Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0005479

Physical Location & Seq

Genomic Coordinates Forward (+)

22929124 .. 22933403

Gene Structure 4280 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g19230.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2031 bp

ATGAATCTTCAAAACGGTCGAGGATCTGTTTCAACGGCCAGTTCCAGTGGCGCGTGGAAGTCGGGAGAGACCGTACCTGACCAGTTTCCTGCGGGTTTAAGGGTCTTGGTGGTTGACGATGATCCTACTTGTCTAATGATCTTGGAGAAGATGCTCCGTACTTGTCTCTATGAAGTTACGAAATGTAAACGAGCTGAGATCGCACTGTCCTTGCTGCGAGAGAACAAAAATGGATATGATGTAGTTATTAGTGACGTCCACATGCCGGACATGGATGGATTCAAGCTGCTCGAGCACATTGGATTAGAGATGGACCTGCCGGTCATCATGATGTCTGCTGATGATGGGAAAAGTGTTGTTATGAAGGGTGTGACTCATGGTGCTTGTGATTATCTAATTAAACCAGTCCGGATTGAGGCGTTAAAGAACATATGGCAGCATGTAGTTCGAAAGAAGAAGAATGAGTGGAAGGATGTGGAGCAATCCGGAAGTGTGGATGAAGGAGATCGGCAACAAAAACCATGCGAAGAACCGGATTACTCATCCTCGGCAAATGAAGGCACTTGGAAGAACTCAAAGAAGAGGAAGGATGAGGATGAGGATGCGGAGGACAGGGATGATACATCCACGCTAAAGAAGCCGCGGGTGGTTTGGTCAGTTGAGCTCCATCAACAATTTGTCGGTGCTGTCAATCAACTAGGCATTGATAAGGCGGTTCCTAAGAAAATTTTGGAGTTGATGAATGTTCCTGGGCTCACTAGAGAAAATGTTGCTAGCCATCTACAGAAATATCGGCTGTACCTTAGAAGGTTGAGTGGAGTATCGCAGCACCAGAGTAATTTGAGCAACTCTTTCATAAGTTCTCAAGAAGCATCTTTTGGAGCAATGTCGTCACTCAATGGGATTGATCTTCAAACTCTAGCCGCCACTGGTCAACTTCCTGCTCAAAGCCTTGCCACACTTCAAGCGGCCGGGCTTGGTAGGTCAACAGCAAAATCTGGCATACCAATGCCCCTTGTTGATCAAAGGAACTTGTTCAGCTTTGAAAATCCAAAATTGAGGTTTGCAGAGGGGCAGCAACATCATAGCAGTGGTAAACCAATGAACTTACTTCACGGCATTCCAACAACTATGGAGGCAAAGCAGCTTGCCAACTTGCACCAGTCTGCACAATCCCTTGGGGCTGTGAATATGCAAGTCAATCCCCATGGAGTCCAAAACAGCTCTCTATATATGATAGGTCAACCACAGTCGAGAGGGCAGATCATGAATGAAAGTACCGGGACTCATGTTCCTAGGCTTCCATCATCAATTGGGCAGCCTATGGTATCAAACGGGATTCCTACTGGAGTTATAGGAAGAAATGGGATTTCTGATGGTGGCAGAGGGACAGGATATAATCCAGTGCCACAGAACTCTTCAATGTTGAATTTTCCCTTGAACAACACTCCAGAACTGACAGGCAATAGTTATACACTTGGCAGTACCCAAGGGATGTCCAGCCTCACGCCTAAAGGGTCATTTCCAGAAGAGGTTAACTCTGAAATAAAGAGATCTGGGGGATTGGTTCCAAGCTATGATATATTCAATGAGTTACAGCAGCACAAATCCAATGATTGGAATTTACAGAATGTAGGCTTGACCTTTGATGCCTCTCACCATGCAAACTCAGTCCATGGTGGCCTCGACTCCTCAGGTTTAGTTCACCAAGGTTTTCCTTCTAACCAAAGGAATGGACAGAGTCGGAATTCATCTAATGTTGGTAAACCTATGTTCCCAATGGGAGCAAGCACTGATCAGGGGCACATGCAAAATACTAGTCAACACCTAAGCAACAATCTTATTGTTGACAATACAGTTCGGATTAAATCTGAAAGGCTTTCTGATGCATCTCAAAATAGCTTCTTTCATGATCAATATGGTCAGGACGATCTAATGAGTGCACTTCTCAAACAGCAGCAAGGGGGAGTTGGACCAGCTGAAAATGAGTTCGACTTTGATGGGTATTCCTTGGACAATATTCCTGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000156 GO:0000160 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0009653 GO:0009719 GO:0009723 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009873 GO:0009888 GO:0009889 GO:0009987 GO:0010015 GO:0010033 GO:0010073 GO:0010075 GO:0010082 GO:0010119 GO:0010150 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022622 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0035556 GO:0040008 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048638 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0051716 GO:0060089 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071369 GO:0071495 GO:0080050 GO:0080090 GO:0080113 GO:0090693 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:2000026 GO:2000112 GO:2000241 GO:2000280 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Myb_DNA-binding Response_reg

