Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0005064

Physical Location & Seq

Genomic Coordinates Forward (+)

35494362 .. 35501420

Gene Structure 7059 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1222400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1926 bp

ATGTCAGTGCTTATAGTGACAAGCTTAGGGGAGATAGTTGTGGATTTGCATACAGACAAGTGCCCTCTCACTTGTAAAAACTTCTTGAAGCTCTGCAAGATAAAGTATTATAATGGGTGCCTTTTTCACACGGTTCAGAAGGATTTCACTGCACAGACTGGTGACCCAACTGGAACGGGTTCAGGTGGCGATTCAGTTTACAAATTTTTATATGGTGATCAGGCTCGCTTTTTCAACGATGAGATTCATCTTGATTTGAAGCATTCTAAGACAGGCACTGTTGCGATGGCTAGTGCTGGAGAGAATCTCAATGCTTCTCAGTTCTACTTGACATTGCGTGATGATCTTGAGTACCTCGATGGGAAGCACACGGTTTTTGGTGAGATAGCAGAGGGGTTTGAGACATTGACAAGGATCAATGAGGCTTATGTGGATGAGATCAACCGACCCTATAAAAATATCCGAATCAAACATACTTACATATTGGATGACCCTTTTGATGATCCTTCACAACTAGCTGAGTTAATTCCTGACGCCTCCCCTGAAGGAAAACCAAAGGATGAGGTTGATGATAATGTGCGGCTTGAAGATGATTGGGTTCCTCTGGATGAACAATTAGGTCCACAAGAACTTGAAGAGCGTCTTCGTGCCAAAGACGCACATTCCAGTGCGGTTGTGCTAGAGAGTATTGGGGATATTCCTGATGTTGAGATAAAACCTCCCGACAATGTGCTTTTTGTTTGTAAATTGAATCCAGTCACTGAAGATGAGGATTTGCACACAATTTTTTCGCGTTTTGGAACTGTTCAAGCGGCTGATATAATTCGTGATTTCAAGACTGGAGATAGCTTATGCTATGCATTCATAGAATTTGAGACCAGAGAAGCATGCGAACAAGCATATTTTAAGATGGATAATGCTTTGATTGACGACCGGAGAATACATGTGGATTTTAGTCAAAGTGTTGCAAAACTGTGGTCCCAGTACAGGCGCAAAGATCAAAATGGCAAAGGCAAAGGTTGCTTCAAATGTGGTGCACTTGATCACATTGCCAAGGATTGCACCGGTGATCCTGCCAACAAACAGCAACCTCAAAAGTACATATTGAAGGATGATAATGTACAGCGTGGTGGTGGCAAAAACTCCAGTTATGATATGGTATTTGATGGAGACACTCCAGAAAGTCCAAGGCAAGAGAAGAGAAGTCAGGGTCACAATAATGACCGTGGACTTGAGAAACAAAGGATGAATAGGCAGAGTTCCGAGGACCTAAGGCGTAGGGATCGAGAAAATAAAGACTCAAGTTATAGGGAGAGGCACAGTGACAGAAGTAGAGGGTACATAGAGGATTCAAGTCGAGACAGTAAAGCAAATCGATCCAGTGGAAGCAGAAGTGGTCGAGATCATCTTGAAGAGGGAAGGGATAGAGAAAGGCGTAAGGACAGACAAAGAGACACAGATGATAAAACAGATCAGCGTGAGAGCAGATATGGAGATGATACCTATGCAGACAGGAGGGGTGATAGAGATTACAGAAAGAGGAGTGCAGATAGTGATAGAGAGAATCATAAGGAGAGGCAGGGAAATATAGATGATAAGATCGATCAGCTGGGGAGTGGAAAGAGAAATGCAGATGGTGGTGAGAGGGGTGAGGTAAAATACAGGAGTGCAGATAGTGATAGACTAGCGGAACGGAGTAGTGACAGAGAGTACAGAAAGAGAAGTGCAGCTGATGATAGCCTTCGAGAAAAGAGGGACAATGGAGATTATAGAAAGAGAAGTGTAGAGAGGAGGGATGAAACAGACTATAAAAAGAGGCATGCAGATGGTGACCGTCGAGACAAGAGAGACGAGCCAGTCCATAAGAAAAGAAGTGCAGATGTTGATGCCTATAGAGCTACAAGGGATAGAGAACATAGAAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000413 GO:0001932 GO:0003674 GO:0003676 GO:0003723 GO:0003755 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0006357 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019219 GO:0019220 GO:0019222 GO:0019538 GO:0031323 GO:0031326 GO:0031399 GO:0032268 GO:0036211 GO:0042325 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051174 GO:0051246 GO:0051252 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0097159 GO:0140096 GO:1901363 GO:1901407 GO:1901564 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pro_isomerase RRM_1 zf-CCHC

