Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0005450

Physical Location & Seq

Genomic Coordinates Forward (+)

22187527 .. 22192942

Gene Structure 5416 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g18240.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2568 bp

ATGAAAATGACGATACAGCCCTCGCAGCAGCACTCGGACAACGACCGGAGCAGCGGCGAGCTCCGCGCCCTGGACTGCAACCTCACCTCCCTTTGCGACCACATCCAGACCGACGGTTTCAACTCCGGCGCCTTCTCCGACGTCCTCGTCCTGGCCTTGGGCTCCACCTACCACCTCCACCGCCTCATCCTCTCCCGCAGCCCCTACTTCAGGAAGATGCTTCATGGACCTTGGAAAGAAGCCAATGCTCCGGTTGTGACATTGCACGTGGATGACAAGAATATCAATGCGGAGGCGATCACGACGGCTCTGGCTTACTTGTATGGCCACCACCCCAAGCTGAGCGACACCAATGCGTTTCGAGTACTAGCTGCTGCTTCTTTTCTTGATCTTCAGGATTTGTGTGCAATATGCACTGACTTTATTATATCGGAACTGTGGACTTCGAACTTCTTAGCATATCAGGTGTTTGCGGAGGGGCAAGATTATGGCATACATGGAGAACGAGTAAGAAATGCTTGCTGGGGGTACCTTTGTCAAAGCGGGGCCATGGAGTTGAAAGAGGTGCTTCCAAGACTTTCTTCTCAAACATTGCTTGCATTGCTCACCTCTGACGAGCTCTGGGTACCCAGTGAAGAGAAACGGTTTGAACTGGCTCTATGCACATTTCTTTCAAAGGGTGCTCAATGCAAACAGGAAGACTATGATCATGGAAGTTCCGGTTCAGAGACAGGGACGGATGCTCATTCTGATTCCTCTAAAGCAAAGGGAAAGAATCTGACTGATAGCTTCACTAGTAAAAGGTTGGAGTCTGAATTGGGGCGCTTAACTCTAAAAGATAATTTAGAGGGACATAATACAGCTCGTAAACTTCTGATAGAGCTTGCAGACTGTGTAGTTGACTTCCAAACAGGAAGTTCAAATGCCAAACAGCAAGTGCAACAAGTTTGTTACCCTCAGTCAAATTTCGAGCCAGGATACAACTGCAGCATGGGAGGTCCTTCATCATTTAATACATTTTCCGACATGGATGCAATGAGAACATCATGTTATGCGGAAGTGCCTATTGGTATTGGAGTAAGTAGATTGGGGGAAAATGGAGGAGCTATGGAGGGGCCATCTGATGAAGGGTCATGCTACCATTTGAATAACAATAATTGGCTTGGCAGGGACCAGTCAAGGCAATGCTCGTCAATGAACTCTTCAAGTAGTGAGCTAATGCCAAATGATTGGGGAAGATGTGGCATGCCTCCTCTTTCATGGGGTGGCAGGGTTGTAGGCAGAAGACAGCTTAAAGGTTACGGTAAACGTGACTTTGGGGTTGGTGGGGAGGAGTATGATGCATTTGTAAATATATTTGAAGGAGGTTCTCTTCTATACTGCAACATGTCTTTTGAGGCACTATTGAATGTAAGAAAGCAACTTGAGGAAATGGGTTTCCCTTGCAAAGCTGTGAATGATAGTCTTTGGCTGCAGATGCTATTGAGCCAGAGAGTTCAAGAAATTGGCGCTGATACACGCAAAAGTTGCTGTCTTACAAGCGTAGCATGCAGTTGCAGACAGCAATTTTCTTTCCCACATGGAGGTACCACCGGGTACTATATGCAAGAGCATAATCAGAGTAACTCTTCCGGTGTATATGTCGCCGAGTCTGCTTCAGGTGAAGGAAATGGCCTCTTCAGGCCTGTACGTGTGCATGTCAGGGGTCCTATTGATGGCCTTGCAGGTATTGGACGTGGAACCACATTTGTCCCAACAGCCACTTGGCCTCCAACTCGATTCGTCTTTTCTCGTGTGCCATTTGGCATAGGCAACAGAAACGGCCAGCAGTCTCTTGCCAATGATGACTCAGAGGCTAGAGCTGATCACAATGCAGAGCTGTCAGGAGATGGATTGACAGCTTTGGTTGGGCTAAGCCAAGGAGGTAACAGTGCAGGTAATGCTCATGTAGAGCAAACAGAGACAGGCTATGAGATGGATATGCAAAGCCGAATGCCTGGAACCTCCATGTCAGTGCCAAGTTCTAGTGGTCCACCTGTGCAGATGGTAGAGCCATCAGACCAAGCACTTGGAATTGAGTGGGATAATGCAAACAGTTCCTCCATTTCATTGGATATGAAAACACCCTTAAGTCACTTCCCTCCGTTCCGCTTTGGGGTGCAATTTGAGGATGTACACAGACTCAGTGATGGCCAAGTCAAGCACTCATCAGAAGTCTTTTATGCTGGTTCTCTATGGAAGATTAGTGTTCAGGCTTTTAATGACGAGGACCCTCAAGGACGCCGAACACTTGGATTATTTATCCACCGACGTAAAGCTGAGATTACTGATCCGTATAGAAAGGTGCAGATGTATGTCGATTCTCGTGAAAAGGTTACTGCCCGCTACCAGCTAATATGTCCATCAAAGAGGGAAGTCATGGTGTTTGGAAGCTTCAAGCAAACAGGCACACTTTTACCAAAGGCTCCAAAGGGCTGGGGCTGGCGAACAGCTCTGTTATTTGATGAGCTCGCCGATCTTCTCCAAAATGGGGCCTTAAGAGTGGCTGCAGTGGTGCAGCTTTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000151 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0006355 GO:0007276 GO:0007283 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0012505 GO:0016363 GO:0019219 GO:0019222 GO:0019953 GO:0022414 GO:0031323 GO:0031326 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032501 GO:0032504 GO:0032991 GO:0034399 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044703 GO:0048232 GO:0048609 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051704 GO:0060255 GO:0065007 GO:0070013 GO:0080090 GO:1902494 GO:1903506 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB

Protein Analysis

856

Amino Acids

94.01

Weight (kDa)

5.7

Isoelectric Point (pI)

47.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BTB	PF00651	40 - 144	1.1e-14	BTB/POZ domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005450)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G15840 AT4G15840
fragaria_vesca	FvH4_4g18240 FvH4_4g18240 FvH4_4g18240 FvH4_4g18240 FvH4_4g18240 FvH4_4g18240 FvH4_4g18240
malus_domestica	MD08G1066800.v1.1 MD13G1167900.v1.1
prunus_persica	Prupe.1G135400_v2.0.a1 Prupe.1G135400_v2.0.a1 Prupe.1G135400_v2.0.a1 Prupe.1G135400_v2.0.a1
pyrus_communis	pycom13g14360
rosa_chinensis	RchiOBHm_Chr4g0422381
rosa_laevigata	RLG00000007614
rosa_multiflora	Rmu_sc0013245.1_g000001 Rmu_sc0034689.1_g000001
rosa_roxburghii	Rroxscaffold_5G00364500
rosa_rugosa	Rorug04G0179600 Rorug04G0179700
rosa_samantha	Rh4AG239100 Rh4AG239500 Rh4BG242700 Rh4CG254100 Rh4DG238200
rosa_wichuraiana	Rw4G020670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	146
AatII	GACGTC	1 cut(s)	144
Acc36I	ACCTGC	2 cut(s)	1715, 1925
Acc65I	GGTACC	3 cut(s)	528, 625, 1586