Protein Analysis

677

Amino Acids

73.81

Weight (kDa)

6.1

Isoelectric Point (pI)

42.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Response_reg	PF00072	35 - 143	2.5e-23	Response regulator receiver domain
Myb_DNA-binding	PF00249	215 - 265	7.5e-08	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005479)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16857 AT3G16857 AT3G16857
fragaria_vesca	FvH4_4g19230 FvH4_4g19230
malus_domestica	MD13G1159700.v1.1 MD16G1159400.v1.1
prunus_persica	Prupe.1G126400_v2.0.a1 Prupe.1G126400_v2.0.a1
pyrus_communis	pycom13g13610 pycom16g13440
rosa_chinensis	RchiOBHm_Chr4g0424211
rosa_laevigata	RLG00000007496
rosa_multiflora	Rmu_co8430763.1_g000001 Rmu_sc0002260.1_g000035 Rmu_sc0019001.1_g000002 Rmu_sc0028069.1_g000001 Rmu_sc0028070.1_g000001
rosa_roxburghii	Rroxscaffold_5G00366160
rosa_rugosa	Rorug04G0193900 Rorug04G0194000 Rorug04G0194100 Rorug04G0194200 Rorug04G0194300
rosa_samantha	Rh4AG251700 Rh4BG257000 Rh4CG267600 Rh4DG251400
rosa_wichuraiana	Rw4G021700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	320
AatII	GACGTC	1 cut(s)	258
Acc36I	ACCTGC	1 cut(s)	324
AccB7I	CCANNNNNTGG	1 cut(s)	1617
AccII	CGCG	2 cut(s)	53, 643
AccIII	TCCGGA	2 cut(s)	408, 485
AciI	CCGC	7 cut(s)	92, 605, 641, 643, 713, 924, 968
AclWI	GGATC	2 cut(s)	31, 116
AcoI	YGGCCR	2 cut(s)	36, 969
AcsI	RAATTY	4 cut(s)	726, 1429, 1621, 1747
AcyI	GRCGYC	1 cut(s)	255
AfaI	GTAC	5 cut(s)	75, 160, 800, 1279, 1486
AfiI	CCNNNNNNNGG	3 cut(s)	265, 415, 1617
AhlI	ACTAGT	1 cut(s)	1817
AjnI	CCWGG	1 cut(s)	748
AjuI	GAANNNNNNNTTGG	2 cut(s)	861, 893
AluBI	AGCT	9 cut(s)	194, 286, 664, 1041, 1147, 1224, 1575, 1902, 1979
AluI	AGCT	9 cut(s)	194, 286, 664, 1041, 1147, 1224, 1575, 1902, 1979
Alw21I	GWGCWC	3 cut(s)	297, 666, 1945
Alw26I	GTCTC	2 cut(s)	62, 170
Alw44I	GTGCAC	1 cut(s)	1941
AlwI	GGATC	2 cut(s)	31, 116
Ama87I	CYCGRG	1 cut(s)	290
Aor13HI	TCCGGA	2 cut(s)	408, 485
AoxI	GGCC	3 cut(s)	36, 969, 1681
ApaLI	GTGCAC	1 cut(s)	1941
ApeKI	GCWGC	9 cut(s)	214, 286, 436, 826, 1075, 1144, 1318, 1600, 1957
ApoI	RAATTY	4 cut(s)	726, 1429, 1621, 1747
ArsI	GACNNNNNNTTYG	2 cut(s)	1804, 1836
Asp700I	GAANNNNTTC	1 cut(s)	1034
AspA2I	CCTAGG	1 cut(s)	1295
