Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0005479

Physical Location & Seq

Genomic Coordinates Reverse (-)

12567112 .. 12571259

Gene Structure 4148 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1159700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1929 bp

ATGCATCTGAGCAACGGCATGGGATTGATGTCAACGGCTAGTTCGAGTGGAACTTGGAAATCGGGGGATGTGGTCTCTGACCAGTTTCCCGCGGGACTAAGAGTCCTGGTGGTCGACGATGATCCTACTTGCCTTATGATCTTGGAGAGGATGCTCAGAACTTGCCTCTATGAAGTGACAAAATGTAATCGAGCGGAGAGCGCGCTTTCGCTGCTTCGAGAGAACAAGAACGGATACGATGTTGTTATCAGTGATGTGCACATGCCAGACATGGATGGATTCAAACTCCTAGAGCAGGTTGGACTGGAGATGGACCTGCCTGTTATCATGATGTCCGCTGATGATGGAAAAAGTGTTGTCATGAAGGGTGTGACTCATGGTGCTTGTGATTATCTGATCAAACCAGTTCGCATTGAGGCGCTGAAGAACATATGGCAGCATGTGGTTCGGAAGAAAAAGAATGAGCGGAAGGATGCGGAGCAATCCGGAAGTGTGGAAGAAGGGGATCGGCAGCAAAAACCATCCGAAGATGCAGATTACTCGTCCTCGGCAAATGAAGGGTCTTGGAAGAACTCAAAGAGGAGGAAGGATGAGGAAGAAGAGACGGATGAGAGGGATGATTCATCCACATTAAAGAAGCCGCGGGTTGTTTGGTCAGTCGAACTCCATCAACAATTTGTGGGCGCTGTTAATCAACTAGGCATTGACAAGGCCGTGCCTAAGAAAATTCTGGAGTTGATGAATGTTCCTGGGCTTACTAGAGAAAATGTTGCTAGCCATCTTCAGAAATACAGGCTGTACCTTAGAAGGTTGAGTGGGGTGTCTCAGCACCAGAATAATTTGAGCAACCCTTTCATGAGTCCTCAAGAAGCGTCTTTTGGAGCAATGTCATCACTCAATGGGCTCGATCTTCAGACGCTAGCTGTCACAGGTCAACTCCCTGCTCAAAGCCTTGCCACACTCCAAGCAGCCGGACTTGGGAGGTCAACAGGAAAATCTGGCATACCTATGCCCCTTGTTGATCAAAGGAACTTATTCAGCTTTGAAAATCCAAAGCAACAACATATGAGCAGTAGCAAACCGATGAACTTACTTAATGGAATTCCAACAACTATGGAGGCAAAACAGCTTGCCAACTTGCACCAGTCTGCACAAACCCTTGGAGCTGCCAATATGCAAGTCAATGCTCATGGAGTTCAGAACAGTTCTCTACTTATGCCGCTACCTCAATTGCAGCCAAGGGGGCAGATCTTGAATGAATCTTCTGGAAATCATGTTCCACGGCATTCATCATCAGTGGGGCAGCCCATCATATCTAATGGTATGGGTAATGGAGTTTTGGGAAGAAATGGTATTGTTGATAGCGGCAGAGGCGTAGGATATAATCCAGTGCATCAAAACTCCTCAATGTTGAATTATCCCCTAAACAACAGTTCACAACTACCAGGCAACAATTTTACCCTTGGAAGTACACCGGTAATGTCCAGCCTTGCGTCTAAAGGAGCATTTCCTGAAGACGTGACTTCTGACATAAAAAGATCTTCTGGATTTATGCCAAGTTATGATATGTTTAACGAGTTACAGCAGCCCAAGTCAAATGAGTGGGACTTGCAGAATGTGGGCTTGACTTTCGATGTGTCACAACATACACACTCCATACACGGTAGCCTTGATCCCTCGGTTTTAGTTCATCAAGGATTTTCTTCTAGTCAAAGGGGTGGACAAAGCAGGAATCCATCTATTGTTGGAAAAACTATGTTCTCAGTGGGGGAAGGCAGTCATTTTGGGAATATGCAAAATACTGGTCACCACCTTAACGGTCGTATTGTTGACAATACAGTTAGGATTAAGGCTGAAACAGATGGACTTGGACCTGCCGAAAATGAGTTTGACTTTGATGGGTATTCCTTGGATAATATTCCTGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000156 GO:0000160 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0009653 GO:0009719 GO:0009723 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009873 GO:0009888 GO:0009889 GO:0009987 GO:0010015 GO:0010033 GO:0010073 GO:0010075 GO:0010082 GO:0010119 GO:0010150 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022622 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0035556 GO:0040008 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048638 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0051716 GO:0060089 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071369 GO:0071495 GO:0080050 GO:0080090 GO:0080113 GO:0090693 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:2000026 GO:2000112 GO:2000241 GO:2000280 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Myb_DNA-binding Response_reg

