Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0005064

Physical Location & Seq

Genomic Coordinates Reverse (-)

21005764 .. 21012280

Gene Structure 6517 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG184100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1935 bp

ATGTCAGTGCTTATAGTGACGAGTTTGGGGGATATAGTTGTGGATTTGTACACAGACAGGTGCCCTCTTACTGCCAAGAACTTCTTGAAGCTCTGCAAGATAAAGTATTACAATGGGTGTCTCTTTCACACAGTCCAGAAGGATTTTACTGCACAGACTGGTGACCCAACTGGAACGGGTTCTGGTGGTGATTCAATTTACAAATTTTTGTATGGTGATCAGGCTCGCTTTTTTGGTGATGAGATTCATCTTGATTTGAAGCATGCTAAAACAGGCACAATTGCCATGGCCAGTGCTGGAGAGAATCTCAATGCCTCTCAGTTCTATTTTACATTGCGTGATGATCTAGACTATCTCGATGGGAAGCATACAGTTTTTGGGGAGATAGCAGAGGGGTTGGAGACATTGACAAGGATCAATGAGGCTTATGTGGACGAGACCAACAGACCCTATAAAAATATTAGAATCAAGCATACCTACATATTGGATGATCCCTTTGATGATCCTTCACAACTATCTGAGTTAATTCCTGGAGCCTCCCCGGAAGGCAAACCAAAGGATGAGGTTGATGATAATGTGCGTCTTGAAGATGATTGGGTGCCTATGGATGAAGAATTGGCTCCTGGAGAGCTTGAGGAGCGTCTTCGTGCCAAAGATGCACATTCCAGTGCTGTTGTACTTGAGAGTATAGGGGATATTCCTGATGTTGAGATAAAGCCGCCTGACAATGTGCTTTTTGTTTGTAAACTGAATCCAGTCACTTTAGATGAGGACTTGTTCACAATTTTCTCACGCTTTGGAACTGTGCAAGCGGCAGACATAATACGTGATTATAAGACTGGAGACAGTTTGTGTTATGCGTTCATAGAATTTGAAACGAAAGAGGCGTGTGAACAAGCATATTTCAAGATGGATAATGCTTTGATTGATGACCGAAGAATTCATGTAGATTTTAGTCAGAGCGTTGCAAGGTTGTGGTCCCAATACAGGCGCAAAGAAGCGGGCAAAGGCAAAGGCTGCTTCAAATGTGGTGCACTTGATCACATTGCCAAGGAGTGCACTGGTGATAATGCCAGTAAACAGCAACCTCAGAAGTATGTATTGAAGAATGATAATGCACAGCGTGGTGGAGGCAACAACTCTAGTTATGAGATGGTATTTGATGGAGATACTCCAGAAAGTCCAAGACAAGAAAAGAGACATCAAGACCATGATCCAATTAACCGAGTTGAGAACCAAAAGATGAATAGGCAGAGTTCTGAGGACCGAAGGCGGGATCAAGAAAATAAGCACTCAAGTGATAGAGACCGACACAGTGTCAGAGGTAGAGGATACAAAGAGGAATCAAGTCGAGACAGTAGATCAAGTCGATCTGGTGGAAGGAGTCATCGAGATTTTGAAGGGGAAAGGGATGCTGAAAAGCCTAAGGTGAGACAAAGAGACAAAGATGATAAGCTGGATCAACGGGAAAGTGGAAAGAGATACACAGATGATGGCACCTATGCAGAGAGAAGACGTGATGGAGATTACAGAAAGAGGAGTGCAGATAGTGATAGAGAGAAGCATAAAGAGAGACGAAGAGACAGAGATGATAATATTGACCAGCTGGAGAGTGGAAAGAGGTATGCAGATGACGGTACGTATGCAGCACAGAGGGGAGATGAAGATCACAGAAAAAGGACTGCAGATGGTGATAGATCCACAGAAAGGAGTAGGGATAGAGAATACAGAAAGGGAAGTGTAGCTAATGGTAGCCCTTCAGAAAAGAGAGACGATGAATTTTATAGAAAGAGACGTGCAGAGCATGATAAGCATGCAGAAATGAGGGATGATATAAACTTTAGGAAGAAATCTGTTGATGACAGACGGGACAAAAGAGATGAACCAGTTCATAAGAGAAGCGCGGGGAAGGAAGATAGAGAACATAGAAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000413 GO:0001932 GO:0003674 GO:0003676 GO:0003723 GO:0003755 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0006357 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019219 GO:0019220 GO:0019222 GO:0019538 GO:0031323 GO:0031326 GO:0031399 GO:0032268 GO:0036211 GO:0042325 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051174 GO:0051246 GO:0051252 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0097159 GO:0140096 GO:1901363 GO:1901407 GO:1901564 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pro_isomerase RRM_1 zf-CCHC

