Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0008379

Physical Location & Seq

Genomic Coordinates Forward (+)

19250887 .. 19260963

Gene Structure 10077 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g15540.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1749 bp

ATGTTTAATTATAAAACAAAGCCAACGAAGCCCAAAGTAACCCATACCGCTTTTTGGAGACGACCTCCTTTCCAGCTCTCCCACTCTCCCTCCTCCATCTTCTTCCTTCTTTTTCAACCCTCTCCTCTCCTGCATCACAATTCTCTCTCTTACCAAAACATGGCTGGAGGTAACCACCCCAAGGGCCCACCCCACAAGCCCTCCTCTTCCTCCTCCGCTGCCTCCAACCGCAAATCTCGCTGGGAATCCTCCCCCTCCACCAACAACAAGAACAACCAAAACCACCGCAACAAAAACCCACCCGACCCGAAACCCGCCACCGGCCCATCCCCCAAACCCGGCAAAACCGCCAGCCCCGCCAATCCGAAACACCCGCCGGCCCCCTCTCCCGGCGCCGCGCCTCCTTTCCCCTTTCCGGACCCCTCCTCCTTCGGCCCGCCGCCTCCGCCCGTCTACGGCTTCCACAACCTCGAGCGCCGCACCATCGTCCTCGCCGACGGTACCGTCCGCTCCTACTTCGCTCTCCCGCCAGATTACCAGGACTTCCCTCCGCCGCACATGGACCCCTCGGGTCGGTTCTTGCCGTTCGGACCGGGCGGGCCCGCCCCGGACTACTGGAACTCGCTTGGGATTGACGGCCGTGGTGGACCCCAGGAAGGCTCGTCGATGAAGAGGAAGTTTGGGGAGGAAGAGGAGCATAGGGATAAGGGAGAAGAATTGGCGAAACGACGGCAGCAGTTGGTGCAATTGGGGAACCCGAATGGGTTTCCGGCGGGTCCGAGTAGCCCGTTTAGGCGTGAGATGGGGGCCCAGTCCAGGAGCGGCGATGATCCGAGGGCTTCGAAGTTCATGAGGACTGGTGGAGGTTTTGAAAATGTGGGGTTTAGGCAAAGCGGTGGCAGCGGAGGTGGTGGTGGTGATAATGTGGGGCATAAGTATCTTCAGGTTGACCAGGCTGCACTGAAGAAGGCATTTCTGTACTTTGCGAAGGTAATTAATGAGAATGGAGCGCAGAAGAAGATTTACATTGAGGATGGGAAGCAGGGCCGGCTTAATTGTCTTGCTTGTGGCACCACTGGCAGGTCTGCAAAAGATTTTCCGGATATGCATAGTCTCATTATGCACAGTTACAACACAGACAATGCGGACATTCGTGTGGATCACTTGGGCTTACACAAGGCTCTTTGTGTTTTAATGGGGTGGAACTACTTGAAGCCTCCTGATAACTCAAAGGCATATCAGTTTCTTTCCGCTGATGAAGCAGCAGCAAATCAAGATGACCTGATAATGTGGCCTCCCATGGTGATAATTCATAATACGCTTACAGGAAAGAGTAAAGATGGGCGCATGGAGGGTTTGGGCAATAAAGCAATGGATAGTTATATACGAGCTCTTGGGTTTGGGAGCGGCAAGTCGAAATCCCTGTATGGTAGAGATGGTCATTTGGGAACAACCATAATCAAGTTTTCAGCTGATGAAGCGGGCCTCAAGGAGGCCTTGCGAATGACAGAATTCTTTGAGAAAGACAATCACGGACGCAGGGCTTGGTATCATGTTCAACCCCTCACAATGGGCAATAAGGATGATGAGAACAATCCTTACCTTGTGAAGTTAGATGAAAAGACTCGGGAAAAGAAGAGGGTCTTTTATGGTTACCTAGGAACTGCCTCTGATCTCGAAAAAGTTGATTTTGACACGAGAAAGAAAGCTGCCATTGAAAGCTGGAGAGAATTCAAACCTCCCAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

