Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0005450

Physical Location & Seq

Genomic Coordinates Forward (+)

44678490 .. 44683246

Gene Structure 4757 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G020670.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2589 bp

ATGGAAGCTAACTACGCTAACAACCACCACCACAACCAAGCGACGCGGTGCTTCGGGCCGCAGATGAAAATGACGATTCAGCCCTCGCACAGCAGCAGCAGCACTCCGACAACGACCGCAGCAGCGGCGAGCTCCACCGAAGGCTTCAACTCCGGCGCCTTCTCCGACGTCCTCGTCCTCGCCATGGGCTCCACCTACCACCTCCACCGCCTCATCCTCTCCCGCAGCCCCTACTTCAGGAATATGCTTCATGGACCTTGGAAAGAAGCCAACGCTCCCATTGTGACATTACATGTAGATGATAAGAATATTAATGCAGAGGCAATTGCGACGGCCTTGGCGTACTTGTATGGCCACCACCCCAAGCTTAGTGATACCAATGCCTTTCGCGTTCTTGCTGCTGCTTCTTTTCTTGATCTTCAGGATTTATGTGCTATATGCACTGACTTCATTATATCGGAACTGTGGACTTCAAACTTCTTAGCCTATCAGGTGTTTGCGGAGGGGCAAGATTATGGCATACATGGAGAACGGGTAAGAAATGCTTGCTGGGGCTACCTTTGTCAAAGCGGTGCCATGGAGTTGAAAGAGGTGCTTCCGAGACTTTCTTCTCAAACGTTGCTTGCATTACTCACCTCTGACGAGCTCTGGGTACCCAGTGAAGAGAAACGGTTTGAGCTGGCATTGTGCACATTCCTTTCAAAGGGTGCTCAATGCAAACAGGAAGATTATGATCATGGAAGTTCCAGTTCGGAGACAGGGACGGATGCACATTCCGATTCCTCTAAATCAAATGGAAAGAATCTGACTGATAGCTTCGCTAATAAAAGGTTGGAGTCTGAATTGGGGCGCTTAACTCTAAAAGATGATTTAGAGGGACATAATACAGCTCGTAACCTTCTGATAGAGCTTGCAGACTGTGTAGTTGACTTCCAAACAGGAGGTTCAAATGCCAAACAGCAAGTGCAACAAGTTGCTTACCCTCAGTCAAATTTTGAGCCAGGATACAACTGCAGCATGGGAGGTCCTTCATCATTTAATACATTTTCAGACATAGATGCAATTAGAACTTCATGTTATGCGGAAATGCCTATTGGTGTTGGAGTAAGTAGATTGGGGGAAAATGGAGGGGCTATGGAGGGGCCATCTGATGAAGGGTCATGCTACCATTTAAATAACAATAGTTGGCTTGGTAGGGACCAGTCAAGGCAATGCTCGTCAATGAACTCTTCAAGTAGTGAGCTAATGCCAAATGATTGGGGAAGATGTAGCATGCCTCCTCTTTCCTGGGGTGGCAGGGTTGTAGGCAGAAGACAGCTTAAAGGTTATGGTAAAGGAGAACTTGGGGTTGGTGGGGAGGAATATGATGCATTTGTAAATATATTTGAAGGAGGATCTCTTCTATACTGCAACATGTCTTTTGAGGCACTTTTGAATGTAAGAAAGCAACTTGAGGAAATGGGGTTTCCTTGCAAAGCTGTAAATGATGGTCTTTGGCTGCAGATGCTTTTGAGCCAGAGAGTTCAAGAAATTGGCGCTGATACATGCAAAAGTTGCTGTCTAACAAGCATAGCATGCAGTTGCAGACAGCAATTTTCGTTCTCACATGGAGGTACCACCGGATACTACATGCAAGAGCATAATCAGAGTAACTCTTCTGGAGTATACATCACTGAGTCTGCTCCAGGTGAAGGAAATGGCCTCTTCAGGCCTGTACGTGTGCATGTCAGGGGTCCTATTGATGGGCTTGCTGGTATTGGACGTGGAACCACATTTGTCCCAGCAGCCGCTTGGCCTCCAACTCGGTTCGTCTTTTCTCGTGTGCCATTTGGTATGGGCAACAGAAATTGCCAGCAGTCTCTTGCTAATGATGATTCAGAGGCTAGAGCTGACCACACTGCAGAGCTGTCAGGAGATGGATTGACAGCTTTGGTTGGGCTAAGCCAAGGAGGTAACAATGCAGCTCATGTAGAGCAAACAGAGAGGGGCTATGAGATGGATATGCAAAGCCGAATGCCTGGAACTTCCATGTCAGTGCCAAGTTCTAGTGGTGCACCCGTGCAGATGGTAGAGTCATCAGACCAAGCACTTGGGATTGAGTGGGATAATGCAAACAGTTCTTCCATATCATTGGATATGAAAACACCTTTAAATCACTTCCCTCCATTCCGCTTTGGGGTGCAATTTGAGGATGTACACAGACTCAGTGATGGCCAAGTCAAGCACTCTTCAGAAGTCTTTTATGCTGGTTCTTTATGGAAGGTTAGTGTTCAGGCTTTTAATGATGAGGACCCTCAAGGACGCCGAACACTCGGATTATTTCTCCACCGACGTAAAGCTGAGATTACCGACCCGTATAGAAAGGTGCAGATGTATGTCGATTCTCGTGAAAAGGTTACTGCCCGCTACCAGCTAATATGTCCATCAAAAAGGGAAGTCATGGTGTTTGGAAGCTACAAGCAAACAGGCACCCTTTTACCAAAAGCTCCGAAGGGCTGGGGCTGGCGAACAGCTCTGTTATTTGATGAACTTGCAGATCTTCTTCAAAATGGGGCCTTAAGAGTGGCTGCAGTGGTGCAGCTTGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000151 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0006355 GO:0007276 GO:0007283 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0012505 GO:0016363 GO:0019219 GO:0019222 GO:0019953 GO:0022414 GO:0031323 GO:0031326 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032501 GO:0032504 GO:0032991 GO:0034399 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044703 GO:0048232 GO:0048609 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051704 GO:0060255 GO:0065007 GO:0070013 GO:0080090 GO:1902494 GO:1903506 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB

Protein Analysis

862

Amino Acids

94.41

Weight (kDa)

5.67

Isoelectric Point (pI)

47.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BTB	PF00651	49 - 153	8.8e-15	BTB/POZ domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005450)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G15840 AT4G15840
fragaria_vesca	FvH4_4g18240 FvH4_4g18240 FvH4_4g18240 FvH4_4g18240 FvH4_4g18240 FvH4_4g18240 FvH4_4g18240
malus_domestica	MD08G1066800.v1.1 MD13G1167900.v1.1
prunus_persica	Prupe.1G135400_v2.0.a1 Prupe.1G135400_v2.0.a1 Prupe.1G135400_v2.0.a1 Prupe.1G135400_v2.0.a1
pyrus_communis	pycom13g14360
rosa_chinensis	RchiOBHm_Chr4g0422381
rosa_laevigata	RLG00000007614
rosa_multiflora	Rmu_sc0013245.1_g000001 Rmu_sc0034689.1_g000001
rosa_roxburghii	Rroxscaffold_5G00364500
rosa_rugosa	Rorug04G0179600 Rorug04G0179700
rosa_samantha	Rh4AG239100 Rh4AG239500 Rh4BG242700 Rh4CG254100 Rh4DG238200
rosa_wichuraiana	Rw4G020670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	173
