Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0006136

Physical Location & Seq

Genomic Coordinates Reverse (-)

19072566 .. 19075869

Gene Structure 3304 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g15390.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1950 bp

ATGACTGTTTTGTTTATAGCTTTAGTTTTGATCCTACAATGCTGCTTCATAGCTAGTGTTTACCACCCTCTAGATCCTCTCAGCTCAACTGAGATCAACAAAGTAAGGCTCCTAGTTCAGAAGTCTCACCTTGCAAAACTTCCTAATCTCACCTTTCATTATGTCGATATCGAAGAGCCGGAAAAGGCAGATGTCCTCAAATGGCTATCTTCAAGCTCAAGTAATCCAAAAAGTCGCATTTCCACCCCTCCCCACCGGGCACACGTGGTGGTCCGAGGCGGTGGTGATACACACGAGCTCGTGGTGGACTTAGGCACCAACATTATCATATCGGACCACGTCTACACTGGTAATGGTTACCCTCCTTTCACCTTCAATGAGTTGTTCAAAGCTAGCAAGCTTCCTTTGACTTACCCCAAATTCAAGAAATCAATTTCCACTAGGGGATTGAATTTGTCTGAAGTTTCTTGCATACCCTTCACAATTGGTTGGTATGGGGAACATATCACAAGGAGGGCTTTAAAAGTGGAATGCTGCTATAGAGGAGGGTCGGTCAATGTCTTCACTAGGCCAATTGAGGGAATCACCATTCTTGTGGATGTTGATTTGATGAAGATCACAATGTACACTGATAGGTTCATAGCACCTTTGCCTAAAGCTGAAGGCACTGATTTCCAAATCCCAAAAGGGAAGTCACATTCTGATCATTGCAACAAAACAAGTAGTGGGTTTTCCATTGAAGGCCACAAGGTGAAGTGGGAAAACTGGGTTTTTCATGTTGGGTTTAATGCTAGAGCAGGAATGGTGATCTCAACAGCTTCAGTATTTGATGCCATAAAGAAGAAGTTCAGGAGTGTGTTATATAGAGGGCATGTTTCTGAGACCTTTGTGCCTTATATGGATCCTACAAATGAATGGTATTTCAGGACTTTTATGGATATAGGTGAATTTGGGTTTGGGAGATCAGCTGATACTCTTCAGCCATTAATTGATTGTCCTGGAAATGCTGAATACTTGGATGGGTTTATGGCTGGGGCAGCTGGGGAGGTACAGAAGGTACCAAGGGCTATTTGCATCTTTGAAAGGTACTCAGGTGATGTTGCAATGAGACATACTGAAATAAATGTCCCTGGAAAATTGATAAGAAGTGGGCAGCAGGAGAAGACTCTGGTGGTTAGAATGGTGGCTACTGTGGGTAACTATGATTATGTTCTTGATTGGGAATTCAAGCGAAGTGGCACCATCAAAGTTGGGGTGGGCTTGACTGGTGTCTTAGAGGTAAAGGCCACATCATACACAAACGCTGACCAGATAACGGAAAACGTGCACGGGACGTTAGTCTCAGAAAACACCGTCGCCGTTAACCACGACCACTTCCTCACCTACTATCTAGACCTCGACGTCGACGGTAACGACAACTCCATTGTCAAAGCCAAGATGAAAACATCAAGAGCTAACGGTGTCGGGTCACCAAGAAAGAGTTATTGGACGGTAGTAAAAGAAACGGCCAAAACTGAAGCCGACGCTAGGCTCCGGCTCGGCTTAGAGCCAGTTGATTTGTTAATTGTGAACCCTAATAGGAAGACTCGGCTCGGGAATCAGGTCGGTTACCGGCTTGTTACCGGACAACCGGTTACATCTCTTCTTGCCGATGATGATTACCCCCAAATTAGGGCTTCTTATACCAAGTATCAGGTTTGGGTGACTGCTTATAATAAGTCAGAGAGGTGGGCTGGAGGGTTCTATGCTGATAGGAGCCATGGAGATGATGGCTTAGCTGTTTGGAGCAAGAGGGATAGAGCAATTGAAAACAAAGATATAGTGTTGTGGTACACGGTGGGATTTCATCACATCCCATACCAAGAAGATTTCCCAGCCATGCCCACACTCCATGGTGGATTCGAGCTCAGCCCTGCAAACTTTTTCGAGTCCAACCCTTTACTCAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005618 GO:0005623 GO:0007154 GO:0007165 GO:0008131 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009888 GO:0009987 GO:0010033 GO:0010035 GO:0010087 GO:0010089 GO:0010941 GO:0016491 GO:0016638 GO:0016641 GO:0023052 GO:0030312 GO:0032502 GO:0032870 GO:0042221 GO:0043067 GO:0044464 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0052597 GO:0055114 GO:0065007 GO:0070887 GO:0071229 GO:0071241 GO:0071310 GO:0071395 GO:0071495 GO:0071944 GO:0090059 GO:0097184 GO:0097185 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00260 ko00350 ko00360 ko00410 ko00950 ko00960 ko01100 ko01110 map00260 map00350 map00360 map00410 map00950 map00960 map01100 map01110

