Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0005479

Physical Location & Seq

Genomic Coordinates Forward (+)

49760874 .. 49765005

Gene Structure 4132 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ39350

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2031 bp

ATGAATCTCAACAACGGTAGGGGATCTATGTCAACGGCCAGCTCCAGTGGAGCTTGGAAATCGGGAGATGTGGTACCTGACCAGTTTCCTGCGGGTTTAAGAGTCCTGGTTGTTGACGACGATCCTACTTGTCTTATGATCTTGGAGAAGATGCTGCGTACTTGTCTCTACGAAGTTACGAAATGCAATCGAGCTGAGATCGCACTGTCCCTGCTTCGAGAGAACAAAAATGGATATGATGTAGTTATTAGTGATGTCCACATGCCTGACATGGATGGATTCAAGCTCCTCGAGCAAATTGGACTAGAGATGGACCTGCCGGTTATCATGATGTCTGCTGATGATGGGAAAAGTGTTGTTATGAAGGGTGTCACTCATGGTGCTTGTGATTATCTAATCAAACCGGTCCGGATTGAGGCGCTAAAGAACATATGGCAGCATGTAGTTCGAAAGAAGAAGAATGAGTGGAAGGATGTGGAGCAATCTGGAAGTGTGGATGAAGGAGATCGGCAACAAAAACCATGTGAAGAACCAGATTACTCATCTTCAGCAAATGAAGGGACTTGGAAGAACTCAAAGAAGAGGAAAGATGAGGACGACGATGCGGAGGATAGGGATGATACATCCACGTTAAAGAAGCCTAGGGTGGTTTGGTCGGTTGAGCTCCATCAACAATTTGTCGGTGCTGTCAATCAATTAGGCATTGATAAGGCGGTTCCTAAGAAAATTTTGGAGTTGATGAATGTTCCTGGGCTCACTAGAGAAAATGTTGCTAGCCATCTACAGAAATATCGGTTGTACCTTAGAAGGTTGAGTGGGGTATCGCAGCACCAGAGTAATTTGAACAACTCTTTCATAAGTTCTCAAGACGCATCTTTTGGAGCCATGTCGTCGCTCAATGGGATTGATCTTCAGACTCTAGCCGCCACTGGTCAACTACCTGCTCAAAGCCTTGCCACACTTCAAGCAGCCGGGCTCGGTAGGTCAACAGCAAAATCTGGCATACCAATGCCCCTTGTTGATCAAAGGAACTTGTTCAGCTTTGAAAATCCAAAGTTGAGGTTTGCAGAGGGGCAGCAACATCATAGCAGTGGTAAACCAATGAACTTACTTCACGGCATTCCAACGACTATGGAGGCAAAGCAGCTTGCCAACTTGCACCAGTCTGCACAATCCCTTGGGCCTGTGAATATGCAAGTCAATGCCCATGGAGTCCAAAACAACTCTCTATATATGATAGGTCAACCACAGTCAAGAGGGCAGATCCTGAATGAAAGTTCTGGGACTCATGTTCCTAGGCTTCCATCATCAATTGGGCAGCCTATGGTATCAAACGGTATTCCTAGTGGAGTTATAGGAAGAAATGGGATTTCTGATGTTGGCAGAGGGACAGGATATAATCCAGTTCCGCAGAACTCTTCAATGTTGAATTTTCCCTTGAACAACACTCCAGAACTGCCAGGCAATAGTTACACTCTTGGCAGTACACAAGGGATGTCCAGCCTCACGCCTAAAGGGTCATTTCCAGATGAGGTTAACTCTGAAATAAAAAGATCTGGGGGATTTGTTCCAAGTTATGATATTTTTAATGAGTTACATCAGCACAAGTCCAACGATTGGAATTTACAGAATGTAGGCTTGACCTTTGATGCCTCTCACCATGCAAACTCCATCCATGGTAGCCTTGACTCCTCAGGTTTAGTTCATCAAGGTTTTTCTTCTAACCAAAGGAGTGCACAAAGCCGGAATCCATCTAATGTTGGGAAAGCTATGTTCCCAATGGGGGCGGCAAGCACTGATCATGGGCATGCGCAAAATAGTGGTCAACACCTTAGCAACGGTCTTATTGTTGACAATCCAGTTCGGATTAAATCTGAAAGGCATTCTGATGCATCTCAAAATAACTTCTTTCATGATCAATATGGTCAGGAGGATCTAATGAGTGCACTTCTCAAACAGCAAGGGGGAGTTGGACCATCTGAAAATGAGTTTGACTTTGATGGGTATTCCTTGGATAATATTCCTGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000156 GO:0000160 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0009653 GO:0009719 GO:0009723 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009873 GO:0009888 GO:0009889 GO:0009987 GO:0010015 GO:0010033 GO:0010073 GO:0010075 GO:0010082 GO:0010119 GO:0010150 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022622 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0035556 GO:0040008 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048638 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0051716 GO:0060089 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071369 GO:0071495 GO:0080050 GO:0080090 GO:0080113 GO:0090693 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:2000026 GO:2000112 GO:2000241 GO:2000280 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Myb_DNA-binding Response_reg