Protein Analysis

644

Amino Acids

74.33

Weight (kDa)

5.91

Isoelectric Point (pI)

49.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pro_isomerase	PF00160	4 - 159	5e-44	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
RRM_1	PF00076	245 - 315	6.3e-15	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005064)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53720 AT1G53720
fragaria_vesca	FvH4_3g15530 FvH4_3g15530 FvH4_3g15530 FvH4_3g21900 FvH4_4g19390
malus_domestica	MD05G1222400.v1.1 MD10G1204000.v1.1
prunus_persica	Prupe.4G137900_v2.0.a1
pyrus_communis	pycom05g20510 pycom10g17460 pycom10g17470
rosa_chinensis	RchiOBHm_Chr5g0026161
rosa_laevigata	RLG00000032908
rosa_multiflora	Rmu_sc0009679.1_g000004
rosa_roxburghii	Rroxscaffold_1G00053040 Rroxscaffold_1G00053150
rosa_rugosa	Rorug05G0091100 Rorug05G0091200 Rorug05G0091300 Rorug05G0091400 Rorug05G0092300
rosa_samantha	Rh5AG184100 Rh5BG180900 Rh5BG182100 Rh5CG199900 Rh5CG201500 Rh5DG182500
rosa_wichuraiana	Rw5G016660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	834
AccB1I	GGYRCC	3 cut(s)	60, 598, 1496
AccII	CGCG	1 cut(s)	1904
AciI	CCGC	5 cut(s)	719, 812, 1001, 1273, 1904
AclWI	GGATC	7 cut(s)	422, 485, 497, 1208, 1284, 1467, 1692
AcoI	YGGCCR	1 cut(s)	288
AcsI	RAATTY	4 cut(s)	203, 869, 939, 1778
AcuI	CTGAAG	1 cut(s)	1743
AdeI	CACNNNGTG	1 cut(s)	1124
AfaI	GTAC	3 cut(s)	50, 678, 1639
AfiI	CCNNNNNNNGG	3 cut(s)	987, 1273, 1707
AgsI	TTSAA	9 cut(s)	88, 195, 259, 587, 875, 907, 1024, 1105, 1400
AhdI	GACNNNNNGTC	1 cut(s)	1316
AjiI	CACGTC	2 cut(s)	1517, 1796
AjnI	CCWGG	2 cut(s)	529, 622
AleI	CACNNNNGTG	1 cut(s)	1296
AluBI	AGCT	5 cut(s)	91, 631, 1456, 1606, 1745
AluI	AGCT	5 cut(s)	91, 631, 1456, 1606, 1745
Alw21I	GWGCWC	2 cut(s)	1036, 1061
Alw44I	GTGCAC	2 cut(s)	1032, 1057
AlwI	GGATC	7 cut(s)	422, 485, 497, 1208, 1284, 1467, 1692
AoxI	GGCC	1 cut(s)	288
ApaLI	GTGCAC	2 cut(s)	1032, 1057
ApeKI	GCWGC	2 cut(s)	1017, 1646
ApoI	RAATTY	4 cut(s)	203, 869, 939, 1778
