MD16G1193900.v1.1

XS domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
OG0008379
Physical Location & Seq
Forward (+)
17203397 .. 17212295
8899 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1193900.v1.1.491

Sequence Viewer

Length: 1593 bp
ATGGCCGGAGGTCCCCATCCCAAGGGCCCACCACTCCACAGGCCATCTTCTTCTGCCGCCGCCTCCAGCCGCAAATCTCGCTGGGAATCCTCGGCCAACGCCGCCGCCCCCAGCACCACCACCACCACCACCACCATCACCAACAACAAAAACCCACCCGATCCCAAATCCTCCAAGGCCAAAACCGGCCCATCCCCAAAACCCAGCCCCGCCCATCCCAAGCACCCGCCTGGCCCCTCTCCCGGAACCGCTCCCTTCCCCTTCTCCGACCCGGCTGCTTTCGGCCCACCACCTCCCCCGGTATACGATTTCCACATGCTCGAGCGCCGGACTTTTGTTCTTGCCGATGGTAGTGTTCGATCCTACTTCGCTCTTCCGCCCGATTATCAAGACTTTCCTCCGCCCATGAACCCGCCCCGCCGGTTCATGCCATTTGGTCCGGGTGGATCGGGCGGGCCGGGTCCGGATTACTGGAATTCGCTCGGGCTCGACGGGCGTGGACCTGCAGAAGGGCCCGCTAAGAGGAAGTACAGCGGAGAAGAGGAGCAGAGGGACAAGGCAGAAGAATTGGCGATGCGTCGGCAGCAACTTATGCAGTATGGGAATCCAAATGGGTTTTCGGTGGGTCCCGGAGGAGGTCGGCCAACGAGTAGTCCCTTTCGGCGGGAAACGGGTGGCGATGAGGGGAGGGCTAACAAGTACATGAGGATTGGTGGTGGTGGTGGAGGTCATGATAGTTTGGGGTTTAGGCAAGGCGTTGGTGGCGGAGGTGAGAATGCGGGTCTGAAGCATCTTCAAGTTGATCAGAGTGCGTTGAAGAAGGCGTTTCTTAACTTTGTGAAGCTGATTCATGAGAATACGCAGCAGAGGAAGACTTACTTGGAGGATGGGAAGCACGGCCGTCTGCATTGTCTTGCTTGTGTCAGGTCCTCTAAAGATTTTCCGGATATGCATAGTCTCATCATGCACAGTTACAACTCTGATAGTGCTGACATGCGGGTGGATCACTTGGGGTTGCACAAGGCTTTGTGTGTTCTAATGGGGTGGGACTACTTGAAGCCCCCGGATAACTCAAAAGCATATCAGTTTCTTTCTGCTGAAGCAGCAGCAGCAAATGTGGATGATCTGATTATGTGGCCACCTGTGGTGATAATTCATAATACAGTTACAGGAAAGAGTAAAGATGGCCGCATGGAGGGTTTGGGCAATAAAGCAATGGATAGTACTATTAGAGATCTTGGATTTGGAAGTGGGAAGTCGAAATCCTTGTACGGTAGAGATGGTCATTTGGGTATGACTCTGGTTAAGTTTTCCGGTGACGAAGCAGGCCTTAAGGACGCCATTCGAATGGCAGAGTTCTTTGAGAAGGAAAATCATGGACGCAGGGGCTGGGCTCGTGTACAGCCCCCAATGCTCGGCAGTAAGGATGATGAAATGAATCCAAACCTTGTGAAGTTTGACGAAAAGACGCGGGAGAAGAAGAGGATCCTATATGCCTATCTCGGAACTGCTTATGATCTAGACAAAGTTGATTTTGACACAAGAAAGAAGGTCGTGATTGAAAGCCTTGGGGAACACAAATCATCCAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
XS

Protein Analysis

531

Amino Acids

57.65

Weight (kDa)

9.39

Isoelectric Point (pI)