Protein Analysis

643

Amino Acids

70.04

Weight (kDa)

6.14

Isoelectric Point (pI)

45.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Response_reg	PF00072	35 - 143	2.4e-23	Response regulator receiver domain
Myb_DNA-binding	PF00249	215 - 265	7.1e-08	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0005479)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16857 AT3G16857 AT3G16857
fragaria_vesca	FvH4_4g19230 FvH4_4g19230
malus_domestica	MD13G1159700.v1.1 MD16G1159400.v1.1
prunus_persica	Prupe.1G126400_v2.0.a1 Prupe.1G126400_v2.0.a1
pyrus_communis	pycom13g13610 pycom16g13440
rosa_chinensis	RchiOBHm_Chr4g0424211
rosa_laevigata	RLG00000007496
rosa_multiflora	Rmu_co8430763.1_g000001 Rmu_sc0002260.1_g000035 Rmu_sc0019001.1_g000002 Rmu_sc0028069.1_g000001 Rmu_sc0028070.1_g000001
rosa_roxburghii	Rroxscaffold_5G00366160
rosa_rugosa	Rorug04G0193900 Rorug04G0194000 Rorug04G0194100 Rorug04G0194200 Rorug04G0194300
rosa_samantha	Rh4AG251700 Rh4BG257000 Rh4CG267600 Rh4DG251400
rosa_wichuraiana	Rw4G021700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	286, 324, 1882
AccBSI	CCGCTC	2 cut(s)	194, 466
AccI	GTMKAC	1 cut(s)	114
AccII	CGCG	3 cut(s)	92, 203, 643
AccIII	TCCGGA	1 cut(s)	485
AclWI	GGATC	3 cut(s)	116, 513, 1667
AcsI	RAATTY	2 cut(s)	726, 1101
AcuI	CTGAAG	4 cut(s)	443, 767, 896, 1533
AfaI	GTAC	2 cut(s)	800, 1471
AfiI	CCNNNNNNNGG	2 cut(s)	295, 978
AgeI	ACCGGT	1 cut(s)	1474
AgsI	TTSAA	4 cut(s)	283, 1046, 1255, 1414
AhdI	GACNNNNNGTC	1 cut(s)	101
AjiI	CACGTC	1 cut(s)	1519
AjnI	CCWGG	3 cut(s)	105, 748, 1444
AjuI	GAANNNNNNNTTGG	2 cut(s)	861, 893
AloI	GAACNNNNNNTCC	2 cut(s)	1260, 1292
AluBI	AGCT	4 cut(s)	923, 1041, 1129, 1166
AluI	AGCT	4 cut(s)	923, 1041, 1129, 1166
Alw21I	GWGCWC	1 cut(s)	261
Alw26I	GTCTC	3 cut(s)	79, 596, 828
Alw44I	GTGCAC	1 cut(s)	257
AlwI	GGATC	3 cut(s)	116, 513, 1667
Aor13HI	TCCGGA	1 cut(s)	485
AoxI	GGCC	1 cut(s)	711
ApaLI	GTGCAC	1 cut(s)	257
ApeKI	GCWGC	8 cut(s)	211, 436, 511, 968, 1166, 1234, 1303, 1585
ApoI	RAATTY	2 cut(s)	726, 1101
ArsI	GACNNNNNNTTYG	4 cut(s)	545, 577, 1789, 1821
AsiGI	ACCGGT	1 cut(s)	1474
Asp700I	GAANNNNTTC	1 cut(s)	1034
