Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0005064

Physical Location & Seq

Genomic Coordinates Reverse (-)

20228918 .. 20234521

Gene Structure 5604 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG182500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1953 bp

ATGTCAGTGCTTATAGTGACGAGTTTGGGGGATATAGTTGTGGATTTGTACACAGACAGGTGCCCTCTTACTGCCAAGAACTTCTTGAAGCTCTGCAAGATAAAGTATTACAATGGGTGTCTCTTTCACACAGTCCAGAAGGATTTTACTGCACAGACTGGTGACCCAACTGGAACGGGTTCCGGTGGTGATTCAATTTACAAATTTTTGTATGGTGATCAGGCTCGCTTTTTTGGTGACGAGATTCATCTTGATTTGAAGCATGCTAAAACAGGCACAATTGCCATGGCCAGTGCTGGAGAGAATCTCAATGCCTCTCAGTTCTATTTTACATTGCGTGATGATCTAGACTATCTCGATGGGAAGCATACAGTTTTTGGGGAGATAGCAGAGGGGTTGGAGACATTGACAAGGATCAATGAGGCTTATGTGGACGAGAGCAACAGACCCTATAAAAATATTAGAATCAAGCATACCTACATATTGGATGATCCTTTTGATGATCCTTTACAACTATCTGAGTTAATTCCTGGAGCCTCCCCGGAAGGCAAACCAAAGGATGAGGTTGATGATAATGTGCGTCTTGAAGATGATTGGGTACCTATGGATGAAGAATTGGCACCTGGAGAGCTTGAGGAGCGTCTTCGTGCCAAAGATGCACATTCCAGTGCTGTTGTACTTGAGAGTATAGGGGATATTCCTGATGTTGAGATAAAGCCGCCTGACAATGTGCTTTTTGTTTGTAAACTGAATCCAGTCACTCAAGATTTGGACTTGTTCACAATTTTCTCACGCTTTGGAACTGTGCAAGCGGCTGACATAATACGTGATTATAAGACTGGTGACAGTTTGTGTTATGCGTTCATAGAATTTGAAACGAAAGAGGCATGTGAACAAGCATATTTCAAGATGGATAATGCTTTGATTGATGACCGAAGAATTCATGTAGATTTTAGTCAGAGTGTTGCAAGGTTGTGGTCCCAATACAGGCGCAAAGAAGCGGGCAAAGGCAAAGGCTGCTTCAAATGTGGTGCACTTGATCACATTGCCAAAGAGTGCACTGGCGATAATGCCAGTAAACAGCAACCTCAGAAGTACGTATTGAAGAATGATAATGCACAGCGTGGTGGAGGCAACAACTCTAGTTATGAGATGGTATTTGATGGAGATACTCCAGAAAGTCCAAGACAAGAAAAGAGACATCAAGACCATGATCCAATTAACCGAGTTGAGAACCAAAAGATGAAAAGGCAGAGTTCTGAGGACCGAAGGCGGGATCAAGAAAATAAGCACTCAAGTGATAGAGACCGACACAGTGTCAGAGGTAGAGGATACAAAGAGGAATCAAGTCGAGACAGTAGATCAAGTCGAGACAGTAGATCAAGTCGATTTGGTGGAAGGAGTCATCGAGATTTTGAAGGGGAAAGGGATGCTGAAAAGCCTAAGGTGAGACAAAGAGACAAAGATGATAAGCTGGATCAACGGGAAAGTGGAAAGAGATACACAGATGATGGCACCTATGCAGAGAGAAGACATGATGGAGATTACAGAAAGAGTAGTGCAGATAGTGATAGAGAGAAGCATAAAGAGAGACGAAGAGACAGAGATGATAATATTGACCAGCAGGAGAGTGGAAAGAGGTATGCAGATGACGGTACGTATGCAGCACAGAGGGGAGATGAAGATTACAGAAAAAGGACTGCAGATGGTGATAGATCCACAGAAAGGAGTAGCGATAGAGAATACAGAAAGAGAAGTGTAGCTAATGGTAGCCCTTCAGAAAAGAGAGACGATGAATTTTATAGAAAGAGACGTGCAGAGCATGATAAGCATGCAGAAATGAGGGATGATAGAAACTTTAGGAAGAAATCTGTTGATGACAGACGAGACAAGAGAGATGAACCAGTTCATAAGAGAAGCGCAGGGAAGGAAGATAGAGAACATAGAAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000413 GO:0001932 GO:0003674 GO:0003676 GO:0003723 GO:0003755 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0006357 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019219 GO:0019220 GO:0019222 GO:0019538 GO:0031323 GO:0031326 GO:0031399 GO:0032268 GO:0036211 GO:0042325 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051174 GO:0051246 GO:0051252 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0097159 GO:0140096 GO:1901363 GO:1901407 GO:1901564 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pro_isomerase RRM_1 zf-CCHC