AccB1I	GGYRCC	4 cut(s)	128, 528, 625, 1586
AccII	CGCG	1 cut(s)	66
AclWI	GGATC	1 cut(s)	2324
AcoI	YGGCCR	3 cut(s)	325, 1822, 2191
AcsI	RAATTY	1 cut(s)	964
AcuI	CTGAAG	4 cut(s)	193, 377, 1641, 1663
AcvI	CACGTG	1 cut(s)	268
AcyI	GRCGYC	3 cut(s)	129, 141, 2281
AfaI	GTAC	7 cut(s)	366, 530, 627, 1588, 1598, 1689, 2175
AfiI	CCNNNNNNNGG	8 cut(s)	70, 151, 157, 210, 1583, 1715, 2155, 2530
AflII	CTTAAG	2 cut(s)	2128, 2536
AflIII	ACRYGT	2 cut(s)	1386, 1690
AhlI	ACTAGT	1 cut(s)	794
AjiI	CACGTC	1 cut(s)	1736
AjnI	CCWGG	4 cut(s)	69, 150, 973, 1996
AjuI	GAANNNNNNNTTGG	4 cut(s)	565, 597, 1050, 1082
Alw21I	GWGCWC	4 cut(s)	63, 621, 685, 2511
Alw26I	GTCTC	3 cut(s)	722, 1836, 1955
AlwI	GGATC	1 cut(s)	2324
ApoI	RAATTY	1 cut(s)	964
Asp718I	GGTACC	3 cut(s)	528, 625, 1586
AspLEI	GCGC	4 cut(s)	68, 131, 825, 1511
AspS9I	GGNCC	9 cut(s)	227, 546, 998, 1115, 1171, 1706, 2030, 2269, 2532
AsuC2I	CCSGG	1 cut(s)	1594
AsuHPI	GGTGA	3 cut(s)	76, 598, 1673
AsuII	TTCGAA	1 cut(s)	446
AvaII	GGWCC	6 cut(s)	227, 998, 1171, 1706, 2030, 2269
BaeI	ACNNNNGTAYC	2 cut(s)	520, 553
BalI	TGGCCA	2 cut(s)	327, 2193
BanI	GGYRCC	4 cut(s)	128, 528, 625, 1586
BanII	GRGCYC	4 cut(s)	63, 164, 621, 2511
BauI	CACGAG	2 cut(s)	1791, 2364
BbrPI	CACGTG	1 cut(s)	268
BbsI	GAAGAC	2 cut(s)	705, 1291
Bbv12I	GWGCWC	4 cut(s)	63, 621, 685, 2511
BbvI	GCAGC	9 cut(s)	37, 40, 63, 210, 358, 361, 999, 1458, 2533
BccI	CCATC	8 cut(s)	1126, 1709, 1883, 1969, 2038, 2062, 2183, 2410
BceAI	ACGGC	2 cut(s)	321, 1837
BcgI	CGANNNNNNTGC	4 cut(s)	335, 369, 1013, 1047
BciT130I	CCWGG	4 cut(s)	71, 152, 975, 1998
BciVI	GTATCC	1 cut(s)	971
BclI	TGATCA	2 cut(s)	706, 1864
BcnI	CCSGG	1 cut(s)	1594
BcoDI	GTCTC	3 cut(s)	722, 1836, 1955
BcuI	ACTAGT	1 cut(s)	794
BfaI	CTAG	4 cut(s)	368, 795, 1857, 2025
BfmI	CTRYAG	3 cut(s)	985, 1472, 2547
BfoI	RGCGCY	3 cut(s)	132, 826, 1512
BfrI	CTTAAG	2 cut(s)	2128, 2536
BfuAI	ACCTGC	2 cut(s)	1715, 1925
BfuI	GTATCC	1 cut(s)	971
BlpI	GCTNAGC	2 cut(s)	341, 1913
BmcAI	AGTACT	1 cut(s)	366
Bme1390I	CCNGG	5 cut(s)	71, 152, 975, 1594, 1998
Bme18I	GGWCC	6 cut(s)	227, 998, 1171, 1706, 2030, 2269
BmgBI	CACGTC	1 cut(s)	1736
BmgT120I	GGNCC	9 cut(s)	227, 546, 998, 1115, 1171, 1706, 2030, 2269, 2532
BmrFI	CCNGG	5 cut(s)	71, 152, 975, 1594, 1998
BmrI	ACTGGG	1 cut(s)	624
BmsI	GCATC	5 cut(s)	207, 730, 1021, 1330, 1467
BmuI	ACTGGG	1 cut(s)	624