AatII	GACGTC	1 cut(s)	171
Acc65I	GGTACC	2 cut(s)	652, 1613
AccB1I	GGYRCC	5 cut(s)	155, 572, 652, 1613, 2468
AccI	GTMKAC	1 cut(s)	1665
AccII	CGCG	2 cut(s)	46, 390
AclI	AACGTT	1 cut(s)	617
AclWI	GGATC	1 cut(s)	1402
AcoI	YGGCCR	2 cut(s)	352, 2212
AcsI	RAATTY	1 cut(s)	991
AcuI	CTGAAG	4 cut(s)	220, 404, 1690, 2214
AcyI	GRCGYC	3 cut(s)	156, 168, 2302
AfaI	GTAC	5 cut(s)	344, 654, 1615, 1716, 2196
AfiI	CCNNNNNNNGG	6 cut(s)	184, 237, 703, 1691, 1742, 2176
AflII	CTTAAG	1 cut(s)	2557
AflIII	ACRYGT	3 cut(s)	292, 1413, 1717
AjiI	CACGTC	1 cut(s)	1763
AjnI	CCWGG	4 cut(s)	1000, 1286, 1684, 2017
AjuI	GAANNNNNNNTTGG	4 cut(s)	1077, 1109, 1332, 1364
Alw21I	GWGCWC	5 cut(s)	134, 648, 692, 712, 2056
Alw26I	GTCTC	3 cut(s)	595, 749, 1863
Alw44I	GTGCAC	2 cut(s)	688, 2052
AlwI	GGATC	1 cut(s)	1402
AoxI	GGCC	9 cut(s)	56, 333, 352, 1142, 1699, 1709, 1793, 2212, 2553
ApaLI	GTGCAC	2 cut(s)	688, 2052
ApoI	RAATTY	1 cut(s)	991
AseI	ATTAAT	1 cut(s)	312
Asp718I	GGTACC	2 cut(s)	652, 1613
AspLEI	GCGC	3 cut(s)	158, 852, 1538
AspS9I	GGNCC	8 cut(s)	56, 254, 1025, 1142, 1198, 1733, 2290, 2553
AsuHPI	GGTGA	2 cut(s)	625, 1700
AvaII	GGWCC	5 cut(s)	254, 1025, 1198, 1733, 2290
BaeGI	GKGCMC	2 cut(s)	692, 2056
BalI	TGGCCA	2 cut(s)	354, 2214
BanI	GGYRCC	5 cut(s)	155, 572, 652, 1613, 2468
BanII	GRGCYC	3 cut(s)	134, 191, 648
BauI	CACGAG	2 cut(s)	1818, 2385
BbsI	GAAGAC	1 cut(s)	1318
Bbv12I	GWGCWC	5 cut(s)	134, 648, 692, 712, 2056
BccI	CCATC	8 cut(s)	1153, 1481, 1736, 1910, 1990, 2059, 2204, 2431
BceAI	ACGGC	1 cut(s)	348
BciT130I	CCWGG	4 cut(s)	1002, 1288, 1686, 2019
BciVI	GTATCC	2 cut(s)	998, 1616
BclI	TGATCA	1 cut(s)	733
BcoDI	GTCTC	3 cut(s)	595, 749, 1863
BfaI	CTAG	2 cut(s)	1884, 2046
BfmI	CTRYAG	4 cut(s)	1012, 1499, 1899, 2568
BfoI	RGCGCY	3 cut(s)	159, 853, 1539
BfrI	CTTAAG	1 cut(s)	2557
BfuI	GTATCC	2 cut(s)	998, 1616
BglII	AGATCT	1 cut(s)	2536
BlpI	GCTNAGC	1 cut(s)	1940
Bme1390I	CCNGG	4 cut(s)	1002, 1288, 1686, 2019
Bme18I	GGWCC	5 cut(s)	254, 1025, 1198, 1733, 2290
BmgBI	CACGTC	1 cut(s)	1763
BmgT120I	GGNCC	8 cut(s)	56, 254, 1025, 1142, 1198, 1733, 2290, 2553
BmrFI	CCNGG	4 cut(s)	1002, 1288, 1686, 2019
BmrI	ACTGGG	1 cut(s)	651
BmsI	GCATC	4 cut(s)	757, 1048, 1357, 1494
BmuI	ACTGGG	1 cut(s)	651
BpiI	GAAGAC	1 cut(s)	1318
BpmI	CTGGAG	2 cut(s)	1668, 1680
Bpu1102I	GCTNAGC	1 cut(s)	1940