Protein Analysis

650

Amino Acids

75.13

Weight (kDa)

6.03

Isoelectric Point (pI)

51.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pro_isomerase	PF00160	4 - 159	5.8e-44	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
RRM_1	PF00076	245 - 315	2.8e-14	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005064)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53720 AT1G53720
fragaria_vesca	FvH4_3g15530 FvH4_3g15530 FvH4_3g15530 FvH4_3g21900 FvH4_4g19390
malus_domestica	MD05G1222400.v1.1 MD10G1204000.v1.1
prunus_persica	Prupe.4G137900_v2.0.a1
pyrus_communis	pycom05g20510 pycom10g17460 pycom10g17470
rosa_chinensis	RchiOBHm_Chr5g0026161
rosa_laevigata	RLG00000032908
rosa_multiflora	Rmu_sc0009679.1_g000004
rosa_roxburghii	Rroxscaffold_1G00053040 Rroxscaffold_1G00053150
rosa_rugosa	Rorug05G0091100 Rorug05G0091200 Rorug05G0091300 Rorug05G0091400 Rorug05G0092300
rosa_samantha	Rh5AG184100 Rh5BG180900 Rh5BG182100 Rh5CG199900 Rh5CG201500 Rh5DG182500
rosa_wichuraiana	Rw5G016660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	834
Acc65I	GGTACC	1 cut(s)	598
AccB1I	GGYRCC	4 cut(s)	60, 598, 619, 1514
AciI	CCGC	4 cut(s)	719, 812, 1001, 1273
AclWI	GGATC	7 cut(s)	422, 485, 497, 1208, 1284, 1485, 1710
AcoI	YGGCCR	1 cut(s)	288
AcsI	RAATTY	4 cut(s)	203, 869, 939, 1796
AcuI	CTGAAG	1 cut(s)	1761
AdeI	CACNNNGTG	1 cut(s)	1124
AfaI	GTAC	5 cut(s)	50, 600, 678, 1097, 1657
AfiI	CCNNNNNNNGG	3 cut(s)	987, 1273, 1725
AgsI	TTSAA	9 cut(s)	88, 195, 259, 587, 875, 907, 1024, 1105, 1418
AhdI	GACNNNNNGTC	1 cut(s)	1316
AjiI	CACGTC	1 cut(s)	1814
AjnI	CCWGG	2 cut(s)	529, 622
AleI	CACNNNNGTG	1 cut(s)	1296
AluBI	AGCT	4 cut(s)	91, 631, 1474, 1763
AluI	AGCT	4 cut(s)	91, 631, 1474, 1763
Alw21I	GWGCWC	2 cut(s)	1036, 1061
Alw44I	GTGCAC	2 cut(s)	1032, 1057
AlwI	GGATC	7 cut(s)	422, 485, 497, 1208, 1284, 1485, 1710
AoxI	GGCC	1 cut(s)	288
ApaLI	GTGCAC	2 cut(s)	1032, 1057
ApeKI	GCWGC	2 cut(s)	1017, 1664
ApoI	RAATTY	4 cut(s)	203, 869, 939, 1796