50.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
XS PF03468 374 - 508 1.8e-25 XS domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 511
AccBSI CCGCTC 1 cut(s) 251
AccI GTMKAC 1 cut(s) 303
AccII CGCG 1 cut(s) 1471
AccIII TCCGGA 2 cut(s) 463, 943
AclWI GGATC 6 cut(s) 155, 354, 454, 1011, 1480, 1493
AcoI YGGCCR 6 cut(s) 3, 93, 641, 898, 1136, 1186
AcsI RAATTY 1 cut(s) 475
AcuI CTGAAG 2 cut(s) 806, 1119
AcyI GRCGYC 1 cut(s) 1338
AfaI GTAC 5 cut(s) 530, 701, 1225, 1271, 1401
AfiI CCNNNNNNNGG 8 cut(s) 22, 242, 509, 522, 635, 663, 1195, 1415
AflII CTTAAG 1 cut(s) 1331
AgsI TTSAA 4 cut(s) 797, 817, 1057, 1562
AjnI CCWGG 1 cut(s) 229
AjuI GAANNNNNNNTTGG 4 cut(s) 601, 633, 863, 895
AluBI AGCT 1 cut(s) 844
AluI AGCT 1 cut(s) 844
Alw26I GTCTC 1 cut(s) 962
AlwI GGATC 6 cut(s) 155, 354, 454, 1011, 1480, 1493
AlwNI CAGNNNCTG 1 cut(s) 1389
Ama87I CYCGRG 2 cut(s) 320, 482
Aor13HI TCCGGA 2 cut(s) 463, 943
ApaI GGGCCC 2 cut(s) 29, 516
ApeKI GCWGC 6 cut(s) 275, 583, 862, 1103, 1106, 1109
ApoI RAATTY 1 cut(s) 475
AspLEI GCGC 1 cut(s) 327
AsuC2I CCSGG 7 cut(s) 243, 272, 299, 441, 459, 630, 1064
AsuHPI GGTGA 4 cut(s) 130, 782, 1159, 1328
AsuII TTCGAA 1 cut(s) 1345
AvaI CYCGRG 2 cut(s) 320, 482
AvaII GGWCC 6 cut(s) 11, 437, 461, 500, 626, 927
BaeGI GKGCMC 2 cut(s) 29, 516
BalI TGGCCA 1 cut(s) 1138
BamHI GGATCC 1 cut(s) 1485
BanII GRGCYC 4 cut(s) 29, 489, 516, 1396
BauI CACGAG 1 cut(s) 1395
BbsI GAAGAC 1 cut(s) 878
BbvI GCAGC 6 cut(s) 262, 595, 874, 1115, 1118, 1121
BccI CCATC 9 cut(s) 24, 52, 143, 199, 222, 341, 881, 1178, 1274
BceAI ACGGC 2 cut(s) 885, 913
BcgI CGANNNNNNTGC 2 cut(s) 257, 291
BciT130I CCWGG 1 cut(s) 231
BclI TGATCA 1 cut(s) 802
BcnI CCSGG 7 cut(s) 243, 272, 299, 441, 459, 630, 1064
BcoDI GTCTC 1 cut(s) 962
BfaI CTAG 1 cut(s) 1520
BfmI CTRYAG 1 cut(s) 504
BfoI RGCGCY 1 cut(s) 328
BfrI CTTAAG 1 cut(s) 1331
BfuAI ACCTGC 1 cut(s) 511
BglII AGATCT 1 cut(s) 1234
BmcAI AGTACT 1 cut(s) 1225
Bme1390I CCNGG 8 cut(s) 231, 243, 272, 299, 441, 459, 630, 1064
Bme18I GGWCC 6 cut(s) 11, 437, 461, 500, 626, 927
BmeT110I CYCGRG 2 cut(s) 320, 482
BmiI GGNNCC 9 cut(s) 13, 27, 235, 247, 462, 514, 627, 628, 1487
BmrFI CCNGG 8 cut(s) 231, 243, 272, 299, 441, 459, 630, 1064
BmsI GCATC 2 cut(s) 564, 799
BpiI GAAGAC 1 cut(s) 878
BpmI CTGGAG 1 cut(s) 49
Bpu14I TTCGAA 1 cut(s) 1345
BpuMI CCSGG 7 cut(s) 243, 272, 299, 441, 459, 630, 1064
BsaHI GRCGYC 1 cut(s) 1338