BpiI	GAAGAC	2 cut(s)	705, 1291
Bpu1102I	GCTNAGC	2 cut(s)	341, 1913
Bpu14I	TTCGAA	1 cut(s)	446
BpuEI	CTTGAG	2 cut(s)	1445, 2259
BpuMI	CCSGG	1 cut(s)	1594
BsaAI	YACGTR	2 cut(s)	268, 1691
BsaHI	GRCGYC	3 cut(s)	129, 141, 2281
BsaJI	CCNNGG	5 cut(s)	69, 156, 230, 549, 1918
BsaWI	WCCGGW	4 cut(s)	45, 250, 719, 1631
BsaXI	ACNNNNNCTCC	8 cut(s)	71, 101, 492, 522, 1753, 1783, 2084, 2114
Bsc4I	CCNNNNNNNGG	8 cut(s)	70, 151, 157, 210, 1583, 1715, 2155, 2530
Bse1I	ACTGG	3 cut(s)	630, 657, 1174
Bse3DI	GCAATG	5 cut(s)	260, 590, 599, 1041, 1190
BseBI	CCWGG	4 cut(s)	71, 152, 975, 1998
BseDI	CCNNGG	5 cut(s)	69, 156, 230, 549, 1918
BseGI	GGATG	6 cut(s)	102, 186, 277, 745, 1036, 2176
BseLI	CCNNNNNNNGG	8 cut(s)	70, 151, 157, 210, 1583, 1715, 2155, 2530
BseMI	GCAATG	5 cut(s)	260, 590, 599, 1041, 1190
BseMII	CTCAG	5 cut(s)	332, 971, 1863, 2197, 2310
BseNI	ACTGG	3 cut(s)	630, 657, 1174
BseRI	GAGGAG	3 cut(s)	1116, 1242, 1346
BseXI	GCAGC	9 cut(s)	37, 40, 63, 210, 358, 361, 999, 1458, 2533
BseYI	CCCAGC	2 cut(s)	522, 2475
BsgI	GTGCAG	3 cut(s)	1953, 2060, 2366
Bsh1236I	CGCG	1 cut(s)	66
Bsh1285I	CGRYCG	1 cut(s)	46
BshNI	GGYRCC	4 cut(s)	128, 528, 625, 1586
BsiEI	CGRYCG	1 cut(s)	46
BsiHKAI	GWGCWC	4 cut(s)	63, 621, 685, 2511
BsiSI	CCGG	6 cut(s)	46, 126, 251, 720, 1593, 1632
BslFI	GGGAC	4 cut(s)	748, 864, 1184, 1736
BslI	CCNNNNNNNGG	8 cut(s)	70, 151, 157, 210, 1583, 1715, 2155, 2530
BsmAI	GTCTC	3 cut(s)	722, 1836, 1955
BsmFI	GGGAC	4 cut(s)	748, 864, 1184, 1736
BsmI	GAATGC	1 cut(s)	1998
Bsp119I	TTCGAA	1 cut(s)	446
Bsp1286I	GDGCHC	5 cut(s)	63, 164, 621, 685, 2511
Bsp1407I	TGTACA	1 cut(s)	2173
Bsp143I	GATC	6 cut(s)	297, 388, 706, 1864, 2329, 2515
Bsp1720I	GCTNAGC	2 cut(s)	341, 1913
Bsp19I	CCATGG	1 cut(s)	549
BspCNI	CTCAG	5 cut(s)	333, 970, 1862, 2196, 2311
BspFNI	CGCG	1 cut(s)	66
BspMAI	CTGCAG	3 cut(s)	989, 1476, 2551
BspMI	ACCTGC	2 cut(s)	1715, 1925
BspPI	GGATC	1 cut(s)	2324
BspT104I	TTCGAA	1 cut(s)	446
BspT107I	GGYRCC	4 cut(s)	128, 528, 625, 1586
BspTI	CTTAAG	2 cut(s)	2128, 2536
BsrDI	GCAATG	5 cut(s)	260, 590, 599, 1041, 1190
BsrGI	TGTACA	1 cut(s)	2173
BsrI	ACTGG	3 cut(s)	630, 657, 1174
BssECI	CCNNGG	5 cut(s)	69, 156, 230, 549, 1918
BssMI	GATC	6 cut(s)	297, 388, 706, 1864, 2329, 2515
BssNI	GRCGYC	3 cut(s)	129, 141, 2281
BssSI	CACGAG	2 cut(s)	1791, 2364
BssT1I	CCWWGG	4 cut(s)	156, 230, 549, 1918
