Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0005479

Physical Location & Seq

Genomic Coordinates Reverse (-)

12890367 .. 12894414

Gene Structure 4048 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1159400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2022 bp

ATGCATCTGAGCAACGGCATGGGCTCGATGTCAACGGCTAGTTCGAGTGGAGCTTGGAAATCGGGGGATGTGGTCACTGACCAGTTTCCTGCGGGACTAAGAGTCCTTGTGGTCGACGATGATCCTACTTGCCTTATGATCTTGGAGAGGATGCTCAGAACTTGCCTCTATGAAGTGACAAAATGTAATCGTGCGGAGATCGCACTTTCGTTGCTTCGAGAGAACAAGAACGGATTCGATATTGTTATCAGTGATGTGCACATGCCAGACATGGATGGATTCAAACTCCTAGAGCAAGTTGGACTGGAGATGGACCTGCCTGTTATCATGATGTCTGCTGATGATGGACAAAGTGTTGTTATGAAGGGTGTGACTCATGGTGCTTGTGATTACCTAATCAAACCGGTTCGCATTGAGGCGCTGAAGAACATATGGCAGCATGTAGTGCGGAAGAAAAAGAATGAATGGAAGGATGTGGAGCAATCTGGAAGTGTGGAAGAAGGAGATCGGCAGCAGAAACCATCCGAAGATGCAGATTACTCGTCCTCGGCAAATGAAGGGACTTGGAAGAACTCAAAGAGGAGGAAGGATGAGGAAGAAGAGACGGATGAGAGGGATGATTCATCCACATTAAAGAAGCCGCGGGTCGTTTGGTCAGTTGAACTTCATCAACAGTTTGTGGGCGCTGTCAATCAACTAGGCATTGATAAGGCTGTTCCTAAGAAAATTTTGGAGTTGATGAATGTTCCTGGGCTTACTAGAGAAAATGTTGCCAGCCATCTTCAGAAATACAGACTGTACCTTAGAAGGTTAAGTGGGGTGTCTCAGCACCAGAATAATTTGAGCAACTCTTTCATGAGTCCTCAAGAAGCATCGTTCGGAGCAATGTCATCGCTCAGTGGGCTGGATCTTCAGACGCTAGCTGTCACAGGTCAACTCCCTGCTCAAAGCCTTGCCACACTCCAAGCAGCCGGACTTGGGAGGTCAACGACAAAATCAGGCGTACCTATGCCTCTTGTTGATCAAAGGAACTTATTCAGCTTTGAAAATCCAAAGTTGAGGTTTGCGGAGGGGCAACATCATCTGAGCAGTAGCAAACCGATGAACTTACTTCATGGGATTCCAACAACTATGGAGGCAAAACAGCTTGCCAACTTGCACCAGTCTGCACAATCTCTTGGGGCTGTCAATATGCAAGTCAATGCTCATGGAGTCCAGAACAGTTCTCTACTTATGCCGGTAGCTCAATCGCAGCCAAGAGGGCAGATCTTGAACGAAACTTCTGGAAATCATGTTCCACGGCTCTCATCATCAATGGGGCATCCCATCATGTCTAATGGTATGAGTAGTGGAGTTTCGGGAAGAAATGGAATTGTTGATAGCGGCAGAGGCGGAGGATATAATCCAATGCAACAAAACTCGTCAATGGTGAATTATCCCCTGAACAACAGTTCACAACTACCATGCAACAGTTTTACTCTTGGAAGTACACCAGTAATGTCCAGCCTCACGTCTAAAGGAGCATTTCCAGAAGATGTAAATTCTGATGTAAAAATATCTTCTGGATTTATGCCAAGTTATGATATGTTTAACGAGTTACAGCAGCTCAAATCAAATGATTGGGACTTGCAGAATGTGGGATTGACTTTTGACCCCTCTCAACATACAAACTCCATGCACAATAGCCTTGAGCCGTCAGTTATAGTTCATCAAGGATTTTCTTCTAGCCAAAGAGGTGGACAAAGCGGGAGTGTTGGAAAAGCTCTGTTCTCAATGGACGAAGGCAGTCATCTTGGGAATGTGCAAAATACCAGTCAACGTCTTAACGGTCTTGTTGTTGACAATACAGTTAGGATTAAAGCTGAAAGTGCGGCCGATGCAACTTCTCAAACTAGCTTCTTTCATGAACAATATGGTCAGGATGATCTAATGAGCGCACTTCTCAAACAGCAAGATGGACTTGGACCCGCTGAAAATGAGTTTGACTTTGATGGGTATTCCTTGGATAATATTCCTGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000156 GO:0000160 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0009653 GO:0009719 GO:0009723 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009873 GO:0009888 GO:0009889 GO:0009987 GO:0010015 GO:0010033 GO:0010073 GO:0010075 GO:0010082 GO:0010119 GO:0010150 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022622 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0035556 GO:0040008 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048638 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0051716 GO:0060089 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071369 GO:0071495 GO:0080050 GO:0080090 GO:0080113 GO:0090693 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:2000026 GO:2000112 GO:2000241 GO:2000280 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Myb_DNA-binding Response_reg