BsaJI CCNNGG 6 cut(s) 21, 90, 174, 297, 1062, 1567
BsaWI WCCGGW 3 cut(s) 463, 943, 1313
Bsc4I CCNNNNNNNGG 8 cut(s) 22, 242, 509, 522, 635, 663, 1195, 1415
Bse118I RCCGGY 2 cut(s) 185, 420
Bse1I ACTGG 1 cut(s) 476
Bse3DI GCAATG 1 cut(s) 1221
BseAI TCCGGA 2 cut(s) 463, 943
BseBI CCWGG 1 cut(s) 231
BseDI CCNNGG 6 cut(s) 21, 90, 174, 297, 1062, 1567
BseGI GGATG 7 cut(s) 16, 191, 214, 892, 1126, 1432, 1583
BseLI CCNNNNNNNGG 8 cut(s) 22, 242, 509, 522, 635, 663, 1195, 1415
BseMI GCAATG 1 cut(s) 1221
BseNI ACTGG 1 cut(s) 476
BseRI GAGGAG 2 cut(s) 557, 648
BseSI GKGCMC 2 cut(s) 29, 516
BseX3I CGGCCG 1 cut(s) 898
BseXI GCAGC 6 cut(s) 262, 595, 874, 1115, 1118, 1121
BseYI CCCAGC 4 cut(s) 81, 110, 203, 1389
Bsh1236I CGCG 1 cut(s) 1471
Bsh1285I CGRYCG 1 cut(s) 901
BsiEI CGRYCG 1 cut(s) 901
BsiHKCI CYCGRG 2 cut(s) 320, 482
BslFI GGGAC 4 cut(s) 566, 612, 639, 1061
BslI CCNNNNNNNGG 8 cut(s) 22, 242, 509, 522, 635, 663, 1195, 1415
BsmAI GTCTC 1 cut(s) 962
BsmFI GGGAC 4 cut(s) 566, 612, 639, 1061
BsmI GAATGC 1 cut(s) 781
BsoBI CYCGRG 2 cut(s) 320, 482
Bsp119I TTCGAA 1 cut(s) 1345
Bsp120I GGGCCC 2 cut(s) 25, 512
Bsp1286I GDGCHC 4 cut(s) 29, 489, 516, 1396
Bsp13I TCCGGA 2 cut(s) 463, 943
Bsp1407I TGTACA 1 cut(s) 1399
Bsp143I GATC 9 cut(s) 160, 359, 446, 802, 1003, 1123, 1234, 1485, 1516
BspEI TCCGGA 2 cut(s) 463, 943
BspFNI CGCG 1 cut(s) 1471
BspHI TCATGA 2 cut(s) 730, 850
BspLI GGNNCC 9 cut(s) 13, 27, 235, 247, 462, 514, 627, 628, 1487
BspMAI CTGCAG 1 cut(s) 508
BspMI ACCTGC 1 cut(s) 511
BspPI GGATC 6 cut(s) 155, 354, 454, 1011, 1480, 1493
BspQI GCTCTTC 1 cut(s) 378
BspT104I TTCGAA 1 cut(s) 1345
BspTI CTTAAG 1 cut(s) 1331
BsrBI CCGCTC 1 cut(s) 251
BsrDI GCAATG 1 cut(s) 1221
BsrFI RCCGGY 2 cut(s) 185, 420
BsrGI TGTACA 1 cut(s) 1399
BsrI ACTGG 1 cut(s) 476
BssAI RCCGGY 2 cut(s) 185, 420
BssECI CCNNGG 6 cut(s) 21, 90, 174, 297, 1062, 1567
BssMI GATC 9 cut(s) 160, 359, 446, 802, 1003, 1123, 1234, 1485, 1516
BssNAI GTATAC 1 cut(s) 304
BssNI GRCGYC 1 cut(s) 1338
BssSI CACGAG 1 cut(s) 1395
BssT1I CCWWGG 3 cut(s) 21, 174, 1567
Bst1107I GTATAC 1 cut(s) 304
Bst2BI CACGAG 1 cut(s) 1395
Bst2UI CCWGG 1 cut(s) 231
Bst4CI ACNGT 3 cut(s) 971, 1165, 1274
Bst6I CTCTTC 3 cut(s) 378, 534, 1475
BstACI GRCGYC 1 cut(s) 1338
BstAFI CTTAAG 1 cut(s) 1331
BstAPI GCANNNNNTGC 1 cut(s) 592
BstAUI TGTACA 1 cut(s) 1399
BstBI TTCGAA 1 cut(s) 1345
BstC8I GCNNGC 3 cut(s) 455, 516, 1327
BstDEI CTNAG 1 cut(s) 519
BstENI CCTNNNNNAGG 1 cut(s) 507