Protein Analysis

642

Amino Acids

74.0

Weight (kDa)

5.84

Isoelectric Point (pI)

50.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pro_isomerase	PF00160	4 - 159	1.6e-44	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
RRM_1	PF00076	245 - 315	4.2e-15	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005064)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53720 AT1G53720
fragaria_vesca	FvH4_3g15530 FvH4_3g15530 FvH4_3g15530 FvH4_3g21900 FvH4_4g19390
malus_domestica	MD05G1222400.v1.1 MD10G1204000.v1.1
prunus_persica	Prupe.4G137900_v2.0.a1
pyrus_communis	pycom05g20510 pycom10g17460 pycom10g17470
rosa_chinensis	RchiOBHm_Chr5g0026161
rosa_laevigata	RLG00000032908
rosa_multiflora	Rmu_sc0009679.1_g000004
rosa_roxburghii	Rroxscaffold_1G00053040 Rroxscaffold_1G00053150
rosa_rugosa	Rorug05G0091100 Rorug05G0091200 Rorug05G0091300 Rorug05G0091400 Rorug05G0092300
rosa_samantha	Rh5AG184100 Rh5BG180900 Rh5BG182100 Rh5CG199900 Rh5CG201500 Rh5DG182500
rosa_wichuraiana	Rw5G016660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	111
AasI	GACNNNNNNGTC	1 cut(s)	1856
AccB1I	GGYRCC	1 cut(s)	117
AccII	CGCG	1 cut(s)	793
AciI	CCGC	4 cut(s)	580, 671, 812, 1688
AclWI	GGATC	5 cut(s)	422, 497, 1064, 1290, 1371
AcsI	RAATTY	2 cut(s)	203, 869
AcuI	CTGAAG	2 cut(s)	564, 783
AcyI	GRCGYC	1 cut(s)	534
AfaI	GTAC	6 cut(s)	353, 986, 1100, 1122, 1340, 1712
AfiI	CCNNNNNNNGG	1 cut(s)	987
AflIII	ACRYGT	1 cut(s)	943
AgeI	ACCGGT	1 cut(s)	1064
AluBI	AGCT	7 cut(s)	24, 91, 518, 849, 1609, 1730, 1898
AluI	AGCT	7 cut(s)	24, 91, 518, 849, 1609, 1730, 1898
Alw21I	GWGCWC	1 cut(s)	1039
Alw26I	GTCTC	7 cut(s)	395, 869, 1164, 1353, 1446, 1833, 1842
Alw44I	GTGCAC	1 cut(s)	1035
AlwI	GGATC	5 cut(s)	422, 497, 1064, 1290, 1371
AlwNI	CAGNNNCTG	2 cut(s)	278, 761
ApaLI	GTGCAC	1 cut(s)	1035
ApeKI	GCWGC	1 cut(s)	1727
ApoI	RAATTY	2 cut(s)	203, 869
ArsI	GACNNNNNNTTYG	2 cut(s)	962, 994
AsiGI	ACCGGT	1 cut(s)	1064
Asp700I	GAANNNNTTC	2 cut(s)	143, 178
AspLEI	GCGC	1 cut(s)	993
AspS9I	GGNCC	3 cut(s)	620, 978, 1267
AsuHPI	GGTGA	8 cut(s)	173, 227, 392, 1079, 1532, 1652, 1661, 1841
AvaII	GGWCC	3 cut(s)	620, 978, 1267
AxyI	CCTNAGG	1 cut(s)	1271
BaeGI	GKGCMC	2 cut(s)	65, 1039
BanI	GGYRCC	1 cut(s)	117
BbsI	GAAGAC	1 cut(s)	635
Bbv12I	GWGCWC	1 cut(s)	1039
BbvI	GCAGC	1 cut(s)	1739
BccI	CCATC	6 cut(s)	280, 353, 904, 1160, 1628, 1820
