Rorug04G0141700

amine oxidase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Reverse (-)
23521357 .. 23521763
407 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0141700.1

Sequence Viewer

Length: 234 bp
ATGTGTGGGAGGGAGCCAAATTTTGAGCTTCCTGAAGAGGAGAAGCAGGAACTGATGAAGTTCAAGTGGGATGAATTCTTGGCGGTGACTTGTCACTCCATTAACAACAAAAAGCTCAAGAAGTGGCAGTGGTCTGAGACACTTCCATTACAAGATGGTGACTGGGATGACAAGCAAGAAGTAAATGGTCTGTCAACTTCGGAAGATGGGGAGGAAGACACACGACTCTCTTGA

Protein Analysis

77

Amino Acids

9.12

Weight (kDa)

4.46

Isoelectric Point (pI)

54.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 83
AcsI RAATTY 2 cut(s) 19, 74
AcuI CTGAAG 1 cut(s) 54
AgsI TTSAA 1 cut(s) 64
AluBI AGCT 2 cut(s) 28, 115
AluI AGCT 2 cut(s) 28, 115
Alw26I GTCTC 1 cut(s) 131
AlwNI CAGNNNCTG 1 cut(s) 52
ApoI RAATTY 2 cut(s) 19, 74
AsuHPI GGTGA 2 cut(s) 97, 170
BbsI GAAGAC 1 cut(s) 222
BccI CCATC 2 cut(s) 149, 200
BcoDI GTCTC 1 cut(s) 131
BmiI GGNNCC 1 cut(s) 15
BmrI ACTGGG 1 cut(s) 172
BmuI ACTGGG 1 cut(s) 172
BpiI GAAGAC 1 cut(s) 222
BpuEI CTTGAG 1 cut(s) 101
Bse1I ACTGG 1 cut(s) 167
BseGI GGATG 2 cut(s) 76, 172
BseMII CTCAG 1 cut(s) 126
BseNI ACTGG 1 cut(s) 167
BseRI GAGGAG 1 cut(s) 53
BsmAI GTCTC 1 cut(s) 131
BspACI CCGC 1 cut(s) 83
BspCNI CTCAG 1 cut(s) 127
BspLI GGNNCC 1 cut(s) 15
BsrI ACTGG 1 cut(s) 167
Bst6I CTCTTC 1 cut(s) 30
BstDEI CTNAG 1 cut(s) 135
BstF5I GGATG 2 cut(s) 76, 172
BstMAI GTCTC 1 cut(s) 131
BstV2I GAAGAC 1 cut(s) 222
BtsCI GGATG 2 cut(s) 76, 172
BtsI GCAGTG 1 cut(s) 134
BtsIMutI CAGTG 1 cut(s) 134
CaiI CAGNNNCTG 1 cut(s) 52
CviJI RGCY 3 cut(s) 16, 28, 115
CviKI_1 RGCY 3 cut(s) 16, 28, 115
DdeI CTNAG 1 cut(s) 135
Eam1104I CTCTTC 1 cut(s) 30
EarI CTCTTC 1 cut(s) 30
Eco57I CTGAAG 1 cut(s) 54
EcoRI GAATTC 1 cut(s) 74
FokI GGATG 2 cut(s) 83, 179
HincII GTYRAC 1 cut(s) 195
HindII GTYRAC 1 cut(s) 195
HinfI GANTC 1 cut(s) 225
HphI GGTGA 2 cut(s) 97, 170
Hpy166II GTNNAC 1 cut(s) 195
Hpy188I TCNGA 2 cut(s) 136, 202
Hpy188III TCNNGA 3 cut(s) 32, 118, 231
Hpy8I GTNNAC 1 cut(s) 195
HpyF3I CTNAG 1 cut(s) 135
LmnI GCTCC 1 cut(s) 13
LpnPI CCDG 3 cut(s) 32, 45, 148
MaeIII GTNAC 3 cut(s) 85, 92, 158
MboII GAAGA 3 cut(s) 47, 215, 227
MluCI AATT 2 cut(s) 19, 74
MlyI GAGTC 1 cut(s) 219
MnlI CCTC 3 cut(s) 3, 31, 205
MseI TTAA 1 cut(s) 102
NlaIV GGNNCC 1 cut(s) 15
NmuCI GTSAC 3 cut(s) 85, 92, 158
PleI GAGTC 1 cut(s) 219
PpsI GAGTC 1 cut(s) 219
PspN4I GGNNCC 1 cut(s) 15
PstNI CAGNNNCTG 1 cut(s) 52
SaqAI TTAA 1 cut(s) 102
SchI GAGTC 1 cut(s) 219
SetI ASST 2 cut(s) 30, 117
SmlI CTYRAG 1 cut(s) 116
SmoI CTYRAG 1 cut(s) 116
Sse9I AATT 2 cut(s) 19, 74
SsiI CCGC 1 cut(s) 83
TasI AATT 2 cut(s) 19, 74
Tru1I TTAA 1 cut(s) 102
Tru9I TTAA 1 cut(s) 102
TscAI CASTG 1 cut(s) 134
TseFI GTSAC 3 cut(s) 85, 92, 158
Tsp45I GTSAC 3 cut(s) 85, 92, 158
TspDTI ATGAA 2 cut(s) 71, 87
TspRI CASTG 1 cut(s) 134
XapI RAATTY 2 cut(s) 19, 74
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.