Asp700I	GAANNNNTTC	2 cut(s)	178, 1905
Asp718I	GGTACC	1 cut(s)	598
AspLEI	GCGC	2 cut(s)	993, 1922
AspS9I	GGNCC	2 cut(s)	978, 1264
AsuC2I	CCSGG	1 cut(s)	542
AsuHPI	GGTGA	7 cut(s)	173, 200, 227, 248, 854, 1459, 1721
AvaII	GGWCC	2 cut(s)	978, 1264
AxyI	CCTNAGG	1 cut(s)	1443
BaeGI	GKGCMC	3 cut(s)	65, 1036, 1061
BalI	TGGCCA	1 cut(s)	290
BanI	GGYRCC	4 cut(s)	60, 598, 619, 1514
BbsI	GAAGAC	2 cut(s)	635, 1537
Bbv12I	GWGCWC	2 cut(s)	1036, 1061
BbvI	GCAGC	2 cut(s)	1004, 1676
BccI	CCATC	7 cut(s)	353, 904, 1147, 1157, 1505, 1532, 1700
BciT130I	CCWGG	2 cut(s)	531, 624
BciVI	GTATCC	1 cut(s)	1325
BclI	TGATCA	2 cut(s)	217, 1039
BcnI	CCSGG	1 cut(s)	542
BfaI	CTAG	2 cut(s)	347, 1143
BfmI	CTRYAG	1 cut(s)	1701
BfuI	GTATCC	1 cut(s)	1325
BisI	GCNGC	4 cut(s)	719, 813, 1018, 1665
BlsI	GCNGC	4 cut(s)	720, 814, 1019, 1666
Bme1390I	CCNGG	3 cut(s)	531, 542, 624
Bme18I	GGWCC	2 cut(s)	978, 1264
BmeRI	GACNNNNNGTC	1 cut(s)	1316
BmgBI	CACGTC	1 cut(s)	1814
BmgT120I	GGNCC	2 cut(s)	978, 1264
BmiI	GGNNCC	7 cut(s)	62, 181, 535, 600, 621, 980, 1516
BmrFI	CCNGG	3 cut(s)	531, 542, 624
BmsI	GCATC	2 cut(s)	646, 1420
BpiI	GAAGAC	2 cut(s)	635, 1537
BplI	GAGNNNNNCTC	2 cut(s)	291, 323
BpmI	CTGGAG	4 cut(s)	318, 552, 645, 1158
BpuEI	CTTGAG	4 cut(s)	653, 701, 747, 1279
BpuMI	CCSGG	1 cut(s)	542
BsaAI	YACGTR	3 cut(s)	827, 1099, 1659
BsaI	GGTCTC	1 cut(s)	1299
BsaJI	CCNNGG	2 cut(s)	285, 540
BsaWI	WCCGGW	1 cut(s)	182
Bsc4I	CCNNNNNNNGG	3 cut(s)	987, 1273, 1725
Bse1I	ACTGG	9 cut(s)	163, 175, 291, 666, 755, 844, 1066, 1074, 1904
Bse21I	CCTNAGG	1 cut(s)	1443
Bse3DI	GCAATG	2 cut(s)	332, 1044
BseBI	CCWGG	2 cut(s)	531, 624
BseDI	CCNNGG	2 cut(s)	285, 540
BseGI	GGATG	5 cut(s)	493, 565, 613, 1435, 1852
BseLI	CCNNNNNNNGG	3 cut(s)	987, 1273, 1725
BseMI	GCAATG	2 cut(s)	332, 1044
BseMII	CTCAG	4 cut(s)	332, 510, 1103, 1251
BseNI	ACTGG	9 cut(s)	163, 175, 291, 666, 755, 844, 1066, 1074, 1904
BseRI	GAGGAG	1 cut(s)	650
BseSI	GKGCMC	3 cut(s)	65, 1036, 1061
BseXI	GCAGC	2 cut(s)	1004, 1676
