Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0006136

Physical Location & Seq

Genomic Coordinates Reverse (-)

16461490 .. 16473028

Gene Structure 11539 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1191800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1941 bp

ATGACTGCCCTATTTATACCCTTAGTTTTGATCCTACAATGCTGCTTCACAGCTACCTCATCCCACCCCCTAGACCCTCTAACCCCAACTGAGATCAACAAAGCTAGGCTCACAATTCAGAAGTCACACATTGGAAATCTTCCTAACCTCACCTTTCATTTTGTTGACACTGAAGAGCCAGAGAAAGCTGAAGTCCTCAAATGGTTATCTTCAAGCAATCAAAAAAGGTCCATCCATCCCCGCCAGGCCAAGGTGGTGGCTCGAGCCGGTGGTCAAACCCACGAGCTCATTGTGGACTTGGCCACCGGCTCTATCATATCCGATCATGTCCACACAGATCATGGAAACCCTCCTCTCACCTTTACCGAGCTTTTCCTAGCTAGTAAGCTTCCTCTCAGTCACTCCAAATTCATAAACTCAATTTCAGCAAGGGGATTGAATTTATCTGAAGTTTCATGCCTACCCTTTTCAATTGGATGGTATGGGGAAGAAATTACTAAGAGAGCTGTGAAAATCCAGTGCTTCTATAGAGGAGGATCAGTCAATGTTTTTACAAGGCCTATTGAGGGAATATCAATGCTAGTGGACCTTGATTTGATGAAAATTGCAGTGTACACTGATAGGTTCAGAGCTCCTTTGCCCAAAGCTCAAGGCACTGACTTCCAAACCCCAAAAGAAAATTCCAATTCTGCCCCTTACAACAAAACCAAAAGTGGCTTCCTCGTCTCAGGTCACAAGGTCAAATGGGAAAATTGGGTTTTTCATGTTGGGTTCAATGCTAGGGCAGGAAGTGTGATCTCTACAGCTTCTGTATTTGACTCCAGGAAGAAGAAGTACAGGAGTGTGCTGTACAAAGGGCACGTGTCCGAGACGTTCGTGCCATATATGGATCCTACAAGTGAATGGTATTTCAGGACATTTATGGACATTGGTGAATTTGGGTTCGGGAGATCAGCTGATAGTTTGCAGCCTCTGATTGACTGCCCGGAAAATGCTGAATATGTTGACGGGTTTATGGCTGGGGCTGATGGTAAGCCACTAAAGGTAGAAAGGGCCATTTGCATCTTTGAGAGGTACTCGGGTGATGTTGCAATGAGACATACTGAAATTAACGTTCCAGGCAAATTGATAACAAGTGGGCAGCAGGACAAAAGTTTGGTGGTTAGAATGGTGGCTACTGTTGGCAACTATGATTACGTTCTTGACTGGGAATTCCAGCAAAGTGGCACCATCAAAGTTGGGGTGGGTTTAACAGGTGTCTTGGAGGTAAAAGCAACTTCATACACAAGCAACGACCAAATAACGAAAAACGTTTACGGAACCTTGGTATCAGAAAACACCGTCGCGATTAACCACGACCACTTCCTCACATATATGCTAGACCTAGACGTCGATGGTAACGCCAACTCCTTTGTCAAGGCCAAGTTCCAAACGGCAAGAGCCAGTACCGTTAACCCAACATCACCAAGAAAGAGTTACTGGAAGGTCGTTAGGGAAACCATCAGGACTGAAGCCGAGGCGAGAATTTGGCTCGGCTTGGAGCCTGCCGAGTTGTTGATTGTGAACCCTAATAGTAAGACTAGGCTTGGAAATCAGGTTGGTTACCGGCTGATTACAGGACAGCCGGTAACTTCTCTTCTGGCTGATGATGATTACCCACAGATTAGGGCTTCTTATACCAAGCATCAAGTTTGGGTGACTGCCTATAATAAGTCAGAGAAGTGGGCTGGAGGGTTCTATGCTGATAGGAGCCATGGGGATGATGGCTTGGCTGTTTGGAGCCAGAGGAATAGAGCTATTGAAAACAAAGATATAGTATTGTGGTACACGGTGGGATTTCATCACATTCCATACCAAGAAGATTTCCCAGCTATGGCCACCCTTCATGGCGGATTCGAGCTACGCCCTGCAAATTTCTTCGAATCCAACCCATTGCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005618 GO:0005623 GO:0007154 GO:0007165 GO:0008131 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009888 GO:0009987 GO:0010033 GO:0010035 GO:0010087 GO:0010089 GO:0010941 GO:0016491 GO:0016638 GO:0016641 GO:0023052 GO:0030312 GO:0032502 GO:0032870 GO:0042221 GO:0043067 GO:0044464 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0052597 GO:0055114 GO:0065007 GO:0070887 GO:0071229 GO:0071241 GO:0071310 GO:0071395 GO:0071495 GO:0071944 GO:0090059 GO:0097184 GO:0097185 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00260 ko00350 ko00360 ko00410 ko00950 ko00960 ko01100 ko01110 map00260 map00350 map00360 map00410 map00950 map00960 map01100 map01110