Protein Analysis

676

Amino Acids

73.71

Weight (kDa)

6.09

Isoelectric Point (pI)

42.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Response_reg	PF00072	35 - 143	1.5e-23	Response regulator receiver domain
Myb_DNA-binding	PF00249	215 - 265	7.5e-08	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005479)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16857 AT3G16857 AT3G16857
fragaria_vesca	FvH4_4g19230 FvH4_4g19230
malus_domestica	MD13G1159700.v1.1 MD16G1159400.v1.1
prunus_persica	Prupe.1G126400_v2.0.a1 Prupe.1G126400_v2.0.a1
pyrus_communis	pycom13g13610 pycom16g13440
rosa_chinensis	RchiOBHm_Chr4g0424211
rosa_laevigata	RLG00000007496
rosa_multiflora	Rmu_co8430763.1_g000001 Rmu_sc0002260.1_g000035 Rmu_sc0019001.1_g000002 Rmu_sc0028069.1_g000001 Rmu_sc0028070.1_g000001
rosa_roxburghii	Rroxscaffold_5G00366160
rosa_rugosa	Rorug04G0193900 Rorug04G0194000 Rorug04G0194100 Rorug04G0194200 Rorug04G0194300
rosa_samantha	Rh4AG251700 Rh4BG257000 Rh4CG267600 Rh4DG251400
rosa_wichuraiana	Rw4G021700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1812
Acc36I	ACCTGC	2 cut(s)	324, 949
Acc65I	GGTACC	1 cut(s)	73
AccB1I	GGYRCC	1 cut(s)	73
AccB7I	CCANNNNNTGG	1 cut(s)	1617
AccIII	TCCGGA	1 cut(s)	408
AciI	CCGC	6 cut(s)	92, 605, 713, 924, 1409, 1787
AclWI	GGATC	4 cut(s)	31, 116, 1258, 1941
AcoI	YGGCCR	1 cut(s)	36
AcsI	RAATTY	3 cut(s)	726, 1429, 1621
AcuI	CTGAAG	2 cut(s)	531, 896
AfaI	GTAC	4 cut(s)	75, 160, 800, 1486
AfiI	CCNNNNNNNGG	3 cut(s)	415, 1617, 1783
AgeI	ACCGGT	1 cut(s)	403
AgsI	TTSAA	7 cut(s)	283, 844, 965, 1046, 1422, 1429, 1441
AjnI	CCWGG	3 cut(s)	105, 748, 1459
AluBI	AGCT	8 cut(s)	42, 53, 194, 286, 664, 1041, 1147, 1769
AluI	AGCT	8 cut(s)	42, 53, 194, 286, 664, 1041, 1147, 1769
Alw21I	GWGCWC	3 cut(s)	666, 1738, 1948
Alw26I	GTCTC	1 cut(s)	170
Alw44I	GTGCAC	2 cut(s)	1734, 1944
AlwI	GGATC	4 cut(s)	31, 116, 1258, 1941
AlwNI	CAGNNNCTG	1 cut(s)	1267
Ama87I	CYCGRG	1 cut(s)	290