BsgI	GTGCAG	3 cut(s)	135, 1581, 1836
BshFI	GGCC	1 cut(s)	290
BshNI	GGYRCC	4 cut(s)	60, 598, 619, 1514
BsiHKAI	GWGCWC	2 cut(s)	1036, 1061
BsiSI	CCGG	2 cut(s)	183, 542
BslFI	GGGAC	1 cut(s)	964
BslI	CCNNNNNNNGG	3 cut(s)	987, 1273, 1725
BsmBI	CGTCTC	3 cut(s)	1585, 1782, 1804
BsmFI	GGGAC	1 cut(s)	964
BsnI	GGCC	1 cut(s)	290
Bso31I	GGTCTC	1 cut(s)	1299
Bsp1286I	GDGCHC	3 cut(s)	65, 1036, 1061
Bsp1407I	TGTACA	1 cut(s)	48
Bsp19I	CCATGG	1 cut(s)	285
BspACI	CCGC	4 cut(s)	719, 812, 1001, 1273
BspANI	GGCC	1 cut(s)	290
BspCNI	CTCAG	4 cut(s)	331, 511, 1102, 1252
BspLI	GGNNCC	7 cut(s)	62, 181, 535, 600, 621, 980, 1516
BspMAI	CTGCAG	1 cut(s)	1705
BspPI	GGATC	7 cut(s)	422, 485, 497, 1208, 1284, 1485, 1710
BspT107I	GGYRCC	4 cut(s)	60, 598, 619, 1514
BspTNI	GGTCTC	1 cut(s)	1299
BsrDI	GCAATG	2 cut(s)	332, 1044
BsrGI	TGTACA	1 cut(s)	48
BsrI	ACTGG	9 cut(s)	163, 175, 291, 666, 755, 844, 1066, 1074, 1904
BssECI	CCNNGG	2 cut(s)	285, 540
BssT1I	CCWWGG	1 cut(s)	285
Bst2UI	CCWGG	2 cut(s)	531, 624
Bst4CI	ACNGT	8 cut(s)	133, 373, 805, 848, 1316, 1358, 1376, 1655
Bst6I	CTCTTC	1 cut(s)	1591
BstAPI	GCANNNNNTGC	1 cut(s)	1017
BstAUI	TGTACA	1 cut(s)	48
BstBAI	YACGTR	3 cut(s)	827, 1099, 1659
BstC8I	GCNNGC	5 cut(s)	226, 264, 810, 1003, 1833
BstDEI	CTNAG	5 cut(s)	318, 519, 1089, 1260, 1443
BstDSI	CCRYGG	1 cut(s)	285
BstEII	GGTNACC	1 cut(s)	161
BstF5I	GGATG	5 cut(s)	493, 565, 613, 1435, 1852
BstHHI	GCGC	2 cut(s)	993, 1922
BstMWI	GCNNNNNNNGC	4 cut(s)	637, 656, 1017, 1828
BstNI	CCWGG	2 cut(s)	531, 624
BstNSI	RCATGY	3 cut(s)	266, 891, 1835
BstPI	GGTNACC	1 cut(s)	161
BstSCI	CCNGG	3 cut(s)	529, 540, 622
BstSFI	CTRYAG	1 cut(s)	1701
BstSLI	GKGCMC	3 cut(s)	65, 1036, 1061
BstSNI	TACGTA	2 cut(s)	1099, 1659
BstV1I	GCAGC	2 cut(s)	1004, 1676
BstV2I	GAAGAC	2 cut(s)	635, 1537
BstX2I	RGATCY	1 cut(s)	1715
BstYI	RGATCY	1 cut(s)	1715
Bsu36I	CCTNAGG	1 cut(s)	1443
BsuI	GTATCC	1 cut(s)	1325
BsuRI	GGCC	1 cut(s)	290
BtgI	CCRYGG	1 cut(s)	285
BtrI	CACGTC	1 cut(s)	1814