Pfam Domains

Protein Families

Cu_amine_oxid Cu_amine_oxidN2 Cu_amine_oxidN3

Protein Analysis

650

Amino Acids

72.75

Weight (kDa)

8.21

Isoelectric Point (pI)

31.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu_amine_oxidN2	PF02727	22 - 112	1.7e-21	Copper amine oxidase, N2 domain
Cu_amine_oxidN3	PF02728	121 - 214	1.1e-23	Copper amine oxidase, N3 domain
Cu_amine_oxid	PF01179	240 - 647	1.9e-135	Copper amine oxidase, enzyme domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006136)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14940
fragaria_vesca	FvH4_4g15350 FvH4_4g15390
malus_domestica	MD13G1191800.v1.1
prunus_persica	Prupe.1G012100_v2.0.a1 Prupe.1G012100_v2.0.a1
pyrus_communis	pycom13g16440
rosa_chinensis	RchiOBHm_Chr4g0416411 RchiOBHm_Chr5g0045871
rosa_laevigata	RLG00000007984 RLG00000034395
rosa_multiflora	Rmu_sc0001488.1_g000020
rosa_roxburghii	Rroxscaffold_1G00035130 Rroxscaffold_1G00035220 Rroxscaffold_5G00360240
rosa_rugosa	Rorug04G0141600 Rorug04G0141700 Rorug05G0226600
rosa_samantha	Rh4AG204000 Rh4BG201400 Rh4CG215200 Rh4DG201300 Rh5BG316100 Rh5DG326400
rosa_wichuraiana	Rw0G018920 Rw4G017270 Rw5G028820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1713
AasI	GACNNNNNNGTC	1 cut(s)	1400
AatII	GACGTC	1 cut(s)	1404
Acc65I	GGTACC	1 cut(s)	1057
AccB1I	GGYRCC	3 cut(s)	314, 1057, 1238
AccI	GTMKAC	2 cut(s)	342, 1404
AciI	CCGC	1 cut(s)	279
AclWI	GGATC	4 cut(s)	25, 68, 896, 909
AcoI	YGGCCR	1 cut(s)	1506
AcsI	RAATTY	4 cut(s)	419, 451, 947, 1223
AcuI	CTGAAG	5 cut(s)	480, 681, 804, 962, 1536
AcvI	CACGTG	1 cut(s)	265
AcyI	GRCGYC	1 cut(s)	1401
AdeI	CACNNNGTG	2 cut(s)	268, 751
AfaI	GTAC	5 cut(s)	626, 1050, 1059, 1088, 1832
AfiI	CCNNNNNNNGG	5 cut(s)	578, 1315, 1527, 1671, 1672
AflIII	ACRYGT	1 cut(s)	262
AgeI	ACCGGT	1 cut(s)	1630
AgsI	TTSAA	9 cut(s)	213, 376, 388, 424, 451, 740, 1082, 1228, 1808
AjiI	CACGTC	1 cut(s)	340
AjnI	CCWGG	2 cut(s)	997, 1129
AjuI	GAANNNNNNNTTGG	4 cut(s)	939, 971, 1468, 1500
Alw21I	GWGCWC	3 cut(s)	300, 1329, 1908
Alw26I	GTCTC	4 cut(s)	129, 875, 1102, 1345
Alw44I	GTGCAC	1 cut(s)	1325
AlwI	GGATC	4 cut(s)	25, 68, 896, 909
