
BspPI	GGATC	2 cut(s)	161, 841
BspQI	GCTCTTC	1 cut(s)	29
BspT107I	GGYRCC	4 cut(s)	626, 722, 880, 887
BspTNI	GGTCTC	1 cut(s)	1140
BsrFI	RCCGGY	1 cut(s)	128
BsrI	ACTGG	5 cut(s)	82, 100, 283, 630, 757
BssAI	RCCGGY	1 cut(s)	128
BssECI	CCNNGG	4 cut(s)	42, 54, 139, 577
BssMI	GATC	2 cut(s)	166, 833
BssNI	GRCGYC	2 cut(s)	93, 723
Bst2UI	CCWGG	5 cut(s)	43, 579, 972, 1083, 1279
Bst4CI	ACNGT	5 cut(s)	89, 743, 785, 1073, 1136
Bst6I	CTCTTC	1 cut(s)	29
BstACI	GRCGYC	2 cut(s)	93, 723
BstAPI	GCANNNNNTGC	1 cut(s)	887
BstC8I	GCNNGC	2 cut(s)	20, 1252
BstDEI	CTNAG	2 cut(s)	681, 1272
BstDSI	CCRYGG	1 cut(s)	139
BstF5I	GGATG	2 cut(s)	266, 664
BstFNI	CGCG	3 cut(s)	117, 141, 1162
BstH2I	RGCGCY	3 cut(s)	224, 560, 726
BstHHI	GCGC	4 cut(s)	117, 223, 559, 725
BstKTI	GATC	2 cut(s)	169, 836
BstMAI	GTCTC	1 cut(s)	1140
BstMBI	GATC	2 cut(s)	166, 833
BstMCI	CGRYCG	2 cut(s)	133, 217
BstMWI	GCNNNNNNNGC	9 cut(s)	138, 141, 147, 239, 626, 860, 887, 962, 989
BstNI	CCWGG	5 cut(s)	43, 579, 972, 1083, 1279
BstSCI	CCNGG	6 cut(s)	41, 577, 883, 970, 1081, 1277
BstSFI	CTRYAG	2 cut(s)	828, 951
BstSLI	GKGCMC	1 cut(s)	883
BstUI	CGCG	3 cut(s)	117, 141, 1162
BstV1I	GCAGC	5 cut(s)	688, 921, 937, 952, 965
BstV2I	GAAGAC	2 cut(s)	151, 378
BstZI	CGGCCG	2 cut(s)	130, 214
BsuI	GTATCC	1 cut(s)	1205
BsuRI	GGCC	4 cut(s)	132, 216, 651, 825
BtgI	CCRYGG	1 cut(s)	139
BtrI	CACGTC	1 cut(s)	1109
BtsCI	GGATG	2 cut(s)	266, 664
BtsI	GCAGTG	1 cut(s)	412
BtsIMutI	CAGTG	5 cut(s)	362, 412, 480, 748, 1141
BveI	ACCTGC	2 cut(s)	683, 719
Cac8I	GCNNGC	2 cut(s)	20, 1252
CfoI	GCGC	4 cut(s)	117, 223, 559, 725
Cfr10I	RCCGGY	1 cut(s)	128
Cfr13I	GGNCC	2 cut(s)	187, 824
Cfr42I	CCGCGG	1 cut(s)	142
Csp6I	GTAC	4 cut(s)	85, 400, 503, 1119
CspCI	CAANNNNNGTGG	2 cut(s)	1120, 1155
CviAII	CATG	4 cut(s)	112, 521, 1174, 1227
CviQI	GTAC	4 cut(s)	85, 400, 503, 1119
DdeI	CTNAG	2 cut(s)	681, 1272
DinI	GGCGCC	1 cut(s)	724
DpnI	GATC	2 cut(s)	168, 835
DpnII	GATC	2 cut(s)	166, 833
DraIII	CACNNNGTG	1 cut(s)	887
EaeI	YGGCCR	3 cut(s)	130, 214, 649
EagI	CGGCCG	2 cut(s)	130, 214
Eam1104I	CTCTTC	1 cut(s)	29
EarI	CTCTTC	1 cut(s)	29
EciI	GGCGGA	1 cut(s)	48
EclXI	CGGCCG	2 cut(s)	130, 214
Eco31I	GGTCTC	1 cut(s)	1140
Eco47I	GGWCC	1 cut(s)	187
Eco47III	AGCGCT	2 cut(s)	222, 558
Eco52I	CGGCCG	2 cut(s)	130, 214
Eco57I	CTGAAG	2 cut(s)	504, 921
Eco88I	CYCGRG	1 cut(s)	453
EcoO109I	RGGNCCY	1 cut(s)	187
EcoRII	CCWGG	5 cut(s)	41, 577, 970, 1081, 1277
EcoT22I	ATGCAT	1 cut(s)	1225
EgeI	GGCGCC	1 cut(s)	724
EheI	GGCGCC	1 cut(s)	724
FaeI	CATG	4 cut(s)	115, 524, 1177, 1230
FalI	AAGNNNNNCTT	2 cut(s)	970, 1002
FaqI	GGGAC	3 cut(s)	59, 903, 1108