Pfam Domains

Protein Families

Cu_amine_oxid Cu_amine_oxidN2 Cu_amine_oxidN3

Protein Analysis

647

Amino Acids

72.3

Weight (kDa)

7.69

Isoelectric Point (pI)

31.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu_amine_oxidN2	PF02727	22 - 108	6.1e-24	Copper amine oxidase, N2 domain
Cu_amine_oxidN3	PF02728	117 - 211	5.2e-22	Copper amine oxidase, N3 domain
Cu_amine_oxid	PF01179	239 - 645	1.5e-135	Copper amine oxidase, enzyme domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0006136)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14940
fragaria_vesca	FvH4_4g15350 FvH4_4g15390
malus_domestica	MD13G1191800.v1.1
prunus_persica	Prupe.1G012100_v2.0.a1 Prupe.1G012100_v2.0.a1
pyrus_communis	pycom13g16440
rosa_chinensis	RchiOBHm_Chr4g0416411 RchiOBHm_Chr5g0045871
rosa_laevigata	RLG00000007984 RLG00000034395
rosa_multiflora	Rmu_sc0001488.1_g000020
rosa_roxburghii	Rroxscaffold_1G00035130 Rroxscaffold_1G00035220 Rroxscaffold_5G00360240
rosa_rugosa	Rorug04G0141600 Rorug04G0141700 Rorug05G0226600
rosa_samantha	Rh4AG204000 Rh4BG201400 Rh4CG215200 Rh4DG201300 Rh5BG316100 Rh5DG326400
rosa_wichuraiana	Rw0G018920 Rw4G017270 Rw5G028820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1388
AatII	GACGTC	1 cut(s)	1392
AccB1I	GGYRCC	1 cut(s)	1226
AccII	CGCG	1 cut(s)	1346
AciI	CCGC	2 cut(s)	241, 1890
AclI	AACGTT	2 cut(s)	1113, 1311
AclWI	GGATC	4 cut(s)	25, 544, 884, 897
AcoI	YGGCCR	2 cut(s)	300, 1875
AcsI	RAATTY	7 cut(s)	407, 439, 679, 935, 1211, 1524, 1912
AcuI	CTGAAG	4 cut(s)	192, 210, 468, 1530
AcvI	CACGTG	1 cut(s)	862
AcyI	GRCGYC	1 cut(s)	1389
AfaI	GTAC	6 cut(s)	614, 836, 851, 1076, 1447, 1826
AfiI	CCNNNNNNNGG	3 cut(s)	250, 566, 1873
AflIII	ACRYGT	1 cut(s)	861
AgsI	TTSAA	5 cut(s)	213, 439, 471, 775, 1802
AjnI	CCWGG	3 cut(s)	243, 821, 1117
AjuI	GAANNNNNNNTTGG	4 cut(s)	664, 696, 701, 733
Alw21I	GWGCWC	2 cut(s)	288, 634
Alw26I	GTCTC	3 cut(s)	730, 863, 1090
AlwI	GGATC	4 cut(s)	25, 544, 884, 897