BpuEI	CTTGAG	2 cut(s)	1472, 2280
BsaAI	YACGTR	1 cut(s)	1718
BsaBI	GATNNNNATC	1 cut(s)	732
BsaHI	GRCGYC	3 cut(s)	156, 168, 2302
BsaJI	CCNNGG	6 cut(s)	183, 257, 336, 576, 1287, 1945
BsaWI	WCCGGW	1 cut(s)	1619
BsaXI	ACNNNNNCTCC	2 cut(s)	519, 549
Bsc4I	CCNNNNNNNGG	6 cut(s)	184, 237, 703, 1691, 1742, 2176
Bse1I	ACTGG	3 cut(s)	657, 747, 1201
Bse3DI	GCAATG	1 cut(s)	1217
Bse8I	GATNNNNATC	1 cut(s)	732
BseBI	CCWGG	4 cut(s)	1002, 1288, 1686, 2019
BseDI	CCNNGG	6 cut(s)	183, 257, 336, 576, 1287, 1945
BseGI	GGATG	3 cut(s)	213, 772, 2197
BseJI	GATNNNNATC	1 cut(s)	732
BseLI	CCNNNNNNNGG	6 cut(s)	184, 237, 703, 1691, 1742, 2176
BseMI	GCAATG	1 cut(s)	1217
BseMII	CTCAG	4 cut(s)	998, 1665, 2218, 2331
BseNI	ACTGG	3 cut(s)	657, 747, 1201
BseRI	GAGGAG	1 cut(s)	1269
BseSI	GKGCMC	2 cut(s)	692, 2056
BseYI	CCCAGC	3 cut(s)	549, 1780, 2496
BsgI	GTGCAG	2 cut(s)	2081, 2387
Bsh1236I	CGCG	2 cut(s)	46, 390
Bsh1285I	CGRYCG	1 cut(s)	117
BshFI	GGCC	9 cut(s)	58, 335, 354, 1144, 1701, 1711, 1795, 2214, 2555
BshNI	GGYRCC	5 cut(s)	155, 572, 652, 1613, 2468
BsiEI	CGRYCG	1 cut(s)	117
BsiHKAI	GWGCWC	5 cut(s)	134, 648, 692, 712, 2056
BsiSI	CCGG	2 cut(s)	153, 1620
BslFI	GGGAC	4 cut(s)	775, 891, 1211, 1763
BslI	CCNNNNNNNGG	6 cut(s)	184, 237, 703, 1691, 1742, 2176
BsmAI	GTCTC	3 cut(s)	595, 749, 1863
BsmFI	GGGAC	4 cut(s)	775, 891, 1211, 1763
BsmI	GAATGC	1 cut(s)	2019
BsnI	GGCC	9 cut(s)	58, 335, 354, 1144, 1701, 1711, 1795, 2214, 2555
Bsp1286I	GDGCHC	6 cut(s)	134, 191, 648, 692, 712, 2056
Bsp1407I	TGTACA	1 cut(s)	2194
Bsp143I	GATC	4 cut(s)	415, 733, 1394, 2536
Bsp1720I	GCTNAGC	1 cut(s)	1940
Bsp19I	CCATGG	2 cut(s)	183, 576
BspANI	GGCC	9 cut(s)	58, 335, 354, 1144, 1701, 1711, 1795, 2214, 2555
BspCNI	CTCAG	4 cut(s)	997, 1666, 2217, 2332
BspFNI	CGCG	2 cut(s)	46, 390
BspMAI	CTGCAG	4 cut(s)	1016, 1503, 1903, 2572
BspPI	GGATC	1 cut(s)	1402
BspT107I	GGYRCC	5 cut(s)	155, 572, 652, 1613, 2468
BspTI	CTTAAG	1 cut(s)	2557
BsrDI	GCAATG	1 cut(s)	1217
BsrGI	TGTACA	1 cut(s)	2194
BsrI	ACTGG	3 cut(s)	657, 747, 1201
BssECI	CCNNGG	6 cut(s)	183, 257, 336, 576, 1287, 1945
BssMI	GATC	4 cut(s)	415, 733, 1394, 2536
BssNAI	GTATAC	1 cut(s)	1666
BssNI	GRCGYC	3 cut(s)	156, 168, 2302
BssSI	CACGAG	2 cut(s)	1818, 2385
BssT1I	CCWWGG	5 cut(s)	183, 257, 336, 576, 1945
Bst1107I	GTATAC	1 cut(s)	1666