Ama87I	CYCGRG	1 cut(s)	1592
AoxI	GGCC	4 cut(s)	569, 742, 1284, 1506
ApaLI	GTGCAC	1 cut(s)	1325
ApeKI	GCWGC	4 cut(s)	42, 534, 1037, 1153
ApoI	RAATTY	4 cut(s)	419, 451, 947, 1223
ArsI	GACNNNNNNTTYG	2 cut(s)	677, 709
AseI	ATTAAT	1 cut(s)	986
AsiGI	ACCGGT	1 cut(s)	1630
Asp700I	GAANNNNTTC	1 cut(s)	845
Asp718I	GGTACC	1 cut(s)	1057
AspS9I	GGNCC	2 cut(s)	271, 334
AsuC2I	CCSGG	1 cut(s)	257
AsuNHI	GCTAGC	1 cut(s)	392
AvaI	CYCGRG	1 cut(s)	1592
AvaII	GGWCC	2 cut(s)	271, 334
BaeGI	GKGCMC	2 cut(s)	262, 1329
BaeI	ACNNNNGTAYC	2 cut(s)	1078, 1111
BamHI	GGATCC	1 cut(s)	901
BanI	GGYRCC	3 cut(s)	314, 1057, 1238
BanII	GRGCYC	2 cut(s)	300, 1908
BauI	CACGAG	2 cut(s)	293, 299
BbrPI	CACGTG	1 cut(s)	265
BbsI	GAAGAC	3 cut(s)	553, 1169, 1589
Bbv12I	GWGCWC	3 cut(s)	300, 1329, 1908
BbvI	GCAGC	4 cut(s)	29, 521, 1049, 1165
BccI	CCATC	3 cut(s)	1013, 1250, 1763
BceAI	ACGGC	2 cut(s)	1343, 1521
BciT130I	CCWGG	2 cut(s)	999, 1131
BclI	TGATCA	1 cut(s)	703
BcnI	CCSGG	1 cut(s)	257
BcoDI	GTCTC	4 cut(s)	129, 875, 1102, 1345
BfaI	CTAG	9 cut(s)	54, 71, 113, 393, 441, 567, 792, 1391, 1527
BfmI	CTRYAG	1 cut(s)	538
BisI	GCNGC	4 cut(s)	43, 535, 1038, 1154
BlpI	GCTNAGC	2 cut(s)	1774, 1907
BlsI	GCNGC	4 cut(s)	44, 536, 1039, 1155
Bme1390I	CCNGG	3 cut(s)	257, 999, 1131
Bme18I	GGWCC	2 cut(s)	271, 334
BmeT110I	CYCGRG	1 cut(s)	1592
BmgBI	CACGTC	1 cut(s)	340
BmgT120I	GGNCC	2 cut(s)	271, 334
BmiI	GGNNCC	7 cut(s)	110, 316, 903, 1059, 1240, 1532, 1757
BmrFI	CCNGG	3 cut(s)	257, 999, 1131
BmrI	ACTGGG	1 cut(s)	775
BmsI	GCATC	2 cut(s)	820, 1083
BmtI	GCTAGC	1 cut(s)	396
BmuI	ACTGGG	1 cut(s)	775
BoxI	GACNNNNGTC	2 cut(s)	1268, 1337
BpiI	GAAGAC	3 cut(s)	553, 1169, 1589
BpmI	CTGGAG	1 cut(s)	1755
Bpu1102I	GCTNAGC	2 cut(s)	1774, 1907
BpuEI	CTTGAG	1 cut(s)	202
BpuMI	CCSGG	1 cut(s)	257
BsaAI	YACGTR	1 cut(s)	265
BsaBI	GATNNNNATC	1 cut(s)	614
BsaHI	GRCGYC	1 cut(s)	1401
BsaI	GGTCTC	1 cut(s)	875
BsaJI	CCNNGG	5 cut(s)	274, 1061, 1129, 1759, 1891
BsaWI	WCCGGW	2 cut(s)	1622, 1630
BsaXI	ACNNNNNCTCC	4 cut(s)	537, 567, 1403, 1433
Bsc4I	CCNNNNNNNGG	5 cut(s)	578, 1315, 1527, 1671, 1672
Bse118I	RCCGGY	2 cut(s)	1611, 1630
