Peptidyl-prolyl cis-trans
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G53720 AT1G53720 |
| fragaria_vesca | FvH4_3g15530 FvH4_3g15530 FvH4_3g15530 FvH4_3g21900 FvH4_4g19390 |
| malus_domestica | MD05G1222400.v1.1 MD10G1204000.v1.1 |
| prunus_persica | Prupe.4G137900_v2.0.a1 |
| pyrus_communis | pycom05g20510 pycom10g17460 pycom10g17470 |
| rosa_chinensis | RchiOBHm_Chr5g0026161 |
| rosa_laevigata | RLG00000032908 |
| rosa_multiflora | Rmu_sc0009679.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00053040 Rroxscaffold_1G00053150 |
| rosa_rugosa | Rorug05G0091100 Rorug05G0091200 Rorug05G0091300 Rorug05G0091400 Rorug05G0092300 |
| rosa_samantha | Rh5AG184100 Rh5BG180900 Rh5BG182100 Rh5CG199900 Rh5CG201500 Rh5DG182500 |
| rosa_wichuraiana | Rw5G016660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 297 |
| AccB1I | GGYRCC | 1 cut(s) | 60 |
| AcsI | RAATTY | 1 cut(s) | 80 |
| AcuI | CTGAAG | 1 cut(s) | 255 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 219 |
| AgsI | TTSAA | 1 cut(s) | 107 |
| AluBI | AGCT | 2 cut(s) | 91, 257 |
| AluI | AGCT | 2 cut(s) | 91, 257 |
| Alw26I | GTCTC | 2 cut(s) | 298, 342 |
| ApeKI | GCWGC | 1 cut(s) | 254 |
| ApoI | RAATTY | 1 cut(s) | 80 |
| AsuHPI | GGTGA | 1 cut(s) | 215 |
| BaeGI | GKGCMC | 1 cut(s) | 65 |
| BanI | GGYRCC | 1 cut(s) | 60 |
| BbvI | GCAGC | 1 cut(s) | 266 |
| BccI | CCATC | 1 cut(s) | 194 |
| BcoDI | GTCTC | 2 cut(s) | 298, 342 |
| BfmI | CTRYAG | 1 cut(s) | 147 |
| BisI | GCNGC | 1 cut(s) | 255 |
| BlsI | GCNGC | 1 cut(s) | 256 |
| BmiI | GGNNCC | 1 cut(s) | 62 |
| BsaJI | CCNNGG | 1 cut(s) | 213 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 21, 51 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 219 |
| Bse1I | ACTGG | 1 cut(s) | 127 |
| BseDI | CCNNGG | 1 cut(s) | 213 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 219 |
| BseNI | ACTGG | 1 cut(s) | 127 |
| BseSI | GKGCMC | 1 cut(s) | 65 |
| BseXI | GCAGC | 1 cut(s) | 266 |
| BsgI | GTGCAG | 1 cut(s) | 273 |
| BshNI | GGYRCC | 1 cut(s) | 60 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 219 |
| BsmAI | GTCTC | 2 cut(s) | 298, 342 |
| BsmI | GAATGC | 1 cut(s) | 242 |
| Bsp1286I | GDGCHC | 1 cut(s) | 65 |
| BspLI | GGNNCC | 1 cut(s) | 62 |
| BspT107I | GGYRCC | 1 cut(s) | 60 |
| BsrI | ACTGG | 1 cut(s) | 127 |
| BssECI | CCNNGG | 1 cut(s) | 213 |
| Bst6I | CTCTTC | 1 cut(s) | 182 |
| BstC8I | GCNNGC | 1 cut(s) | 327 |
| BstDSI | CCRYGG | 1 cut(s) | 213 |
| BstMAI | GTCTC | 2 cut(s) | 298, 342 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 322 |