BclI	TGATCA	2 cut(s)	217, 1042
BcoDI	GTCTC	7 cut(s)	395, 869, 1164, 1353, 1446, 1833, 1842
BfaI	CTAG	4 cut(s)	291, 515, 680, 1685
BfmI	CTRYAG	1 cut(s)	1891
BisI	GCNGC	3 cut(s)	581, 813, 1728
BlsI	GCNGC	3 cut(s)	582, 814, 1729
Bme18I	GGWCC	3 cut(s)	620, 978, 1267
BmgT120I	GGNCC	3 cut(s)	620, 978, 1267
BmiI	GGNNCC	3 cut(s)	119, 600, 980
BmrI	ACTGGG	1 cut(s)	976
BmsI	GCATC	1 cut(s)	1876
BmuI	ACTGGG	1 cut(s)	976
BpiI	GAAGAC	1 cut(s)	635
BplI	GAGNNNNNCTC	2 cut(s)	291, 323
BpmI	CTGGAG	4 cut(s)	318, 861, 1129, 1161
Bpu10I	CCTNAGC	1 cut(s)	25
BpuEI	CTTGAG	3 cut(s)	368, 1253, 1285
Bsa29I	ATCGAT	2 cut(s)	1375, 1602
BsaHI	GRCGYC	1 cut(s)	534
BsaI	GGTCTC	1 cut(s)	869
BsaJI	CCNNGG	4 cut(s)	1053, 1187, 1225, 1263
BsaWI	WCCGGW	2 cut(s)	933, 1064
Bsc4I	CCNNNNNNNGG	1 cut(s)	987
Bse118I	RCCGGY	1 cut(s)	1064
Bse1I	ACTGG	9 cut(s)	163, 175, 666, 755, 844, 982, 1146, 1380, 1856
Bse21I	CCTNAGG	1 cut(s)	1271
Bse3DI	GCAATG	2 cut(s)	332, 1047
BseCI	ATCGAT	2 cut(s)	1375, 1602
BseDI	CCNNGG	4 cut(s)	1053, 1187, 1225, 1263
BseGI	GGATG	7 cut(s)	439, 493, 565, 613, 1117, 1251, 1801
BseLI	CCNNNNNNNGG	1 cut(s)	987
BseMI	GCAATG	2 cut(s)	332, 1047
BseMII	CTCAG	2 cut(s)	332, 510
BseNI	ACTGG	9 cut(s)	163, 175, 666, 755, 844, 982, 1146, 1380, 1856
BseRI	GAGGAG	2 cut(s)	1555, 1804
BseSI	GKGCMC	2 cut(s)	65, 1039
BseXI	GCAGC	1 cut(s)	1739
BseYI	CCCAGC	1 cut(s)	1609
BsgI	GTGCAG	5 cut(s)	135, 1566, 1689, 1746, 1896
Bsh1236I	CGCG	1 cut(s)	793
Bsh1285I	CGRYCG	1 cut(s)	934
BshNI	GGYRCC	1 cut(s)	117
BshTI	ACCGGT	1 cut(s)	1064
BshVI	ATCGAT	2 cut(s)	1375, 1602
BsiEI	CGRYCG	1 cut(s)	934
BsiHKAI	GWGCWC	1 cut(s)	1039
BsiSI	CCGG	2 cut(s)	934, 1065
BslFI	GGGAC	2 cut(s)	964, 1769
BslI	CCNNNNNNNGG	1 cut(s)	987
BsmAI	GTCTC	7 cut(s)	395, 869, 1164, 1353, 1446, 1833, 1842
BsmBI	CGTCTC	1 cut(s)	1842
BsmFI	GGGAC	2 cut(s)	964, 1769
BsmI	GAATGC	2 cut(s)	262, 860
Bso31I	GGTCTC	1 cut(s)	869
Bsp1286I	GDGCHC	2 cut(s)	65, 1039
Bsp1407I	TGTACA	1 cut(s)	1120
BspACI	CCGC	4 cut(s)	580, 671, 812, 1688
BspCNI	CTCAG	2 cut(s)	331, 511
BspDI	ATCGAT	2 cut(s)	1375, 1602
BspFNI	CGCG	1 cut(s)	793
BspLI	GGNNCC	3 cut(s)	119, 600, 980
BspPI	GGATC	5 cut(s)	422, 497, 1064, 1290, 1371
BspQI	GCTCTTC	1 cut(s)	630
BspT107I	GGYRCC	1 cut(s)	117
BspTNI	GGTCTC	1 cut(s)	869
BsrDI	GCAATG	2 cut(s)	332, 1047
BsrFI	RCCGGY	1 cut(s)	1064