Bse1I	ACTGG	4 cut(s)	352, 770, 1270, 1550
Bse3DI	GCAATG	2 cut(s)	706, 1110
Bse8I	GATNNNNATC	1 cut(s)	614
BseBI	CCWGG	2 cut(s)	999, 1131
BseDI	CCNNGG	5 cut(s)	274, 1061, 1129, 1759, 1891
BseGI	GGATG	3 cut(s)	604, 1024, 1851
BseJI	GATNNNNATC	1 cut(s)	614
BseLI	CCNNNNNNNGG	5 cut(s)	578, 1315, 1527, 1671, 1672
BseMI	GCAATG	2 cut(s)	706, 1110
BseMII	CTCAG	6 cut(s)	81, 94, 870, 1104, 1356, 1921
BseNI	ACTGG	4 cut(s)	352, 770, 1270, 1550
BseRI	GAGGAG	1 cut(s)	558
BseSI	GKGCMC	2 cut(s)	262, 1329
BseXI	GCAGC	4 cut(s)	29, 521, 1049, 1165
BseYI	CCCAGC	3 cut(s)	1031, 1040, 1873
BshFI	GGCC	4 cut(s)	571, 744, 1286, 1508
BshNI	GGYRCC	3 cut(s)	314, 1057, 1238
BshTI	ACCGGT	1 cut(s)	1630
BsiHKAI	GWGCWC	3 cut(s)	300, 1329, 1908
BsiHKCI	CYCGRG	1 cut(s)	1592
BsiSI	CCGG	6 cut(s)	179, 256, 1534, 1612, 1623, 1631
BslFI	GGGAC	2 cut(s)	1112, 1345
BslI	CCNNNNNNNGG	5 cut(s)	578, 1315, 1527, 1671, 1672
BsmAI	GTCTC	4 cut(s)	129, 875, 1102, 1345
BsmFI	GGGAC	2 cut(s)	1112, 1345
BsmI	GAATGC	1 cut(s)	536
BsnI	GGCC	4 cut(s)	571, 744, 1286, 1508
Bso31I	GGTCTC	1 cut(s)	875
BsoBI	CYCGRG	1 cut(s)	1592
Bsp1286I	GDGCHC	4 cut(s)	262, 300, 1329, 1908
Bsp1407I	TGTACA	1 cut(s)	624
Bsp143I	GATC	8 cut(s)	30, 73, 93, 615, 703, 807, 901, 962
Bsp1720I	GCTNAGC	2 cut(s)	1774, 1907
Bsp19I	CCATGG	2 cut(s)	1759, 1891
BspACI	CCGC	1 cut(s)	279
BspANI	GGCC	4 cut(s)	571, 744, 1286, 1508
BspCNI	CTCAG	6 cut(s)	82, 93, 871, 1103, 1355, 1920
BspLI	GGNNCC	7 cut(s)	110, 316, 903, 1059, 1240, 1532, 1757
BspOI	GCTAGC	1 cut(s)	396
BspPI	GGATC	4 cut(s)	25, 68, 896, 909
BspQI	GCTCTTC	1 cut(s)	168
BspT107I	GGYRCC	3 cut(s)	314, 1057, 1238
BspTNI	GGTCTC	1 cut(s)	875
BsrDI	GCAATG	2 cut(s)	706, 1110
BsrFI	RCCGGY	2 cut(s)	1611, 1630
BsrGI	TGTACA	1 cut(s)	624
BsrI	ACTGG	4 cut(s)	352, 770, 1270, 1550
BssAI	RCCGGY	2 cut(s)	1611, 1630
BssECI	CCNNGG	5 cut(s)	274, 1061, 1129, 1759, 1891
BssMI	GATC	8 cut(s)	30, 73, 93, 615, 703, 807, 901, 962
BssNI	GRCGYC	1 cut(s)	1401
BssSI	CACGAG	2 cut(s)	293, 299
BssT1I	CCWWGG	3 cut(s)	1061, 1759, 1891
Bst2BI	CACGAG	2 cut(s)	293, 299
Bst2UI	CCWGG	2 cut(s)	999, 1131