| BstNSI | RCATGY | 2 cut(s) | 311, 329 |
| BstSFI | CTRYAG | 1 cut(s) | 147 |
| BstSLI | GKGCMC | 1 cut(s) | 65 |
| BstV1I | GCAGC | 1 cut(s) | 266 |
| BtgI | CCRYGG | 1 cut(s) | 213 |
| BtsIMutI | CAGTG | 1 cut(s) | 12 |
| Cac8I | GCNNGC | 1 cut(s) | 327 |
| CviAII | CATG | 3 cut(s) | 308, 317, 326 |
| CviJI | RGCY | 4 cut(s) | 91, 126, 257, 267 |
| CviKI_1 | RGCY | 4 cut(s) | 91, 126, 257, 267 |
| Eam1104I | CTCTTC | 1 cut(s) | 182 |
| EarI | CTCTTC | 1 cut(s) | 182 |
| Eco57I | CTGAAG | 1 cut(s) | 255 |
| FaeI | CATG | 3 cut(s) | 311, 320, 329 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 68, 100 |
| FatI | CATG | 3 cut(s) | 307, 316, 325 |
| Fnu4HI | GCNGC | 1 cut(s) | 255 |
| Fsp4HI | GCNGC | 1 cut(s) | 255 |
| GluI | GCNGC | 1 cut(s) | 255 |
| Hin1II | CATG | 3 cut(s) | 311, 320, 329 |
| HphI | GGTGA | 1 cut(s) | 215 |
| Hpy188I | TCNGA | 2 cut(s) | 115, 274 |
| HpyAV | CCTTC | 2 cut(s) | 274, 279 |
| HpyCH4V | TGCA | 5 cut(s) | 96, 240, 254, 311, 329 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 322 |
| Hsp92II | CATG | 3 cut(s) | 311, 320, 329 |
| LpnPI | CCDG | 2 cut(s) | 43, 108 |
| Lsp1109I | GCAGC | 1 cut(s) | 266 |
| MaeIII | GTNAC | 1 cut(s) | 16 |
| MboII | GAAGA | 1 cut(s) | 199 |
| MhlI | GDGCHC | 1 cut(s) | 65 |
| MluCI | AATT | 2 cut(s) | 80, 116 |
| MnlI | CCTC | 1 cut(s) | 75 |
| MseI | TTAA | 1 cut(s) | 86 |
| Mva1269I | GAATGC | 1 cut(s) | 242 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 322 |
| NlaIII | CATG | 3 cut(s) | 311, 320, 329 |
| NlaIV | GGNNCC | 1 cut(s) | 62 |
| NmuCI | GTSAC | 1 cut(s) | 16 |
| NspI | RCATGY | 2 cut(s) | 311, 329 |
| PaeI | GCATGC | 1 cut(s) | 329 |
| PctI | GAATGC | 1 cut(s) | 242 |
| PkrI | GCNGC | 1 cut(s) | 256 |
| PsiI | TTATAA | 1 cut(s) | 297 |
| PspN4I | GGNNCC | 1 cut(s) | 62 |
| SaqAI | TTAA | 1 cut(s) | 86 |
| SatI | GCNGC | 1 cut(s) | 255 |
| SduI | GDGCHC | 1 cut(s) | 65 |
| SetI | ASST | 3 cut(s) | 62, 93, 259 |
| SfcI | CTRYAG | 1 cut(s) | 147 |
| SgeI | CNNG | 8 cut(s) | 33, 70, 88, 135, 226, 320, 329, 338 |
| SphI | GCATGC | 1 cut(s) | 329 |
| Sse9I | AATT | 2 cut(s) | 80, 116 |
| TasI | AATT | 2 cut(s) | 80, 116 |
| Tru1I | TTAA | 1 cut(s) | 86 |
| Tru9I | TTAA | 1 cut(s) | 86 |
| TscAI | CASTG | 1 cut(s) | 12 |
| TseFI | GTSAC | 1 cut(s) | 16 |
| TseI | GCWGC | 1 cut(s) | 254 |
| Tsp45I | GTSAC | 1 cut(s) | 16 |
| TspDTI | ATGAA | 2 cut(s) | 149, 303 |
| TspGWI | ACGGA | 1 cut(s) | 230 |
| TspRI | CASTG | 1 cut(s) | 12 |
| XapI | RAATTY | 1 cut(s) | 80 |
| XceI | RCATGY | 2 cut(s) | 311, 329 |