BsrGI	TGTACA	1 cut(s)	1120
BsrI	ACTGG	9 cut(s)	163, 175, 666, 755, 844, 982, 1146, 1380, 1856
BssAI	RCCGGY	1 cut(s)	1064
BssECI	CCNNGG	4 cut(s)	1053, 1187, 1225, 1263
BssNI	GRCGYC	1 cut(s)	534
BssT1I	CCWWGG	2 cut(s)	1053, 1187
Bst4CI	ACNGT	9 cut(s)	133, 280, 373, 805, 975, 1226, 1322, 1364, 1835
Bst6I	CTCTTC	3 cut(s)	630, 1193, 1407
BstACI	GRCGYC	1 cut(s)	534
BstAPI	GCANNNNNTGC	1 cut(s)	1020
BstAUI	TGTACA	1 cut(s)	1120
BstC8I	GCNNGC	3 cut(s)	226, 889, 1821
BstDEI	CTNAG	5 cut(s)	25, 267, 318, 519, 1271
BstDSI	CCRYGG	1 cut(s)	1225
BstEII	GGTNACC	2 cut(s)	161, 1829
BstF5I	GGATG	7 cut(s)	439, 493, 565, 613, 1117, 1251, 1801
BstFNI	CGCG	1 cut(s)	793
BstHHI	GCGC	1 cut(s)	993
BstMAI	GTCTC	7 cut(s)	395, 869, 1164, 1353, 1446, 1833, 1842
BstMCI	CGRYCG	1 cut(s)	934
BstMWI	GCNNNNNNNGC	3 cut(s)	656, 1020, 1895
BstNSI	RCATGY	3 cut(s)	891, 947, 1823
BstPI	GGTNACC	2 cut(s)	161, 1829
BstSFI	CTRYAG	1 cut(s)	1891
BstSLI	GKGCMC	2 cut(s)	65, 1039
BstUI	CGCG	1 cut(s)	793
BstV1I	GCAGC	1 cut(s)	1739
BstV2I	GAAGAC	1 cut(s)	635
Bsu15I	ATCGAT	2 cut(s)	1375, 1602
Bsu36I	CCTNAGG	1 cut(s)	1271
BsuTUI	ATCGAT	2 cut(s)	1375, 1602
BtgI	CCRYGG	1 cut(s)	1225
BtgZI	GCGATG	1 cut(s)	299
BtsCI	GGATG	7 cut(s)	439, 493, 565, 613, 1117, 1251, 1801
BtsI	GCAGTG	1 cut(s)	147
BtsIMutI	CAGTG	7 cut(s)	12, 147, 276, 673, 759, 1327, 1387
Cac8I	GCNNGC	3 cut(s)	226, 889, 1821
CaiI	CAGNNNCTG	2 cut(s)	278, 761
CfoI	GCGC	1 cut(s)	993
Cfr10I	RCCGGY	1 cut(s)	1064
Cfr13I	GGNCC	3 cut(s)	620, 978, 1267
ClaI	ATCGAT	2 cut(s)	1375, 1602
CseI	GACGC	3 cut(s)	542, 629, 665
Csp6I	GTAC	6 cut(s)	352, 985, 1099, 1121, 1339, 1711
CspAI	ACCGGT	1 cut(s)	1064
CviAII	CATG	3 cut(s)	888, 944, 1820
CviQI	GTAC	6 cut(s)	352, 985, 1099, 1121, 1339, 1711
DdeI	CTNAG	5 cut(s)	25, 267, 318, 519, 1271
DrdI	GACNNNNNNGTC	1 cut(s)	1856
DseDI	GACNNNNNNGTC	1 cut(s)	1856
Eam1104I	CTCTTC	3 cut(s)	630, 1193, 1407
EarI	CTCTTC	3 cut(s)	630, 1193, 1407
Eco130I	CCWWGG	2 cut(s)	1053, 1187
Eco31I	GGTCTC	1 cut(s)	869
Eco47I	GGWCC	3 cut(s)	620, 978, 1267
Eco57I	CTGAAG	2 cut(s)	564, 783
Eco81I	CCTNAGG	1 cut(s)	1271
Eco91I	GGTNACC	2 cut(s)	161, 1829
EcoO109I	RGGNCCY	1 cut(s)	1267
EcoO65I	GGTNACC	2 cut(s)	161, 1829
EcoT14I	CCWWGG	2 cut(s)	1053, 1187
EcoT22I	ATGCAT	1 cut(s)	862
ErhI	CCWWGG	2 cut(s)	1053, 1187
Esp3I	CGTCTC	1 cut(s)	1842
FaeI	CATG	3 cut(s)	891, 947, 1823