Aor13HI	TCCGGA	1 cut(s)	408
AoxI	GGCC	2 cut(s)	36, 1181
ApaLI	GTGCAC	2 cut(s)	1734, 1944
ApeKI	GCWGC	7 cut(s)	154, 436, 826, 968, 1075, 1144, 1318
ApoI	RAATTY	3 cut(s)	726, 1429, 1621
ArsI	GACNNNNNNTTYG	4 cut(s)	860, 892, 1807, 1839
AsiGI	ACCGGT	1 cut(s)	403
Asp700I	GAANNNNTTC	1 cut(s)	1034
Asp718I	GGTACC	1 cut(s)	73
AspA2I	CCTAGG	2 cut(s)	641, 1295
AspLEI	GCGC	2 cut(s)	421, 1813
AspS9I	GGNCC	4 cut(s)	313, 406, 1181, 1973
AsuC2I	CCSGG	1 cut(s)	973
AsuHPI	GGTGA	1 cut(s)	1649
AsuII	TTCGAA	1 cut(s)	448
AsuNHI	GCTAGC	1 cut(s)	773
AvaI	CYCGRG	1 cut(s)	290
AvaII	GGWCC	3 cut(s)	313, 406, 1973
AvrII	CCTAGG	2 cut(s)	641, 1295
AxyI	CCTNAGG	1 cut(s)	1693
BaeGI	GKGCMC	2 cut(s)	1738, 1948
BanI	GGYRCC	1 cut(s)	73
BanII	GRGCYC	3 cut(s)	666, 756, 978
Bbv12I	GWGCWC	3 cut(s)	666, 1738, 1948
BbvI	GCAGC	7 cut(s)	141, 448, 838, 980, 1087, 1156, 1330
BceAI	ACGGC	2 cut(s)	51, 1132
BcgI	CGANNNNNNTGC	2 cut(s)	428, 462
BciT130I	CCWGG	3 cut(s)	107, 750, 1461
BclI	TGATCA	3 cut(s)	1021, 1798, 1915
BcnI	CCSGG	1 cut(s)	973
BcoDI	GTCTC	1 cut(s)	170
BfaI	CTAG	7 cut(s)	305, 642, 759, 774, 920, 1296, 1344
BfmI	CTRYAG	1 cut(s)	782
BfoI	RGCGCY	1 cut(s)	422
BfuAI	ACCTGC	2 cut(s)	324, 949
BglII	AGATCT	1 cut(s)	1553
BisI	GCNGC	9 cut(s)	155, 437, 827, 924, 969, 1076, 1145, 1319, 1788
BlnI	CCTAGG	2 cut(s)	641, 1295
BlsI	GCNGC	9 cut(s)	156, 438, 828, 925, 970, 1077, 1146, 1320, 1789
Bme1390I	CCNGG	4 cut(s)	107, 750, 973, 1461
Bme18I	GGWCC	3 cut(s)	313, 406, 1973
BmeT110I	CYCGRG	1 cut(s)	290
BmgT120I	GGNCC	4 cut(s)	313, 406, 1181, 1973
BmiI	GGNNCC	3 cut(s)	75, 717, 883
BmrFI	CCNGG	4 cut(s)	107, 750, 973, 1461
BmsI	GCATC	6 cut(s)	141, 592, 881, 1639, 1879, 1901
BmtI	GCTAGC	1 cut(s)	777
BplI	GAGNNNNNCTC	2 cut(s)	1523, 1555
BpmI	CTGGAG	2 cut(s)	28, 1434
Bpu10I	CCTNAGC	1 cut(s)	1832
Bpu14I	TTCGAA	1 cut(s)	448
BpuEI	CTTGAG	1 cut(s)	849
BpuMI	CCSGG	1 cut(s)	973
BsaJI	CCNNGG	7 cut(s)	641, 749, 1177, 1207, 1295, 1675, 2010