Asp700I	GAANNNNTTC	2 cut(s)	178, 1887
AspLEI	GCGC	2 cut(s)	993, 1904
AspS9I	GGNCC	2 cut(s)	978, 1264
AsuC2I	CCSGG	1 cut(s)	542
AsuHPI	GGTGA	7 cut(s)	173, 200, 227, 248, 1076, 1441, 1703
AvaII	GGWCC	2 cut(s)	978, 1264
AxyI	CCTNAGG	1 cut(s)	1425
BaeGI	GKGCMC	3 cut(s)	65, 1036, 1061
BalI	TGGCCA	1 cut(s)	290
BanI	GGYRCC	3 cut(s)	60, 598, 1496
BbsI	GAAGAC	2 cut(s)	635, 1519
Bbv12I	GWGCWC	2 cut(s)	1036, 1061
BbvI	GCAGC	2 cut(s)	1004, 1658
BccI	CCATC	7 cut(s)	353, 904, 1147, 1157, 1487, 1514, 1682
BciT130I	CCWGG	2 cut(s)	531, 624
BciVI	GTATCC	1 cut(s)	1325
BclI	TGATCA	2 cut(s)	217, 1039
BcnI	CCSGG	1 cut(s)	542
BfaI	CTAG	2 cut(s)	347, 1143
BfmI	CTRYAG	1 cut(s)	1683
BfuI	GTATCC	1 cut(s)	1325
BisI	GCNGC	4 cut(s)	719, 813, 1018, 1647
BlsI	GCNGC	4 cut(s)	720, 814, 1019, 1648
Bme1390I	CCNGG	3 cut(s)	531, 542, 624
Bme18I	GGWCC	2 cut(s)	978, 1264
BmeRI	GACNNNNNGTC	1 cut(s)	1316
BmgBI	CACGTC	2 cut(s)	1517, 1796
BmgT120I	GGNCC	2 cut(s)	978, 1264
BmiI	GGNNCC	6 cut(s)	62, 535, 600, 621, 980, 1498
BmrFI	CCNGG	3 cut(s)	531, 542, 624
BmsI	GCATC	2 cut(s)	646, 1402
BpiI	GAAGAC	2 cut(s)	635, 1519
BplI	GAGNNNNNCTC	2 cut(s)	291, 323
BpmI	CTGGAG	6 cut(s)	318, 552, 645, 861, 1158, 1628
BpuEI	CTTGAG	3 cut(s)	653, 701, 1279
BpuMI	CCSGG	1 cut(s)	542
BsaAI	YACGTR	2 cut(s)	827, 1641
BsaBI	GATNNNNATC	1 cut(s)	1665
BsaI	GGTCTC	2 cut(s)	431, 1299
BsaJI	CCNNGG	3 cut(s)	285, 540, 1050
Bsc4I	CCNNNNNNNGG	3 cut(s)	987, 1273, 1707
Bse1I	ACTGG	9 cut(s)	163, 175, 291, 666, 755, 844, 1066, 1074, 1886
Bse21I	CCTNAGG	1 cut(s)	1425
Bse3DI	GCAATG	2 cut(s)	332, 1044
Bse8I	GATNNNNATC	1 cut(s)	1665
BseBI	CCWGG	2 cut(s)	531, 624
BseDI	CCNNGG	3 cut(s)	285, 540, 1050
BseGI	GGATG	5 cut(s)	493, 565, 613, 1417, 1834
BseJI	GATNNNNATC	1 cut(s)	1665
BseLI	CCNNNNNNNGG	3 cut(s)	987, 1273, 1707
BseMI	GCAATG	2 cut(s)	332, 1044
BseMII	CTCAG	4 cut(s)	332, 510, 1103, 1251
BseNI	ACTGG	9 cut(s)	163, 175, 291, 666, 755, 844, 1066, 1074, 1886
BseRI	GAGGAG	2 cut(s)	650, 1552
BseSI	GKGCMC	3 cut(s)	65, 1036, 1061