583

Amino Acids

64.28

Weight (kDa)

9.57

Isoelectric Point (pI)

53.19

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008379)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22430
fragaria_vesca	FvH4_4g15540 FvH4_4g15540 FvH4_4g15540 FvH4_4g15540
malus_domestica	MD13G1193000.v1.1 MD16G1193900.v1.1
prunus_persica	Prupe.1G013600_v2.0.a1
pyrus_communis	pycom13g16530 pycom16g16360
rosa_chinensis	RchiOBHm_Chr4g0416221
rosa_laevigata	RLG00000008005
rosa_multiflora	Rmu_co7965312.1_g000001 Rmu_sc0001145.1_g000005 Rmu_sc0032525.1_g000002
rosa_roxburghii	Rroxscaffold_5G00360070
rosa_rugosa	Rorug04G0140000.1 Rorug04G0140100
rosa_samantha	Rh4AG202000 Rh4BG199400 Rh4CG213900 Rh4DG199200
rosa_wichuraiana	Rw4G017080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	12
AasI	GACNNNNNNGTC	1 cut(s)	503
Acc36I	ACCTGC	1 cut(s)	1071
Acc65I	GGTACC	1 cut(s)	500
AccB1I	GGYRCC	3 cut(s)	392, 500, 1070
AccB7I	CCANNNNNTGG	1 cut(s)	160
AccBSI	CCGCTC	3 cut(s)	510, 822, 1407
AccI	GTMKAC	1 cut(s)	453
AccII	CGCG	1 cut(s)	398
AccIII	TCCGGA	2 cut(s)	415, 1099
AclWI	GGATC	2 cut(s)	824, 1167
AcoI	YGGCCR	1 cut(s)	637
AcsI	RAATTY	2 cut(s)	1511, 1730
AcuI	CTGAAG	2 cut(s)	926, 983
AcyI	GRCGYC	1 cut(s)	393
AfaI	GTAC	2 cut(s)	502, 980
AgsI	TTSAA	6 cut(s)	116, 872, 1213, 1559, 1718, 1735
AjnI	CCWGG	4 cut(s)	537, 651, 815, 951
AluBI	AGCT	5 cut(s)	76, 1391, 1472, 1709, 1722
AluI	AGCT	5 cut(s)	76, 1391, 1472, 1709, 1722
Alw21I	GWGCWC	1 cut(s)	1393
Alw26I	GTCTC	2 cut(s)	52, 1118
AlwI	GGATC	2 cut(s)	824, 1167
Ama87I	CYCGRG	3 cut(s)	470, 568, 1626
Aor13HI	TCCGGA	2 cut(s)	415, 1099
ApaI	GGGCCC	3 cut(s)	188, 603, 811
ApeKI	GCWGC	7 cut(s)	218, 733, 900, 956, 1262, 1265, 1709
ApoI	RAATTY	2 cut(s)	1511, 1730
AseI	ATTAAT	1 cut(s)	996
Asp718I	GGTACC	1 cut(s)	500
AspA2I	CCTAGG	1 cut(s)	1657
AspLEI	GCGC	5 cut(s)	395, 400, 477, 1012, 1347
AsuC2I	CCSGG	4 cut(s)	339, 390, 594, 608
AsuHPI	GGTGA	2 cut(s)	929, 1315
AsuII	TTCGAA	1 cut(s)	842
AvaI	CYCGRG	3 cut(s)	470, 568, 1626
AvaII	GGWCC	5 cut(s)	418, 562, 590, 647, 776
AvrII	CCTAGG	1 cut(s)	1657
BaeGI	GKGCMC	3 cut(s)	188, 603, 811
BanI	GGYRCC	3 cut(s)	392, 500, 1070