BsaWI	WCCGGW	2 cut(s)	403, 408
BsaXI	ACNNNNNCTCC	2 cut(s)	57, 87
Bsc4I	CCNNNNNNNGG	3 cut(s)	415, 1617, 1783
Bse118I	RCCGGY	2 cut(s)	319, 403
Bse1I	ACTGG	6 cut(s)	45, 82, 934, 1162, 1403, 1859
Bse21I	CCTNAGG	1 cut(s)	1693
BseAI	TCCGGA	1 cut(s)	408
BseBI	CCWGG	3 cut(s)	107, 750, 1461
BseDI	CCNNGG	7 cut(s)	641, 749, 1177, 1207, 1295, 1675, 2010
BseGI	GGATG	7 cut(s)	280, 478, 502, 622, 623, 1500, 1671
BseLI	CCNNNNNNNGG	3 cut(s)	415, 1617, 1783
BseMII	CTCAG	2 cut(s)	186, 1707
BseNI	ACTGG	6 cut(s)	45, 82, 934, 1162, 1403, 1859
BseRI	GAGGAG	2 cut(s)	278, 1681
BseSI	GKGCMC	2 cut(s)	1738, 1948
BseXI	GCAGC	7 cut(s)	141, 448, 838, 980, 1087, 1156, 1330
BsgI	GTGCAG	1 cut(s)	1152
BshFI	GGCC	2 cut(s)	38, 1183
BshNI	GGYRCC	1 cut(s)	73
BshTI	ACCGGT	1 cut(s)	403
BsiHKAI	GWGCWC	3 cut(s)	666, 1738, 1948
BsiHKCI	CYCGRG	1 cut(s)	290
BsiSI	CCGG	5 cut(s)	320, 404, 409, 972, 1744
BslFI	GGGAC	4 cut(s)	193, 574, 1297, 1402
BslI	CCNNNNNNNGG	3 cut(s)	415, 1617, 1783
BsmAI	GTCTC	1 cut(s)	170
BsmFI	GGGAC	4 cut(s)	193, 574, 1297, 1402
BsmI	GAATGC	2 cut(s)	1119, 1882
BsnI	GGCC	2 cut(s)	38, 1183
BsoBI	CYCGRG	1 cut(s)	290
Bsp119I	TTCGAA	1 cut(s)	448
Bsp1286I	GDGCHC	5 cut(s)	666, 756, 978, 1738, 1948
Bsp13I	TCCGGA	1 cut(s)	408
Bsp19I	CCATGG	2 cut(s)	1207, 1675
BspACI	CCGC	6 cut(s)	92, 605, 713, 924, 1409, 1787
BspANI	GGCC	2 cut(s)	38, 1183
BspCNI	CTCAG	2 cut(s)	187, 1706
BspEI	TCCGGA	1 cut(s)	408
BspHI	TCATGA	2 cut(s)	327, 1912
BspLI	GGNNCC	3 cut(s)	75, 717, 883
BspMI	ACCTGC	2 cut(s)	324, 949
BspOI	GCTAGC	1 cut(s)	777
BspPI	GGATC	4 cut(s)	31, 116, 1258, 1941
BspT104I	TTCGAA	1 cut(s)	448
BspT107I	GGYRCC	1 cut(s)	73
BsrFI	RCCGGY	2 cut(s)	319, 403
BsrI	ACTGG	6 cut(s)	45, 82, 934, 1162, 1403, 1859
BssAI	RCCGGY	2 cut(s)	319, 403
BssECI	CCNNGG	7 cut(s)	641, 749, 1177, 1207, 1295, 1675, 2010
BssT1I	CCWWGG	6 cut(s)	641, 1177, 1207, 1295, 1675, 2010
Bst2UI	CCWGG	3 cut(s)	107, 750, 1461
Bst4CI	ACNGT	5 cut(s)	17, 207, 1251, 1337, 1841