BstF5I GGATG 7 cut(s) 16, 191, 214, 892, 1126, 1432, 1583
BstFNI CGCG 1 cut(s) 1471
BstH2I RGCGCY 1 cut(s) 328
BstHHI GCGC 1 cut(s) 327
BstKTI GATC 9 cut(s) 163, 362, 449, 805, 1006, 1126, 1237, 1488, 1519
BstMAI GTCTC 1 cut(s) 962
BstMBI GATC 9 cut(s) 160, 359, 446, 802, 1003, 1123, 1234, 1485, 1516
BstMCI CGRYCG 1 cut(s) 901
BstMWI GCNNNNNNNGC 9 cut(s) 78, 101, 493, 583, 592, 762, 1103, 1109, 1411
BstNI CCWGG 1 cut(s) 231
BstNSI RCATGY 2 cut(s) 319, 997
BstSCI CCNGG 8 cut(s) 229, 241, 270, 297, 439, 457, 628, 1062
BstSFI CTRYAG 1 cut(s) 504
BstSLI GKGCMC 2 cut(s) 29, 516
BstUI CGCG 1 cut(s) 1471
BstV1I GCAGC 6 cut(s) 262, 595, 874, 1115, 1118, 1121
BstV2I GAAGAC 1 cut(s) 878
BstX2I RGATCY 2 cut(s) 1234, 1485
BstXI CCANNNNNNTGG 1 cut(s) 1348
BstYI RGATCY 2 cut(s) 1234, 1485
BstZ17I GTATAC 1 cut(s) 304
BstZI CGGCCG 1 cut(s) 898
BtgZI GCGATG 2 cut(s) 587, 693
BtsCI GGATG 7 cut(s) 16, 191, 214, 892, 1126, 1432, 1583
BveI ACCTGC 1 cut(s) 511
Cac8I GCNNGC 3 cut(s) 455, 516, 1327
CaiI CAGNNNCTG 1 cut(s) 1389
CciI TCATGA 2 cut(s) 730, 850
CfoI GCGC 1 cut(s) 327
Cfr10I RCCGGY 2 cut(s) 185, 420
CseI GACGC 4 cut(s) 566, 1346, 1389, 1477
Csp6I GTAC 5 cut(s) 529, 700, 1224, 1270, 1400
CviQI GTAC 5 cut(s) 529, 700, 1224, 1270, 1400
DdeI CTNAG 1 cut(s) 519
DpnI GATC 9 cut(s) 162, 361, 448, 804, 1005, 1125, 1236, 1487, 1518
DpnII GATC 9 cut(s) 160, 359, 446, 802, 1003, 1123, 1234, 1485, 1516
EaeI YGGCCR 6 cut(s) 3, 93, 641, 898, 1136, 1186
EagI CGGCCG 1 cut(s) 898
Eam1104I CTCTTC 3 cut(s) 378, 534, 1475
EarI CTCTTC 3 cut(s) 378, 534, 1475
EciI GGCGGA 3 cut(s) 366, 390, 780
EclXI CGGCCG 1 cut(s) 898
Eco130I CCWWGG 3 cut(s) 21, 174, 1567
Eco147I AGGCCT 1 cut(s) 1329
Eco24I GRGCYC 4 cut(s) 29, 489, 516, 1396
Eco47I GGWCC 6 cut(s) 11, 437, 461, 500, 626, 927
Eco52I CGGCCG 1 cut(s) 898
Eco57I CTGAAG 2 cut(s) 806, 1119
Eco88I CYCGRG 2 cut(s) 320, 482
EcoNI CCTNNNNNAGG 1 cut(s) 507
EcoO109I RGGNCCY 5 cut(s) 11, 25, 512, 626, 927
EcoRI GAATTC 1 cut(s) 475
EcoRII CCWGG 1 cut(s) 229
EcoT14I CCWWGG 3 cut(s) 21, 174, 1567
EcoT22I ATGCAT 1 cut(s) 954
EcoT38I GRGCYC 4 cut(s) 29, 489, 516, 1396
ErhI CCWWGG 3 cut(s) 21, 174, 1567
FalI AAGNNNNNCTT 4 cut(s) 863, 895, 1314, 1346
FaqI GGGAC 4 cut(s) 566, 612, 639, 1061
FbaI TGATCA 1 cut(s) 802
FblI GTMKAC 1 cut(s) 303
FokI GGATG 7 cut(s) 3, 178, 201, 899, 1133, 1439, 1570
FriOI GRGCYC 4 cut(s) 29, 489, 516, 1396
FspBI CTAG 1 cut(s) 1520