AspLEI	GCGC	1 cut(s)	53
AspS9I	GGNCC	2 cut(s)	313, 1973
AsuC2I	CCSGG	2 cut(s)	973, 1282
AsuHPI	GGTGA	2 cut(s)	1649, 1697
AsuII	TTCGAA	1 cut(s)	448
AsuNHI	GCTAGC	1 cut(s)	773
AvaI	CYCGRG	1 cut(s)	290
AvaII	GGWCC	2 cut(s)	313, 1973
AvrII	CCTAGG	1 cut(s)	1295
AxyI	CCTNAGG	1 cut(s)	1693
BaeGI	GKGCMC	2 cut(s)	1806, 1945
BanII	GRGCYC	2 cut(s)	666, 756
Bbv12I	GWGCWC	3 cut(s)	297, 666, 1945
BbvI	GCAGC	9 cut(s)	201, 273, 448, 838, 1087, 1156, 1330, 1612, 1969
BccI	CCATC	8 cut(s)	269, 304, 338, 675, 786, 1312, 1370, 1994
BceAI	ACGGC	2 cut(s)	51, 1132
BcgI	CGANNNNNNTGC	2 cut(s)	428, 462
BciT130I	CCWGG	1 cut(s)	750
BclI	TGATCA	3 cut(s)	1021, 1795, 1912
BcnI	CCSGG	2 cut(s)	973, 1282
BcoDI	GTCTC	2 cut(s)	62, 170
BcuI	ACTAGT	1 cut(s)	1817
BfaI	CTAG	6 cut(s)	698, 759, 774, 920, 1296, 1818
BfmI	CTRYAG	1 cut(s)	782
BfuAI	ACCTGC	1 cut(s)	324
BglII	AGATCT	1 cut(s)	1553
BlnI	CCTAGG	1 cut(s)	1295
Bme1390I	CCNGG	3 cut(s)	750, 973, 1282
Bme18I	GGWCC	2 cut(s)	313, 1973
BmeT110I	CYCGRG	1 cut(s)	290
BmgT120I	GGNCC	2 cut(s)	313, 1973
BmiI	GGNNCC	2 cut(s)	717, 1569
BmrFI	CCNGG	3 cut(s)	750, 973, 1282
BmsI	GCATC	6 cut(s)	141, 592, 881, 1639, 1876, 1898
BmtI	GCTAGC	1 cut(s)	777
BplI	GAGNNNNNCTC	2 cut(s)	1523, 1555
BpmI	CTGGAG	2 cut(s)	1368, 1434
Bpu10I	CCTNAGC	1 cut(s)	1829
Bpu14I	TTCGAA	1 cut(s)	448
BpuEI	CTTGAG	1 cut(s)	849
BpuMI	CCSGG	2 cut(s)	973, 1282
BsaHI	GRCGYC	1 cut(s)	255
BsaI	GGTCTC	1 cut(s)	62
BsaWI	WCCGGW	3 cut(s)	408, 485, 532
BsaXI	ACNNNNNCTCC	2 cut(s)	57, 87
Bsc4I	CCNNNNNNNGG	3 cut(s)	265, 415, 1617
Bse118I	RCCGGY	1 cut(s)	319
Bse1I	ACTGG	8 cut(s)	39, 45, 82, 404, 934, 1162, 1351, 1403
Bse21I	CCTNAGG	1 cut(s)	1693
Bse3DI	GCAATG	1 cut(s)	891
BseAI	TCCGGA	2 cut(s)	408, 485
BseBI	CCWGG	1 cut(s)	750
BseLI	CCNNNNNNNGG	3 cut(s)	265, 415, 1617
BseMI	GCAATG	1 cut(s)	891
BseMII	CTCAG	3 cut(s)	186, 1683, 1707
BseNI	ACTGG	8 cut(s)	39, 45, 82, 404, 934, 1162, 1351, 1403
BseRI	GAGGAG	1 cut(s)	1681
BseSI	GKGCMC	2 cut(s)	1806, 1945
BseX3I	CGGCCG	1 cut(s)	969
BseXI	GCAGC	9 cut(s)	201, 273, 448, 838, 1087, 1156, 1330, 1612, 1969
BsgI	GTGCAG	1 cut(s)	1152
Bsh1236I	CGCG	2 cut(s)	53, 643
Bsh1285I	CGRYCG	2 cut(s)	19, 972
BshFI	GGCC	3 cut(s)	38, 971, 1683