AspLEI	GCGC	4 cut(s)	203, 205, 421, 686
AspS9I	GGNCC	2 cut(s)	313, 1871
AsuHPI	GGTGA	1 cut(s)	1799
AsuNHI	GCTAGC	2 cut(s)	773, 919
AvaII	GGWCC	2 cut(s)	313, 1871
BaeGI	GKGCMC	1 cut(s)	261
BanII	GRGCYC	1 cut(s)	906
BbsI	GAAGAC	1 cut(s)	1521
Bbv12I	GWGCWC	1 cut(s)	261
BbvI	GCAGC	8 cut(s)	198, 448, 523, 980, 1153, 1246, 1315, 1597
BceAI	ACGGC	4 cut(s)	31, 51, 698, 1298
BcgI	CGANNNNNNTGC	4 cut(s)	428, 462, 522, 556
BciT130I	CCWGG	3 cut(s)	107, 750, 1446
BciVI	GTATCC	1 cut(s)	227
BclI	TGATCA	2 cut(s)	396, 1021
BcoDI	GTCTC	3 cut(s)	79, 596, 828
BfaI	CTAG	7 cut(s)	39, 290, 698, 759, 774, 920, 1707
BfoI	RGCGCY	2 cut(s)	422, 687
BfuAI	ACCTGC	3 cut(s)	286, 324, 1882
BfuI	GTATCC	1 cut(s)	227
BglI	GCCNNNNNGGC	1 cut(s)	1243
BglII	AGATCT	2 cut(s)	1248, 1538
Bme1390I	CCNGG	3 cut(s)	107, 750, 1446
Bme18I	GGWCC	2 cut(s)	313, 1871
BmeRI	GACNNNNNGTC	1 cut(s)	101
BmgBI	CACGTC	1 cut(s)	1519
BmgT120I	GGNCC	2 cut(s)	313, 1871
BmrFI	CCNGG	3 cut(s)	107, 750, 1446
BmsI	GCATC	5 cut(s)	13, 141, 463, 520, 1402
BmtI	GCTAGC	2 cut(s)	777, 923
BpiI	GAAGAC	1 cut(s)	1521
BpmI	CTGGAG	2 cut(s)	326, 752
BpuEI	CTTGAG	1 cut(s)	849
BsaI	GGTCTC	1 cut(s)	79
BsaWI	WCCGGW	2 cut(s)	485, 1474
Bsc4I	CCNNNNNNNGG	2 cut(s)	295, 978
Bse118I	RCCGGY	1 cut(s)	1474
Bse1I	ACTGG	6 cut(s)	82, 309, 404, 1144, 1388, 1807
Bse3DI	GCAATG	1 cut(s)	891
BseAI	TCCGGA	1 cut(s)	485
BseBI	CCWGG	3 cut(s)	107, 750, 1446
BseGI	GGATG	9 cut(s)	73, 156, 280, 478, 521, 595, 613, 622, 623
BseLI	CCNNNNNNNGG	2 cut(s)	295, 978
BseMI	GCAATG	1 cut(s)	891
BseMII	CTCAG	3 cut(s)	169, 839, 1776
BseNI	ACTGG	6 cut(s)	82, 309, 404, 1144, 1388, 1807
BsePI	GCGCGC	1 cut(s)	201
BseRI	GAGGAG	2 cut(s)	595, 1393
BseSI	GKGCMC	1 cut(s)	261
BseXI	GCAGC	8 cut(s)	198, 448, 523, 980, 1153, 1246, 1315, 1597
BsgI	GTGCAG	1 cut(s)	1134
Bsh1236I	CGCG	3 cut(s)	92, 203, 643
Bsh1285I	CGRYCG	1 cut(s)	1822
BshFI	GGCC	1 cut(s)	713
BshTI	ACCGGT	1 cut(s)	1474
BsiEI	CGRYCG	1 cut(s)	1822
BsiHKAI	GWGCWC	1 cut(s)	261
BsiSI	CCGG	3 cut(s)	486, 972, 1475
BslFI	GGGAC	2 cut(s)	108, 1619
BslI	CCNNNNNNNGG	2 cut(s)	295, 978
BsmAI	GTCTC	3 cut(s)	79, 596, 828
BsmBI	CGTCTC	1 cut(s)	596
BsmFI	GGGAC	2 cut(s)	108, 1619