Bst2BI	CACGAG	2 cut(s)	1818, 2385
Bst2UI	CCWGG	4 cut(s)	1002, 1288, 1686, 2019
Bst4CI	ACNGT	4 cut(s)	465, 672, 920, 2117
Bst6I	CTCTTC	6 cut(s)	657, 1234, 1404, 1660, 1709, 2233
BstACI	GRCGYC	3 cut(s)	156, 168, 2302
BstAFI	CTTAAG	1 cut(s)	2557
BstAPI	GCANNNNNTGC	2 cut(s)	1554, 1575
BstAUI	TGTACA	1 cut(s)	2194
BstBAI	YACGTR	1 cut(s)	1718
BstDEI	CTNAG	7 cut(s)	368, 481, 984, 1674, 1940, 2204, 2340
BstDSI	CCRYGG	2 cut(s)	183, 576
BstENI	CCTNNNNNAGG	2 cut(s)	235, 701
BstF5I	GGATG	3 cut(s)	213, 772, 2197
BstFNI	CGCG	2 cut(s)	46, 390
BstH2I	RGCGCY	3 cut(s)	159, 853, 1539
BstHHI	GCGC	3 cut(s)	158, 852, 1538
BstKTI	GATC	4 cut(s)	418, 736, 1397, 2539
BstMAI	GTCTC	3 cut(s)	595, 749, 1863
BstMBI	GATC	4 cut(s)	415, 733, 1394, 2536
BstMCI	CGRYCG	1 cut(s)	117
BstMWI	GCNNNNNNNGC	6 cut(s)	14, 99, 125, 1504, 1554, 1575
BstNI	CCWGG	4 cut(s)	1002, 1288, 1686, 2019
BstNSI	RCATGY	7 cut(s)	296, 1276, 1417, 1548, 1578, 1633, 1727
BstSCI	CCNGG	4 cut(s)	1000, 1286, 1684, 2017
BstSFI	CTRYAG	4 cut(s)	1012, 1499, 1899, 2568
BstSLI	GKGCMC	2 cut(s)	692, 2056
BstUI	CGCG	2 cut(s)	46, 390
BstV2I	GAAGAC	1 cut(s)	1318
BstX2I	RGATCY	2 cut(s)	1394, 2536
BstXI	CCANNNNNNTGG	3 cut(s)	1257, 2090, 2131
BstYI	RGATCY	2 cut(s)	1394, 2536
BstZ17I	GTATAC	1 cut(s)	1666
BsuI	GTATCC	2 cut(s)	998, 1616
BsuRI	GGCC	9 cut(s)	58, 335, 354, 1144, 1701, 1711, 1795, 2214, 2555
BtgI	CCRYGG	2 cut(s)	183, 576
BtrI	CACGTC	1 cut(s)	1763
BtsCI	GGATG	3 cut(s)	213, 772, 2197
BtsI	GCAGTG	2 cut(s)	1896, 2577
BtsIMutI	CAGTG	7 cut(s)	441, 664, 1671, 1896, 2040, 2212, 2577
CfoI	GCGC	3 cut(s)	158, 852, 1538
Cfr13I	GGNCC	8 cut(s)	56, 254, 1025, 1142, 1198, 1733, 2290, 2553
CseI	GACGC	2 cut(s)	52, 2310
Csp6I	GTAC	5 cut(s)	343, 653, 1614, 1715, 2195
CviQI	GTAC	5 cut(s)	343, 653, 1614, 1715, 2195
DdeI	CTNAG	7 cut(s)	368, 481, 984, 1674, 1940, 2204, 2340
DinI	GGCGCC	1 cut(s)	157
DpnI	GATC	4 cut(s)	417, 735, 1396, 2538
DpnII	GATC	4 cut(s)	415, 733, 1394, 2536
DraI	TTTAAA	2 cut(s)	1173, 2151
DrdI	GACNNNNNNGTC	1 cut(s)	173
DseDI	GACNNNNNNGTC	1 cut(s)	173
EaeI	YGGCCR	2 cut(s)	352, 2212
Eam1104I	CTCTTC	6 cut(s)	657, 1234, 1404, 1660, 1709, 2233
EarI	CTCTTC	6 cut(s)	657, 1234, 1404, 1660, 1709, 2233
Ecl136II	GAGCTC	2 cut(s)	132, 646
Eco130I	CCWWGG	5 cut(s)	183, 257, 336, 576, 1945