BsiEI	CGRYCG	2 cut(s)	19, 972
BsiHKAI	GWGCWC	3 cut(s)	297, 666, 1945
BsiHKCI	CYCGRG	1 cut(s)	290
BsiSI	CCGG	7 cut(s)	266, 320, 409, 486, 533, 972, 1281
BslFI	GGGAC	2 cut(s)	1297, 1402
BslI	CCNNNNNNNGG	3 cut(s)	265, 415, 1617
BsmAI	GTCTC	2 cut(s)	62, 170
BsmFI	GGGAC	2 cut(s)	1297, 1402
BsmI	GAATGC	1 cut(s)	1119
BsnI	GGCC	3 cut(s)	38, 971, 1683
Bso31I	GGTCTC	1 cut(s)	62
BsoBI	CYCGRG	1 cut(s)	290
Bsp119I	TTCGAA	1 cut(s)	448
Bsp1286I	GDGCHC	5 cut(s)	297, 666, 756, 1806, 1945
Bsp13I	TCCGGA	2 cut(s)	408, 485
Bsp19I	CCATGG	2 cut(s)	1207, 1675
BspACI	CCGC	7 cut(s)	92, 605, 641, 643, 713, 924, 968
BspANI	GGCC	3 cut(s)	38, 971, 1683
BspCNI	CTCAG	3 cut(s)	187, 1682, 1706
BspEI	TCCGGA	2 cut(s)	408, 485
BspFNI	CGCG	2 cut(s)	53, 643
BspHI	TCATGA	3 cut(s)	327, 1266, 1909
BspLI	GGNNCC	2 cut(s)	717, 1569
BspMI	ACCTGC	1 cut(s)	324
BspOI	GCTAGC	1 cut(s)	777
BspPI	GGATC	2 cut(s)	31, 116
BspT104I	TTCGAA	1 cut(s)	448
BspTNI	GGTCTC	1 cut(s)	62
BsrDI	GCAATG	1 cut(s)	891
BsrFI	RCCGGY	1 cut(s)	319
BsrI	ACTGG	8 cut(s)	39, 45, 82, 404, 934, 1162, 1351, 1403
BssAI	RCCGGY	1 cut(s)	319
BssNI	GRCGYC	1 cut(s)	255
BssT1I	CCWWGG	7 cut(s)	1177, 1207, 1295, 1489, 1675, 1708, 2010
Bst2UI	CCWGG	1 cut(s)	750
Bst4CI	ACNGT	5 cut(s)	17, 73, 207, 1251, 1858
Bst6I	CTCTTC	3 cut(s)	575, 1423, 1524
BstACI	GRCGYC	1 cut(s)	255
BstBI	TTCGAA	1 cut(s)	448
BstC8I	GCNNGC	3 cut(s)	775, 1149, 1789
BstDEI	CTNAG	6 cut(s)	195, 720, 803, 1669, 1693, 1829
BstDSI	CCRYGG	3 cut(s)	641, 1207, 1675
BstFNI	CGCG	2 cut(s)	53, 643
BstHHI	GCGC	1 cut(s)	53
BstMAI	GTCTC	2 cut(s)	62, 170
BstMCI	CGRYCG	2 cut(s)	19, 972
BstMWI	GCNNNNNNNGC	3 cut(s)	200, 292, 637
BstNI	CCWGG	1 cut(s)	750
BstNSI	RCATGY	3 cut(s)	265, 443, 1810
BstSCI	CCNGG	3 cut(s)	748, 971, 1280
BstSFI	CTRYAG	1 cut(s)	782
BstSLI	GKGCMC	2 cut(s)	1806, 1945
BstUI	CGCG	2 cut(s)	53, 643
BstV1I	GCAGC	9 cut(s)	201, 273, 448, 838, 1087, 1156, 1330, 1612, 1969
BstX2I	RGATCY	2 cut(s)	23, 1553
BstXI	CCANNNNNNTGG	1 cut(s)	1733
BstYI	RGATCY	2 cut(s)	23, 1553
BstZI	CGGCCG	1 cut(s)	969
Bsu36I	CCTNAGG	1 cut(s)	1693
BsuRI	GGCC	3 cut(s)	38, 971, 1683
BtgI	CCRYGG	3 cut(s)	641, 1207, 1675
BtsI	GCAGTG	1 cut(s)	1096