AlwNI	CAGNNNCTG	2 cut(s)	809, 973
Ama87I	CYCGRG	2 cut(s)	261, 1078
AoxI	GGCC	6 cut(s)	246, 300, 557, 1053, 1419, 1875
ApeKI	GCWGC	3 cut(s)	42, 967, 1141
ApoI	RAATTY	7 cut(s)	407, 439, 679, 935, 1211, 1524, 1912
AspS9I	GGNCC	3 cut(s)	228, 586, 1053
AsuC2I	CCSGG	1 cut(s)	986
AsuHPI	GGTGA	6 cut(s)	142, 349, 944, 1094, 1455, 1708
AsuII	TTCGAA	1 cut(s)	1920
AvaI	CYCGRG	2 cut(s)	261, 1078
AvaII	GGWCC	2 cut(s)	228, 586
BaeGI	GKGCMC	1 cut(s)	861
BaeI	ACNNNNGTAYC	4 cut(s)	1066, 1099, 1311, 1344
BalI	TGGCCA	2 cut(s)	302, 1877
BamHI	GGATCC	1 cut(s)	889
BanI	GGYRCC	1 cut(s)	1226
BanII	GRGCYC	2 cut(s)	288, 634
BarI	GAAGNNNNNNTAC	4 cut(s)	818, 850, 1620, 1652
BauI	CACGAG	1 cut(s)	281
BbrPI	CACGTG	1 cut(s)	862
Bbv12I	GWGCWC	2 cut(s)	288, 634
BbvI	GCAGC	3 cut(s)	29, 979, 1153
BccI	CCATC	8 cut(s)	239, 243, 471, 1022, 1238, 1388, 1508, 1757
BceAI	ACGGC	1 cut(s)	1449
BciT130I	CCWGG	3 cut(s)	245, 823, 1119
BcnI	CCSGG	1 cut(s)	986
BcoDI	GTCTC	3 cut(s)	730, 863, 1090
BfaI	CTAG	9 cut(s)	71, 105, 377, 381, 581, 780, 1379, 1385, 1581
BfmI	CTRYAG	2 cut(s)	526, 801
BisI	GCNGC	3 cut(s)	43, 968, 1142
BlsI	GCNGC	3 cut(s)	44, 969, 1143
Bme1390I	CCNGG	4 cut(s)	245, 823, 986, 1119
Bme18I	GGWCC	2 cut(s)	228, 586
BmeT110I	CYCGRG	2 cut(s)	261, 1078
BmgT120I	GGNCC	3 cut(s)	228, 586, 1053
BmiI	GGNNCC	6 cut(s)	891, 1228, 1321, 1542, 1751, 1781
BmrFI	CCNGG	4 cut(s)	245, 823, 986, 1119
BmrI	ACTGGG	1 cut(s)	1216
BmsI	GCATC	2 cut(s)	1071, 1693
BmuI	ACTGGG	1 cut(s)	1216
BplI	GAGNNNNNCTC	2 cut(s)	1061, 1093
BpmI	CTGGAG	2 cut(s)	805, 1749
Bpu14I	TTCGAA	1 cut(s)	1920
BpuEI	CTTGAG	1 cut(s)	633
BpuMI	CCSGG	1 cut(s)	986
BsaAI	YACGTR	1 cut(s)	862
BsaHI	GRCGYC	1 cut(s)	1389
BsaJI	CCNNGG	4 cut(s)	249, 1323, 1515, 1753
BsaXI	ACNNNNNCTCC	4 cut(s)	525, 555, 1391, 1421
Bsc4I	CCNNNNNNNGG	3 cut(s)	250, 566, 1873
Bse118I	RCCGGY	4 cut(s)	266, 305, 1605, 1624
Bse1I	ACTGG	4 cut(s)	517, 1211, 1443, 1484
Bse3DI	GCAATG	2 cut(s)	1098, 1931
BseBI	CCWGG	3 cut(s)	245, 823, 1119