FatI	CATG	4 cut(s)	111, 520, 1173, 1226
FauI	CCCGC	1 cut(s)	146
FauNDI	CATATG	1 cut(s)	838
FblI	GTMKAC	1 cut(s)	686
Fnu4HI	GCNGC	8 cut(s)	133, 142, 677, 726, 910, 951, 954, 966
FokI	GGATG	2 cut(s)	253, 671
Fsp4HI	GCNGC	8 cut(s)	133, 142, 677, 726, 910, 951, 954, 966
FspBI	CTAG	4 cut(s)	38, 297, 1011, 1128
GlaI	GCGC	4 cut(s)	116, 222, 558, 724
GluI	GCNGC	8 cut(s)	133, 142, 677, 726, 910, 951, 954, 966
GsuI	CTGGAG	2 cut(s)	327, 954
HaeII	RGCGCY	3 cut(s)	224, 560, 726
HaeIII	GGCC	4 cut(s)	132, 216, 651, 825
HapII	CCGG	2 cut(s)	129, 885
HhaI	GCGC	4 cut(s)	117, 223, 559, 725
Hin1I	GRCGYC	2 cut(s)	93, 723
Hin1II	CATG	4 cut(s)	115, 524, 1177, 1230
Hin6I	GCGC	4 cut(s)	115, 221, 557, 723
HinP1I	GCGC	4 cut(s)	115, 221, 557, 723
HinfI	GANTC	1 cut(s)	5
HpaII	CCGG	2 cut(s)	129, 885
HphI	GGTGA	2 cut(s)	58, 101
Hpy166II	GTNNAC	3 cut(s)	536, 687, 1106
Hpy188I	TCNGA	2 cut(s)	10, 166
Hpy188III	TCNNGA	2 cut(s)	249, 306
Hpy8I	GTNNAC	3 cut(s)	536, 687, 1106
Hpy99I	CGWCG	3 cut(s)	14, 158, 215
HpyAV	CCTTC	4 cut(s)	232, 366, 996, 1251
HpyCH4III	ACNGT	5 cut(s)	89, 743, 785, 1073, 1136
HpyCH4IV	ACGT	2 cut(s)	93, 1108
HpyCH4V	TGCA	7 cut(s)	491, 572, 676, 830, 953, 1208, 1223
HpyF10VI	GCNNNNNNNGC	9 cut(s)	138, 141, 147, 239, 626, 860, 887, 962, 989
HpyF3I	CTNAG	2 cut(s)	681, 1272
HpySE526I	ACGT	2 cut(s)	93, 1108
Hsp92I	GRCGYC	2 cut(s)	93, 723
Hsp92II	CATG	4 cut(s)	115, 524, 1177, 1230
HspAI	GCGC	4 cut(s)	115, 221, 557, 723
KasI	GGCGCC	1 cut(s)	722
KspI	CCGCGG	1 cut(s)	142
Kzo9I	GATC	2 cut(s)	166, 833
LguI	GCTCTTC	1 cut(s)	29
LmnI	GCTCC	5 cut(s)	859, 906, 973, 988, 997
Lsp1109I	GCAGC	5 cut(s)	688, 921, 937, 952, 965
LweI	GCATC	3 cut(s)	478, 559, 1232
MaeI	CTAG	4 cut(s)	38, 297, 1011, 1128
MaeII	ACGT	2 cut(s)	93, 1108
MaeIII	GTNAC	6 cut(s)	89, 409, 737, 779, 1040, 1067
MalI	GATC	2 cut(s)	168, 835
MboI	GATC	2 cut(s)	166, 833
MboII	GAAGA	5 cut(s)	16, 151, 266, 383, 497
MhlI	GDGCHC	2 cut(s)	883, 985
MluCI	AATT	5 cut(s)	283, 319, 386, 808, 1054
Mly113I	GGCGCC	1 cut(s)	723
MmeI	TCCRAC	2 cut(s)	33, 325
Mph1103I	ATGCAT	1 cut(s)	1225
MseI	TTAA	3 cut(s)	288, 324, 1288
MspA1I	CMGCKG	2 cut(s)	141, 1254
MspI	CCGG	2 cut(s)	129, 885
MspR9I	CCNGG	6 cut(s)	43, 579, 885, 972, 1083, 1279
MvaI	CCWGG	5 cut(s)	43, 579, 972, 1083, 1279
MvnI	CGCG	3 cut(s)	117, 141, 1162
MwoI	GCNNNNNNNGC	9 cut(s)	138, 141, 147, 239, 626, 860, 887, 962, 989
NarI	GGCGCC	1 cut(s)	723
NciI	CCSGG	1 cut(s)	885
NdeI	CATATG	1 cut(s)	838
NdeII	GATC	2 cut(s)	166, 833
NlaIII	CATG	4 cut(s)	115, 524, 1177, 1230
NlaIV	GGNNCC	5 cut(s)	188, 628, 724, 882, 889
NmeAIII	GCCGAG	1 cut(s)	242