BtsIMutI	CAGTG	6 cut(s)	52, 203, 927, 1096, 1410, 1791
BveI	ACCTGC	1 cut(s)	324
Cac8I	GCNNGC	3 cut(s)	775, 1149, 1789
CciI	TCATGA	3 cut(s)	327, 1266, 1909
CfoI	GCGC	1 cut(s)	53
Cfr10I	RCCGGY	1 cut(s)	319
Cfr13I	GGNCC	2 cut(s)	313, 1973
Cfr42I	CCGCGG	1 cut(s)	644
Csp6I	GTAC	5 cut(s)	74, 159, 799, 1278, 1485
CviQI	GTAC	5 cut(s)	74, 159, 799, 1278, 1485
DdeI	CTNAG	6 cut(s)	195, 720, 803, 1669, 1693, 1829
DrdI	GACNNNNNNGTC	1 cut(s)	320
DseDI	GACNNNNNNGTC	1 cut(s)	320
EaeI	YGGCCR	2 cut(s)	36, 969
EagI	CGGCCG	1 cut(s)	969
Eam1104I	CTCTTC	3 cut(s)	575, 1423, 1524
EarI	CTCTTC	3 cut(s)	575, 1423, 1524
Ecl136II	GAGCTC	1 cut(s)	664
EclXI	CGGCCG	1 cut(s)	969
Eco130I	CCWWGG	7 cut(s)	1177, 1207, 1295, 1489, 1675, 1708, 2010
Eco24I	GRGCYC	2 cut(s)	666, 756
Eco31I	GGTCTC	1 cut(s)	62
Eco47I	GGWCC	2 cut(s)	313, 1973
Eco52I	CGGCCG	1 cut(s)	969
Eco53kI	GAGCTC	1 cut(s)	664
Eco81I	CCTNAGG	1 cut(s)	1693
Eco88I	CYCGRG	1 cut(s)	290
EcoICRI	GAGCTC	1 cut(s)	664
EcoRI	GAATTC	1 cut(s)	1747
EcoRII	CCWGG	1 cut(s)	748
EcoT14I	CCWWGG	7 cut(s)	1177, 1207, 1295, 1489, 1675, 1708, 2010
EcoT22I	ATGCAT	1 cut(s)	1891
EcoT38I	GRGCYC	2 cut(s)	666, 756
ErhI	CCWWGG	7 cut(s)	1177, 1207, 1295, 1489, 1675, 1708, 2010
FaqI	GGGAC	2 cut(s)	1297, 1402
FauI	CCCGC	2 cut(s)	85, 636
FauNDI	CATATG	1 cut(s)	431
FbaI	TGATCA	3 cut(s)	1021, 1795, 1912
FriOI	GRGCYC	2 cut(s)	666, 756
FspBI	CTAG	6 cut(s)	698, 759, 774, 920, 1296, 1818
GlaI	GCGC	1 cut(s)	52
GsuI	CTGGAG	2 cut(s)	1368, 1434
HaeIII	GGCC	3 cut(s)	38, 971, 1683
HapII	CCGG	7 cut(s)	266, 320, 409, 486, 533, 972, 1281
HhaI	GCGC	1 cut(s)	53
Hin1I	GRCGYC	1 cut(s)	255
Hin6I	GCGC	1 cut(s)	51
HinP1I	GCGC	1 cut(s)	51
HincII	GTYRAC	7 cut(s)	115, 935, 987, 1244, 1537, 1823, 1849
HindII	GTYRAC	7 cut(s)	115, 935, 987, 1244, 1537, 1823, 1849
HinfI	GANTC	8 cut(s)	4, 279, 373, 1212, 1285, 1339, 1688, 1741
HpaI	GTTAAC	1 cut(s)	1537
HpaII	CCGG	7 cut(s)	266, 320, 409, 486, 533, 972, 1281
HphI	GGTGA	2 cut(s)	1649, 1697
Hpy188I	TCNGA	6 cut(s)	1375, 1543, 1746, 1863, 1873, 1885
HpyAV	CCTTC	7 cut(s)	358, 463, 494, 551, 580, 801, 1728
HpyCH4III	ACNGT	5 cut(s)	17, 73, 207, 1251, 1858
HpyCH4IV	ACGT	1 cut(s)	255
HpyCH4V	TGCA	8 cut(s)	1067, 1159, 1169, 1195, 1664, 1810, 1889, 1943