Protein Analysis

674

Amino Acids

73.43

Weight (kDa)

5.58

Isoelectric Point (pI)

48.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Response_reg	PF00072	35 - 143	1.6e-22	Response regulator receiver domain
Myb_DNA-binding	PF00249	215 - 265	7.5e-08	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005479)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16857 AT3G16857 AT3G16857
fragaria_vesca	FvH4_4g19230 FvH4_4g19230
malus_domestica	MD13G1159700.v1.1 MD16G1159400.v1.1
prunus_persica	Prupe.1G126400_v2.0.a1 Prupe.1G126400_v2.0.a1
pyrus_communis	pycom13g13610 pycom16g13440
rosa_chinensis	RchiOBHm_Chr4g0424211
rosa_laevigata	RLG00000007496
rosa_multiflora	Rmu_co8430763.1_g000001 Rmu_sc0002260.1_g000035 Rmu_sc0019001.1_g000002 Rmu_sc0028069.1_g000001 Rmu_sc0028070.1_g000001
rosa_roxburghii	Rroxscaffold_5G00366160
rosa_rugosa	Rorug04G0193900 Rorug04G0194000 Rorug04G0194100 Rorug04G0194200 Rorug04G0194300
rosa_samantha	Rh4AG251700 Rh4BG257000 Rh4CG267600 Rh4DG251400
rosa_wichuraiana	Rw4G021700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	324
AccI	GTMKAC	1 cut(s)	114
AccII	CGCG	1 cut(s)	643
AclWI	GGATC	2 cut(s)	116, 915
AcoI	YGGCCR	1 cut(s)	1872
AcsI	RAATTY	2 cut(s)	726, 1540
AcuI	CTGAAG	3 cut(s)	443, 767, 896
AfaI	GTAC	3 cut(s)	800, 1005, 1489
AfiI	CCNNNNNNNGG	1 cut(s)	978
AgeI	ACCGGT	1 cut(s)	403
AgsI	TTSAA	4 cut(s)	283, 662, 1046, 1273
AhdI	GACNNNNNGTC	1 cut(s)	101
AjiI	CACGTC	1 cut(s)	1512
AjnI	CCWGG	1 cut(s)	748
AloI	GAACNNNNNNTCC	2 cut(s)	1278, 1310
AluBI	AGCT	9 cut(s)	53, 923, 1041, 1147, 1244, 1606, 1763, 1862, 1896
AluI	AGCT	9 cut(s)	53, 923, 1041, 1147, 1244, 1606, 1763, 1862, 1896
Alw21I	GWGCWC	1 cut(s)	261
Alw26I	GTCTC	2 cut(s)	596, 828
Alw44I	GTGCAC	1 cut(s)	257
AlwI	GGATC	2 cut(s)	116, 915
AoxI	GGCC	1 cut(s)	1872
ApaLI	GTGCAC	1 cut(s)	257
ApeKI	GCWGC	5 cut(s)	436, 511, 968, 1252, 1603
ApoI	RAATTY	2 cut(s)	726, 1540
ArsI	GACNNNNNNTTYG	2 cut(s)	1798, 1830
AsiGI	ACCGGT	1 cut(s)	403