Bst6I	CTCTTC	2 cut(s)	575, 1423
BstBI	TTCGAA	1 cut(s)	448
BstC8I	GCNNGC	5 cut(s)	40, 775, 1149, 1792, 1809
BstDEI	CTNAG	5 cut(s)	195, 720, 803, 1693, 1832
BstDSI	CCRYGG	2 cut(s)	1207, 1675
BstF5I	GGATG	7 cut(s)	280, 478, 502, 622, 623, 1500, 1671
BstH2I	RGCGCY	1 cut(s)	422
BstHHI	GCGC	2 cut(s)	421, 1813
BstMAI	GTCTC	1 cut(s)	170
BstMWI	GCNNNNNNNGC	2 cut(s)	200, 292
BstNI	CCWGG	3 cut(s)	107, 750, 1461
BstNSI	RCATGY	3 cut(s)	265, 443, 1811
BstSCI	CCNGG	4 cut(s)	105, 748, 971, 1459
BstSFI	CTRYAG	1 cut(s)	782
BstSLI	GKGCMC	2 cut(s)	1738, 1948
BstV1I	GCAGC	7 cut(s)	141, 448, 838, 980, 1087, 1156, 1330
BstX2I	RGATCY	4 cut(s)	23, 1263, 1553, 1933
BstYI	RGATCY	4 cut(s)	23, 1263, 1553, 1933
Bsu36I	CCTNAGG	1 cut(s)	1693
BsuRI	GGCC	2 cut(s)	38, 1183
BtgI	CCRYGG	2 cut(s)	1207, 1675
BtsCI	GGATG	7 cut(s)	280, 478, 502, 622, 623, 1500, 1671
BtsI	GCAGTG	1 cut(s)	1096
BtsIMutI	CAGTG	5 cut(s)	52, 203, 927, 1096, 1794
BveI	ACCTGC	2 cut(s)	324, 949
Cac8I	GCNNGC	5 cut(s)	40, 775, 1149, 1792, 1809
CaiI	CAGNNNCTG	1 cut(s)	1267
CciI	TCATGA	2 cut(s)	327, 1912
CfoI	GCGC	2 cut(s)	421, 1813
Cfr10I	RCCGGY	2 cut(s)	319, 403
Cfr13I	GGNCC	4 cut(s)	313, 406, 1181, 1973
CpoI	CGGWCCG	1 cut(s)	406
CseI	GACGC	1 cut(s)	878
Csp6I	GTAC	4 cut(s)	74, 159, 799, 1485
CspAI	ACCGGT	1 cut(s)	403
CspI	CGGWCCG	1 cut(s)	406
CviQI	GTAC	4 cut(s)	74, 159, 799, 1485
DdeI	CTNAG	5 cut(s)	195, 720, 803, 1693, 1832
EaeI	YGGCCR	1 cut(s)	36
Eam1104I	CTCTTC	2 cut(s)	575, 1423
EarI	CTCTTC	2 cut(s)	575, 1423
Ecl136II	GAGCTC	1 cut(s)	664
Eco130I	CCWWGG	6 cut(s)	641, 1177, 1207, 1295, 1675, 2010
Eco24I	GRGCYC	3 cut(s)	666, 756, 978
Eco47I	GGWCC	3 cut(s)	313, 406, 1973
Eco53kI	GAGCTC	1 cut(s)	664
Eco57I	CTGAAG	2 cut(s)	531, 896
Eco81I	CCTNAGG	1 cut(s)	1693
Eco88I	CYCGRG	1 cut(s)	290
EcoICRI	GAGCTC	1 cut(s)	664
EcoRII	CCWGG	3 cut(s)	105, 748, 1459
EcoT14I	CCWWGG	6 cut(s)	641, 1177, 1207, 1295, 1675, 2010
EcoT22I	ATGCAT	1 cut(s)	1894