BseDI	CCNNGG	4 cut(s)	249, 1323, 1515, 1753
BseGI	GGATG	5 cut(s)	59, 231, 235, 482, 1765
BseLI	CCNNNNNNNGG	3 cut(s)	250, 566, 1873
BseMI	GCAATG	2 cut(s)	1098, 1931
BseMII	CTCAG	3 cut(s)	81, 409, 741
BseNI	ACTGG	4 cut(s)	517, 1211, 1443, 1484
BseRI	GAGGAG	2 cut(s)	342, 546
BseSI	GKGCMC	1 cut(s)	861
BseXI	GCAGC	3 cut(s)	29, 979, 1153
BseYI	CCCAGC	2 cut(s)	1019, 1867
Bsh1236I	CGCG	1 cut(s)	1346
BshFI	GGCC	6 cut(s)	248, 302, 559, 1055, 1421, 1877
BshNI	GGYRCC	1 cut(s)	1226
BsiHKAI	GWGCWC	2 cut(s)	288, 634
BsiHKCI	CYCGRG	2 cut(s)	261, 1078
BsiSI	CCGG	5 cut(s)	267, 306, 986, 1606, 1625
BslI	CCNNNNNNNGG	3 cut(s)	250, 566, 1873
BsmAI	GTCTC	3 cut(s)	730, 863, 1090
BsmBI	CGTCTC	2 cut(s)	730, 863
BsnI	GGCC	6 cut(s)	248, 302, 559, 1055, 1421, 1877
BsoBI	CYCGRG	2 cut(s)	261, 1078
Bsp119I	TTCGAA	1 cut(s)	1920
Bsp1286I	GDGCHC	3 cut(s)	288, 634, 861
Bsp1407I	TGTACA	2 cut(s)	612, 849
Bsp143I	GATC	8 cut(s)	30, 93, 322, 337, 536, 795, 889, 950
Bsp19I	CCATGG	1 cut(s)	1753
Bsp68I	TCGCGA	1 cut(s)	1346
BspACI	CCGC	2 cut(s)	241, 1890
BspANI	GGCC	6 cut(s)	248, 302, 559, 1055, 1421, 1877
BspCNI	CTCAG	3 cut(s)	82, 408, 740
BspFNI	CGCG	1 cut(s)	1346
BspLI	GGNNCC	6 cut(s)	891, 1228, 1321, 1542, 1751, 1781
BspPI	GGATC	4 cut(s)	25, 544, 884, 897
BspQI	GCTCTTC	1 cut(s)	168
BspT104I	TTCGAA	1 cut(s)	1920
BspT107I	GGYRCC	1 cut(s)	1226
BsrDI	GCAATG	2 cut(s)	1098, 1931
BsrFI	RCCGGY	4 cut(s)	266, 305, 1605, 1624
BsrGI	TGTACA	2 cut(s)	612, 849
BsrI	ACTGG	4 cut(s)	517, 1211, 1443, 1484
BssAI	RCCGGY	4 cut(s)	266, 305, 1605, 1624
BssECI	CCNNGG	4 cut(s)	249, 1323, 1515, 1753
BssMI	GATC	8 cut(s)	30, 93, 322, 337, 536, 795, 889, 950
BssNI	GRCGYC	1 cut(s)	1389
BssSI	CACGAG	1 cut(s)	281
BssT1I	CCWWGG	3 cut(s)	249, 1323, 1753
Bst2BI	CACGAG	1 cut(s)	281
Bst2UI	CCWGG	3 cut(s)	245, 823, 1119
Bst4CI	ACNGT	4 cut(s)	1180, 1342, 1450, 1831
Bst6I	CTCTTC	2 cut(s)	168, 1641
BstACI	GRCGYC	1 cut(s)	1389
BstAUI	TGTACA	2 cut(s)	612, 849