Asp700I	GAANNNNTTC	2 cut(s)	233, 1034
AspLEI	GCGC	3 cut(s)	421, 686, 1937
AspS9I	GGNCC	2 cut(s)	313, 1964
AsuHPI	GGTGA	1 cut(s)	1441
AsuNHI	GCTAGC	1 cut(s)	919
AvaII	GGWCC	2 cut(s)	313, 1964
BaeGI	GKGCMC	1 cut(s)	261
BanII	GRGCYC	1 cut(s)	26
Bbv12I	GWGCWC	1 cut(s)	261
BbvI	GCAGC	5 cut(s)	448, 523, 980, 1264, 1615
BccI	CCATC	8 cut(s)	269, 304, 338, 529, 786, 1334, 1949, 1985
BceAI	ACGGC	4 cut(s)	31, 51, 1316, 1678
BcgI	CGANNNNNNTGC	4 cut(s)	522, 556, 873, 907
BciT130I	CCWGG	1 cut(s)	750
BclI	TGATCA	1 cut(s)	1021
BcoDI	GTCTC	2 cut(s)	596, 828
BfaI	CTAG	7 cut(s)	39, 290, 698, 759, 920, 1725, 1893
BfoI	RGCGCY	2 cut(s)	422, 687
BfuAI	ACCTGC	1 cut(s)	324
BglI	GCCNNNNNGGC	1 cut(s)	1261
BglII	AGATCT	1 cut(s)	1266
BisI	GCNGC	8 cut(s)	437, 512, 641, 969, 1253, 1384, 1604, 1872
BlsI	GCNGC	8 cut(s)	438, 513, 642, 970, 1254, 1385, 1605, 1873
Bme1390I	CCNGG	1 cut(s)	750
Bme18I	GGWCC	2 cut(s)	313, 1964
BmeRI	GACNNNNNGTC	1 cut(s)	101
BmgBI	CACGTC	1 cut(s)	1512
BmgT120I	GGNCC	2 cut(s)	313, 1964
BmiI	GGNNCC	1 cut(s)	1966
BmrFI	CCNGG	1 cut(s)	750
BmsI	GCATC	6 cut(s)	13, 141, 520, 881, 1330, 1867
BmtI	GCTAGC	1 cut(s)	923
BpmI	CTGGAG	1 cut(s)	326
BpuEI	CTTGAG	2 cut(s)	849, 1709
BsaJI	CCNNGG	5 cut(s)	546, 641, 749, 1298, 2001
BsaWI	WCCGGW	1 cut(s)	403
Bsc4I	CCNNNNNNNGG	1 cut(s)	978
Bse118I	RCCGGY	2 cut(s)	403, 1237
Bse1I	ACTGG	5 cut(s)	82, 309, 1162, 1493, 1812
Bse3DI	GCAATG	1 cut(s)	891
BseBI	CCWGG	1 cut(s)	750
BseDI	CCNNGG	5 cut(s)	546, 641, 749, 1298, 2001
BseLI	CCNNNNNNNGG	1 cut(s)	978
BseMI	GCAATG	1 cut(s)	891
BseMII	CTCAG	4 cut(s)	169, 839, 910, 1076
BseNI	ACTGG	5 cut(s)	82, 309, 1162, 1493, 1812
BseRI	GAGGAG	1 cut(s)	595
BseSI	GKGCMC	1 cut(s)	261
BseX3I	CGGCCG	1 cut(s)	1872
BseXI	GCAGC	5 cut(s)	448, 523, 980, 1264, 1615
BsgI	GTGCAG	1 cut(s)	1152
Bsh1236I	CGCG	1 cut(s)	643
Bsh1285I	CGRYCG	1 cut(s)	1875
BshFI	GGCC	1 cut(s)	1874
BshTI	ACCGGT	1 cut(s)	403
BsiEI	CGRYCG	1 cut(s)	1875
BsiHKAI	GWGCWC	1 cut(s)	261
BsiSI	CCGG	3 cut(s)	404, 972, 1238