BsmI	GAATGC	1 cut(s)	1285
BsnI	GGCC	1 cut(s)	713
Bso31I	GGTCTC	1 cut(s)	79
Bsp1286I	GDGCHC	2 cut(s)	261, 906
Bsp13I	TCCGGA	1 cut(s)	485
Bsp143I	GATC	9 cut(s)	121, 138, 396, 505, 907, 1021, 1248, 1538, 1672
BspANI	GGCC	1 cut(s)	713
BspCNI	CTCAG	3 cut(s)	168, 838, 1775
BspEI	TCCGGA	1 cut(s)	485
BspFNI	CGCG	3 cut(s)	92, 203, 643
BspHI	TCATGA	3 cut(s)	327, 360, 855
BspMI	ACCTGC	3 cut(s)	286, 324, 1882
BspOI	GCTAGC	2 cut(s)	777, 923
BspPI	GGATC	3 cut(s)	116, 513, 1667
BspTNI	GGTCTC	1 cut(s)	79
BsrBI	CCGCTC	2 cut(s)	194, 466
BsrDI	GCAATG	1 cut(s)	891
BsrFI	RCCGGY	1 cut(s)	1474
BsrI	ACTGG	6 cut(s)	82, 309, 404, 1144, 1388, 1807
BssAI	RCCGGY	1 cut(s)	1474
BssHII	GCGCGC	1 cut(s)	201
BssMI	GATC	9 cut(s)	121, 138, 396, 505, 907, 1021, 1248, 1538, 1672
BssT1I	CCWWGG	4 cut(s)	1159, 1238, 1462, 1908
Bst2UI	CCWGG	3 cut(s)	107, 750, 1446
Bst4CI	ACNGT	5 cut(s)	1205, 1433, 1664, 1820, 1840
Bst6I	CTCTTC	1 cut(s)	594
BstC8I	GCNNGC	4 cut(s)	203, 775, 921, 1131
BstDEI	CTNAG	7 cut(s)	8, 98, 155, 720, 803, 825, 1762
BstDSI	CCRYGG	3 cut(s)	90, 641, 1280
BstEII	GGTNACC	1 cut(s)	1805
BstENI	CCTNNNNNAGG	1 cut(s)	293
BstF5I	GGATG	9 cut(s)	73, 156, 280, 478, 521, 595, 613, 622, 623
BstFNI	CGCG	3 cut(s)	92, 203, 643
BstH2I	RGCGCY	2 cut(s)	422, 687
BstHHI	GCGC	4 cut(s)	203, 205, 421, 686
BstKTI	GATC	9 cut(s)	124, 141, 399, 508, 910, 1024, 1251, 1541, 1675
BstMAI	GTCTC	3 cut(s)	79, 596, 828
BstMBI	GATC	9 cut(s)	121, 138, 396, 505, 907, 1021, 1248, 1538, 1672
BstMCI	CGRYCG	1 cut(s)	1822
BstMWI	GCNNNNNNNGC	4 cut(s)	200, 211, 1243, 1371
BstNI	CCWGG	3 cut(s)	107, 750, 1446
BstNSI	RCATGY	2 cut(s)	265, 443
BstPI	GGTNACC	1 cut(s)	1805
BstSCI	CCNGG	3 cut(s)	105, 748, 1444
BstSLI	GKGCMC	1 cut(s)	261
BstUI	CGCG	3 cut(s)	92, 203, 643
BstV1I	GCAGC	8 cut(s)	198, 448, 523, 980, 1153, 1246, 1315, 1597
BstV2I	GAAGAC	1 cut(s)	1521
BstX2I	RGATCY	2 cut(s)	1248, 1538
BstYI	RGATCY	2 cut(s)	1248, 1538
BsuI	GTATCC	1 cut(s)	227
BsuRI	GGCC	1 cut(s)	713
BtgI	CCRYGG	3 cut(s)	90, 641, 1280
BtrI	CACGTC	1 cut(s)	1519
BtsCI	GGATG	9 cut(s)	73, 156, 280, 478, 521, 595, 613, 622, 623
BtsIMutI	CAGTG	4 cut(s)	256, 1302, 1395, 1770