GlaI GCGC 1 cut(s) 326
GsaI CCCAGC 4 cut(s) 85, 114, 207, 1393
GsuI CTGGAG 1 cut(s) 49
HaeII RGCGCY 1 cut(s) 328
HgaI GACGC 4 cut(s) 566, 1346, 1389, 1477
HhaI GCGC 1 cut(s) 327
Hin1I GRCGYC 1 cut(s) 1338
Hin6I GCGC 1 cut(s) 325
HinP1I GCGC 1 cut(s) 325
HinfI GANTC 5 cut(s) 86, 604, 847, 1297, 1438
HphI GGTGA 4 cut(s) 130, 782, 1159, 1328
Hpy166II GTNNAC 3 cut(s) 304, 500, 1400
Hpy188I TCNGA 6 cut(s) 268, 786, 807, 982, 1128, 1505
Hpy188III TCNNGA 7 cut(s) 389, 464, 731, 851, 944, 1520, 1555
Hpy8I GTNNAC 3 cut(s) 304, 500, 1400
Hpy99I CGWCG 2 cut(s) 494, 582
HpyAV CCTTC 6 cut(s) 265, 271, 503, 814, 1360, 1543
HpyCH4III ACNGT 3 cut(s) 971, 1165, 1274
HpyCH4V TGCA 6 cut(s) 506, 595, 907, 952, 967, 1018
HpyF10VI GCNNNNNNNGC 9 cut(s) 78, 101, 493, 583, 592, 762, 1103, 1109, 1411
HpyF3I CTNAG 1 cut(s) 519
Hsp92I GRCGYC 1 cut(s) 1338
HspAI GCGC 1 cut(s) 325
KflI GGGWCCC 1 cut(s) 626
Kpn2I TCCGGA 2 cut(s) 463, 943
Ksp22I TGATCA 1 cut(s) 802
Kzo9I GATC 9 cut(s) 160, 359, 446, 802, 1003, 1123, 1234, 1485, 1516
LguI GCTCTTC 1 cut(s) 378
LmnI GCTCC 2 cut(s) 256, 544
Lsp1109I GCAGC 6 cut(s) 262, 595, 874, 1115, 1118, 1121
LweI GCATC 2 cut(s) 564, 799
MaeI CTAG 1 cut(s) 1520
MaeIII GTNAC 3 cut(s) 971, 1165, 1316
MalI GATC 9 cut(s) 162, 361, 448, 804, 1005, 1125, 1236, 1487, 1518
MbiI CCGCTC 1 cut(s) 251
MboI GATC 9 cut(s) 160, 359, 446, 802, 1003, 1123, 1234, 1485, 1516
MflI RGATCY 2 cut(s) 1234, 1485
MhlI GDGCHC 4 cut(s) 29, 489, 516, 1396
MlsI TGGCCA 1 cut(s) 1138
MluCI AATT 3 cut(s) 475, 566, 1152
MluNI TGGCCA 1 cut(s) 1138
MlyI GAGTC 1 cut(s) 1291
MmeI TCCRAC 1 cut(s) 291
Mox20I TGGCCA 1 cut(s) 1138
Mph1103I ATGCAT 1 cut(s) 954
MroI TCCGGA 2 cut(s) 463, 943
MscI TGGCCA 1 cut(s) 1138
MseI TTAA 3 cut(s) 831, 1305, 1332
MslI CAYNNNNRTG 2 cut(s) 998, 1346
Msp20I TGGCCA 1 cut(s) 1138
MspA1I CMGCKG 1 cut(s) 534
MspCI CTTAAG 1 cut(s) 1331
MspR9I CCNGG 8 cut(s) 231, 243, 272, 299, 441, 459, 630, 1064
Mva1269I GAATGC 1 cut(s) 781
MvaI CCWGG 1 cut(s) 231
MvnI CGCG 1 cut(s) 1471
MwoI GCNNNNNNNGC 9 cut(s) 78, 101, 493, 583, 592, 762, 1103, 1109, 1411
NciI CCSGG 7 cut(s) 243, 272, 299, 441, 459, 630, 1064
NdeII GATC 9 cut(s) 160, 359, 446, 802, 1003, 1123, 1234, 1485, 1516
NlaIV GGNNCC 9 cut(s) 13, 27, 235, 247, 462, 514, 627, 628, 1487
NmeAIII GCCGAG 2 cut(s) 71, 1395
NmuCI GTSAC 1 cut(s) 1316
NsiI ATGCAT 1 cut(s) 954
NspI RCATGY 2 cut(s) 319, 997
NspV TTCGAA 1 cut(s) 1345