Bst2BI	CACGAG	2 cut(s)	1791, 2364
Bst2UI	CCWGG	4 cut(s)	71, 152, 975, 1998
Bst4CI	ACNGT	7 cut(s)	116, 438, 645, 893, 1304, 1931, 2096
Bst6I	CTCTTC	5 cut(s)	630, 1207, 1377, 1633, 1682
BstACI	GRCGYC	3 cut(s)	129, 141, 2281
BstAFI	CTTAAG	2 cut(s)	2128, 2536
BstAPI	GCANNNNNTGC	2 cut(s)	1527, 1940
BstAUI	TGTACA	1 cut(s)	2173
BstBAI	YACGTR	2 cut(s)	268, 1691
BstBI	TTCGAA	1 cut(s)	446
BstDEI	CTNAG	7 cut(s)	341, 454, 957, 1849, 1913, 2183, 2319
BstDSI	CCRYGG	1 cut(s)	549
BstENI	CCTNNNNNAGG	1 cut(s)	208
BstF5I	GGATG	6 cut(s)	102, 186, 277, 745, 1036, 2176
BstFNI	CGCG	1 cut(s)	66
BstH2I	RGCGCY	3 cut(s)	132, 826, 1512
BstHHI	GCGC	4 cut(s)	68, 131, 825, 1511
BstKTI	GATC	6 cut(s)	300, 391, 709, 1867, 2332, 2518
BstMAI	GTCTC	3 cut(s)	722, 1836, 1955
BstMBI	GATC	6 cut(s)	297, 388, 706, 1864, 2329, 2515
BstMCI	CGRYCG	1 cut(s)	46
BstMWI	GCNNNNNNNGC	8 cut(s)	25, 63, 601, 1477, 1527, 1548, 1652, 1940
BstNI	CCWGG	4 cut(s)	71, 152, 975, 1998
BstNSI	RCATGY	4 cut(s)	1249, 1390, 1551, 1700
BstSCI	CCNGG	5 cut(s)	69, 150, 973, 1592, 1996
BstSFI	CTRYAG	3 cut(s)	985, 1472, 2547
BstUI	CGCG	1 cut(s)	66
BstV1I	GCAGC	9 cut(s)	37, 40, 63, 210, 358, 361, 999, 1458, 2533
BstV2I	GAAGAC	2 cut(s)	705, 1291
BstXI	CCANNNNNNTGG	4 cut(s)	1230, 2069, 2110, 2475
BsuI	GTATCC	1 cut(s)	971
BtgI	CCRYGG	1 cut(s)	549
BtrI	CACGTC	1 cut(s)	1736
BtsCI	GGATG	6 cut(s)	102, 186, 277, 745, 1036, 2176
BtsI	GCAGTG	1 cut(s)	2556
BtsIMutI	CAGTG	6 cut(s)	414, 637, 1936, 2019, 2191, 2556
BveI	ACCTGC	2 cut(s)	1715, 1925
CfoI	GCGC	4 cut(s)	68, 131, 825, 1511
Cfr13I	GGNCC	9 cut(s)	227, 546, 998, 1115, 1171, 1706, 2030, 2269, 2532
CseI	GACGC	1 cut(s)	2289
Csp6I	GTAC	7 cut(s)	365, 529, 626, 1587, 1597, 1688, 2174
CviQI	GTAC	7 cut(s)	365, 529, 626, 1587, 1597, 1688, 2174
DdeI	CTNAG	7 cut(s)	341, 454, 957, 1849, 1913, 2183, 2319
DinI	GGCGCC	1 cut(s)	130
DpnI	GATC	6 cut(s)	299, 390, 708, 1866, 2331, 2517
DpnII	GATC	6 cut(s)	297, 388, 706, 1864, 2329, 2515
DrdI	GACNNNNNNGTC	1 cut(s)	146
DseDI	GACNNNNNNGTC	1 cut(s)	146
EaeI	YGGCCR	3 cut(s)	325, 1822, 2191
Eam1104I	CTCTTC	5 cut(s)	630, 1207, 1377, 1633, 1682
EarI	CTCTTC	5 cut(s)	630, 1207, 1377, 1633, 1682
Ecl136II	GAGCTC	3 cut(s)	61, 619, 2509
Eco130I	CCWWGG	4 cut(s)	156, 230, 549, 1918
Eco147I	AGGCCT	1 cut(s)	1684
Eco24I	GRGCYC	4 cut(s)	63, 164, 621, 2511