BtsCI	GGATG	5 cut(s)	493, 565, 613, 1435, 1852
BtsIMutI	CAGTG	5 cut(s)	12, 298, 673, 1059, 1321
Cac8I	GCNNGC	5 cut(s)	226, 264, 810, 1003, 1833
CfoI	GCGC	2 cut(s)	993, 1922
Cfr13I	GGNCC	2 cut(s)	978, 1264
CseI	GACGC	2 cut(s)	569, 629
Csp6I	GTAC	5 cut(s)	49, 599, 677, 1096, 1656
CviAII	CATG	8 cut(s)	263, 286, 888, 944, 1211, 1535, 1823, 1832
CviQI	GTAC	5 cut(s)	49, 599, 677, 1096, 1656
DdeI	CTNAG	5 cut(s)	318, 519, 1089, 1260, 1443
DraIII	CACNNNGTG	1 cut(s)	1124
DriI	GACNNNNNGTC	1 cut(s)	1316
EaeI	YGGCCR	1 cut(s)	288
Eam1104I	CTCTTC	1 cut(s)	1591
Eam1105I	GACNNNNNGTC	1 cut(s)	1316
EarI	CTCTTC	1 cut(s)	1591
Eco105I	TACGTA	2 cut(s)	1099, 1659
Eco130I	CCWWGG	1 cut(s)	285
Eco31I	GGTCTC	1 cut(s)	1299
Eco47I	GGWCC	2 cut(s)	978, 1264
Eco57I	CTGAAG	1 cut(s)	1761
Eco81I	CCTNAGG	1 cut(s)	1443
Eco91I	GGTNACC	1 cut(s)	161
EcoO65I	GGTNACC	1 cut(s)	161
EcoRI	GAATTC	1 cut(s)	939
EcoRII	CCWGG	2 cut(s)	529, 622
EcoT14I	CCWWGG	1 cut(s)	285
ErhI	CCWWGG	1 cut(s)	285
Esp3I	CGTCTC	3 cut(s)	1585, 1782, 1804
FaeI	CATG	8 cut(s)	266, 289, 891, 947, 1214, 1538, 1826, 1835
FalI	AAGNNNNNCTT	2 cut(s)	68, 100
FaqI	GGGAC	1 cut(s)	964
FatI	CATG	8 cut(s)	262, 285, 887, 943, 1210, 1534, 1822, 1831
FauI	CCCGC	2 cut(s)	994, 1266
FbaI	TGATCA	2 cut(s)	217, 1039
Fnu4HI	GCNGC	4 cut(s)	719, 813, 1018, 1665
FokI	GGATG	5 cut(s)	500, 572, 620, 1442, 1859
Fsp4HI	GCNGC	4 cut(s)	719, 813, 1018, 1665
FspBI	CTAG	2 cut(s)	347, 1143
GlaI	GCGC	2 cut(s)	992, 1921
GluI	GCNGC	4 cut(s)	719, 813, 1018, 1665
GsuI	CTGGAG	4 cut(s)	318, 552, 645, 1158
HaeIII	GGCC	1 cut(s)	290
HapII	CCGG	2 cut(s)	183, 542
HgaI	GACGC	2 cut(s)	569, 629
HhaI	GCGC	2 cut(s)	993, 1922
Hin1II	CATG	8 cut(s)	266, 289, 891, 947, 1214, 1538, 1826, 1835
Hin6I	GCGC	2 cut(s)	991, 1920
HinP1I	GCGC	2 cut(s)	991, 1920
HinfI	GANTC	7 cut(s)	191, 244, 304, 465, 751, 1343, 1402
HpaII	CCGG	2 cut(s)	183, 542
HphI	GGTGA	7 cut(s)	173, 200, 227, 248, 854, 1459, 1721
Hpy166II	GTNNAC	8 cut(s)	51, 433, 746, 780, 893, 1034, 1059, 1079