NmuCI	GTSAC	1 cut(s)	89
NsiI	ATGCAT	1 cut(s)	1225
PaeR7I	CTCGAG	1 cut(s)	453
PaqCI	CACCTGC	1 cut(s)	683
PciSI	GCTCTTC	1 cut(s)	29
PcsI	WCGNNNNNNNCGW	1 cut(s)	153
PflFI	GACNNNGTC	1 cut(s)	185
PflMI	CCANNNNNTGG	1 cut(s)	713
PkrI	GCNGC	8 cut(s)	134, 143, 678, 727, 911, 952, 955, 967
PluTI	GGCGCC	1 cut(s)	726
PpuMI	RGGWCCY	1 cut(s)	187
Psp5II	RGGWCCY	1 cut(s)	187
Psp6I	CCWGG	5 cut(s)	41, 577, 970, 1081, 1277
PspGI	CCWGG	5 cut(s)	41, 577, 970, 1081, 1277
PspN4I	GGNNCC	5 cut(s)	188, 628, 724, 882, 889
PspPI	GGNCC	2 cut(s)	187, 824
PspPPI	RGGWCCY	1 cut(s)	187
PspXI	VCTCGAGB	1 cut(s)	453
PstI	CTGCAG	2 cut(s)	832, 955
PsyI	GACNNNGTC	1 cut(s)	185
RsaI	GTAC	4 cut(s)	86, 401, 504, 1120
RsaNI	GTAC	4 cut(s)	85, 400, 503, 1119
SacII	CCGCGG	1 cut(s)	142
SapI	GCTCTTC	1 cut(s)	29
SaqAI	TTAA	3 cut(s)	288, 324, 1288
SatI	GCNGC	8 cut(s)	133, 142, 677, 726, 910, 951, 954, 966
Sau3AI	GATC	2 cut(s)	166, 833
Sau96I	GGNCC	2 cut(s)	187, 824
SbfI	CCTGCAGG	1 cut(s)	832
ScaI	AGTACT	1 cut(s)	504
ScrFI	CCNGG	6 cut(s)	43, 579, 885, 972, 1083, 1279
SdaI	CCTGCAGG	1 cut(s)	832
SduI	GDGCHC	2 cut(s)	883, 985
SfaNI	GCATC	3 cut(s)	478, 559, 1232
SfcI	CTRYAG	2 cut(s)	828, 951
SfoI	GGCGCC	1 cut(s)	724
Sfr274I	CTCGAG	1 cut(s)	453
Sfr303I	CCGCGG	1 cut(s)	142
SgrBI	CCGCGG	1 cut(s)	142
SinI	GGWCC	1 cut(s)	187
SlaI	CTCGAG	1 cut(s)	453
SmlI	CTYRAG	1 cut(s)	453
SmoI	CTYRAG	1 cut(s)	453
Sse8387I	CCTGCAGG	1 cut(s)	832
Sse9I	AATT	5 cut(s)	283, 319, 386, 808, 1054
SsiI	CCGC	7 cut(s)	33, 133, 139, 141, 582, 726, 1254
SspDI	GGCGCC	1 cut(s)	722
SspI	AATATT	1 cut(s)	339
SspMI	CTAG	4 cut(s)	38, 297, 1011, 1128
StyD4I	CCNGG	6 cut(s)	41, 577, 883, 970, 1081, 1277
TaaI	ACNGT	5 cut(s)	89, 743, 785, 1073, 1136
TaiI	ACGT	2 cut(s)	96, 1111
TaqI	TCGA	3 cut(s)	180, 210, 454
TasI	AATT	5 cut(s)	283, 319, 386, 808, 1054
TatI	WGTACW	1 cut(s)	502
TauI	GCSGC	3 cut(s)	135, 144, 728
Tru1I	TTAA	3 cut(s)	288, 324, 1288
Tru9I	TTAA	3 cut(s)	288, 324, 1288
TscAI	CASTG	5 cut(s)	369, 412, 487, 748, 1141
TseFI	GTSAC	1 cut(s)	89
TseI	GCWGC	5 cut(s)	676, 909, 950, 953, 965
Tsp45I	GTSAC	1 cut(s)	89
TspDTI	ATGAA	2 cut(s)	16, 457
TspGWI	ACGGA	2 cut(s)	94, 390
TspRI	CASTG	5 cut(s)	369, 412, 487, 748, 1141
Tth111I	GACNNNGTC	1 cut(s)	185
Van91I	CCANNNNNTGG	1 cut(s)	713
VpaK11BI	GGWCC	1 cut(s)	187
XapI	RAATTY	2 cut(s)	283, 319
XcmI	CCANNNNNNNNNTGG	2 cut(s)	527, 920
XhoI	CTCGAG	1 cut(s)	453
XmiI	GTMKAC	1 cut(s)	686
XspI	CTAG	4 cut(s)	38, 297, 1011, 1128
ZraI	GACGTC	1 cut(s)	94
ZrmI	AGTACT	1 cut(s)	504
Zsp2I	ATGCAT	1 cut(s)	1225

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.