BanII	GRGCYC	4 cut(s)	188, 603, 811, 1393
BarI	GAAGNNNNNNTAC	2 cut(s)	1007, 1039
BauI	CACGAG	1 cut(s)	1696
Bbv12I	GWGCWC	1 cut(s)	1393
BbvI	GCAGC	7 cut(s)	205, 745, 912, 943, 1274, 1277, 1696
BccI	CCATC	7 cut(s)	104, 334, 491, 796, 1028, 1334, 1430
BceAI	ACGGC	5 cut(s)	472, 568, 624, 652, 746
BciT130I	CCWGG	4 cut(s)	539, 653, 817, 953
BcnI	CCSGG	4 cut(s)	339, 390, 594, 608
BcoDI	GTCTC	2 cut(s)	52, 1118
BfaI	CTAG	1 cut(s)	1658
BfoI	RGCGCY	2 cut(s)	396, 478
BfuAI	ACCTGC	1 cut(s)	1071
BlnI	CCTAGG	1 cut(s)	1657
Bme1390I	CCNGG	8 cut(s)	339, 390, 539, 594, 608, 653, 817, 953
Bme18I	GGWCC	5 cut(s)	418, 562, 590, 647, 776
BmeT110I	CYCGRG	3 cut(s)	470, 568, 1626
BmrFI	CCNGG	8 cut(s)	339, 390, 539, 594, 608, 653, 817, 953
BmrI	ACTGGG	1 cut(s)	805
BmsI	GCATC	1 cut(s)	142
BmuI	ACTGGG	1 cut(s)	805
BplI	GAGNNNNNCTC	2 cut(s)	49, 81
BpmI	CTGGAG	2 cut(s)	186, 1744
Bpu14I	TTCGAA	1 cut(s)	842
BpuEI	CTTGAG	1 cut(s)	1472
BpuMI	CCSGG	4 cut(s)	339, 390, 594, 608
BsaHI	GRCGYC	1 cut(s)	393
BsaJI	CCNNGG	8 cut(s)	180, 567, 606, 640, 651, 833, 1299, 1657
BsaWI	WCCGGW	2 cut(s)	415, 1099
BsaXI	ACNNNNNCTCC	6 cut(s)	74, 104, 185, 215, 410, 440
Bse118I	RCCGGY	3 cut(s)	320, 376, 1047
Bse1I	ACTGG	4 cut(s)	620, 811, 862, 1081
Bse3DI	GCAATG	1 cut(s)	1377
BseAI	TCCGGA	2 cut(s)	415, 1099
BseBI	CCWGG	4 cut(s)	539, 653, 817, 953
BseDI	CCNNGG	8 cut(s)	180, 567, 606, 640, 651, 833, 1299, 1657
BseGI	GGATG	3 cut(s)	326, 1039, 1588
BseMI	GCAATG	1 cut(s)	1377
BseNI	ACTGG	4 cut(s)	620, 811, 862, 1081
BseRI	GAGGAG	6 cut(s)	82, 114, 193, 202, 415, 707
BseSI	GKGCMC	3 cut(s)	188, 603, 811
BseX3I	CGGCCG	1 cut(s)	637
BseXI	GCAGC	7 cut(s)	205, 745, 912, 943, 1274, 1277, 1696
BseYI	CCCAGC	1 cut(s)	240
BsgI	GTGCAG	1 cut(s)	942
Bsh1236I	CGCG	1 cut(s)	398
Bsh1285I	CGRYCG	1 cut(s)	640
BshNI	GGYRCC	3 cut(s)	392, 500, 1070
BsiEI	CGRYCG	1 cut(s)	640
BsiHKAI	GWGCWC	1 cut(s)	1393
BsiHKCI	CYCGRG	3 cut(s)	470, 568, 1626
BsmAI	GTCTC	2 cut(s)	52, 1118
BsmBI	CGTCTC	1 cut(s)	52
BsoBI	CYCGRG	3 cut(s)	470, 568, 1626
Bsp119I	TTCGAA	1 cut(s)	842
Bsp120I	GGGCCC	3 cut(s)	184, 599, 807
Bsp1286I	GDGCHC	4 cut(s)	188, 603, 811, 1393