BslFI	GGGAC	3 cut(s)	108, 574, 1637
BslI	CCNNNNNNNGG	1 cut(s)	978
BsmAI	GTCTC	2 cut(s)	596, 828
BsmBI	CGTCTC	1 cut(s)	596
BsmFI	GGGAC	3 cut(s)	108, 574, 1637
BsnI	GGCC	1 cut(s)	1874
Bsp1286I	GDGCHC	2 cut(s)	26, 261
Bsp143I	GATC	8 cut(s)	121, 138, 198, 505, 907, 1021, 1266, 1924
BspANI	GGCC	1 cut(s)	1874
BspCNI	CTCAG	4 cut(s)	168, 838, 909, 1077
BspFNI	CGCG	1 cut(s)	643
BspHI	TCATGA	3 cut(s)	327, 855, 1903
BspLI	GGNNCC	1 cut(s)	1966
BspMI	ACCTGC	1 cut(s)	324
BspOI	GCTAGC	1 cut(s)	923
BspPI	GGATC	2 cut(s)	116, 915
BsrDI	GCAATG	1 cut(s)	891
BsrFI	RCCGGY	2 cut(s)	403, 1237
BsrI	ACTGG	5 cut(s)	82, 309, 1162, 1493, 1812
BssAI	RCCGGY	2 cut(s)	403, 1237
BssECI	CCNNGG	5 cut(s)	546, 641, 749, 1298, 2001
BssMI	GATC	8 cut(s)	121, 138, 198, 505, 907, 1021, 1266, 1924
BssT1I	CCWWGG	1 cut(s)	2001
Bst2UI	CCWGG	1 cut(s)	750
Bst4CI	ACNGT	7 cut(s)	675, 798, 1223, 1451, 1472, 1829, 1849
Bst6I	CTCTTC	1 cut(s)	594
BstAPI	GCANNNNNTGC	1 cut(s)	445
BstC8I	GCNNGC	3 cut(s)	775, 921, 1149
BstDEI	CTNAG	8 cut(s)	8, 98, 155, 720, 803, 825, 896, 1085
BstDSI	CCRYGG	2 cut(s)	641, 1298
BstFNI	CGCG	1 cut(s)	643
BstH2I	RGCGCY	2 cut(s)	422, 687
BstHHI	GCGC	3 cut(s)	421, 686, 1937
BstKTI	GATC	8 cut(s)	124, 141, 201, 508, 910, 1024, 1269, 1927
BstMAI	GTCTC	2 cut(s)	596, 828
BstMBI	GATC	8 cut(s)	121, 138, 198, 505, 907, 1021, 1266, 1924
BstMCI	CGRYCG	1 cut(s)	1875
BstMWI	GCNNNNNNNGC	7 cut(s)	200, 445, 901, 1261, 1389, 1868, 1877
BstNI	CCWGG	1 cut(s)	750
BstNSI	RCATGY	2 cut(s)	265, 443
BstSCI	CCNGG	1 cut(s)	748
BstSLI	GKGCMC	1 cut(s)	261
BstUI	CGCG	1 cut(s)	643
BstV1I	GCAGC	5 cut(s)	448, 523, 980, 1264, 1615
BstX2I	RGATCY	2 cut(s)	907, 1266
BstXI	CCANNNNNNTGG	1 cut(s)	1736
BstYI	RGATCY	2 cut(s)	907, 1266
BstZI	CGGCCG	1 cut(s)	1872
BsuRI	GGCC	1 cut(s)	1874
BtgI	CCRYGG	2 cut(s)	641, 1298
BtgZI	GCGATG	1 cut(s)	876
BtrI	CACGTC	1 cut(s)	1512
BtsIMutI	CAGTG	3 cut(s)	75, 256, 904
BveI	ACCTGC	1 cut(s)	324
Cac8I	GCNNGC	3 cut(s)	775, 921, 1149