Eco147I	AGGCCT	1 cut(s)	1711
Eco24I	GRGCYC	3 cut(s)	134, 191, 648
Eco47I	GGWCC	5 cut(s)	254, 1025, 1198, 1733, 2290
Eco53kI	GAGCTC	2 cut(s)	132, 646
Eco57I	CTGAAG	4 cut(s)	220, 404, 1690, 2214
EcoICRI	GAGCTC	2 cut(s)	132, 646
EcoNI	CCTNNNNNAGG	2 cut(s)	235, 701
EcoO109I	RGGNCCY	4 cut(s)	1025, 1733, 2290, 2553
EcoRII	CCWGG	4 cut(s)	1000, 1286, 1684, 2017
EcoT14I	CCWWGG	5 cut(s)	183, 257, 336, 576, 1945
EcoT22I	ATGCAT	1 cut(s)	1372
EcoT38I	GRGCYC	3 cut(s)	134, 191, 648
EgeI	GGCGCC	1 cut(s)	157
EheI	GGCGCC	1 cut(s)	157
ErhI	CCWWGG	5 cut(s)	183, 257, 336, 576, 1945
FalI	AAGNNNNNCTT	6 cut(s)	529, 561, 579, 611, 1326, 1358
FaqI	GGGAC	4 cut(s)	775, 891, 1211, 1763
FauI	CCCGC	2 cut(s)	230, 2411
FbaI	TGATCA	1 cut(s)	733
FblI	GTMKAC	1 cut(s)	1665
FokI	GGATG	3 cut(s)	200, 779, 2204
FriOI	GRGCYC	3 cut(s)	134, 191, 648
FspBI	CTAG	2 cut(s)	1884, 2046
GlaI	GCGC	3 cut(s)	157, 851, 1537
GsaI	CCCAGC	3 cut(s)	553, 1784, 2500
GsuI	CTGGAG	2 cut(s)	1668, 1680
HaeII	RGCGCY	3 cut(s)	159, 853, 1539
HaeIII	GGCC	9 cut(s)	58, 335, 354, 1144, 1701, 1711, 1795, 2214, 2555
HapII	CCGG	2 cut(s)	153, 1620
HgaI	GACGC	2 cut(s)	52, 2310
HhaI	GCGC	3 cut(s)	158, 852, 1538
Hin1I	GRCGYC	3 cut(s)	156, 168, 2302
Hin6I	GCGC	3 cut(s)	156, 850, 1536
HinP1I	GCGC	3 cut(s)	156, 850, 1536
HincII	GTYRAC	1 cut(s)	928
HindII	GTYRAC	1 cut(s)	928
HindIII	AAGCTT	1 cut(s)	365
HinfI	GANTC	9 cut(s)	76, 779, 802, 836, 1676, 1874, 2072, 2202, 2381
HpaII	CCGG	2 cut(s)	153, 1620
HphI	GGTGA	2 cut(s)	625, 1700
Hpy166II	GTNNAC	6 cut(s)	468, 690, 928, 1666, 2054, 2197
Hpy188III	TCNNGA	7 cut(s)	238, 413, 422, 1526, 1659, 1911, 2387
Hpy8I	GTNNAC	6 cut(s)	468, 690, 928, 1666, 2054, 2197
Hpy99I	CGWCG	4 cut(s)	46, 170, 334, 2334
HpyAV	CCTTC	9 cut(s)	134, 169, 908, 1038, 1148, 1382, 1685, 2254, 2485
HpyCH4III	ACNGT	4 cut(s)	465, 672, 920, 2117
HpyCH4IV	ACGT	5 cut(s)	168, 617, 1717, 1762, 2332
HpyF10VI	GCNNNNNNNGC	6 cut(s)	14, 99, 125, 1504, 1554, 1575
HpyF3I	CTNAG	7 cut(s)	368, 481, 984, 1674, 1940, 2204, 2340
HpySE526I	ACGT	5 cut(s)	168, 617, 1717, 1762, 2332
Hsp92I	GRCGYC	3 cut(s)	156, 168, 2302
HspAI	GCGC	3 cut(s)	156, 850, 1536
KasI	GGCGCC	1 cut(s)	155
KpnI	GGTACC	2 cut(s)	656, 1617
Ksp22I	TGATCA	1 cut(s)	733
Kzo9I	GATC	4 cut(s)	415, 733, 1394, 2536
LmnI	GCTCC	5 cut(s)	137, 194, 280, 1687, 2491