FalI	AAGNNNNNCTT	2 cut(s)	627, 659
FaqI	GGGAC	2 cut(s)	964, 1769
FatI	CATG	3 cut(s)	887, 943, 1819
FbaI	TGATCA	2 cut(s)	217, 1042
Fnu4HI	GCNGC	3 cut(s)	581, 813, 1728
FokI	GGATG	7 cut(s)	446, 500, 572, 620, 1124, 1258, 1808
Fsp4HI	GCNGC	3 cut(s)	581, 813, 1728
FspBI	CTAG	4 cut(s)	291, 515, 680, 1685
GlaI	GCGC	1 cut(s)	992
GluI	GCNGC	3 cut(s)	581, 813, 1728
GsaI	CCCAGC	1 cut(s)	1613
GsuI	CTGGAG	4 cut(s)	318, 861, 1129, 1161
HapII	CCGG	2 cut(s)	934, 1065
HgaI	GACGC	3 cut(s)	542, 629, 665
HhaI	GCGC	1 cut(s)	993
Hin1I	GRCGYC	1 cut(s)	534
Hin1II	CATG	3 cut(s)	891, 947, 1823
Hin6I	GCGC	1 cut(s)	991
HinP1I	GCGC	1 cut(s)	991
HindIII	AAGCTT	1 cut(s)	22
HinfI	GANTC	8 cut(s)	191, 244, 304, 465, 751, 1298, 1349, 1564
HpaII	CCGG	2 cut(s)	934, 1065
HphI	GGTGA	8 cut(s)	173, 227, 392, 1079, 1532, 1652, 1661, 1841
Hpy166II	GTNNAC	4 cut(s)	199, 623, 1037, 1229
Hpy188I	TCNGA	3 cut(s)	138, 464, 1264
Hpy8I	GTNNAC	4 cut(s)	199, 623, 1037, 1229
Hpy99I	CGWCG	1 cut(s)	1839
HpyAV	CCTTC	7 cut(s)	133, 516, 539, 1102, 1413, 1751, 1914
HpyCH4III	ACNGT	9 cut(s)	133, 280, 373, 805, 975, 1226, 1322, 1364, 1835
HpyF10VI	GCNNNNNNNGC	3 cut(s)	656, 1020, 1895
HpyF3I	CTNAG	5 cut(s)	25, 267, 318, 519, 1271
Hsp92I	GRCGYC	1 cut(s)	534
Hsp92II	CATG	3 cut(s)	891, 947, 1823
HspAI	GCGC	1 cut(s)	991
Ksp22I	TGATCA	2 cut(s)	217, 1042
LguI	GCTCTTC	1 cut(s)	630
Lsp1109I	GCAGC	1 cut(s)	1739
LweI	GCATC	1 cut(s)	1876
MaeI	CTAG	4 cut(s)	291, 515, 680, 1685
MaeIII	GTNAC	7 cut(s)	16, 161, 757, 1211, 1322, 1700, 1829
MboII	GAAGA	6 cut(s)	599, 635, 647, 776, 1210, 1424
MhlI	GDGCHC	2 cut(s)	65, 1039
MluCI	AATT	7 cut(s)	203, 525, 614, 746, 783, 822, 869
MlyI	GAGTC	1 cut(s)	1292
Mph1103I	ATGCAT	1 cut(s)	862
MroXI	GAANNNNTTC	2 cut(s)	143, 178
MseI	TTAA	2 cut(s)	524, 906
MslI	CAYNNNNRTG	3 cut(s)	666, 1218, 1824
MspA1I	CMGCKG	2 cut(s)	1609, 1730
MspI	CCGG	2 cut(s)	934, 1065
Mva1269I	GAATGC	2 cut(s)	262, 860
MvnI	CGCG	1 cut(s)	793
MwoI	GCNNNNNNNGC	3 cut(s)	656, 1020, 1895
NlaIII	CATG	3 cut(s)	891, 947, 1823
NlaIV	GGNNCC	3 cut(s)	119, 600, 980
NmuCI	GTSAC	7 cut(s)	16, 161, 757, 1211, 1322, 1700, 1829
NsiI	ATGCAT	1 cut(s)	862
NspI	RCATGY	3 cut(s)	891, 947, 1823
PaeI	GCATGC	2 cut(s)	891, 1823
PciI	ACATGT	1 cut(s)	943
PciSI	GCTCTTC	1 cut(s)	630
PctI	GAATGC	2 cut(s)	262, 860
PdmI	GAANNNNTTC	2 cut(s)	143, 178