Bsp13I	TCCGGA	2 cut(s)	415, 1099
Bsp143I	GATC	3 cut(s)	829, 1159, 1672
Bsp19I	CCATGG	1 cut(s)	1299
BspEI	TCCGGA	2 cut(s)	415, 1099
BspFNI	CGCG	1 cut(s)	398
BspHI	TCATGA	1 cut(s)	849
BspMI	ACCTGC	1 cut(s)	1071
BspPI	GGATC	2 cut(s)	824, 1167
BspT104I	TTCGAA	1 cut(s)	842
BspT107I	GGYRCC	3 cut(s)	392, 500, 1070
BsrBI	CCGCTC	3 cut(s)	510, 822, 1407
BsrDI	GCAATG	1 cut(s)	1377
BsrFI	RCCGGY	3 cut(s)	320, 376, 1047
BsrI	ACTGG	4 cut(s)	620, 811, 862, 1081
BssAI	RCCGGY	3 cut(s)	320, 376, 1047
BssECI	CCNNGG	8 cut(s)	180, 567, 606, 640, 651, 833, 1299, 1657
BssMI	GATC	3 cut(s)	829, 1159, 1672
BssNI	GRCGYC	1 cut(s)	393
BssSI	CACGAG	1 cut(s)	1696
BssT1I	CCWWGG	3 cut(s)	180, 1299, 1657
Bst2BI	CACGAG	1 cut(s)	1696
Bst2UI	CCWGG	4 cut(s)	539, 653, 817, 953
Bst4CI	ACNGT	3 cut(s)	500, 505, 1127
Bst6I	CTCTTC	4 cut(s)	211, 665, 684, 1631
BstACI	GRCGYC	1 cut(s)	393
BstAPI	GCANNNNNTGC	1 cut(s)	742
BstBI	TTCGAA	1 cut(s)	842
BstC8I	GCNNGC	7 cut(s)	352, 378, 437, 599, 603, 1049, 1483
BstDSI	CCRYGG	2 cut(s)	640, 1299
BstEII	GGTNACC	2 cut(s)	170, 1652
BstENI	CCTNNNNNAGG	1 cut(s)	1490
BstF5I	GGATG	3 cut(s)	326, 1039, 1588
BstFNI	CGCG	1 cut(s)	398
BstH2I	RGCGCY	2 cut(s)	396, 478
BstHHI	GCGC	5 cut(s)	395, 400, 477, 1012, 1347
BstKTI	GATC	3 cut(s)	832, 1162, 1675
BstMAI	GTCTC	2 cut(s)	52, 1118
BstMBI	GATC	3 cut(s)	829, 1159, 1672
BstMCI	CGRYCG	1 cut(s)	640
BstNI	CCWGG	4 cut(s)	539, 653, 817, 953
BstPI	GGTNACC	2 cut(s)	170, 1652
BstSCI	CCNGG	8 cut(s)	337, 388, 537, 592, 606, 651, 815, 951
BstSLI	GKGCMC	3 cut(s)	188, 603, 811
BstUI	CGCG	1 cut(s)	398
BstV1I	GCAGC	7 cut(s)	205, 745, 912, 943, 1274, 1277, 1696
BstZI	CGGCCG	1 cut(s)	637
BtgI	CCRYGG	2 cut(s)	640, 1299
BtgZI	GCGATG	1 cut(s)	840
BtsCI	GGATG	3 cut(s)	326, 1039, 1588
BtsIMutI	CAGTG	2 cut(s)	959, 1074
BveI	ACCTGC	1 cut(s)	1071
Cac8I	GCNNGC	7 cut(s)	352, 378, 437, 599, 603, 1049, 1483
CciI	TCATGA	1 cut(s)	849
CfoI	GCGC	5 cut(s)	395, 400, 477, 1012, 1347
Cfr10I	RCCGGY	3 cut(s)	320, 376, 1047
CpoI	CGGWCCG	1 cut(s)	590
CseI	GACGC	1 cut(s)	1545
Csp6I	GTAC	2 cut(s)	501, 979
CspI	CGGWCCG	1 cut(s)	590
CviAII	CATG	6 cut(s)	160, 559, 850, 1300, 1348, 1553
CviQI	GTAC	2 cut(s)	501, 979