HpyF10VI	GCNNNNNNNGC	3 cut(s)	200, 292, 637
HpyF3I	CTNAG	6 cut(s)	195, 720, 803, 1669, 1693, 1829
HpySE526I	ACGT	1 cut(s)	255
Hsp92I	GRCGYC	1 cut(s)	255
HspAI	GCGC	1 cut(s)	51
Kpn2I	TCCGGA	2 cut(s)	408, 485
Ksp22I	TGATCA	3 cut(s)	1021, 1795, 1912
KspAI	GTTAAC	1 cut(s)	1537
KspI	CCGCGG	1 cut(s)	644
LmnI	GCTCC	5 cut(s)	159, 478, 669, 881, 1784
Lsp1109I	GCAGC	9 cut(s)	201, 273, 448, 838, 1087, 1156, 1330, 1612, 1969
LweI	GCATC	6 cut(s)	141, 592, 881, 1639, 1876, 1898
MaeI	CTAG	6 cut(s)	698, 759, 774, 920, 1296, 1818
MaeII	ACGT	1 cut(s)	255
MaeIII	GTNAC	5 cut(s)	175, 251, 370, 891, 1593
MfeI	CAATTG	1 cut(s)	1311
MflI	RGATCY	2 cut(s)	23, 1553
MhlI	GDGCHC	5 cut(s)	297, 666, 756, 1806, 1945
MluCI	AATT	9 cut(s)	396, 674, 726, 838, 1055, 1311, 1429, 1621, 1747
MlyI	GAGTC	5 cut(s)	367, 1221, 1279, 1682, 1750
MmeI	TCCRAC	3 cut(s)	1148, 1724, 1951
Mph1103I	ATGCAT	1 cut(s)	1891
MroI	TCCGGA	2 cut(s)	408, 485
MroXI	GAANNNNTTC	1 cut(s)	1034
MseI	TTAA	5 cut(s)	98, 399, 422, 1536, 1866
MslI	CAYNNNNRTG	3 cut(s)	329, 1007, 1089
MspA1I	CMGCKG	2 cut(s)	643, 1979
MspI	CCGG	7 cut(s)	266, 320, 409, 486, 533, 972, 1281
MspR9I	CCNGG	3 cut(s)	750, 973, 1282
MunI	CAATTG	1 cut(s)	1311
Mva1269I	GAATGC	1 cut(s)	1119
MvaI	CCWGG	1 cut(s)	750
MvnI	CGCG	2 cut(s)	53, 643
MwoI	GCNNNNNNNGC	3 cut(s)	200, 292, 637
NciI	CCSGG	2 cut(s)	973, 1282
NcoI	CCATGG	2 cut(s)	1207, 1675
NdeI	CATATG	1 cut(s)	431
NheI	GCTAGC	1 cut(s)	773
NlaIV	GGNNCC	2 cut(s)	717, 1569
NmeAIII	GCCGAG	1 cut(s)	527
NmuCI	GTSAC	3 cut(s)	251, 370, 891
NsiI	ATGCAT	1 cut(s)	1891
NspI	RCATGY	3 cut(s)	265, 443, 1810
NspV	TTCGAA	1 cut(s)	448
PaeR7I	CTCGAG	1 cut(s)	290
PagI	TCATGA	3 cut(s)	327, 1266, 1909
PctI	GAATGC	1 cut(s)	1119
PdmI	GAANNNNTTC	1 cut(s)	1034
PfeI	GAWTC	3 cut(s)	4, 279, 1339
PflFI	GACNNNGTC	1 cut(s)	1740
PflMI	CCANNNNNTGG	1 cut(s)	1617
PleI	GAGTC	5 cut(s)	367, 1220, 1279, 1682, 1749
PpsI	GAGTC	5 cut(s)	367, 1220, 1279, 1682, 1749
Psp124BI	GAGCTC	1 cut(s)	666
Psp6I	CCWGG	1 cut(s)	748
PspGI	CCWGG	1 cut(s)	748
PspN4I	GGNNCC	2 cut(s)	717, 1569
PspPI	GGNCC	2 cut(s)	313, 1973
PspXI	VCTCGAGB	1 cut(s)	290
PsuI	RGATCY	2 cut(s)	23, 1553
PsyI	GACNNNGTC	1 cut(s)	1740