CciI	TCATGA	3 cut(s)	327, 855, 1903
CfoI	GCGC	3 cut(s)	421, 686, 1937
Cfr10I	RCCGGY	2 cut(s)	403, 1237
Cfr13I	GGNCC	2 cut(s)	313, 1964
Cfr42I	CCGCGG	1 cut(s)	644
CseI	GACGC	1 cut(s)	925
Csp6I	GTAC	3 cut(s)	799, 1004, 1488
CspAI	ACCGGT	1 cut(s)	403
CviQI	GTAC	3 cut(s)	799, 1004, 1488
DdeI	CTNAG	8 cut(s)	8, 98, 155, 720, 803, 825, 896, 1085
DpnI	GATC	8 cut(s)	123, 140, 200, 507, 909, 1023, 1268, 1926
DpnII	GATC	8 cut(s)	121, 138, 198, 505, 907, 1021, 1266, 1924
DriI	GACNNNNNGTC	1 cut(s)	101
EaeI	YGGCCR	1 cut(s)	1872
EagI	CGGCCG	1 cut(s)	1872
Eam1104I	CTCTTC	1 cut(s)	594
Eam1105I	GACNNNNNGTC	1 cut(s)	101
EarI	CTCTTC	1 cut(s)	594
EciI	GGCGGA	1 cut(s)	1407
EclXI	CGGCCG	1 cut(s)	1872
Eco130I	CCWWGG	1 cut(s)	2001
Eco24I	GRGCYC	1 cut(s)	26
Eco47I	GGWCC	2 cut(s)	313, 1964
Eco52I	CGGCCG	1 cut(s)	1872
Eco57I	CTGAAG	3 cut(s)	443, 767, 896
EcoRII	CCWGG	1 cut(s)	748
EcoT14I	CCWWGG	1 cut(s)	2001
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	1 cut(s)	26
ErhI	CCWWGG	1 cut(s)	2001
Esp3I	CGTCTC	1 cut(s)	596
FalI	AAGNNNNNCTT	2 cut(s)	1944, 1976
FaqI	GGGAC	3 cut(s)	108, 574, 1637
FauI	CCCGC	4 cut(s)	85, 636, 1739, 1975
FauNDI	CATATG	1 cut(s)	431
FbaI	TGATCA	1 cut(s)	1021
FblI	GTMKAC	1 cut(s)	114
Fnu4HI	GCNGC	8 cut(s)	437, 512, 641, 969, 1253, 1384, 1604, 1872
FriOI	GRGCYC	1 cut(s)	26
Fsp4HI	GCNGC	8 cut(s)	437, 512, 641, 969, 1253, 1384, 1604, 1872
FspBI	CTAG	7 cut(s)	39, 290, 698, 759, 920, 1725, 1893
GlaI	GCGC	3 cut(s)	420, 685, 1936
GluI	GCNGC	8 cut(s)	437, 512, 641, 969, 1253, 1384, 1604, 1872
GsuI	CTGGAG	1 cut(s)	326
HaeII	RGCGCY	2 cut(s)	422, 687
HaeIII	GGCC	1 cut(s)	1874
HapII	CCGG	3 cut(s)	404, 972, 1238
HgaI	GACGC	1 cut(s)	925
HhaI	GCGC	3 cut(s)	421, 686, 1937
Hin6I	GCGC	3 cut(s)	419, 684, 1935
HinP1I	GCGC	3 cut(s)	419, 684, 1935
HincII	GTYRAC	6 cut(s)	33, 115, 935, 987, 1817, 1840
HindII	GTYRAC	6 cut(s)	33, 115, 935, 987, 1817, 1840
HinfI	GANTC	8 cut(s)	102, 234, 279, 373, 620, 859, 1120, 1212
HpaII	CCGG	3 cut(s)	404, 972, 1238