DinI	GGCGCC	1 cut(s)	394
DpnI	GATC	3 cut(s)	831, 1161, 1674
DpnII	GATC	3 cut(s)	829, 1159, 1672
DrdI	GACNNNNNNGTC	1 cut(s)	503
DseDI	GACNNNNNNGTC	1 cut(s)	503
EaeI	YGGCCR	1 cut(s)	637
EagI	CGGCCG	1 cut(s)	637
Eam1104I	CTCTTC	4 cut(s)	211, 665, 684, 1631
EarI	CTCTTC	4 cut(s)	211, 665, 684, 1631
EciI	GGCGGA	2 cut(s)	435, 540
Ecl136II	GAGCTC	1 cut(s)	1391
EclXI	CGGCCG	1 cut(s)	637
Eco130I	CCWWGG	3 cut(s)	180, 1299, 1657
Eco147I	AGGCCT	1 cut(s)	1496
Eco24I	GRGCYC	4 cut(s)	188, 603, 811, 1393
Eco47I	GGWCC	5 cut(s)	418, 562, 590, 647, 776
Eco52I	CGGCCG	1 cut(s)	637
Eco53kI	GAGCTC	1 cut(s)	1391
Eco57I	CTGAAG	2 cut(s)	926, 983
Eco88I	CYCGRG	3 cut(s)	470, 568, 1626
Eco91I	GGTNACC	2 cut(s)	170, 1652
EcoICRI	GAGCTC	1 cut(s)	1391
EcoNI	CCTNNNNNAGG	1 cut(s)	1490
EcoO109I	RGGNCCY	2 cut(s)	184, 807
EcoO65I	GGTNACC	2 cut(s)	170, 1652
EcoRI	GAATTC	2 cut(s)	1511, 1730
EcoRII	CCWGG	4 cut(s)	537, 651, 815, 951
EcoT14I	CCWWGG	3 cut(s)	180, 1299, 1657
EcoT22I	ATGCAT	1 cut(s)	1110
EcoT38I	GRGCYC	4 cut(s)	188, 603, 811, 1393
EgeI	GGCGCC	1 cut(s)	394
EheI	GGCGCC	1 cut(s)	394
ErhI	CCWWGG	3 cut(s)	180, 1299, 1657
Esp3I	CGTCTC	1 cut(s)	52
FaeI	CATG	6 cut(s)	163, 562, 853, 1303, 1351, 1556
FalI	AAGNNNNNCTT	4 cut(s)	1481, 1513, 1628, 1660
FatI	CATG	6 cut(s)	159, 558, 849, 1299, 1347, 1552
FauI	CCCGC	9 cut(s)	322, 364, 381, 444, 534, 590, 610, 766, 1474
FblI	GTMKAC	1 cut(s)	453
FokI	GGATG	3 cut(s)	313, 1046, 1595
FriOI	GRGCYC	4 cut(s)	188, 603, 811, 1393
FspBI	CTAG	1 cut(s)	1658
GlaI	GCGC	5 cut(s)	394, 399, 476, 1011, 1346
GsaI	CCCAGC	1 cut(s)	244
GsuI	CTGGAG	2 cut(s)	186, 1744
HaeII	RGCGCY	2 cut(s)	396, 478
HgaI	GACGC	1 cut(s)	1545
HhaI	GCGC	5 cut(s)	395, 400, 477, 1012, 1347
Hin1I	GRCGYC	1 cut(s)	393
Hin1II	CATG	6 cut(s)	163, 562, 853, 1303, 1351, 1556
Hin6I	GCGC	5 cut(s)	393, 398, 475, 1010, 1345
HinP1I	GCGC	5 cut(s)	393, 398, 475, 1010, 1345
HincII	GTYRAC	1 cut(s)	949
HindII	GTYRAC	1 cut(s)	949
HinfI	GANTC	2 cut(s)	245, 1624
HphI	GGTGA	2 cut(s)	929, 1315
Hpy166II	GTNNAC	3 cut(s)	454, 647, 949
Hpy188I	TCNGA	5 cut(s)	366, 590, 780, 834, 1672
Hpy188III	TCNNGA	7 cut(s)	416, 850, 1100, 1220, 1274, 1628, 1676