EcoT38I	GRGCYC	3 cut(s)	666, 756, 978
ErhI	CCWWGG	6 cut(s)	641, 1177, 1207, 1295, 1675, 2010
FaqI	GGGAC	4 cut(s)	193, 574, 1297, 1402
FauI	CCCGC	1 cut(s)	85
FauNDI	CATATG	1 cut(s)	431
FbaI	TGATCA	3 cut(s)	1021, 1798, 1915
Fnu4HI	GCNGC	9 cut(s)	155, 437, 827, 924, 969, 1076, 1145, 1319, 1788
FokI	GGATG	7 cut(s)	287, 485, 509, 610, 629, 1507, 1658
FriOI	GRGCYC	3 cut(s)	666, 756, 978
Fsp4HI	GCNGC	9 cut(s)	155, 437, 827, 924, 969, 1076, 1145, 1319, 1788
FspBI	CTAG	7 cut(s)	305, 642, 759, 774, 920, 1296, 1344
FspI	TGCGCA	1 cut(s)	1812
GlaI	GCGC	2 cut(s)	420, 1812
GluI	GCNGC	9 cut(s)	155, 437, 827, 924, 969, 1076, 1145, 1319, 1788
GsuI	CTGGAG	2 cut(s)	28, 1434
HaeII	RGCGCY	1 cut(s)	422
HaeIII	GGCC	2 cut(s)	38, 1183
HapII	CCGG	5 cut(s)	320, 404, 409, 972, 1744
HgaI	GACGC	1 cut(s)	878
HhaI	GCGC	2 cut(s)	421, 1813
Hin6I	GCGC	2 cut(s)	419, 1811
HinP1I	GCGC	2 cut(s)	419, 1811
HincII	GTYRAC	8 cut(s)	33, 115, 935, 987, 1244, 1537, 1826, 1852
HindII	GTYRAC	8 cut(s)	33, 115, 935, 987, 1244, 1537, 1826, 1852
HinfI	GANTC	8 cut(s)	4, 102, 279, 916, 1212, 1285, 1688, 1747
HpaI	GTTAAC	1 cut(s)	1537
HpaII	CCGG	5 cut(s)	320, 404, 409, 972, 1744
HphI	GGTGA	1 cut(s)	1649
Hpy188I	TCNGA	7 cut(s)	915, 1375, 1543, 1866, 1876, 1888, 1981
Hpy99I	CGWCG	3 cut(s)	122, 602, 895
HpyAV	CCTTC	5 cut(s)	358, 463, 494, 551, 801
HpyCH4III	ACNGT	5 cut(s)	17, 207, 1251, 1337, 1841
HpyCH4IV	ACGT	1 cut(s)	629
HpyCH4V	TGCA	9 cut(s)	186, 1067, 1159, 1169, 1195, 1664, 1736, 1892, 1946
HpyF10VI	GCNNNNNNNGC	2 cut(s)	200, 292
HpyF3I	CTNAG	5 cut(s)	195, 720, 803, 1693, 1832
HpySE526I	ACGT	1 cut(s)	629
HspAI	GCGC	2 cut(s)	419, 1811
Kpn2I	TCCGGA	1 cut(s)	408
KpnI	GGTACC	1 cut(s)	77
Ksp22I	TGATCA	3 cut(s)	1021, 1798, 1915
KspAI	GTTAAC	1 cut(s)	1537
LmnI	GCTCC	6 cut(s)	47, 50, 291, 478, 669, 881
Lsp1109I	GCAGC	7 cut(s)	141, 448, 838, 980, 1087, 1156, 1330
LweI	GCATC	6 cut(s)	141, 592, 881, 1639, 1879, 1901