Bst4CI	ACNGT	7 cut(s)	7, 1192, 1354, 1409, 1460, 1492, 1837
Bst6I	CTCTTC	3 cut(s)	168, 981, 1647
BstACI	GRCGYC	1 cut(s)	1401
BstAUI	TGTACA	1 cut(s)	624
BstBAI	YACGTR	1 cut(s)	265
BstC8I	GCNNGC	2 cut(s)	394, 398
BstDSI	CCRYGG	2 cut(s)	1759, 1891
BstEII	GGTNACC	3 cut(s)	356, 1467, 1607
BstF5I	GGATG	3 cut(s)	604, 1024, 1851
BstKTI	GATC	8 cut(s)	33, 76, 96, 618, 706, 810, 904, 965
BstMAI	GTCTC	4 cut(s)	129, 875, 1102, 1345
BstMBI	GATC	8 cut(s)	30, 73, 93, 615, 703, 807, 901, 962
BstMWI	GCNNNNNNNGC	1 cut(s)	1037
BstNI	CCWGG	2 cut(s)	999, 1131
BstNSI	RCATGY	1 cut(s)	875
BstPAI	GACNNNNGTC	2 cut(s)	1268, 1337
BstPI	GGTNACC	3 cut(s)	356, 1467, 1607
BstSCI	CCNGG	3 cut(s)	255, 997, 1129
BstSFI	CTRYAG	1 cut(s)	538
BstSLI	GKGCMC	2 cut(s)	262, 1329
BstV1I	GCAGC	4 cut(s)	29, 521, 1049, 1165
BstV2I	GAAGAC	3 cut(s)	553, 1169, 1589
BstX2I	RGATCY	2 cut(s)	73, 901
BstXI	CCANNNNNNTGG	1 cut(s)	595
BstYI	RGATCY	2 cut(s)	73, 901
BsuRI	GGCC	4 cut(s)	571, 744, 1286, 1508
BtgI	CCRYGG	2 cut(s)	1759, 1891
BtrI	CACGTC	1 cut(s)	340
BtsCI	GGATG	3 cut(s)	604, 1024, 1851
BtsIMutI	CAGTG	3 cut(s)	345, 627, 666
Cac8I	GCNNGC	2 cut(s)	394, 398
Cfr10I	RCCGGY	2 cut(s)	1611, 1630
Cfr13I	GGNCC	2 cut(s)	271, 334
CseI	GACGC	1 cut(s)	1532
Csp6I	GTAC	5 cut(s)	625, 1049, 1058, 1087, 1831
CspAI	ACCGGT	1 cut(s)	1630
CspCI	CAANNNNNGTGG	2 cut(s)	1216, 1251
CviAII	CATG	5 cut(s)	776, 872, 1760, 1879, 1892
CviQI	GTAC	5 cut(s)	625, 1049, 1058, 1087, 1831
DpnI	GATC	8 cut(s)	32, 75, 95, 617, 705, 809, 903, 964
DpnII	GATC	8 cut(s)	30, 73, 93, 615, 703, 807, 901, 962
DraI	TTTAAA	1 cut(s)	522
DraIII	CACNNNGTG	2 cut(s)	268, 751
DrdI	GACNNNNNNGTC	1 cut(s)	1400
DseDI	GACNNNNNNGTC	1 cut(s)	1400
EaeI	YGGCCR	1 cut(s)	1506
Eam1104I	CTCTTC	3 cut(s)	168, 981, 1647
EarI	CTCTTC	3 cut(s)	168, 981, 1647
Ecl136II	GAGCTC	2 cut(s)	298, 1906
Eco130I	CCWWGG	3 cut(s)	1061, 1759, 1891
Eco24I	GRGCYC	2 cut(s)	300, 1908
Eco31I	GGTCTC	1 cut(s)	875
Eco32I	GATATC	1 cut(s)	169
Eco47I	GGWCC	2 cut(s)	271, 334
Eco53kI	GAGCTC	2 cut(s)	298, 1906
Eco57I	CTGAAG	5 cut(s)	480, 681, 804, 962, 1536
Eco72I	CACGTG	1 cut(s)	265
Eco88I	CYCGRG	1 cut(s)	1592