BveI	ACCTGC	3 cut(s)	286, 324, 1882
Cac8I	GCNNGC	4 cut(s)	203, 775, 921, 1131
CciI	TCATGA	3 cut(s)	327, 360, 855
CfoI	GCGC	4 cut(s)	203, 205, 421, 686
Cfr10I	RCCGGY	1 cut(s)	1474
Cfr13I	GGNCC	2 cut(s)	313, 1871
Cfr42I	CCGCGG	2 cut(s)	93, 644
CseI	GACGC	3 cut(s)	861, 925, 1482
Csp6I	GTAC	2 cut(s)	799, 1470
CspAI	ACCGGT	1 cut(s)	1474
CviQI	GTAC	2 cut(s)	799, 1470
DdeI	CTNAG	7 cut(s)	8, 98, 155, 720, 803, 825, 1762
DpnI	GATC	9 cut(s)	123, 140, 398, 507, 909, 1023, 1250, 1540, 1674
DpnII	GATC	9 cut(s)	121, 138, 396, 505, 907, 1021, 1248, 1538, 1672
DriI	GACNNNNNGTC	1 cut(s)	101
Eam1104I	CTCTTC	1 cut(s)	594
Eam1105I	GACNNNNNGTC	1 cut(s)	101
EarI	CTCTTC	1 cut(s)	594
Eco130I	CCWWGG	4 cut(s)	1159, 1238, 1462, 1908
Eco24I	GRGCYC	1 cut(s)	906
Eco31I	GGTCTC	1 cut(s)	79
Eco47I	GGWCC	2 cut(s)	313, 1871
Eco57I	CTGAAG	4 cut(s)	443, 767, 896, 1533
Eco91I	GGTNACC	1 cut(s)	1805
EcoNI	CCTNNNNNAGG	1 cut(s)	293
EcoO65I	GGTNACC	1 cut(s)	1805
EcoRI	GAATTC	1 cut(s)	1101
EcoRII	CCWGG	3 cut(s)	105, 748, 1444
EcoT14I	CCWWGG	4 cut(s)	1159, 1238, 1462, 1908
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	1 cut(s)	906
ErhI	CCWWGG	4 cut(s)	1159, 1238, 1462, 1908
Esp3I	CGTCTC	1 cut(s)	596
FaqI	GGGAC	2 cut(s)	108, 1619
FauI	CCCGC	3 cut(s)	85, 97, 636
FauNDI	CATATG	2 cut(s)	431, 1065
FbaI	TGATCA	2 cut(s)	396, 1021
FblI	GTMKAC	1 cut(s)	114
FokI	GGATG	9 cut(s)	80, 163, 287, 485, 508, 602, 610, 620, 629
FriOI	GRGCYC	1 cut(s)	906
FspBI	CTAG	7 cut(s)	39, 290, 698, 759, 774, 920, 1707
GlaI	GCGC	4 cut(s)	202, 204, 420, 685
GsuI	CTGGAG	2 cut(s)	326, 752
HaeII	RGCGCY	2 cut(s)	422, 687
HaeIII	GGCC	1 cut(s)	713
HapII	CCGG	3 cut(s)	486, 972, 1475
HgaI	GACGC	3 cut(s)	861, 925, 1482
HhaI	GCGC	4 cut(s)	203, 205, 421, 686
Hin6I	GCGC	4 cut(s)	201, 203, 419, 684
HinP1I	GCGC	4 cut(s)	201, 203, 419, 684
HincII	GTYRAC	5 cut(s)	33, 115, 935, 987, 1831
HindII	GTYRAC	5 cut(s)	33, 115, 935, 987, 1831
HinfI	GANTC	7 cut(s)	102, 279, 373, 620, 859, 1259, 1732
HpaII	CCGG	3 cut(s)	486, 972, 1475
HphI	GGTGA	1 cut(s)	1799
Hpy166II	GTNNAC	9 cut(s)	33, 115, 259, 935, 987, 1436, 1472, 1721, 1831
Hpy8I	GTNNAC	9 cut(s)	33, 115, 259, 935, 987, 1436, 1472, 1721, 1831