Eco47I	GGWCC	6 cut(s)	227, 998, 1171, 1706, 2030, 2269
Eco53kI	GAGCTC	3 cut(s)	61, 619, 2509
Eco57I	CTGAAG	4 cut(s)	193, 377, 1641, 1663
Eco72I	CACGTG	1 cut(s)	268
EcoICRI	GAGCTC	3 cut(s)	61, 619, 2509
EcoNI	CCTNNNNNAGG	1 cut(s)	208
EcoO109I	RGGNCCY	4 cut(s)	998, 1706, 2269, 2532
EcoRII	CCWGG	4 cut(s)	69, 150, 973, 1996
EcoT14I	CCWWGG	4 cut(s)	156, 230, 549, 1918
EcoT22I	ATGCAT	1 cut(s)	1345
EcoT38I	GRGCYC	4 cut(s)	63, 164, 621, 2511
EgeI	GGCGCC	1 cut(s)	130
EheI	GGCGCC	1 cut(s)	130
ErhI	CCWWGG	4 cut(s)	156, 230, 549, 1918
FalI	AAGNNNNNCTT	6 cut(s)	502, 534, 552, 584, 565, 597
FaqI	GGGAC	4 cut(s)	748, 864, 1184, 1736
FauI	CCCGC	3 cut(s)	203, 536, 2390
FbaI	TGATCA	2 cut(s)	706, 1864
FokI	GGATG	6 cut(s)	89, 173, 284, 752, 1043, 2183
FriOI	GRGCYC	4 cut(s)	63, 164, 621, 2511
FspBI	CTAG	4 cut(s)	368, 795, 1857, 2025
GlaI	GCGC	4 cut(s)	67, 130, 824, 1510
GsaI	CCCAGC	2 cut(s)	526, 2479
HaeII	RGCGCY	3 cut(s)	132, 826, 1512
HapII	CCGG	6 cut(s)	46, 126, 251, 720, 1593, 1632
HgaI	GACGC	1 cut(s)	2289
HhaI	GCGC	4 cut(s)	68, 131, 825, 1511
Hin1I	GRCGYC	3 cut(s)	129, 141, 2281
Hin6I	GCGC	4 cut(s)	66, 129, 823, 1509
HinP1I	GCGC	4 cut(s)	66, 129, 823, 1509
HincII	GTYRAC	1 cut(s)	901
HindII	GTYRAC	1 cut(s)	901
HindIII	AAGCTT	1 cut(s)	2431
HinfI	GANTC	8 cut(s)	752, 775, 809, 1649, 1779, 1847, 2181, 2360
HpaII	CCGG	6 cut(s)	46, 126, 251, 720, 1593, 1632
HphI	GGTGA	3 cut(s)	76, 598, 1673
Hpy166II	GTNNAC	6 cut(s)	441, 869, 901, 1307, 2033, 2176
Hpy188III	TCNNGA	8 cut(s)	106, 211, 301, 386, 395, 1499, 1884, 2366
Hpy8I	GTNNAC	6 cut(s)	441, 869, 901, 1307, 2033, 2176
Hpy99I	CGWCG	4 cut(s)	116, 143, 307, 2313
HpyAV	CCTTC	5 cut(s)	142, 1011, 1121, 1355, 1658
HpyCH4III	ACNGT	7 cut(s)	116, 438, 645, 893, 1304, 1931, 2096
HpyCH4IV	ACGT	6 cut(s)	141, 267, 1309, 1690, 1735, 2311
HpyF10VI	GCNNNNNNNGC	8 cut(s)	25, 63, 601, 1477, 1527, 1548, 1652, 1940
HpyF3I	CTNAG	7 cut(s)	341, 454, 957, 1849, 1913, 2183, 2319
HpySE526I	ACGT	6 cut(s)	141, 267, 1309, 1690, 1735, 2311
Hsp92I	GRCGYC	3 cut(s)	129, 141, 2281
HspAI	GCGC	4 cut(s)	66, 129, 823, 1509
KasI	GGCGCC	1 cut(s)	128
KpnI	GGTACC	3 cut(s)	532, 629, 1590
Ksp22I	TGATCA	2 cut(s)	706, 1864
Kzo9I	GATC	6 cut(s)	297, 388, 706, 1864, 2329, 2515
LmnI	GCTCC	6 cut(s)	48, 66, 167, 253, 1103, 2470
Lsp1109I	GCAGC	9 cut(s)	37, 40, 63, 210, 358, 361, 999, 1458, 2533