Hpy8I	GTNNAC	3 cut(s)	454, 647, 949
Hpy99I	CGWCG	3 cut(s)	500, 667, 732
HpyAV	CCTTC	5 cut(s)	116, 439, 650, 961, 982
HpyCH4III	ACNGT	3 cut(s)	500, 505, 1127
HpyCH4V	TGCA	6 cut(s)	133, 745, 959, 1088, 1108, 1123
Hsp92I	GRCGYC	1 cut(s)	393
Hsp92II	CATG	6 cut(s)	163, 562, 853, 1303, 1351, 1556
HspAI	GCGC	5 cut(s)	393, 398, 475, 1010, 1345
KasI	GGCGCC	1 cut(s)	392
Kpn2I	TCCGGA	2 cut(s)	415, 1099
KpnI	GGTACC	1 cut(s)	504
KroI	GCCGGC	2 cut(s)	376, 1047
KroNI	GCCGGC	2 cut(s)	378, 1049
Kzo9I	GATC	3 cut(s)	829, 1159, 1672
LmnI	GCTCC	5 cut(s)	515, 694, 819, 1007, 1404
Lsp1109I	GCAGC	7 cut(s)	205, 745, 912, 943, 1274, 1277, 1696
LweI	GCATC	1 cut(s)	142
MaeI	CTAG	1 cut(s)	1658
MaeIII	GTNAC	4 cut(s)	37, 170, 1127, 1652
MalI	GATC	3 cut(s)	831, 1161, 1674
MbiI	CCGCTC	3 cut(s)	510, 822, 1407
MboI	GATC	3 cut(s)	829, 1159, 1672
MfeI	CAATTG	1 cut(s)	746
MhlI	GDGCHC	4 cut(s)	188, 603, 811, 1393
MluCI	AATT	9 cut(s)	7, 139, 716, 746, 993, 1054, 1308, 1511, 1730
Mly113I	GGCGCC	1 cut(s)	393
MlyI	GAGTC	1 cut(s)	1618
MmeI	TCCRAC	1 cut(s)	249
Mph1103I	ATGCAT	1 cut(s)	1110
MroI	TCCGGA	2 cut(s)	415, 1099
MroNI	GCCGGC	2 cut(s)	376, 1047
MseI	TTAA	4 cut(s)	6, 996, 1053, 1193
MslI	CAYNNNNRTG	1 cut(s)	1154
MspA1I	CMGCKG	4 cut(s)	218, 903, 1253, 1472
MspR9I	CCNGG	8 cut(s)	339, 390, 539, 594, 608, 653, 817, 953
MteI	GCGCNGCGC	1 cut(s)	396
MunI	CAATTG	1 cut(s)	746
MvaI	CCWGG	4 cut(s)	539, 653, 817, 953
MvnI	CGCG	1 cut(s)	398
NaeI	GCCGGC	2 cut(s)	378, 1049
NarI	GGCGCC	1 cut(s)	393
NciI	CCSGG	4 cut(s)	339, 390, 594, 608
NcoI	CCATGG	1 cut(s)	1299
NdeII	GATC	3 cut(s)	829, 1159, 1672
NgoMIV	GCCGGC	2 cut(s)	376, 1047
NlaIII	CATG	6 cut(s)	163, 562, 853, 1303, 1351, 1556
NsiI	ATGCAT	1 cut(s)	1110
NspV	TTCGAA	1 cut(s)	842
PaeR7I	CTCGAG	1 cut(s)	470
PagI	TCATGA	1 cut(s)	849
PceI	AGGCCT	1 cut(s)	1496
PcsI	WCGNNNNNNNCGW	1 cut(s)	492
PdiI	GCCGGC	2 cut(s)	378, 1049
PfeI	GAWTC	1 cut(s)	245
PflMI	CCANNNNNTGG	1 cut(s)	160
PfoI	TCCNGGA	1 cut(s)	815
PleI	GAGTC	1 cut(s)	1618
PluTI	GGCGCC	1 cut(s)	396
PpsI	GAGTC	1 cut(s)	1618
PshBI	ATTAAT	1 cut(s)	996
PsiI	TTATAA	1 cut(s)	12
Psp124BI	GAGCTC	1 cut(s)	1393