Eco91I	GGTNACC	3 cut(s)	356, 1467, 1607
EcoICRI	GAGCTC	2 cut(s)	298, 1906
EcoO65I	GGTNACC	3 cut(s)	356, 1467, 1607
EcoRI	GAATTC	1 cut(s)	1223
EcoRII	CCWGG	2 cut(s)	997, 1129
EcoRV	GATATC	1 cut(s)	169
EcoT14I	CCWWGG	3 cut(s)	1061, 1759, 1891
EcoT38I	GRGCYC	2 cut(s)	300, 1908
ErhI	CCWWGG	3 cut(s)	1061, 1759, 1891
FaeI	CATG	5 cut(s)	779, 875, 1763, 1882, 1895
FalI	AAGNNNNNCTT	2 cut(s)	502, 534
FaqI	GGGAC	2 cut(s)	1112, 1345
FatI	CATG	5 cut(s)	775, 871, 1759, 1878, 1891
FbaI	TGATCA	1 cut(s)	703
FblI	GTMKAC	2 cut(s)	342, 1404
Fnu4HI	GCNGC	4 cut(s)	43, 535, 1038, 1154
FokI	GGATG	3 cut(s)	611, 1031, 1838
FriOI	GRGCYC	2 cut(s)	300, 1908
Fsp4HI	GCNGC	4 cut(s)	43, 535, 1038, 1154
FspBI	CTAG	9 cut(s)	54, 71, 113, 393, 441, 567, 792, 1391, 1527
GluI	GCNGC	4 cut(s)	43, 535, 1038, 1154
GsaI	CCCAGC	3 cut(s)	1035, 1044, 1877
GsuI	CTGGAG	1 cut(s)	1755
HaeIII	GGCC	4 cut(s)	571, 744, 1286, 1508
HapII	CCGG	6 cut(s)	179, 256, 1534, 1612, 1623, 1631
HgaI	GACGC	1 cut(s)	1532
Hin1I	GRCGYC	1 cut(s)	1401
Hin1II	CATG	5 cut(s)	779, 875, 1763, 1882, 1895
HincII	GTYRAC	2 cut(s)	1363, 1405
HindII	GTYRAC	2 cut(s)	1363, 1405
HindIII	AAGCTT	1 cut(s)	398
HinfI	GANTC	6 cut(s)	582, 1165, 1585, 1597, 1899, 1928
HpaI	GTTAAC	1 cut(s)	1363
HpaII	CCGG	6 cut(s)	179, 256, 1534, 1612, 1623, 1631
Hpy166II	GTNNAC	9 cut(s)	61, 307, 343, 627, 1327, 1363, 1405, 1570, 1833
Hpy188I	TCNGA	8 cut(s)	120, 275, 334, 460, 703, 880, 1345, 1723
Hpy188III	TCNNGA	8 cut(s)	71, 424, 850, 925, 1214, 1391, 1449, 1594
Hpy8I	GTNNAC	9 cut(s)	61, 307, 343, 627, 1327, 1363, 1405, 1570, 1833
Hpy99I	CGWCG	5 cut(s)	1358, 1403, 1406, 1409, 1526
HpyAV	CCTTC	5 cut(s)	382, 487, 656, 734, 1048
HpyCH4III	ACNGT	7 cut(s)	7, 1192, 1354, 1409, 1460, 1492, 1837
HpyCH4IV	ACGT	5 cut(s)	264, 339, 1323, 1334, 1401
HpyCH4V	TGCA	7 cut(s)	134, 471, 711, 1074, 1103, 1327, 1916
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1037
HpySE526I	ACGT	5 cut(s)	264, 339, 1323, 1334, 1401
Hsp92I	GRCGYC	1 cut(s)	1401
Hsp92II	CATG	5 cut(s)	779, 875, 1763, 1882, 1895
KpnI	GGTACC	1 cut(s)	1061
Ksp22I	TGATCA	1 cut(s)	703
KspAI	GTTAAC	1 cut(s)	1363