BstBAI	YACGTR	1 cut(s)	862
BstBI	TTCGAA	1 cut(s)	1920
BstC8I	GCNNGC	1 cut(s)	1545
BstDEI	CTNAG	5 cut(s)	22, 90, 395, 498, 727
BstDSI	CCRYGG	1 cut(s)	1753
BstEII	GGTNACC	1 cut(s)	1601
BstF5I	GGATG	5 cut(s)	59, 231, 235, 482, 1765
BstFNI	CGCG	1 cut(s)	1346
BstKTI	GATC	8 cut(s)	33, 96, 325, 340, 539, 798, 892, 953
BstMAI	GTCTC	3 cut(s)	730, 863, 1090
BstMBI	GATC	8 cut(s)	30, 93, 322, 337, 536, 795, 889, 950
BstNI	CCWGG	3 cut(s)	245, 823, 1119
BstPI	GGTNACC	1 cut(s)	1601
BstSCI	CCNGG	4 cut(s)	243, 821, 984, 1117
BstSFI	CTRYAG	2 cut(s)	526, 801
BstSLI	GKGCMC	1 cut(s)	861
BstUI	CGCG	1 cut(s)	1346
BstV1I	GCAGC	3 cut(s)	29, 979, 1153
BstX2I	RGATCY	1 cut(s)	889
BstXI	CCANNNNNNTGG	2 cut(s)	256, 1223
BstYI	RGATCY	1 cut(s)	889
BsuRI	GGCC	6 cut(s)	248, 302, 559, 1055, 1421, 1877
BtgI	CCRYGG	1 cut(s)	1753
BtsCI	GGATG	5 cut(s)	59, 231, 235, 482, 1765
BtsI	GCAGTG	1 cut(s)	615
BtsIMutI	CAGTG	5 cut(s)	168, 524, 615, 615, 654
BtuMI	TCGCGA	1 cut(s)	1346
Cac8I	GCNNGC	1 cut(s)	1545
CaiI	CAGNNNCTG	2 cut(s)	809, 973
Cfr10I	RCCGGY	4 cut(s)	266, 305, 1605, 1624
Cfr13I	GGNCC	3 cut(s)	228, 586, 1053
Csp6I	GTAC	6 cut(s)	613, 835, 850, 1075, 1446, 1825
CspCI	CAANNNNNGTGG	2 cut(s)	564, 599
CviAII	CATG	6 cut(s)	326, 341, 456, 764, 1754, 1886
CviQI	GTAC	6 cut(s)	613, 835, 850, 1075, 1446, 1825
DdeI	CTNAG	5 cut(s)	22, 90, 395, 498, 727
DpnI	GATC	8 cut(s)	32, 95, 324, 339, 538, 797, 891, 952
DpnII	GATC	8 cut(s)	30, 93, 322, 337, 536, 795, 889, 950
DrdI	GACNNNNNNGTC	1 cut(s)	1388
DseDI	GACNNNNNNGTC	1 cut(s)	1388
EaeI	YGGCCR	2 cut(s)	300, 1875
Eam1104I	CTCTTC	2 cut(s)	168, 1641
EarI	CTCTTC	2 cut(s)	168, 1641
EciI	GGCGGA	1 cut(s)	1905
Ecl136II	GAGCTC	2 cut(s)	286, 632
Eco130I	CCWWGG	3 cut(s)	249, 1323, 1753
Eco147I	AGGCCT	1 cut(s)	559
Eco24I	GRGCYC	2 cut(s)	288, 634
Eco47I	GGWCC	2 cut(s)	228, 586
Eco53kI	GAGCTC	2 cut(s)	286, 632
Eco57I	CTGAAG	4 cut(s)	192, 210, 468, 1530
Eco72I	CACGTG	1 cut(s)	862
Eco88I	CYCGRG	2 cut(s)	261, 1078
Eco91I	GGTNACC	1 cut(s)	1601