HphI	GGTGA	1 cut(s)	1441
Hpy188I	TCNGA	8 cut(s)	9, 158, 526, 786, 881, 915, 1086, 1546
Hpy99I	CGWCG	1 cut(s)	119
HpyAV	CCTTC	7 cut(s)	358, 463, 494, 551, 580, 801, 1775
HpyCH4III	ACNGT	7 cut(s)	675, 798, 1223, 1451, 1472, 1829, 1849
HpyCH4IV	ACGT	2 cut(s)	1511, 1819
HpyF10VI	GCNNNNNNNGC	7 cut(s)	200, 445, 901, 1261, 1389, 1868, 1877
HpyF3I	CTNAG	8 cut(s)	8, 98, 155, 720, 803, 825, 896, 1085
HpySE526I	ACGT	2 cut(s)	1511, 1819
HspAI	GCGC	3 cut(s)	419, 684, 1935
Ksp22I	TGATCA	1 cut(s)	1021
KspI	CCGCGG	1 cut(s)	644
Kzo9I	GATC	8 cut(s)	121, 138, 198, 505, 907, 1021, 1266, 1924
LmnI	GCTCC	4 cut(s)	50, 478, 881, 1520
Lsp1109I	GCAGC	5 cut(s)	448, 523, 980, 1264, 1615
LweI	GCATC	6 cut(s)	13, 141, 520, 881, 1330, 1867
MaeI	CTAG	7 cut(s)	39, 290, 698, 759, 920, 1725, 1893
MaeII	ACGT	2 cut(s)	1511, 1819
MaeIII	GTNAC	5 cut(s)	73, 175, 370, 925, 1596
MalI	GATC	8 cut(s)	123, 140, 200, 507, 909, 1023, 1268, 1926
MboI	GATC	8 cut(s)	121, 138, 198, 505, 907, 1021, 1266, 1924
MflI	RGATCY	2 cut(s)	907, 1266
MhlI	GDGCHC	2 cut(s)	26, 261
MluCI	AATT	5 cut(s)	726, 838, 1371, 1432, 1540
MlyI	GAGTC	4 cut(s)	111, 367, 868, 1221
MmeI	TCCRAC	3 cut(s)	280, 1148, 1735
Mph1103I	ATGCAT	1 cut(s)	6
MroXI	GAANNNNTTC	2 cut(s)	233, 1034
MseI	TTAA	5 cut(s)	632, 812, 1590, 1824, 1857
MspA1I	CMGCKG	2 cut(s)	643, 1970
MspI	CCGG	3 cut(s)	404, 972, 1238
MspR9I	CCNGG	1 cut(s)	750
MvaI	CCWGG	1 cut(s)	750
MvnI	CGCG	1 cut(s)	643
MwoI	GCNNNNNNNGC	7 cut(s)	200, 445, 901, 1261, 1389, 1868, 1877
NdeI	CATATG	1 cut(s)	431
NdeII	GATC	8 cut(s)	121, 138, 198, 505, 907, 1021, 1266, 1924
NheI	GCTAGC	1 cut(s)	919
NlaIV	GGNNCC	1 cut(s)	1966
NmeAIII	GCCGAG	1 cut(s)	527
NmuCI	GTSAC	4 cut(s)	73, 175, 370, 925
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	2 cut(s)	265, 443
PagI	TCATGA	3 cut(s)	327, 855, 1903
PcsI	WCGNNNNNNNCGW	1 cut(s)	41
PdmI	GAANNNNTTC	2 cut(s)	233, 1034
PfeI	GAWTC	4 cut(s)	234, 279, 620, 1120
PinAI	ACCGGT	1 cut(s)	403