LweI	GCATC	5 cut(s)	207, 730, 1021, 1330, 1467
MaeI	CTAG	4 cut(s)	368, 795, 1857, 2025
MaeII	ACGT	6 cut(s)	141, 267, 1309, 1690, 1735, 2311
MaeIII	GTNAC	8 cut(s)	256, 950, 1298, 1310, 1622, 1925, 2132, 2374
MalI	GATC	6 cut(s)	299, 390, 708, 1866, 2331, 2517
MboI	GATC	6 cut(s)	297, 388, 706, 1864, 2329, 2515
MhlI	GDGCHC	5 cut(s)	63, 164, 621, 685, 2511
MlsI	TGGCCA	2 cut(s)	327, 2193
MluCI	AATT	8 cut(s)	815, 841, 964, 1156, 1503, 1565, 2073, 2162
MluNI	TGGCCA	2 cut(s)	327, 2193
Mly113I	GGCGCC	1 cut(s)	129
MlyI	GAGTC	4 cut(s)	818, 1658, 1841, 2175
MmeI	TCCRAC	4 cut(s)	162, 786, 1047, 1796
Mox20I	TGGCCA	2 cut(s)	327, 2193
Mph1103I	ATGCAT	1 cut(s)	1345
MscI	TGGCCA	2 cut(s)	327, 2193
MseI	TTAA	6 cut(s)	827, 1011, 1293, 2129, 2259, 2537
MslI	CAYNNNNRTG	2 cut(s)	270, 2012
Msp20I	TGGCCA	2 cut(s)	327, 2193
MspA1I	CMGCKG	1 cut(s)	54
MspCI	CTTAAG	2 cut(s)	2128, 2536
MspI	CCGG	6 cut(s)	46, 126, 251, 720, 1593, 1632
MspR9I	CCNGG	5 cut(s)	71, 152, 975, 1594, 1998
Mva1269I	GAATGC	1 cut(s)	1998
MvaI	CCWGG	4 cut(s)	71, 152, 975, 1998
MvnI	CGCG	1 cut(s)	66
MwoI	GCNNNNNNNGC	8 cut(s)	25, 63, 601, 1477, 1527, 1548, 1652, 1940
NarI	GGCGCC	1 cut(s)	129
NciI	CCSGG	1 cut(s)	1594
NcoI	CCATGG	1 cut(s)	549
NdeII	GATC	6 cut(s)	297, 388, 706, 1864, 2329, 2515
NmeAIII	GCCGAG	1 cut(s)	1672
NmuCI	GTSAC	3 cut(s)	256, 1310, 2132
NsiI	ATGCAT	1 cut(s)	1345
NspI	RCATGY	4 cut(s)	1249, 1390, 1551, 1700
NspV	TTCGAA	1 cut(s)	446
PaeI	GCATGC	2 cut(s)	1249, 1551
PceI	AGGCCT	1 cut(s)	1684
PciI	ACATGT	1 cut(s)	1386
PctI	GAATGC	1 cut(s)	1998
PfeI	GAWTC	4 cut(s)	752, 775, 1779, 2360
PleI	GAGTC	4 cut(s)	817, 1657, 1841, 2175
PluTI	GGCGCC	1 cut(s)	132
PmaCI	CACGTG	1 cut(s)	268
PmlI	CACGTG	1 cut(s)	268
PpsI	GAGTC	4 cut(s)	817, 1657, 1841, 2175
Ppu21I	YACGTR	2 cut(s)	268, 1691
PpuMI	RGGWCCY	3 cut(s)	998, 1706, 2269
PscI	ACATGT	1 cut(s)	1386
Psp124BI	GAGCTC	3 cut(s)	63, 621, 2511
Psp5II	RGGWCCY	3 cut(s)	998, 1706, 2269
Psp6I	CCWGG	4 cut(s)	69, 150, 973, 1996
PspCI	CACGTG	1 cut(s)	268
PspFI	CCCAGC	2 cut(s)	522, 2475
PspGI	CCWGG	4 cut(s)	69, 150, 973, 1996
PspPI	GGNCC	9 cut(s)	227, 546, 998, 1115, 1171, 1706, 2030, 2269, 2532
PspPPI	RGGWCCY	3 cut(s)	998, 1706, 2269
PstI	CTGCAG	3 cut(s)	989, 1476, 2551
RsaI	GTAC	7 cut(s)	366, 530, 627, 1588, 1598, 1689, 2175