Hpy99I	CGWCG	1 cut(s)	119
HpyAV	CCTTC	7 cut(s)	358, 463, 494, 551, 580, 801, 1766
HpyCH4III	ACNGT	5 cut(s)	1205, 1433, 1664, 1820, 1840
HpyCH4IV	ACGT	1 cut(s)	1518
HpyF10VI	GCNNNNNNNGC	4 cut(s)	200, 211, 1243, 1371
HpyF3I	CTNAG	7 cut(s)	8, 98, 155, 720, 803, 825, 1762
HpySE526I	ACGT	1 cut(s)	1518
HspAI	GCGC	4 cut(s)	201, 203, 419, 684
Kpn2I	TCCGGA	1 cut(s)	485
Ksp22I	TGATCA	2 cut(s)	396, 1021
KspI	CCGCGG	2 cut(s)	93, 644
Kzo9I	GATC	9 cut(s)	121, 138, 396, 505, 907, 1021, 1248, 1538, 1672
LmnI	GCTCC	4 cut(s)	478, 881, 1163, 1502
Lsp1109I	GCAGC	8 cut(s)	198, 448, 523, 980, 1153, 1246, 1315, 1597
LweI	GCATC	5 cut(s)	13, 141, 463, 520, 1402
MaeI	CTAG	7 cut(s)	39, 290, 698, 759, 774, 920, 1707
MaeII	ACGT	1 cut(s)	1518
MaeIII	GTNAC	7 cut(s)	175, 370, 925, 1519, 1578, 1638, 1805
MalI	GATC	9 cut(s)	123, 140, 398, 507, 909, 1023, 1250, 1540, 1674
MbiI	CCGCTC	2 cut(s)	194, 466
MboI	GATC	9 cut(s)	121, 138, 396, 505, 907, 1021, 1248, 1538, 1672
MfeI	CAATTG	1 cut(s)	1229
MflI	RGATCY	2 cut(s)	1248, 1538
MhlI	GDGCHC	2 cut(s)	261, 906
MluCI	AATT	7 cut(s)	674, 726, 838, 1101, 1229, 1414, 1453
MlyI	GAGTC	3 cut(s)	111, 367, 868
MmeI	TCCRAC	3 cut(s)	280, 1130, 1726
Mph1103I	ATGCAT	1 cut(s)	6
MroI	TCCGGA	1 cut(s)	485
MroXI	GAANNNNTTC	1 cut(s)	1034
MseI	TTAA	6 cut(s)	632, 690, 1095, 1572, 1815, 1848
MslI	CAYNNNNRTG	1 cut(s)	1007
MspA1I	CMGCKG	3 cut(s)	92, 338, 643
MspI	CCGG	3 cut(s)	486, 972, 1475
MspR9I	CCNGG	3 cut(s)	107, 750, 1446
MunI	CAATTG	1 cut(s)	1229
Mva1269I	GAATGC	1 cut(s)	1285
MvaI	CCWGG	3 cut(s)	107, 750, 1446
MvnI	CGCG	3 cut(s)	92, 203, 643
MwoI	GCNNNNNNNGC	4 cut(s)	200, 211, 1243, 1371
NdeI	CATATG	2 cut(s)	431, 1065
NdeII	GATC	9 cut(s)	121, 138, 396, 505, 907, 1021, 1248, 1538, 1672
NheI	GCTAGC	2 cut(s)	773, 919
NmeAIII	GCCGAG	1 cut(s)	527
NmuCI	GTSAC	6 cut(s)	175, 370, 925, 1519, 1638, 1805
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	2 cut(s)	265, 443
PagI	TCATGA	3 cut(s)	327, 360, 855
PauI	GCGCGC	1 cut(s)	201
PcsI	WCGNNNNNNNCGW	1 cut(s)	41
PctI	GAATGC	1 cut(s)	1285
PdmI	GAANNNNTTC	1 cut(s)	1034
PfeI	GAWTC	4 cut(s)	279, 620, 1259, 1732