LweI	GCATC	4 cut(s)	757, 1048, 1357, 1494
MaeI	CTAG	2 cut(s)	1884, 2046
MaeII	ACGT	5 cut(s)	168, 617, 1717, 1762, 2332
MaeIII	GTNAC	5 cut(s)	283, 893, 1649, 1952, 2395
MalI	GATC	4 cut(s)	417, 735, 1396, 2538
MboI	GATC	4 cut(s)	415, 733, 1394, 2536
MfeI	CAATTG	1 cut(s)	324
MflI	RGATCY	2 cut(s)	1394, 2536
MhlI	GDGCHC	6 cut(s)	134, 191, 648, 692, 712, 2056
MlsI	TGGCCA	2 cut(s)	354, 2214
MluCI	AATT	8 cut(s)	324, 842, 991, 1062, 1530, 1592, 1846, 2183
MluNI	TGGCCA	2 cut(s)	354, 2214
Mly113I	GGCGCC	1 cut(s)	156
MlyI	GAGTC	4 cut(s)	845, 1685, 2081, 2196
MmeI	TCCRAC	5 cut(s)	131, 189, 813, 1081, 1823
Mox20I	TGGCCA	2 cut(s)	354, 2214
Mph1103I	ATGCAT	1 cut(s)	1372
MscI	TGGCCA	2 cut(s)	354, 2214
MseI	TTAA	8 cut(s)	312, 854, 1038, 1172, 1320, 2150, 2280, 2558
MslI	CAYNNNNRTG	2 cut(s)	297, 2033
Msp20I	TGGCCA	2 cut(s)	354, 2214
MspA1I	CMGCKG	1 cut(s)	125
MspCI	CTTAAG	1 cut(s)	2557
MspI	CCGG	2 cut(s)	153, 1620
MspR9I	CCNGG	4 cut(s)	1002, 1288, 1686, 2019
MunI	CAATTG	1 cut(s)	324
Mva1269I	GAATGC	1 cut(s)	2019
MvaI	CCWGG	4 cut(s)	1002, 1288, 1686, 2019
MvnI	CGCG	2 cut(s)	46, 390
MwoI	GCNNNNNNNGC	6 cut(s)	14, 99, 125, 1504, 1554, 1575
NarI	GGCGCC	1 cut(s)	156
NcoI	CCATGG	2 cut(s)	183, 576
NdeII	GATC	4 cut(s)	415, 733, 1394, 2536
NmuCI	GTSAC	1 cut(s)	283
NsiI	ATGCAT	1 cut(s)	1372
NspI	RCATGY	7 cut(s)	296, 1276, 1417, 1548, 1578, 1633, 1727
PaeI	GCATGC	2 cut(s)	1276, 1578
PceI	AGGCCT	1 cut(s)	1711
PciI	ACATGT	2 cut(s)	292, 1413
PcsI	WCGNNNNNNNCGW	1 cut(s)	338
PctI	GAATGC	1 cut(s)	2019
PfeI	GAWTC	5 cut(s)	76, 779, 802, 1874, 2381
PleI	GAGTC	4 cut(s)	844, 1684, 2080, 2196
PluTI	GGCGCC	1 cut(s)	159
PpsI	GAGTC	4 cut(s)	844, 1684, 2080, 2196
Ppu21I	YACGTR	1 cut(s)	1718
PpuMI	RGGWCCY	3 cut(s)	1025, 1733, 2290
PscI	ACATGT	2 cut(s)	292, 1413
PshBI	ATTAAT	1 cut(s)	312
Psp124BI	GAGCTC	2 cut(s)	134, 648
Psp1406I	AACGTT	1 cut(s)	617
Psp5II	RGGWCCY	3 cut(s)	1025, 1733, 2290
Psp6I	CCWGG	4 cut(s)	1000, 1286, 1684, 2017
PspFI	CCCAGC	3 cut(s)	549, 1780, 2496
PspGI	CCWGG	4 cut(s)	1000, 1286, 1684, 2017
PspPI	GGNCC	8 cut(s)	56, 254, 1025, 1142, 1198, 1733, 2290, 2553
PspPPI	RGGWCCY	3 cut(s)	1025, 1733, 2290
PstI	CTGCAG	4 cut(s)	1016, 1503, 1903, 2572
PsuI	RGATCY	2 cut(s)	1394, 2536
RsaI	GTAC	5 cut(s)	344, 654, 1615, 1716, 2196