PkrI	GCNGC	8 cut(s)	438, 513, 642, 970, 1254, 1385, 1605, 1873
PleI	GAGTC	4 cut(s)	110, 367, 867, 1220
PpsI	GAGTC	4 cut(s)	110, 367, 867, 1220
Psp6I	CCWGG	1 cut(s)	748
PspGI	CCWGG	1 cut(s)	748
PspN4I	GGNNCC	1 cut(s)	1966
PspPI	GGNCC	2 cut(s)	313, 1964
PsuI	RGATCY	2 cut(s)	907, 1266
RsaI	GTAC	3 cut(s)	800, 1005, 1489
RsaNI	GTAC	3 cut(s)	799, 1004, 1488
SacII	CCGCGG	1 cut(s)	644
SalI	GTCGAC	1 cut(s)	113
SaqAI	TTAA	5 cut(s)	632, 812, 1590, 1824, 1857
SatI	GCNGC	8 cut(s)	437, 512, 641, 969, 1253, 1384, 1604, 1872
Sau3AI	GATC	8 cut(s)	121, 138, 198, 505, 907, 1021, 1266, 1924
Sau96I	GGNCC	2 cut(s)	313, 1964
SchI	GAGTC	4 cut(s)	111, 367, 868, 1221
ScrFI	CCNGG	1 cut(s)	750
SduI	GDGCHC	2 cut(s)	26, 261
SfaNI	GCATC	6 cut(s)	13, 141, 520, 881, 1330, 1867
Sfr303I	CCGCGG	1 cut(s)	644
SgrBI	CCGCGG	1 cut(s)	644
SinI	GGWCC	2 cut(s)	313, 1964
SmlI	CTYRAG	2 cut(s)	864, 1688
SmoI	CTYRAG	2 cut(s)	864, 1688
Sse9I	AATT	5 cut(s)	726, 838, 1371, 1432, 1540
SspI	AATATT	1 cut(s)	2011
SspMI	CTAG	7 cut(s)	39, 290, 698, 759, 920, 1725, 1893
StyD4I	CCNGG	1 cut(s)	748
StyI	CCWWGG	1 cut(s)	2001
TaaI	ACNGT	7 cut(s)	675, 798, 1223, 1451, 1472, 1829, 1849
TaiI	ACGT	2 cut(s)	1514, 1822
TaqI	TCGA	5 cut(s)	26, 44, 114, 217, 237
TasI	AATT	5 cut(s)	726, 838, 1371, 1432, 1540
TatI	WGTACW	1 cut(s)	1487
TauI	GCSGC	3 cut(s)	643, 1386, 1874
TfiI	GAWTC	4 cut(s)	234, 279, 620, 1120
Tru1I	TTAA	5 cut(s)	632, 812, 1590, 1824, 1857
Tru9I	TTAA	5 cut(s)	632, 812, 1590, 1824, 1857
TscAI	CASTG	3 cut(s)	82, 256, 904
TseFI	GTSAC	4 cut(s)	73, 175, 370, 925
TseI	GCWGC	5 cut(s)	436, 511, 968, 1252, 1603
Tsp45I	GTSAC	4 cut(s)	73, 175, 370, 925
TspGWI	ACGGA	2 cut(s)	246, 620
TspRI	CASTG	3 cut(s)	82, 256, 904
VneI	GTGCAC	1 cut(s)	257
VpaK11BI	GGWCC	2 cut(s)	313, 1964
XapI	RAATTY	2 cut(s)	726, 1540
XceI	RCATGY	2 cut(s)	265, 443
XmiI	GTMKAC	1 cut(s)	114
XmnI	GAANNNNTTC	2 cut(s)	233, 1034
XspI	CTAG	7 cut(s)	39, 290, 698, 759, 920, 1725, 1893
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.