PvuII	CAGCTG	1 cut(s)	1979
RsaI	GTAC	5 cut(s)	75, 160, 800, 1279, 1486
RsaNI	GTAC	5 cut(s)	74, 159, 799, 1278, 1485
RseI	CAYNNNNRTG	3 cut(s)	329, 1007, 1089
SacI	GAGCTC	1 cut(s)	666
SacII	CCGCGG	1 cut(s)	644
SaqAI	TTAA	5 cut(s)	98, 399, 422, 1536, 1866
Sau96I	GGNCC	2 cut(s)	313, 1973
SchI	GAGTC	5 cut(s)	367, 1221, 1279, 1682, 1750
ScrFI	CCNGG	3 cut(s)	750, 973, 1282
SduI	GDGCHC	5 cut(s)	297, 666, 756, 1806, 1945
SfaNI	GCATC	6 cut(s)	141, 592, 881, 1639, 1876, 1898
SfcI	CTRYAG	1 cut(s)	782
Sfr274I	CTCGAG	1 cut(s)	290
Sfr303I	CCGCGG	1 cut(s)	644
SfuI	TTCGAA	1 cut(s)	448
SgrBI	CCGCGG	1 cut(s)	644
SinI	GGWCC	2 cut(s)	313, 1973
SlaI	CTCGAG	1 cut(s)	290
SmiMI	CAYNNNNRTG	3 cut(s)	329, 1007, 1089
SmlI	CTYRAG	2 cut(s)	290, 864
SmoI	CTYRAG	2 cut(s)	290, 864
SpeI	ACTAGT	1 cut(s)	1817
Sse9I	AATT	9 cut(s)	396, 674, 726, 838, 1055, 1311, 1429, 1621, 1747
SsiI	CCGC	7 cut(s)	92, 605, 641, 643, 713, 924, 968
SspI	AATATT	1 cut(s)	2020
SspMI	CTAG	6 cut(s)	698, 759, 774, 920, 1296, 1818
SstI	GAGCTC	1 cut(s)	666
StyD4I	CCNGG	3 cut(s)	748, 971, 1280
StyI	CCWWGG	7 cut(s)	1177, 1207, 1295, 1489, 1675, 1708, 2010
TaaI	ACNGT	5 cut(s)	17, 73, 207, 1251, 1858
TaiI	ACGT	1 cut(s)	258
TaqI	TCGA	6 cut(s)	19, 291, 448, 1253, 1686, 1992
TasI	AATT	9 cut(s)	396, 674, 726, 838, 1055, 1311, 1429, 1621, 1747
TauI	GCSGC	3 cut(s)	643, 926, 971
TfiI	GAWTC	3 cut(s)	4, 279, 1339
Tru1I	TTAA	5 cut(s)	98, 399, 422, 1536, 1866
Tru9I	TTAA	5 cut(s)	98, 399, 422, 1536, 1866
TscAI	CASTG	6 cut(s)	52, 210, 934, 1096, 1410, 1798
TseFI	GTSAC	3 cut(s)	251, 370, 891
TseI	GCWGC	9 cut(s)	214, 286, 436, 826, 1075, 1144, 1318, 1600, 1957
Tsp45I	GTSAC	3 cut(s)	251, 370, 891
TspGWI	ACGGA	1 cut(s)	146
TspRI	CASTG	6 cut(s)	52, 210, 934, 1096, 1410, 1798
Tth111I	GACNNNGTC	1 cut(s)	1740
Van91I	CCANNNNNTGG	1 cut(s)	1617
VneI	GTGCAC	1 cut(s)	1941
VpaK11BI	GGWCC	2 cut(s)	313, 1973
XapI	RAATTY	4 cut(s)	726, 1429, 1621, 1747
XceI	RCATGY	3 cut(s)	265, 443, 1810
XhoI	CTCGAG	1 cut(s)	290
XmaJI	CCTAGG	1 cut(s)	1295
XmnI	GAANNNNTTC	1 cut(s)	1034
XspI	CTAG	6 cut(s)	698, 759, 774, 920, 1296, 1818
ZraI	GACGTC	1 cut(s)	256
Zsp2I	ATGCAT	1 cut(s)	1891

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.