EcoICRI	GAGCTC	2 cut(s)	286, 632
EcoO65I	GGTNACC	1 cut(s)	1601
EcoRI	GAATTC	1 cut(s)	1211
EcoRII	CCWGG	3 cut(s)	243, 821, 1117
EcoT14I	CCWWGG	3 cut(s)	249, 1323, 1753
EcoT38I	GRGCYC	2 cut(s)	288, 634
ErhI	CCWWGG	3 cut(s)	249, 1323, 1753
Esp3I	CGTCTC	2 cut(s)	730, 863
FaeI	CATG	6 cut(s)	329, 344, 459, 767, 1757, 1889
FatI	CATG	6 cut(s)	325, 340, 455, 763, 1753, 1885
FauI	CCCGC	1 cut(s)	248
Fnu4HI	GCNGC	3 cut(s)	43, 968, 1142
FokI	GGATG	5 cut(s)	46, 218, 222, 489, 1772
FriOI	GRGCYC	2 cut(s)	288, 634
Fsp4HI	GCNGC	3 cut(s)	43, 968, 1142
FspBI	CTAG	9 cut(s)	71, 105, 377, 381, 581, 780, 1379, 1385, 1581
GluI	GCNGC	3 cut(s)	43, 968, 1142
GsaI	CCCAGC	2 cut(s)	1023, 1871
GsuI	CTGGAG	2 cut(s)	805, 1749
HaeIII	GGCC	6 cut(s)	248, 302, 559, 1055, 1421, 1877
HapII	CCGG	5 cut(s)	267, 306, 986, 1606, 1625
Hin1I	GRCGYC	1 cut(s)	1389
Hin1II	CATG	6 cut(s)	329, 344, 459, 767, 1757, 1889
HincII	GTYRAC	3 cut(s)	166, 1006, 1453
HindII	GTYRAC	3 cut(s)	166, 1006, 1453
HindIII	AAGCTT	1 cut(s)	386
HinfI	GANTC	3 cut(s)	818, 1893, 1922
HpaI	GTTAAC	1 cut(s)	1453
HpaII	CCGG	5 cut(s)	267, 306, 986, 1606, 1625
HphI	GGTGA	6 cut(s)	142, 349, 944, 1094, 1455, 1708
Hpy188I	TCNGA	8 cut(s)	120, 322, 448, 629, 868, 975, 1333, 1717
Hpy188III	TCNNGA	5 cut(s)	913, 946, 1202, 1345, 1504
Hpy99I	CGWCG	2 cut(s)	1346, 1394
HpyAV	CCTTC	2 cut(s)	1477, 1892
HpyCH4III	ACNGT	4 cut(s)	1180, 1342, 1450, 1831
HpyCH4IV	ACGT	6 cut(s)	861, 872, 1113, 1197, 1311, 1389
HpyCH4V	TGCA	5 cut(s)	608, 967, 1062, 1091, 1910
HpyF3I	CTNAG	5 cut(s)	22, 90, 395, 498, 727
HpySE526I	ACGT	6 cut(s)	861, 872, 1113, 1197, 1311, 1389
Hsp92I	GRCGYC	1 cut(s)	1389
Hsp92II	CATG	6 cut(s)	329, 344, 459, 767, 1757, 1889
KspAI	GTTAAC	1 cut(s)	1453
Kzo9I	GATC	8 cut(s)	30, 93, 322, 337, 536, 795, 889, 950
LguI	GCTCTTC	1 cut(s)	168
LmnI	GCTCC	4 cut(s)	637, 1540, 1749, 1779
Lsp1109I	GCAGC	3 cut(s)	29, 979, 1153
LweI	GCATC	2 cut(s)	1071, 1693