Hpy188I	TCNGA	6 cut(s)	520, 960, 1092, 1261, 1322, 1780
Hpy8I	GTNNAC	8 cut(s)	51, 433, 746, 780, 893, 1034, 1059, 1079
HpyAV	CCTTC	8 cut(s)	133, 539, 1263, 1392, 1412, 1785, 1921, 1941
HpyCH4III	ACNGT	8 cut(s)	133, 373, 805, 848, 1316, 1358, 1376, 1655
HpyCH4IV	ACGT	4 cut(s)	826, 1098, 1658, 1813
HpyF10VI	GCNNNNNNNGC	4 cut(s)	637, 656, 1017, 1828
HpyF3I	CTNAG	5 cut(s)	318, 519, 1089, 1260, 1443
HpySE526I	ACGT	4 cut(s)	826, 1098, 1658, 1813
Hsp92II	CATG	8 cut(s)	266, 289, 891, 947, 1214, 1538, 1826, 1835
HspAI	GCGC	2 cut(s)	991, 1920
KpnI	GGTACC	1 cut(s)	602
Ksp22I	TGATCA	2 cut(s)	217, 1039
LmnI	GCTCC	2 cut(s)	533, 637
Lsp1109I	GCAGC	2 cut(s)	1004, 1676
LweI	GCATC	2 cut(s)	646, 1420
MaeI	CTAG	2 cut(s)	347, 1143
MaeII	ACGT	4 cut(s)	826, 1098, 1658, 1813
MaeIII	GTNAC	5 cut(s)	16, 161, 236, 757, 842
MfeI	CAATTG	1 cut(s)	279
MflI	RGATCY	1 cut(s)	1715
MhlI	GDGCHC	3 cut(s)	65, 1036, 1061
MlsI	TGGCCA	1 cut(s)	290
MluNI	TGGCCA	1 cut(s)	290
MlyI	GAGTC	1 cut(s)	1411
MmeI	TCCRAC	1 cut(s)	378
Mox20I	TGGCCA	1 cut(s)	290
MroXI	GAANNNNTTC	2 cut(s)	178, 1905
MscI	TGGCCA	1 cut(s)	290
MseI	TTAA	2 cut(s)	524, 1221
MslI	CAYNNNNRTG	2 cut(s)	666, 1296
Msp20I	TGGCCA	1 cut(s)	290
MspI	CCGG	2 cut(s)	183, 542
MspR9I	CCNGG	3 cut(s)	531, 542, 624
MunI	CAATTG	1 cut(s)	279
MvaI	CCWGG	2 cut(s)	531, 624
MwoI	GCNNNNNNNGC	4 cut(s)	637, 656, 1017, 1828
NciI	CCSGG	1 cut(s)	542
NcoI	CCATGG	1 cut(s)	285
NlaIII	CATG	8 cut(s)	266, 289, 891, 947, 1214, 1538, 1826, 1835
NlaIV	GGNNCC	7 cut(s)	62, 181, 535, 600, 621, 980, 1516
NmuCI	GTSAC	5 cut(s)	16, 161, 236, 757, 842
NspI	RCATGY	3 cut(s)	266, 891, 1835
OliI	CACNNNNGTG	1 cut(s)	1296
PaeI	GCATGC	2 cut(s)	266, 1835
PdmI	GAANNNNTTC	2 cut(s)	178, 1905
PfeI	GAWTC	6 cut(s)	191, 244, 304, 465, 751, 1343
PfoI	TCCNGGA	1 cut(s)	529
PkrI	GCNGC	4 cut(s)	720, 814, 1019, 1666
PleI	GAGTC	1 cut(s)	1410
PpsI	GAGTC	1 cut(s)	1410
Ppu21I	YACGTR	3 cut(s)	827, 1099, 1659
PsiI	TTATAA	1 cut(s)	834
Psp6I	CCWGG	2 cut(s)	529, 622
