Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0001425

Physical Location & Seq

Genomic Coordinates Reverse (-)

24322594 .. 24327273

Gene Structure 4680 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g21230.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2493 bp

ATGAAGTTTGGGAAGGAATTTGCAGCACAAATAGTGCCAGAATGGCAAGAAGCATACATGAACTACAGCTACCTAAAATCGCTCATTAAAGACATTCAACACTCCAAGCAAAGAAACAAGCCTACTACAACATCGACTTCCACCACACCGCCGCCCCACCACATAAAGCGGAAGCTCACATTGTACAGAGCCTTCAGTGGTCTGACCAGAAGCCGGCACCATCAAGAACCCATTAGCTCTAGTCCGGGGGACATCGAAAACCAAGCCATCCTCGTACACCATGTAAGACCATCAGAAGGGTCTAGTCACCAGAGTTACCAGACCACTTTCTTAATGGTTGCCGAGGAAGGCGGGGTTAAGGAGTTGGAGTATTTCAAGAGGGCTGATGATGAGTTCAACAAAGTTGATAAGTTTTACAGGGGGAAAGTTGAAGAGGTCATGAAAGAAGCTGCTGTGCTCAATAAGCAAATGGATGCTTTGATCGCTTTTCGGATAAAGGTGGAGCATCCTTATCATGAGAAGCTGTTTGATTGGTCCGGCGAGATGACTCGTCTTGCTTCAGATGTTGCAGATTCCACAGCTCAGTTGGCTGCTTCAACTCCTAGGGGAGCCGGAGTAAGAGGACGTGCATCTATGGCTACGAATGTGATCGTAGAAGATGAATCAAGCAGTCAAGGGGAACAATATTCCGGCGATGATGATAAAGAGAAAGAAGAATTACATGTTGATGAAATGGTTAAGGTAGAGAAGCCAGAGAAAATTAGACGGCCTAGACCTGCGCCACTAGATGTACTAAATCGTGTGACTATGAATCAAACTGTTGAGACTCCACGTTCGACGATTAAAGGCTTCCTCAATGTGCCTCAGCAGACTGATCTCAAATTCAGCAGGGGAAATCTCAATAAAGTTGAAAAACAACTTAAGAGGGCTTTCGTCATATTTTACCATAAACTTAGGCTTCTAAAGAGCTTTGGATTCTTGAATTCATTGGCATTTTCGAAAATCATGAAGAAGTATGACAAGGTCACTTCAAGAAATACATCAAAATCCTACATGAAGATGGTAGATAACTCCTACCTTGGCAGCTCTGATGAGGTTACCAAGCTTATAGAGAGGGTTGAAAGTACATTCATCAAGCATTTCTCAAACTCAAATCGCCGGAAAGGGATGGCAGTCTTAAGGCCGAAGCGAAGGATAGAAAGACATAGGATAACATTTCTCATGGGTTGTTTTGCTGGCTGCACAGTTGCTCTCATATTAGCTCTGATTTTGATTGTACGCGCTCGCGATCTTATGCACGAGTCAGGGAGGACCAAGTACATGGATACCTTACTTCCTCTATACAGCTTGTTCGGATTAGTTGTTCTACACATGCTTATGTATGCTGGAAACATATACTTCTGGAGACGCTACAGAGTCAATTACTCTTTCATATTTGGTTTCAAGCAAGGAACTGAGTTGGGGTACAGAGAGGTTCTCCTTGTTAGTTTTGGTCTGACAGTGCTTGCACTAGCTGCTGTTCTCTCAAATCTTGACATGGAAATGGACCCCAAAACCAAAGACTACAAACAATTCACTGAACTTCTCCCTCTCTTCTTGGTTTTGTCTGTAATTGTGATATTACTATGCCCATTCAACATCATCTATCGCTCAAGTCGCTATTTCTTCCTTGTTTGTCTATTTCATTGTATCTGTGCTCCTCTATATAAGGTCACACTGCCAGATTTTCTCTTGGCTGATCAGTTCACTAGCCAGGTGCAAGCCATTAGAAGCTTGCAGTTCTATATTTGCTACTATGGTTGGGGAGACTATAAACACAGAGAAACTAGTTGTAGATCAAGCGATGTTTTCAACACTTTCAGTTTTATCGTTGCCTGTATTCCATATTGGTCTCGCCTTCTTCAGTGCCTCCGACGCCTGTTTGAAGAGAAGGATGCACACCAAGGTTACAATGGGCTCAAGTACTTCTTCACAATAGTTGCTGTTACCATGAGGACAGCTTACAGTCTTAATAAGGATGTGAAATGGAAAATTCTTGCCGGGGTATTTTCAGTCATTGCAGCAGTGTCTGGAACATATTGGGATCTTGTTATAGACTGGGGGCTTCTGCAACGCAATTCGAAGAATCGCTGGCTGAGAGACAAACTCCTAGTCCCTTACACAAGTGTATACTTTGGAGCTATGGTGAGTTTTGCATTGACACTTCCATTGTTAAGAGTTACCATAACATTTTCTAACTGGTTAAGGGAAATGCAGGTGTTGAATGTGTTGCTGAGGTTTGCTTGGTTGCAGACAGTTTTAGATTTCAATGTTTCTTTCATGCATAGACAAACAATGATAGCAGTTGTGGCCAGCTTGGAGATAATCCGTCGAGGTATGTGGAATTTCTTCAGGTTGGAGAATGAACATTTGAACAATGTTGGCAAGTACAGGGCGTTCAAGTCAGTGCCACTGCCATTCAACTATGATGAAGACCACAACAAGAATACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0008150 GO:0012505 GO:0016020 GO:0031984 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048878 GO:0050801 GO:0055062 GO:0055065 GO:0055069 GO:0055076 GO:0055080 GO:0055081 GO:0055083 GO:0065007 GO:0065008 GO:0071944 GO:0072505 GO:0072506 GO:0072507 GO:0098771 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EXS SPX