PinAI	ACCGGT	1 cut(s)	1474
PleI	GAGTC	3 cut(s)	110, 367, 867
PpsI	GAGTC	3 cut(s)	110, 367, 867
Psp6I	CCWGG	3 cut(s)	105, 748, 1444
PspEI	GGTNACC	1 cut(s)	1805
PspGI	CCWGG	3 cut(s)	105, 748, 1444
PspPI	GGNCC	2 cut(s)	313, 1871
PsuI	RGATCY	2 cut(s)	1248, 1538
PteI	GCGCGC	1 cut(s)	201
RsaI	GTAC	2 cut(s)	800, 1471
RsaNI	GTAC	2 cut(s)	799, 1470
RseI	CAYNNNNRTG	1 cut(s)	1007
SacII	CCGCGG	2 cut(s)	93, 644
SalI	GTCGAC	1 cut(s)	113
SaqAI	TTAA	6 cut(s)	632, 690, 1095, 1572, 1815, 1848
Sau3AI	GATC	9 cut(s)	121, 138, 396, 505, 907, 1021, 1248, 1538, 1672
Sau96I	GGNCC	2 cut(s)	313, 1871
SchI	GAGTC	3 cut(s)	111, 367, 868
ScrFI	CCNGG	3 cut(s)	107, 750, 1446
SduI	GDGCHC	2 cut(s)	261, 906
SfaNI	GCATC	5 cut(s)	13, 141, 463, 520, 1402
Sfr303I	CCGCGG	2 cut(s)	93, 644
SgrBI	CCGCGG	2 cut(s)	93, 644
SinI	GGWCC	2 cut(s)	313, 1871
SmiMI	CAYNNNNRTG	1 cut(s)	1007
SmlI	CTYRAG	1 cut(s)	864
SmoI	CTYRAG	1 cut(s)	864
Sse9I	AATT	7 cut(s)	674, 726, 838, 1101, 1229, 1414, 1453
SspI	AATATT	1 cut(s)	1918
SspMI	CTAG	7 cut(s)	39, 290, 698, 759, 774, 920, 1707
StyD4I	CCNGG	3 cut(s)	105, 748, 1444
StyI	CCWWGG	4 cut(s)	1159, 1238, 1462, 1908
TaaI	ACNGT	5 cut(s)	1205, 1433, 1664, 1820, 1840
TaiI	ACGT	1 cut(s)	1521
TaqI	TCGA	7 cut(s)	44, 114, 190, 217, 660, 906, 1632
TasI	AATT	7 cut(s)	674, 726, 838, 1101, 1229, 1414, 1453
TatI	WGTACW	1 cut(s)	1469
TauI	GCSGC	3 cut(s)	643, 1222, 1368
TfiI	GAWTC	4 cut(s)	279, 620, 1259, 1732
Tru1I	TTAA	6 cut(s)	632, 690, 1095, 1572, 1815, 1848
Tru9I	TTAA	6 cut(s)	632, 690, 1095, 1572, 1815, 1848
TscAI	CASTG	4 cut(s)	256, 1302, 1395, 1770
TseFI	GTSAC	6 cut(s)	175, 370, 925, 1519, 1638, 1805
TseI	GCWGC	8 cut(s)	211, 436, 511, 968, 1166, 1234, 1303, 1585
Tsp45I	GTSAC	6 cut(s)	175, 370, 925, 1519, 1638, 1805
TspGWI	ACGGA	2 cut(s)	246, 620
TspRI	CASTG	4 cut(s)	256, 1302, 1395, 1770
VneI	GTGCAC	1 cut(s)	257
VpaK11BI	GGWCC	2 cut(s)	313, 1871
XagI	CCTNNNNNAGG	1 cut(s)	293
XapI	RAATTY	2 cut(s)	726, 1101
XceI	RCATGY	2 cut(s)	265, 443
XmiI	GTMKAC	1 cut(s)	114
XmnI	GAANNNNTTC	1 cut(s)	1034
XspI	CTAG	7 cut(s)	39, 290, 698, 759, 774, 920, 1707
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.