BseXI	GCAGC	2 cut(s)	1004, 1658
BsgI	GTGCAG	3 cut(s)	135, 1563, 1818
Bsh1236I	CGCG	1 cut(s)	1904
BshFI	GGCC	1 cut(s)	290
BshNI	GGYRCC	3 cut(s)	60, 598, 1496
BsiHKAI	GWGCWC	2 cut(s)	1036, 1061
BsiSI	CCGG	1 cut(s)	542
BslFI	GGGAC	2 cut(s)	964, 1883
BslI	CCNNNNNNNGG	3 cut(s)	987, 1273, 1707
BsmBI	CGTCTC	3 cut(s)	1567, 1764, 1786
BsmFI	GGGAC	2 cut(s)	964, 1883
BsnI	GGCC	1 cut(s)	290
Bso31I	GGTCTC	2 cut(s)	431, 1299
Bsp1286I	GDGCHC	3 cut(s)	65, 1036, 1061
Bsp1407I	TGTACA	1 cut(s)	48
Bsp19I	CCATGG	1 cut(s)	285
BspACI	CCGC	5 cut(s)	719, 812, 1001, 1273, 1904
BspANI	GGCC	1 cut(s)	290
BspCNI	CTCAG	4 cut(s)	331, 511, 1102, 1252
BspFNI	CGCG	1 cut(s)	1904
BspLI	GGNNCC	6 cut(s)	62, 535, 600, 621, 980, 1498
BspMAI	CTGCAG	1 cut(s)	1687
BspPI	GGATC	7 cut(s)	422, 485, 497, 1208, 1284, 1467, 1692
BspT107I	GGYRCC	3 cut(s)	60, 598, 1496
BspTNI	GGTCTC	2 cut(s)	431, 1299
BsrDI	GCAATG	2 cut(s)	332, 1044
BsrGI	TGTACA	1 cut(s)	48
BsrI	ACTGG	9 cut(s)	163, 175, 291, 666, 755, 844, 1066, 1074, 1886
BssECI	CCNNGG	3 cut(s)	285, 540, 1050
BssT1I	CCWWGG	2 cut(s)	285, 1050
Bst2UI	CCWGG	2 cut(s)	531, 624
Bst4CI	ACNGT	7 cut(s)	133, 373, 805, 848, 1316, 1358, 1637
Bst6I	CTCTTC	1 cut(s)	1573
BstAPI	GCANNNNNTGC	1 cut(s)	1017
BstAUI	TGTACA	1 cut(s)	48
BstBAI	YACGTR	2 cut(s)	827, 1641
BstC8I	GCNNGC	5 cut(s)	226, 264, 810, 1003, 1815
BstDEI	CTNAG	5 cut(s)	318, 519, 1089, 1260, 1425
BstDSI	CCRYGG	1 cut(s)	285
BstEII	GGTNACC	1 cut(s)	161
BstF5I	GGATG	5 cut(s)	493, 565, 613, 1417, 1834
BstFNI	CGCG	1 cut(s)	1904
BstHHI	GCGC	2 cut(s)	993, 1904
BstMWI	GCNNNNNNNGC	4 cut(s)	637, 656, 1017, 1810
BstNI	CCWGG	2 cut(s)	531, 624
BstNSI	RCATGY	2 cut(s)	266, 1817
BstPI	GGTNACC	1 cut(s)	161
BstSCI	CCNGG	3 cut(s)	529, 540, 622
BstSFI	CTRYAG	1 cut(s)	1683
BstSLI	GKGCMC	3 cut(s)	65, 1036, 1061
BstSNI	TACGTA	1 cut(s)	1641
BstUI	CGCG	1 cut(s)	1904
BstV1I	GCAGC	2 cut(s)	1004, 1658
BstV2I	GAAGAC	2 cut(s)	635, 1519
BstX2I	RGATCY	1 cut(s)	1697
BstYI	RGATCY	1 cut(s)	1697
Bsu36I	CCTNAGG	1 cut(s)	1425