MaeI	CTAG	7 cut(s)	305, 642, 759, 774, 920, 1296, 1344
MaeII	ACGT	1 cut(s)	629
MaeIII	GTNAC	4 cut(s)	175, 370, 1469, 1593
MfeI	CAATTG	1 cut(s)	1311
MflI	RGATCY	4 cut(s)	23, 1263, 1553, 1933
MhlI	GDGCHC	5 cut(s)	666, 756, 978, 1738, 1948
MluCI	AATT	8 cut(s)	297, 674, 695, 726, 838, 1311, 1429, 1621
MlyI	GAGTC	5 cut(s)	111, 910, 1221, 1279, 1682
MmeI	TCCRAC	3 cut(s)	1148, 1635, 1951
Mph1103I	ATGCAT	1 cut(s)	1894
MroI	TCCGGA	1 cut(s)	408
MroXI	GAANNNNTTC	1 cut(s)	1034
MseI	TTAA	5 cut(s)	98, 632, 1536, 1587, 1869
MslI	CAYNNNNRTG	4 cut(s)	1007, 1089, 1806, 1887
MspI	CCGG	5 cut(s)	320, 404, 409, 972, 1744
MspR9I	CCNGG	4 cut(s)	107, 750, 973, 1461
MunI	CAATTG	1 cut(s)	1311
Mva1269I	GAATGC	2 cut(s)	1119, 1882
MvaI	CCWGG	3 cut(s)	107, 750, 1461
MwoI	GCNNNNNNNGC	2 cut(s)	200, 292
NciI	CCSGG	1 cut(s)	973
NcoI	CCATGG	2 cut(s)	1207, 1675
NdeI	CATATG	1 cut(s)	431
NheI	GCTAGC	1 cut(s)	773
NlaIV	GGNNCC	3 cut(s)	75, 717, 883
NmuCI	GTSAC	1 cut(s)	370
NsbI	TGCGCA	1 cut(s)	1812
NsiI	ATGCAT	1 cut(s)	1894
NspI	RCATGY	3 cut(s)	265, 443, 1811
NspV	TTCGAA	1 cut(s)	448
PaeI	GCATGC	1 cut(s)	1811
PaeR7I	CTCGAG	1 cut(s)	290
PagI	TCATGA	2 cut(s)	327, 1912
PctI	GAATGC	2 cut(s)	1119, 1882
PdmI	GAANNNNTTC	1 cut(s)	1034
PfeI	GAWTC	3 cut(s)	4, 279, 1747
PflMI	CCANNNNNTGG	1 cut(s)	1617
PinAI	ACCGGT	1 cut(s)	403
PkrI	GCNGC	9 cut(s)	156, 438, 828, 925, 970, 1077, 1146, 1320, 1789
PleI	GAGTC	5 cut(s)	110, 910, 1220, 1279, 1682
PpsI	GAGTC	5 cut(s)	110, 910, 1220, 1279, 1682
Psp124BI	GAGCTC	1 cut(s)	666
Psp6I	CCWGG	3 cut(s)	105, 748, 1459
PspGI	CCWGG	3 cut(s)	105, 748, 1459
PspN4I	GGNNCC	3 cut(s)	75, 717, 883
PspPI	GGNCC	4 cut(s)	313, 406, 1181, 1973
PspXI	VCTCGAGB	1 cut(s)	290
PstNI	CAGNNNCTG	1 cut(s)	1267
PsuI	RGATCY	4 cut(s)	23, 1263, 1553, 1933
RsaI	GTAC	4 cut(s)	75, 160, 800, 1486
RsaNI	GTAC	4 cut(s)	74, 159, 799, 1485
RseI	CAYNNNNRTG	4 cut(s)	1007, 1089, 1806, 1887
Rsr2I	CGGWCCG	1 cut(s)	406
RsrII	CGGWCCG	1 cut(s)	406