Kzo9I	GATC	8 cut(s)	30, 73, 93, 615, 703, 807, 901, 962
LguI	GCTCTTC	1 cut(s)	168
LmnI	GCTCC	4 cut(s)	114, 1536, 1755, 1785
Lsp1109I	GCAGC	4 cut(s)	29, 521, 1049, 1165
LweI	GCATC	2 cut(s)	820, 1083
MaeI	CTAG	9 cut(s)	54, 71, 113, 393, 441, 567, 792, 1391, 1527
MaeII	ACGT	5 cut(s)	264, 339, 1323, 1334, 1401
MaeIII	GTNAC	9 cut(s)	356, 693, 1196, 1409, 1467, 1607, 1618, 1633, 1702
MalI	GATC	8 cut(s)	32, 75, 95, 617, 705, 809, 903, 964
MboI	GATC	8 cut(s)	30, 73, 93, 615, 703, 807, 901, 962
MfeI	CAATTG	3 cut(s)	483, 573, 1803
MflI	RGATCY	2 cut(s)	73, 901
MhlI	GDGCHC	4 cut(s)	262, 300, 1329, 1908
MlyI	GAGTC	3 cut(s)	1159, 1579, 1937
MroXI	GAANNNNTTC	1 cut(s)	845
MseI	TTAA	5 cut(s)	521, 786, 986, 1362, 1562
MslI	CAYNNNNRTG	2 cut(s)	593, 1764
MspA1I	CMGCKG	2 cut(s)	968, 1040
MspI	CCGG	6 cut(s)	179, 256, 1534, 1612, 1623, 1631
MspR9I	CCNGG	3 cut(s)	257, 999, 1131
MunI	CAATTG	3 cut(s)	483, 573, 1803
Mva1269I	GAATGC	1 cut(s)	536
MvaI	CCWGG	2 cut(s)	999, 1131
MwoI	GCNNNNNNNGC	1 cut(s)	1037
NciI	CCSGG	1 cut(s)	257
NcoI	CCATGG	2 cut(s)	1759, 1891
NdeII	GATC	8 cut(s)	30, 73, 93, 615, 703, 807, 901, 962
NheI	GCTAGC	1 cut(s)	392
NlaIII	CATG	5 cut(s)	779, 875, 1763, 1882, 1895
NlaIV	GGNNCC	7 cut(s)	110, 316, 903, 1059, 1240, 1532, 1757
NmeAIII	GCCGAG	2 cut(s)	1518, 1567
NmuCI	GTSAC	3 cut(s)	693, 1467, 1702
NspI	RCATGY	1 cut(s)	875
PciSI	GCTCTTC	1 cut(s)	168
PcsI	WCGNNNNNNNCGW	1 cut(s)	1410
PctI	GAATGC	1 cut(s)	536
PdmI	GAANNNNTTC	1 cut(s)	845
PfeI	GAWTC	3 cut(s)	582, 1597, 1899
PflFI	GACNNNGTC	1 cut(s)	338
PfoI	TCCNGGA	1 cut(s)	997
PinAI	ACCGGT	1 cut(s)	1630
PkrI	GCNGC	4 cut(s)	44, 536, 1039, 1155
PleI	GAGTC	3 cut(s)	1159, 1579, 1936
PmaCI	CACGTG	1 cut(s)	265
PmlI	CACGTG	1 cut(s)	265
PpsI	GAGTC	3 cut(s)	1159, 1579, 1936
Ppu21I	YACGTR	1 cut(s)	265
PshAI	GACNNNNGTC	2 cut(s)	1268, 1337
PshBI	ATTAAT	1 cut(s)	986
PsiI	TTATAA	1 cut(s)	1713
Psp124BI	GAGCTC	2 cut(s)	300, 1908
Psp6I	CCWGG	2 cut(s)	997, 1129
PspCI	CACGTG	1 cut(s)	265
PspEI	GGTNACC	3 cut(s)	356, 1467, 1607
PspFI	CCCAGC	3 cut(s)	1031, 1040, 1873
PspGI	CCWGG	2 cut(s)	997, 1129
PspN4I	GGNNCC	7 cut(s)	110, 316, 903, 1059, 1240, 1532, 1757