BsuI	GTATCC	1 cut(s)	1325
BsuRI	GGCC	1 cut(s)	290
BtgI	CCRYGG	1 cut(s)	285
BtrI	CACGTC	2 cut(s)	1517, 1796
BtsCI	GGATG	5 cut(s)	493, 565, 613, 1417, 1834
BtsIMutI	CAGTG	5 cut(s)	12, 298, 673, 1059, 1321
Cac8I	GCNNGC	5 cut(s)	226, 264, 810, 1003, 1815
CfoI	GCGC	2 cut(s)	993, 1904
Cfr13I	GGNCC	2 cut(s)	978, 1264
CseI	GACGC	2 cut(s)	569, 629
Csp6I	GTAC	3 cut(s)	49, 677, 1638
CviAII	CATG	6 cut(s)	263, 286, 944, 1211, 1805, 1814
CviQI	GTAC	3 cut(s)	49, 677, 1638
DdeI	CTNAG	5 cut(s)	318, 519, 1089, 1260, 1425
DraIII	CACNNNGTG	1 cut(s)	1124
DriI	GACNNNNNGTC	1 cut(s)	1316
EaeI	YGGCCR	1 cut(s)	288
Eam1104I	CTCTTC	1 cut(s)	1573
Eam1105I	GACNNNNNGTC	1 cut(s)	1316
EarI	CTCTTC	1 cut(s)	1573
Eco105I	TACGTA	1 cut(s)	1641
Eco130I	CCWWGG	2 cut(s)	285, 1050
Eco31I	GGTCTC	2 cut(s)	431, 1299
Eco47I	GGWCC	2 cut(s)	978, 1264
Eco57I	CTGAAG	1 cut(s)	1743
Eco81I	CCTNAGG	1 cut(s)	1425
Eco91I	GGTNACC	1 cut(s)	161
EcoO65I	GGTNACC	1 cut(s)	161
EcoRI	GAATTC	1 cut(s)	939
EcoRII	CCWGG	2 cut(s)	529, 622
EcoT14I	CCWWGG	2 cut(s)	285, 1050
ErhI	CCWWGG	2 cut(s)	285, 1050
Esp3I	CGTCTC	3 cut(s)	1567, 1764, 1786
FaeI	CATG	6 cut(s)	266, 289, 947, 1214, 1808, 1817
FalI	AAGNNNNNCTT	2 cut(s)	68, 100
FaqI	GGGAC	2 cut(s)	964, 1883
FatI	CATG	6 cut(s)	262, 285, 943, 1210, 1804, 1813
FauI	CCCGC	3 cut(s)	994, 1266, 1897
FbaI	TGATCA	2 cut(s)	217, 1039
Fnu4HI	GCNGC	4 cut(s)	719, 813, 1018, 1647
FokI	GGATG	5 cut(s)	500, 572, 620, 1424, 1841
Fsp4HI	GCNGC	4 cut(s)	719, 813, 1018, 1647
FspBI	CTAG	2 cut(s)	347, 1143
GlaI	GCGC	2 cut(s)	992, 1903
GluI	GCNGC	4 cut(s)	719, 813, 1018, 1647
GsuI	CTGGAG	6 cut(s)	318, 552, 645, 861, 1158, 1628
HaeIII	GGCC	1 cut(s)	290
HapII	CCGG	1 cut(s)	542
HgaI	GACGC	2 cut(s)	569, 629
HhaI	GCGC	2 cut(s)	993, 1904
Hin1II	CATG	6 cut(s)	266, 289, 947, 1214, 1808, 1817
Hin6I	GCGC	2 cut(s)	991, 1902
HinP1I	GCGC	2 cut(s)	991, 1902
HinfI	GANTC	7 cut(s)	191, 244, 304, 465, 751, 1343, 1384
HpaII	CCGG	1 cut(s)	542
HphI	GGTGA	7 cut(s)	173, 200, 227, 248, 1076, 1441, 1703