Protein Analysis

831

Amino Acids

96.29

Weight (kDa)

9.52

Isoelectric Point (pI)

43.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPX	PF03105	1 - 355	1.4e-84	SPX domain
EXS	PF03124	444 - 730	3.3e-79	EXS family
EXS	PF03124	738 - 804	7.1e-15	EXS family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001425)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14040 AT1G26730 AT1G26730 AT1G35350 AT1G35350 AT2G03240 AT2G03260 AT2G03260
fragaria_vesca	FvH4_4g21230 FvH4_4g30900 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930
malus_domestica	MD00G1081000.v1.1 MD00G1081300.v1.1 MD00G1200800.v1.1 MD16G1068000.v1.1
prunus_persica	Prupe.1G278700_v2.0.a1 Prupe.1G278700_v2.0.a1 Prupe.1G278700_v2.0.a1 Prupe.1G278800_v2.0.a1
pyrus_communis	pycom13g06110 pycom13g06120 pycom16g05960
rosa_chinensis	RchiOBHm_Chr4g0439231
rosa_laevigata	RLG00000006286
rosa_multiflora	Rmu_sc0006598.1_g000012 Rmu_sc0007941.1_g000004 Rmu_ssc0000171.1_g000025
rosa_roxburghii	Rroxscaffold_2G00115520 Rroxscaffold_2G00115990 Rroxscaffold_5G00380220
rosa_rugosa	Rorug04G0317100 Rorug04G0317200
rosa_samantha	Rh4AG367700 Rh4BG379600 Rh4CG393900 Rh4DG373900
rosa_wichuraiana	Rw0G005620 Rw0G011630 Rw5G028550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2245
Acc36I	ACCTGC	2 cut(s)	784, 2245
AccB1I	GGYRCC	1 cut(s)	216
AccI	GTMKAC	1 cut(s)	2169
AccII	CGCG	2 cut(s)	1281, 1287
AciI	CCGC	4 cut(s)	149, 152, 169, 351
AclWI	GGATC	1 cut(s)	2091
AcoI	YGGCCR	1 cut(s)	2349
AcsI	RAATTY	5 cut(s)	17, 881, 982, 2031, 2383
AcuI	CTGAAG	4 cut(s)	178, 543, 1886, 2374
AcyI	GRCGYC	1 cut(s)	1915
AfaI	GTAC	9 cut(s)	185, 276, 792, 1126, 1278, 1319, 1466, 1964, 2429
AfiI	CCNNNNNNNGG	2 cut(s)	213, 296
AflII	CTTAAG	2 cut(s)	920, 1177
AflIII	ACRYGT	1 cut(s)	721