MaeI	CTAG	9 cut(s)	71, 105, 377, 381, 581, 780, 1379, 1385, 1581
MaeII	ACGT	6 cut(s)	861, 872, 1113, 1197, 1311, 1389
MaeIII	GTNAC	8 cut(s)	123, 398, 731, 1397, 1475, 1601, 1627, 1696
MalI	GATC	8 cut(s)	32, 95, 324, 339, 538, 797, 891, 952
MboI	GATC	8 cut(s)	30, 93, 322, 337, 536, 795, 889, 950
MboII	GAAGA	9 cut(s)	131, 185, 201, 500, 838, 841, 1628, 1871, 1909
MfeI	CAATTG	1 cut(s)	471
MflI	RGATCY	1 cut(s)	889
MhlI	GDGCHC	3 cut(s)	288, 634, 861
MlsI	TGGCCA	2 cut(s)	302, 1877
MluNI	TGGCCA	2 cut(s)	302, 1877
MlyI	GAGTC	1 cut(s)	812
Mox20I	TGGCCA	2 cut(s)	302, 1877
MscI	TGGCCA	2 cut(s)	302, 1877
MseI	TTAA	4 cut(s)	1110, 1250, 1350, 1452
MslI	CAYNNNNRTG	2 cut(s)	1373, 1758
Msp20I	TGGCCA	2 cut(s)	302, 1877
MspA1I	CMGCKG	1 cut(s)	956
MspI	CCGG	5 cut(s)	267, 306, 986, 1606, 1625
MspR9I	CCNGG	4 cut(s)	245, 823, 986, 1119
MunI	CAATTG	1 cut(s)	471
MvaI	CCWGG	3 cut(s)	245, 823, 1119
MvnI	CGCG	1 cut(s)	1346
NciI	CCSGG	1 cut(s)	986
NcoI	CCATGG	1 cut(s)	1753
NdeII	GATC	8 cut(s)	30, 93, 322, 337, 536, 795, 889, 950
NlaIII	CATG	6 cut(s)	329, 344, 459, 767, 1757, 1889
NlaIV	GGNNCC	6 cut(s)	891, 1228, 1321, 1542, 1751, 1781
NmeAIII	GCCGAG	3 cut(s)	1512, 1540, 1573
NmuCI	GTSAC	4 cut(s)	123, 398, 731, 1696
NruI	TCGCGA	1 cut(s)	1346
NspV	TTCGAA	1 cut(s)	1920
PaeR7I	CTCGAG	1 cut(s)	261
PceI	AGGCCT	1 cut(s)	559
PciSI	GCTCTTC	1 cut(s)	168
PfeI	GAWTC	2 cut(s)	1893, 1922
PfoI	TCCNGGA	1 cut(s)	821
PkrI	GCNGC	3 cut(s)	44, 969, 1143
PleI	GAGTC	1 cut(s)	812
PmaCI	CACGTG	1 cut(s)	862
PmlI	CACGTG	1 cut(s)	862
PpsI	GAGTC	1 cut(s)	812
Ppu21I	YACGTR	1 cut(s)	862
Psp124BI	GAGCTC	2 cut(s)	288, 634
Psp1406I	AACGTT	2 cut(s)	1113, 1311
Psp6I	CCWGG	3 cut(s)	243, 821, 1117
PspCI	CACGTG	1 cut(s)	862
PspEI	GGTNACC	1 cut(s)	1601
PspFI	CCCAGC	2 cut(s)	1019, 1867
PspGI	CCWGG	3 cut(s)	243, 821, 1117
PspN4I	GGNNCC	6 cut(s)	891, 1228, 1321, 1542, 1751, 1781
PspPI	GGNCC	3 cut(s)	228, 586, 1053
PspXI	VCTCGAGB	1 cut(s)	261
PstNI	CAGNNNCTG	2 cut(s)	809, 973
PsuI	RGATCY	1 cut(s)	889