Hpy166II	GTNNAC	8 cut(s)	51, 433, 746, 780, 893, 1034, 1059, 1079
Hpy188I	TCNGA	6 cut(s)	520, 960, 1092, 1261, 1322, 1762
Hpy8I	GTNNAC	8 cut(s)	51, 433, 746, 780, 893, 1034, 1059, 1079
HpyAV	CCTTC	9 cut(s)	133, 516, 539, 1263, 1374, 1394, 1767, 1903, 1923
HpyCH4III	ACNGT	7 cut(s)	133, 373, 805, 848, 1316, 1358, 1637
HpyCH4IV	ACGT	4 cut(s)	826, 1516, 1640, 1795
HpyF10VI	GCNNNNNNNGC	4 cut(s)	637, 656, 1017, 1810
HpyF3I	CTNAG	5 cut(s)	318, 519, 1089, 1260, 1425
HpySE526I	ACGT	4 cut(s)	826, 1516, 1640, 1795
Hsp92II	CATG	6 cut(s)	266, 289, 947, 1214, 1808, 1817
HspAI	GCGC	2 cut(s)	991, 1902
Ksp22I	TGATCA	2 cut(s)	217, 1039
LmnI	GCTCC	3 cut(s)	533, 625, 637
Lsp1109I	GCAGC	2 cut(s)	1004, 1658
LweI	GCATC	2 cut(s)	646, 1402
MaeI	CTAG	2 cut(s)	347, 1143
MaeII	ACGT	4 cut(s)	826, 1516, 1640, 1795
MaeIII	GTNAC	3 cut(s)	16, 161, 757
MfeI	CAATTG	1 cut(s)	279
MflI	RGATCY	1 cut(s)	1697
MhlI	GDGCHC	3 cut(s)	65, 1036, 1061
MlsI	TGGCCA	1 cut(s)	290
MluNI	TGGCCA	1 cut(s)	290
MlyI	GAGTC	1 cut(s)	1393
MmeI	TCCRAC	1 cut(s)	378
Mox20I	TGGCCA	1 cut(s)	290
MroXI	GAANNNNTTC	2 cut(s)	178, 1887
MscI	TGGCCA	1 cut(s)	290
MseI	TTAA	2 cut(s)	524, 1221
MslI	CAYNNNNRTG	2 cut(s)	666, 1296
Msp20I	TGGCCA	1 cut(s)	290
MspA1I	CMGCKG	1 cut(s)	1606
MspI	CCGG	1 cut(s)	542
MspR9I	CCNGG	3 cut(s)	531, 542, 624
MunI	CAATTG	1 cut(s)	279
MvaI	CCWGG	2 cut(s)	531, 624
MvnI	CGCG	1 cut(s)	1904
MwoI	GCNNNNNNNGC	4 cut(s)	637, 656, 1017, 1810
NciI	CCSGG	1 cut(s)	542
NcoI	CCATGG	1 cut(s)	285
NlaIII	CATG	6 cut(s)	266, 289, 947, 1214, 1808, 1817
NlaIV	GGNNCC	6 cut(s)	62, 535, 600, 621, 980, 1498
NmuCI	GTSAC	3 cut(s)	16, 161, 757
NspI	RCATGY	2 cut(s)	266, 1817
OliI	CACNNNNGTG	1 cut(s)	1296
PaeI	GCATGC	2 cut(s)	266, 1817
PcsI	WCGNNNNNNNCGW	1 cut(s)	884
PdmI	GAANNNNTTC	2 cut(s)	178, 1887
PfeI	GAWTC	6 cut(s)	191, 244, 304, 465, 751, 1343
PfoI	TCCNGGA	2 cut(s)	529, 622
PkrI	GCNGC	4 cut(s)	720, 814, 1019, 1648
PleI	GAGTC	1 cut(s)	1392
PpsI	GAGTC	1 cut(s)	1392
Ppu21I	YACGTR	2 cut(s)	827, 1641