PspEI	GGTNACC	1 cut(s)	161
PspGI	CCWGG	2 cut(s)	529, 622
PspN4I	GGNNCC	7 cut(s)	62, 181, 535, 600, 621, 980, 1516
PspPI	GGNCC	2 cut(s)	978, 1264
PstI	CTGCAG	1 cut(s)	1705
PsuI	RGATCY	1 cut(s)	1715
RsaI	GTAC	5 cut(s)	50, 600, 678, 1097, 1657
RsaNI	GTAC	5 cut(s)	49, 599, 677, 1096, 1656
RseI	CAYNNNNRTG	2 cut(s)	666, 1296
SaqAI	TTAA	2 cut(s)	524, 1221
SatI	GCNGC	4 cut(s)	719, 813, 1018, 1665
Sau96I	GGNCC	2 cut(s)	978, 1264
SchI	GAGTC	1 cut(s)	1411
ScrFI	CCNGG	3 cut(s)	531, 542, 624
SduI	GDGCHC	3 cut(s)	65, 1036, 1061
SfaNI	GCATC	2 cut(s)	646, 1420
SfcI	CTRYAG	1 cut(s)	1701
SinI	GGWCC	2 cut(s)	978, 1264
SmiMI	CAYNNNNRTG	2 cut(s)	666, 1296
SmlI	CTYRAG	4 cut(s)	632, 680, 762, 1294
SmoI	CTYRAG	4 cut(s)	632, 680, 762, 1294
SnaBI	TACGTA	2 cut(s)	1099, 1659
SphI	GCATGC	2 cut(s)	266, 1835
SsiI	CCGC	4 cut(s)	719, 812, 1001, 1273
SspI	AATATT	2 cut(s)	460, 1615
SspMI	CTAG	2 cut(s)	347, 1143
StyD4I	CCNGG	3 cut(s)	529, 540, 622
StyI	CCWWGG	1 cut(s)	285
TaaI	ACNGT	8 cut(s)	133, 373, 805, 848, 1316, 1358, 1376, 1655
TaiI	ACGT	4 cut(s)	829, 1101, 1661, 1816
TaqI	TCGA	5 cut(s)	357, 1351, 1369, 1387, 1408
TaqII	GACCGA	3 cut(s)	948, 1281, 1323
TatI	WGTACW	2 cut(s)	48, 676
TauI	GCSGC	2 cut(s)	721, 815
TfiI	GAWTC	6 cut(s)	191, 244, 304, 465, 751, 1343
Tru1I	TTAA	2 cut(s)	524, 1221
Tru9I	TTAA	2 cut(s)	524, 1221
TscAI	CASTG	5 cut(s)	12, 298, 673, 1066, 1321
TseFI	GTSAC	5 cut(s)	16, 161, 236, 757, 842
TseI	GCWGC	2 cut(s)	1017, 1664
Tsp45I	GTSAC	5 cut(s)	16, 161, 236, 757, 842
TspDTI	ATGAA	9 cut(s)	236, 624, 853, 932, 1259, 1695, 1809, 1898, 1914
TspRI	CASTG	5 cut(s)	12, 298, 673, 1066, 1321
VneI	GTGCAC	2 cut(s)	1032, 1057
VpaK11BI	GGWCC	2 cut(s)	978, 1264
XapI	RAATTY	4 cut(s)	203, 869, 939, 1796
XbaI	TCTAGA	1 cut(s)	346
XceI	RCATGY	3 cut(s)	266, 891, 1835
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1628
XmnI	GAANNNNTTC	2 cut(s)	178, 1905
XspI	CTAG	2 cut(s)	347, 1143

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.