SacI	GAGCTC	1 cut(s)	666
SaqAI	TTAA	5 cut(s)	98, 632, 1536, 1587, 1869
SatI	GCNGC	9 cut(s)	155, 437, 827, 924, 969, 1076, 1145, 1319, 1788
Sau96I	GGNCC	4 cut(s)	313, 406, 1181, 1973
SchI	GAGTC	5 cut(s)	111, 910, 1221, 1279, 1682
ScrFI	CCNGG	4 cut(s)	107, 750, 973, 1461
SduI	GDGCHC	5 cut(s)	666, 756, 978, 1738, 1948
SfaNI	GCATC	6 cut(s)	141, 592, 881, 1639, 1879, 1901
SfcI	CTRYAG	1 cut(s)	782
Sfr274I	CTCGAG	1 cut(s)	290
SfuI	TTCGAA	1 cut(s)	448
SinI	GGWCC	3 cut(s)	313, 406, 1973
SlaI	CTCGAG	1 cut(s)	290
SmiMI	CAYNNNNRTG	4 cut(s)	1007, 1089, 1806, 1887
SmlI	CTYRAG	2 cut(s)	290, 864
SmoI	CTYRAG	2 cut(s)	290, 864
SphI	GCATGC	1 cut(s)	1811
Sse9I	AATT	8 cut(s)	297, 674, 695, 726, 838, 1311, 1429, 1621
SsiI	CCGC	6 cut(s)	92, 605, 713, 924, 1409, 1787
SspI	AATATT	1 cut(s)	2020
SspMI	CTAG	7 cut(s)	305, 642, 759, 774, 920, 1296, 1344
SstI	GAGCTC	1 cut(s)	666
StyD4I	CCNGG	4 cut(s)	105, 748, 971, 1459
StyI	CCWWGG	6 cut(s)	641, 1177, 1207, 1295, 1675, 2010
TaaI	ACNGT	5 cut(s)	17, 207, 1251, 1337, 1841
TaiI	ACGT	1 cut(s)	632
TaqI	TCGA	4 cut(s)	190, 217, 291, 448
TasI	AATT	8 cut(s)	297, 674, 695, 726, 838, 1311, 1429, 1621
TatI	WGTACW	1 cut(s)	1484
TauI	GCSGC	2 cut(s)	926, 1790
TfiI	GAWTC	3 cut(s)	4, 279, 1747
Tru1I	TTAA	5 cut(s)	98, 632, 1536, 1587, 1869
Tru9I	TTAA	5 cut(s)	98, 632, 1536, 1587, 1869
TscAI	CASTG	5 cut(s)	52, 210, 934, 1096, 1801
TseFI	GTSAC	1 cut(s)	370
TseI	GCWGC	7 cut(s)	154, 436, 826, 968, 1075, 1144, 1318
Tsp45I	GTSAC	1 cut(s)	370
TspRI	CASTG	5 cut(s)	52, 210, 934, 1096, 1801
Van91I	CCANNNNNTGG	1 cut(s)	1617
VneI	GTGCAC	2 cut(s)	1734, 1944
VpaK11BI	GGWCC	3 cut(s)	313, 406, 1973
XapI	RAATTY	3 cut(s)	726, 1429, 1621
XceI	RCATGY	3 cut(s)	265, 443, 1811
XhoI	CTCGAG	1 cut(s)	290
XmaJI	CCTAGG	2 cut(s)	641, 1295
XmnI	GAANNNNTTC	1 cut(s)	1034
XspI	CTAG	7 cut(s)	305, 642, 759, 774, 920, 1296, 1344
Zsp2I	ATGCAT	1 cut(s)	1894

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.