PsiI	TTATAA	1 cut(s)	834
Psp6I	CCWGG	2 cut(s)	529, 622
PspEI	GGTNACC	1 cut(s)	161
PspGI	CCWGG	2 cut(s)	529, 622
PspN4I	GGNNCC	6 cut(s)	62, 535, 600, 621, 980, 1498
PspPI	GGNCC	2 cut(s)	978, 1264
PstI	CTGCAG	1 cut(s)	1687
PsuI	RGATCY	1 cut(s)	1697
PvuII	CAGCTG	1 cut(s)	1606
RsaI	GTAC	3 cut(s)	50, 678, 1639
RsaNI	GTAC	3 cut(s)	49, 677, 1638
RseI	CAYNNNNRTG	2 cut(s)	666, 1296
SaqAI	TTAA	2 cut(s)	524, 1221
SatI	GCNGC	4 cut(s)	719, 813, 1018, 1647
Sau96I	GGNCC	2 cut(s)	978, 1264
SchI	GAGTC	1 cut(s)	1393
ScrFI	CCNGG	3 cut(s)	531, 542, 624
SduI	GDGCHC	3 cut(s)	65, 1036, 1061
SfaNI	GCATC	2 cut(s)	646, 1402
SfcI	CTRYAG	1 cut(s)	1683
SinI	GGWCC	2 cut(s)	978, 1264
SmiMI	CAYNNNNRTG	2 cut(s)	666, 1296
SmlI	CTYRAG	3 cut(s)	632, 680, 1294
SmoI	CTYRAG	3 cut(s)	632, 680, 1294
SnaBI	TACGTA	1 cut(s)	1641
SphI	GCATGC	2 cut(s)	266, 1817
SsiI	CCGC	5 cut(s)	719, 812, 1001, 1273, 1904
SspI	AATATT	2 cut(s)	460, 1597
SspMI	CTAG	2 cut(s)	347, 1143
StyD4I	CCNGG	3 cut(s)	529, 540, 622
StyI	CCWWGG	2 cut(s)	285, 1050
TaaI	ACNGT	7 cut(s)	133, 373, 805, 848, 1316, 1358, 1637
TaiI	ACGT	4 cut(s)	829, 1519, 1643, 1798
TaqI	TCGA	4 cut(s)	357, 1351, 1369, 1390
TaqII	GACCGA	3 cut(s)	948, 1281, 1323
TatI	WGTACW	2 cut(s)	48, 676
TauI	GCSGC	2 cut(s)	721, 815
TfiI	GAWTC	6 cut(s)	191, 244, 304, 465, 751, 1343
Tru1I	TTAA	2 cut(s)	524, 1221
Tru9I	TTAA	2 cut(s)	524, 1221
TscAI	CASTG	5 cut(s)	12, 298, 673, 1066, 1321
TseFI	GTSAC	3 cut(s)	16, 161, 757
TseI	GCWGC	2 cut(s)	1017, 1646
Tsp45I	GTSAC	3 cut(s)	16, 161, 757
TspDTI	ATGAA	9 cut(s)	236, 624, 853, 932, 1259, 1677, 1791, 1880, 1896
TspRI	CASTG	5 cut(s)	12, 298, 673, 1066, 1321
VneI	GTGCAC	2 cut(s)	1032, 1057
VpaK11BI	GGWCC	2 cut(s)	978, 1264
XapI	RAATTY	4 cut(s)	203, 869, 939, 1778
XbaI	TCTAGA	1 cut(s)	346
XceI	RCATGY	2 cut(s)	266, 1817
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1610
XmnI	GAANNNNTTC	2 cut(s)	178, 1887
XspI	CTAG	2 cut(s)	347, 1143

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.