RsaNI	GTAC	5 cut(s)	343, 653, 1614, 1715, 2195
RseI	CAYNNNNRTG	2 cut(s)	297, 2033
SacI	GAGCTC	2 cut(s)	134, 648
SaqAI	TTAA	8 cut(s)	312, 854, 1038, 1172, 1320, 2150, 2280, 2558
Sau3AI	GATC	4 cut(s)	415, 733, 1394, 2536
Sau96I	GGNCC	8 cut(s)	56, 254, 1025, 1142, 1198, 1733, 2290, 2553
SchI	GAGTC	4 cut(s)	845, 1685, 2081, 2196
ScrFI	CCNGG	4 cut(s)	1002, 1288, 1686, 2019
SduI	GDGCHC	6 cut(s)	134, 191, 648, 692, 712, 2056
SfaNI	GCATC	4 cut(s)	757, 1048, 1357, 1494
SfcI	CTRYAG	4 cut(s)	1012, 1499, 1899, 2568
SfoI	GGCGCC	1 cut(s)	157
SinI	GGWCC	5 cut(s)	254, 1025, 1198, 1733, 2290
SmiI	ATTTAAAT	1 cut(s)	1173
SmiMI	CAYNNNNRTG	2 cut(s)	297, 2033
SmlI	CTYRAG	3 cut(s)	1451, 2295, 2557
SmoI	CTYRAG	3 cut(s)	1451, 2295, 2557
SphI	GCATGC	2 cut(s)	1276, 1578
Sse9I	AATT	8 cut(s)	324, 842, 991, 1062, 1530, 1592, 1846, 2183
SseBI	AGGCCT	1 cut(s)	1711
SspDI	GGCGCC	1 cut(s)	155
SspI	AATATT	1 cut(s)	310
SspMI	CTAG	2 cut(s)	1884, 2046
SstI	GAGCTC	2 cut(s)	134, 648
StuI	AGGCCT	1 cut(s)	1711
StyD4I	CCNGG	4 cut(s)	1000, 1286, 1684, 2017
StyI	CCWWGG	5 cut(s)	183, 257, 336, 576, 1945
SwaI	ATTTAAAT	1 cut(s)	1173
TaaI	ACNGT	4 cut(s)	465, 672, 920, 2117
TaiI	ACGT	5 cut(s)	171, 620, 1720, 1765, 2335
TaqI	TCGA	1 cut(s)	2379
TasI	AATT	8 cut(s)	324, 842, 991, 1062, 1530, 1592, 1846, 2183
TatI	WGTACW	1 cut(s)	2194
TauI	GCSGC	3 cut(s)	61, 128, 1790
TfiI	GAWTC	5 cut(s)	76, 779, 802, 1874, 2381
Tru1I	TTAA	8 cut(s)	312, 854, 1038, 1172, 1320, 2150, 2280, 2558
Tru9I	TTAA	8 cut(s)	312, 854, 1038, 1172, 1320, 2150, 2280, 2558
TscAI	CASTG	7 cut(s)	448, 664, 1678, 1903, 2040, 2212, 2577
TseFI	GTSAC	1 cut(s)	283
Tsp45I	GTSAC	1 cut(s)	283
TspDTI	ATGAA	9 cut(s)	80, 239, 439, 1020, 1062, 1167, 1238, 2153, 2541
TspGWI	ACGGA	1 cut(s)	779
TspRI	CASTG	7 cut(s)	448, 664, 1678, 1903, 2040, 2212, 2577
Vha464I	CTTAAG	1 cut(s)	2557
VneI	GTGCAC	2 cut(s)	688, 2052
VpaK11BI	GGWCC	5 cut(s)	254, 1025, 1198, 1733, 2290
VspI	ATTAAT	1 cut(s)	312
XagI	CCTNNNNNAGG	2 cut(s)	235, 701
XapI	RAATTY	1 cut(s)	991
XceI	RCATGY	7 cut(s)	296, 1276, 1417, 1548, 1578, 1633, 1727
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1788
XmiI	GTMKAC	1 cut(s)	1665
XspI	CTAG	2 cut(s)	1884, 2046
ZraI	GACGTC	1 cut(s)	169
Zsp2I	ATGCAT	1 cut(s)	1372

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.