PspPI	GGNCC	2 cut(s)	271, 334
PsuI	RGATCY	2 cut(s)	73, 901
PsyI	GACNNNGTC	1 cut(s)	338
PvuII	CAGCTG	2 cut(s)	968, 1040
RsaI	GTAC	5 cut(s)	626, 1050, 1059, 1088, 1832
RsaNI	GTAC	5 cut(s)	625, 1049, 1058, 1087, 1831
RseI	CAYNNNNRTG	2 cut(s)	593, 1764
SacI	GAGCTC	2 cut(s)	300, 1908
SalI	GTCGAC	1 cut(s)	1403
SapI	GCTCTTC	1 cut(s)	168
SaqAI	TTAA	5 cut(s)	521, 786, 986, 1362, 1562
SatI	GCNGC	4 cut(s)	43, 535, 1038, 1154
Sau3AI	GATC	8 cut(s)	30, 73, 93, 615, 703, 807, 901, 962
Sau96I	GGNCC	2 cut(s)	271, 334
SchI	GAGTC	3 cut(s)	1159, 1579, 1937
ScrFI	CCNGG	3 cut(s)	257, 999, 1131
SduI	GDGCHC	4 cut(s)	262, 300, 1329, 1908
SfaNI	GCATC	2 cut(s)	820, 1083
SfcI	CTRYAG	1 cut(s)	538
SgrDI	CGTCGACG	1 cut(s)	1403
SinI	GGWCC	2 cut(s)	271, 334
SmiMI	CAYNNNNRTG	2 cut(s)	593, 1764
SmlI	CTYRAG	1 cut(s)	217
SmoI	CTYRAG	1 cut(s)	217
SsiI	CCGC	1 cut(s)	279
SspMI	CTAG	9 cut(s)	54, 71, 113, 393, 441, 567, 792, 1391, 1527
SstI	GAGCTC	2 cut(s)	300, 1908
StyD4I	CCNGG	3 cut(s)	255, 997, 1129
StyI	CCWWGG	3 cut(s)	1061, 1759, 1891
TaaI	ACNGT	7 cut(s)	7, 1192, 1354, 1409, 1460, 1492, 1837
TaiI	ACGT	5 cut(s)	267, 342, 1326, 1337, 1404
TaqI	TCGA	6 cut(s)	165, 171, 1398, 1404, 1902, 1926
TaqII	GACCGA	1 cut(s)	541
TatI	WGTACW	1 cut(s)	624
TfiI	GAWTC	3 cut(s)	582, 1597, 1899
Tru1I	TTAA	5 cut(s)	521, 786, 986, 1362, 1562
Tru9I	TTAA	5 cut(s)	521, 786, 986, 1362, 1562
TscAI	CASTG	3 cut(s)	352, 634, 673
TseFI	GTSAC	3 cut(s)	693, 1467, 1702
TseI	GCWGC	4 cut(s)	42, 534, 1037, 1153
Tsp45I	GTSAC	3 cut(s)	693, 1467, 1702
TspDTI	ATGAA	8 cut(s)	37, 146, 626, 628, 764, 927, 1454, 1835
TspGWI	ACGGA	1 cut(s)	1331
TspRI	CASTG	3 cut(s)	352, 634, 673
Tth111I	GACNNNGTC	1 cut(s)	338
VneI	GTGCAC	1 cut(s)	1325
VpaK11BI	GGWCC	2 cut(s)	271, 334
VspI	ATTAAT	1 cut(s)	986
XapI	RAATTY	4 cut(s)	419, 451, 947, 1223
XbaI	TCTAGA	2 cut(s)	70, 1390
XceI	RCATGY	1 cut(s)	875
XcmI	CCANNNNNNNNNTGG	2 cut(s)	344, 1766
XmiI	GTMKAC	2 cut(s)	342, 1404
XmnI	GAANNNNTTC	1 cut(s)	845
XspI	CTAG	9 cut(s)	54, 71, 113, 393, 441, 567, 792, 1391, 1527
ZraI	GACGTC	1 cut(s)	1402

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.