PaeR7I CTCGAG 1 cut(s) 320
PagI TCATGA 2 cut(s) 730, 850
PceI AGGCCT 1 cut(s) 1329
PciSI GCTCTTC 1 cut(s) 378
PctI GAATGC 1 cut(s) 781
PfeI GAWTC 4 cut(s) 86, 604, 847, 1438
PfoI TCCNGGA 2 cut(s) 241, 628
PleI GAGTC 1 cut(s) 1291
PpsI GAGTC 1 cut(s) 1291
PpuMI RGGWCCY 3 cut(s) 11, 626, 927
Psp5II RGGWCCY 3 cut(s) 11, 626, 927
Psp6I CCWGG 1 cut(s) 229
PspFI CCCAGC 4 cut(s) 81, 110, 203, 1389
PspGI CCWGG 1 cut(s) 229
PspN4I GGNNCC 9 cut(s) 13, 27, 235, 247, 462, 514, 627, 628, 1487
PspOMI GGGCCC 2 cut(s) 25, 512
PspPPI RGGWCCY 3 cut(s) 11, 626, 927
PspXI VCTCGAGB 1 cut(s) 320
PstI CTGCAG 1 cut(s) 508
PstNI CAGNNNCTG 1 cut(s) 1389
PsuI RGATCY 2 cut(s) 1234, 1485
RsaI GTAC 5 cut(s) 530, 701, 1225, 1271, 1401
RsaNI GTAC 5 cut(s) 529, 700, 1224, 1270, 1400
RseI CAYNNNNRTG 2 cut(s) 998, 1346
SapI GCTCTTC 1 cut(s) 378
SaqAI TTAA 3 cut(s) 831, 1305, 1332
Sau3AI GATC 9 cut(s) 160, 359, 446, 802, 1003, 1123, 1234, 1485, 1516
ScaI AGTACT 1 cut(s) 1225
SchI GAGTC 1 cut(s) 1291
ScrFI CCNGG 8 cut(s) 231, 243, 272, 299, 441, 459, 630, 1064
SduI GDGCHC 4 cut(s) 29, 489, 516, 1396
SfaNI GCATC 2 cut(s) 564, 799
SfcI CTRYAG 1 cut(s) 504
Sfr274I CTCGAG 1 cut(s) 320
SfuI TTCGAA 1 cut(s) 1345
SinI GGWCC 6 cut(s) 11, 437, 461, 500, 626, 927
SlaI CTCGAG 1 cut(s) 320
SmiMI CAYNNNNRTG 2 cut(s) 998, 1346
SmlI CTYRAG 2 cut(s) 320, 1331
SmoI CTYRAG 2 cut(s) 320, 1331
Sse9I AATT 3 cut(s) 475, 566, 1152
SseBI AGGCCT 1 cut(s) 1329
SspMI CTAG 1 cut(s) 1520
StuI AGGCCT 1 cut(s) 1329
StyD4I CCNGG 8 cut(s) 229, 241, 270, 297, 439, 457, 628, 1062
StyI CCWWGG 3 cut(s) 21, 174, 1567
TaaI ACNGT 3 cut(s) 971, 1165, 1274
TaqI TCGA 5 cut(s) 321, 358, 489, 1259, 1345
TasI AATT 3 cut(s) 475, 566, 1152
TatI WGTACW 4 cut(s) 528, 699, 1223, 1399
TauI GCSGC 6 cut(s) 59, 62, 72, 104, 107, 1191
TfiI GAWTC 4 cut(s) 86, 604, 847, 1438
Tru1I TTAA 3 cut(s) 831, 1305, 1332
Tru9I TTAA 3 cut(s) 831, 1305, 1332
TseFI GTSAC 1 cut(s) 1316
TseI GCWGC 6 cut(s) 275, 583, 862, 1103, 1106, 1109
Tsp45I GTSAC 1 cut(s) 1316
TspDTI ATGAA 6 cut(s) 415, 422, 839, 1145, 1446, 1451
Vha464I CTTAAG 1 cut(s) 1331
VpaK11BI GGWCC 6 cut(s) 11, 437, 461, 500, 626, 927
XagI CCTNNNNNAGG 1 cut(s) 507
XapI RAATTY 1 cut(s) 475
XbaI TCTAGA 1 cut(s) 1519
XceI RCATGY 2 cut(s) 319, 997
XhoI CTCGAG 1 cut(s) 320
XmiI GTMKAC 1 cut(s) 303
XspI CTAG 1 cut(s) 1520
ZrmI AGTACT 1 cut(s) 1225
Zsp2I ATGCAT 1 cut(s) 954
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.