PvuII	CAGCTG	1 cut(s)	956
RruI	TCGCGA	1 cut(s)	1346
RsaI	GTAC	6 cut(s)	614, 836, 851, 1076, 1447, 1826
RsaNI	GTAC	6 cut(s)	613, 835, 850, 1075, 1446, 1825
RseI	CAYNNNNRTG	2 cut(s)	1373, 1758
SacI	GAGCTC	2 cut(s)	288, 634
SapI	GCTCTTC	1 cut(s)	168
SaqAI	TTAA	4 cut(s)	1110, 1250, 1350, 1452
SatI	GCNGC	3 cut(s)	43, 968, 1142
Sau3AI	GATC	8 cut(s)	30, 93, 322, 337, 536, 795, 889, 950
Sau96I	GGNCC	3 cut(s)	228, 586, 1053
SchI	GAGTC	1 cut(s)	812
ScrFI	CCNGG	4 cut(s)	245, 823, 986, 1119
SduI	GDGCHC	3 cut(s)	288, 634, 861
SfaNI	GCATC	2 cut(s)	1071, 1693
SfcI	CTRYAG	2 cut(s)	526, 801
Sfr274I	CTCGAG	1 cut(s)	261
SfuI	TTCGAA	1 cut(s)	1920
SinI	GGWCC	2 cut(s)	228, 586
SlaI	CTCGAG	1 cut(s)	261
SmiMI	CAYNNNNRTG	2 cut(s)	1373, 1758
SmlI	CTYRAG	2 cut(s)	261, 648
SmoI	CTYRAG	2 cut(s)	261, 648
SseBI	AGGCCT	1 cut(s)	559
SsiI	CCGC	2 cut(s)	241, 1890
SspMI	CTAG	9 cut(s)	71, 105, 377, 381, 581, 780, 1379, 1385, 1581
SstI	GAGCTC	2 cut(s)	288, 634
StuI	AGGCCT	1 cut(s)	559
StyD4I	CCNGG	4 cut(s)	243, 821, 984, 1117
StyI	CCWWGG	3 cut(s)	249, 1323, 1753
TaaI	ACNGT	4 cut(s)	1180, 1342, 1450, 1831
TaiI	ACGT	6 cut(s)	864, 875, 1116, 1200, 1314, 1392
TaqI	TCGA	4 cut(s)	262, 1392, 1896, 1920
TatI	WGTACW	3 cut(s)	612, 834, 849
TfiI	GAWTC	2 cut(s)	1893, 1922
Tru1I	TTAA	4 cut(s)	1110, 1250, 1350, 1452
Tru9I	TTAA	4 cut(s)	1110, 1250, 1350, 1452
TscAI	CASTG	5 cut(s)	175, 524, 615, 622, 661
TseFI	GTSAC	4 cut(s)	123, 398, 731, 1696
TseI	GCWGC	3 cut(s)	42, 967, 1141
Tsp45I	GTSAC	4 cut(s)	123, 398, 731, 1696
TspDTI	ATGAA	8 cut(s)	146, 400, 444, 614, 752, 1269, 1829, 1874
TspGWI	ACGGA	1 cut(s)	1332
TspRI	CASTG	5 cut(s)	175, 524, 615, 622, 661
VpaK11BI	GGWCC	2 cut(s)	228, 586
XapI	RAATTY	7 cut(s)	407, 439, 679, 935, 1211, 1524, 1912
XcmI	CCANNNNNNNNNTGG	2 cut(s)	338, 1760
XhoI	CTCGAG	1 cut(s)	261
XspI	CTAG	9 cut(s)	71, 105, 377, 381, 581, 780, 1379, 1385, 1581
ZraI	GACGTC	1 cut(s)	1390

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.