PfeI	GAWTC	7 cut(s)	191, 244, 304, 465, 751, 1349, 1564
PinAI	ACCGGT	1 cut(s)	1064
PkrI	GCNGC	3 cut(s)	582, 814, 1729
PleI	GAGTC	1 cut(s)	1292
PpsI	GAGTC	1 cut(s)	1292
PpuMI	RGGWCCY	1 cut(s)	1267
PscI	ACATGT	1 cut(s)	943
PsiI	TTATAA	1 cut(s)	111
Psp5II	RGGWCCY	1 cut(s)	1267
PspEI	GGTNACC	2 cut(s)	161, 1829
PspFI	CCCAGC	1 cut(s)	1609
PspN4I	GGNNCC	3 cut(s)	119, 600, 980
PspPI	GGNCC	3 cut(s)	620, 978, 1267
PspPPI	RGGWCCY	1 cut(s)	1267
PstNI	CAGNNNCTG	2 cut(s)	278, 761
PvuII	CAGCTG	2 cut(s)	1609, 1730
RsaI	GTAC	6 cut(s)	353, 986, 1100, 1122, 1340, 1712
RsaNI	GTAC	6 cut(s)	352, 985, 1099, 1121, 1339, 1711
RseI	CAYNNNNRTG	3 cut(s)	666, 1218, 1824
SapI	GCTCTTC	1 cut(s)	630
SaqAI	TTAA	2 cut(s)	524, 906
SatI	GCNGC	3 cut(s)	581, 813, 1728
Sau96I	GGNCC	3 cut(s)	620, 978, 1267
SchI	GAGTC	1 cut(s)	1292
SduI	GDGCHC	2 cut(s)	65, 1039
SfaNI	GCATC	1 cut(s)	1876
SfcI	CTRYAG	1 cut(s)	1891
SgrAI	CRCCGGYG	1 cut(s)	1064
SinI	GGWCC	3 cut(s)	620, 978, 1267
SmiMI	CAYNNNNRTG	3 cut(s)	666, 1218, 1824
SmlI	CTYRAG	3 cut(s)	347, 1232, 1300
SmoI	CTYRAG	3 cut(s)	347, 1232, 1300
SphI	GCATGC	2 cut(s)	891, 1823
Sse9I	AATT	7 cut(s)	203, 525, 614, 746, 783, 822, 869
SsiI	CCGC	4 cut(s)	580, 671, 812, 1688
SspMI	CTAG	4 cut(s)	291, 515, 680, 1685
StyI	CCWWGG	2 cut(s)	1053, 1187
TaaI	ACNGT	9 cut(s)	133, 280, 373, 805, 975, 1226, 1322, 1364, 1835
TaqI	TCGA	8 cut(s)	357, 1285, 1357, 1375, 1399, 1602, 1744, 1837
TasI	AATT	7 cut(s)	203, 525, 614, 746, 783, 822, 869
TatI	WGTACW	4 cut(s)	984, 1098, 1120, 1710
TauI	GCSGC	2 cut(s)	583, 815
TfiI	GAWTC	7 cut(s)	191, 244, 304, 465, 751, 1349, 1564
Tru1I	TTAA	2 cut(s)	524, 906
Tru9I	TTAA	2 cut(s)	524, 906
TscAI	CASTG	7 cut(s)	12, 154, 283, 673, 766, 1327, 1387
TseFI	GTSAC	7 cut(s)	16, 161, 757, 1211, 1322, 1700, 1829
TseI	GCWGC	1 cut(s)	1727
Tsp45I	GTSAC	7 cut(s)	16, 161, 757, 1211, 1322, 1700, 1829
TspDTI	ATGAA	5 cut(s)	236, 624, 853, 1262, 1812
TspGWI	ACGGA	1 cut(s)	1708
TspRI	CASTG	7 cut(s)	12, 154, 283, 673, 766, 1327, 1387
VneI	GTGCAC	1 cut(s)	1035
VpaK11BI	GGWCC	3 cut(s)	620, 978, 1267
XapI	RAATTY	2 cut(s)	203, 869
XceI	RCATGY	3 cut(s)	891, 947, 1823
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1153
XmnI	GAANNNNTTC	2 cut(s)	143, 178
XspI	CTAG	4 cut(s)	291, 515, 680, 1685
Zsp2I	ATGCAT	1 cut(s)	862

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.