RsaNI	GTAC	7 cut(s)	365, 529, 626, 1587, 1597, 1688, 2174
RseI	CAYNNNNRTG	2 cut(s)	270, 2012
SacI	GAGCTC	3 cut(s)	63, 621, 2511
SaqAI	TTAA	6 cut(s)	827, 1011, 1293, 2129, 2259, 2537
Sau3AI	GATC	6 cut(s)	297, 388, 706, 1864, 2329, 2515
Sau96I	GGNCC	9 cut(s)	227, 546, 998, 1115, 1171, 1706, 2030, 2269, 2532
ScaI	AGTACT	1 cut(s)	366
SchI	GAGTC	4 cut(s)	818, 1658, 1841, 2175
ScrFI	CCNGG	5 cut(s)	71, 152, 975, 1594, 1998
SduI	GDGCHC	5 cut(s)	63, 164, 621, 685, 2511
SfaNI	GCATC	5 cut(s)	207, 730, 1021, 1330, 1467
SfcI	CTRYAG	3 cut(s)	985, 1472, 2547
SfoI	GGCGCC	1 cut(s)	130
SfuI	TTCGAA	1 cut(s)	446
SinI	GGWCC	6 cut(s)	227, 998, 1171, 1706, 2030, 2269
SmiMI	CAYNNNNRTG	2 cut(s)	270, 2012
SmlI	CTYRAG	4 cut(s)	1424, 2128, 2274, 2536
SmoI	CTYRAG	4 cut(s)	1424, 2128, 2274, 2536
SpeI	ACTAGT	1 cut(s)	794
SphI	GCATGC	2 cut(s)	1249, 1551
Sse9I	AATT	8 cut(s)	815, 841, 964, 1156, 1503, 1565, 2073, 2162
SseBI	AGGCCT	1 cut(s)	1684
SspDI	GGCGCC	1 cut(s)	128
SspMI	CTAG	4 cut(s)	368, 795, 1857, 2025
SstI	GAGCTC	3 cut(s)	63, 621, 2511
StuI	AGGCCT	1 cut(s)	1684
StyD4I	CCNGG	5 cut(s)	69, 150, 973, 1592, 1996
StyI	CCWWGG	4 cut(s)	156, 230, 549, 1918
TaaI	ACNGT	7 cut(s)	116, 438, 645, 893, 1304, 1931, 2096
TaiI	ACGT	6 cut(s)	144, 270, 1312, 1693, 1738, 2314
TaqI	TCGA	5 cut(s)	361, 446, 969, 1777, 2358
TaqII	GACCGA	1 cut(s)	125
TasI	AATT	8 cut(s)	815, 841, 964, 1156, 1503, 1565, 2073, 2162
TatI	WGTACW	2 cut(s)	364, 2173
TauI	GCSGC	1 cut(s)	57
TfiI	GAWTC	4 cut(s)	752, 775, 1779, 2360
Tru1I	TTAA	6 cut(s)	827, 1011, 1293, 2129, 2259, 2537
Tru9I	TTAA	6 cut(s)	827, 1011, 1293, 2129, 2259, 2537
TscAI	CASTG	6 cut(s)	421, 637, 1936, 2019, 2191, 2556
TseFI	GTSAC	3 cut(s)	256, 1310, 2132
Tsp45I	GTSAC	3 cut(s)	256, 1310, 2132
TspDTI	ATGAA	8 cut(s)	17, 212, 993, 1140, 1211, 1248, 2097, 2132
TspGWI	ACGGA	3 cut(s)	752, 2133, 2322
TspRI	CASTG	6 cut(s)	421, 637, 1936, 2019, 2191, 2556
Vha464I	CTTAAG	2 cut(s)	2128, 2536
VpaK11BI	GGWCC	6 cut(s)	227, 998, 1171, 1706, 2030, 2269
XagI	CCTNNNNNAGG	1 cut(s)	208
XapI	RAATTY	1 cut(s)	964
XceI	RCATGY	4 cut(s)	1249, 1390, 1551, 1700
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1761
XspI	CTAG	4 cut(s)	368, 795, 1857, 2025
ZraI	GACGTC	1 cut(s)	142
ZrmI	AGTACT	1 cut(s)	366
Zsp2I	ATGCAT	1 cut(s)	1345

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.