Psp6I	CCWGG	4 cut(s)	537, 651, 815, 951
PspEI	GGTNACC	2 cut(s)	170, 1652
PspFI	CCCAGC	1 cut(s)	240
PspGI	CCWGG	4 cut(s)	537, 651, 815, 951
PspOMI	GGGCCC	3 cut(s)	184, 599, 807
PspXI	VCTCGAGB	1 cut(s)	470
PsrI	GAACNNNNNNTAC	2 cut(s)	1583, 1615
PvuII	CAGCTG	1 cut(s)	1472
RsaI	GTAC	2 cut(s)	502, 980
RsaNI	GTAC	2 cut(s)	501, 979
RseI	CAYNNNNRTG	1 cut(s)	1154
Rsr2I	CGGWCCG	1 cut(s)	590
RsrII	CGGWCCG	1 cut(s)	590
SacI	GAGCTC	1 cut(s)	1393
SaqAI	TTAA	4 cut(s)	6, 996, 1053, 1193
Sau3AI	GATC	3 cut(s)	829, 1159, 1672
SchI	GAGTC	1 cut(s)	1618
ScrFI	CCNGG	8 cut(s)	339, 390, 539, 594, 608, 653, 817, 953
SduI	GDGCHC	4 cut(s)	188, 603, 811, 1393
SfaNI	GCATC	1 cut(s)	142
SfoI	GGCGCC	1 cut(s)	394
Sfr274I	CTCGAG	1 cut(s)	470
SfuI	TTCGAA	1 cut(s)	842
SinI	GGWCC	5 cut(s)	418, 562, 590, 647, 776
SlaI	CTCGAG	1 cut(s)	470
SmiMI	CAYNNNNRTG	1 cut(s)	1154
SmlI	CTYRAG	2 cut(s)	470, 1487
SmoI	CTYRAG	2 cut(s)	470, 1487
Sse9I	AATT	9 cut(s)	7, 139, 716, 746, 993, 1054, 1308, 1511, 1730
SseBI	AGGCCT	1 cut(s)	1496
SspDI	GGCGCC	1 cut(s)	392
SspMI	CTAG	1 cut(s)	1658
SstI	GAGCTC	1 cut(s)	1393
StuI	AGGCCT	1 cut(s)	1496
StyD4I	CCNGG	8 cut(s)	337, 388, 537, 592, 606, 651, 815, 951
StyI	CCWWGG	3 cut(s)	180, 1299, 1657
TaaI	ACNGT	3 cut(s)	500, 505, 1127
TaqI	TCGA	5 cut(s)	471, 665, 842, 1415, 1677
TasI	AATT	9 cut(s)	7, 139, 716, 746, 993, 1054, 1308, 1511, 1730
TatI	WGTACW	1 cut(s)	978
TauI	GCSGC	6 cut(s)	398, 442, 480, 556, 825, 1410
TfiI	GAWTC	1 cut(s)	245
Tru1I	TTAA	4 cut(s)	6, 996, 1053, 1193
Tru9I	TTAA	4 cut(s)	6, 996, 1053, 1193
TscAI	CASTG	2 cut(s)	966, 1081
TseI	GCWGC	7 cut(s)	218, 733, 900, 956, 1262, 1265, 1709
TspDTI	ATGAA	6 cut(s)	683, 838, 1272, 1301, 1491, 1632
TspGWI	ACGGA	1 cut(s)	1548
TspRI	CASTG	2 cut(s)	966, 1081
Van91I	CCANNNNNTGG	1 cut(s)	160
VpaK11BI	GGWCC	5 cut(s)	418, 562, 590, 647, 776
VspI	ATTAAT	1 cut(s)	996
XagI	CCTNNNNNAGG	1 cut(s)	1490
XapI	RAATTY	2 cut(s)	1511, 1730
XcmI	CCANNNNNNNNNTGG	1 cut(s)	161
XhoI	CTCGAG	1 cut(s)	470
XmaJI	CCTAGG	1 cut(s)	1657
XmiI	GTMKAC	1 cut(s)	453
XspI	CTAG	1 cut(s)	1658
Zsp2I	ATGCAT	1 cut(s)	1110

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.