AhlI	ACTAGT	1 cut(s)	1826
AjiI	CACGTC	1 cut(s)	626
AjnI	CCWGG	1 cut(s)	1752
AloI	GAACNNNNNNTCC	2 cut(s)	1347, 1379
Alw21I	GWGCWC	2 cut(s)	459, 1699
Alw26I	GTCTC	5 cut(s)	818, 1399, 1800, 1896, 2133
AlwI	GGATC	1 cut(s)	2091
AlwNI	CAGNNNCTG	1 cut(s)	2069
AoxI	GGCC	3 cut(s)	767, 1181, 2349
ApeKI	GCWGC	7 cut(s)	23, 449, 590, 1083, 1239, 1514, 2060
ApoI	RAATTY	5 cut(s)	17, 881, 982, 2031, 2383
ArsI	GACNNNNNNTTYG	4 cut(s)	817, 849, 2136, 2168
Asp700I	GAANNNNTTC	1 cut(s)	2387
AspA2I	CCTAGG	1 cut(s)	602
AspLEI	GCGC	2 cut(s)	781, 1283
AspS9I	GGNCC	3 cut(s)	534, 1311, 1546
AsuC2I	CCSGG	2 cut(s)	246, 2041
AsuHPI	GGTGA	2 cut(s)	299, 2197
AsuII	TTCGAA	2 cut(s)	998, 2120
AvaII	GGWCC	3 cut(s)	534, 1311, 1546
AvrII	CCTAGG	1 cut(s)	602
BalI	TGGCCA	1 cut(s)	2351
BanI	GGYRCC	1 cut(s)	216
BanII	GRGCYC	1 cut(s)	1959
BarI	GAAGNNNNNNTAC	2 cut(s)	176, 208
BauI	CACGAG	1 cut(s)	1298
BbsI	GAAGAC	1 cut(s)	2478
Bbv12I	GWGCWC	2 cut(s)	459, 1699
BbvCI	CCTCAGC	2 cut(s)	864, 2273
BbvI	GCAGC	7 cut(s)	35, 436, 577, 1095, 1226, 1501, 2072
BccI	CCATC	5 cut(s)	228, 275, 298, 1054, 1162
BceAI	ACGGC	1 cut(s)	782
BciT130I	CCWGG	1 cut(s)	1754
BciVI	GTATCC	1 cut(s)	1318
BclI	TGATCA	1 cut(s)	1738
BcnI	CCSGG	2 cut(s)	246, 2041
BcoDI	GTCTC	5 cut(s)	818, 1399, 1800, 1896, 2133
BcuI	ACTAGT	1 cut(s)	1826
BfaI	CTAG	9 cut(s)	240, 303, 603, 771, 785, 1511, 1749, 1827, 2150
BfmI	CTRYAG	2 cut(s)	64, 1411
BfrI	CTTAAG	2 cut(s)	920, 1177
BfuAI	ACCTGC	2 cut(s)	784, 2245
BfuI	GTATCC	1 cut(s)	1318
BglI	GCCNNNNNGGC	1 cut(s)	43
BisI	GCNGC	8 cut(s)	24, 152, 450, 591, 1084, 1240, 1515, 2061
BlnI	CCTAGG	1 cut(s)	602
BlsI	GCNGC	8 cut(s)	25, 153, 451, 592, 1085, 1241, 1516, 2062
BmcAI	AGTACT	1 cut(s)	1964
Bme1390I	CCNGG	3 cut(s)	246, 1754, 2041
Bme18I	GGWCC	3 cut(s)	534, 1311, 1546
BmgBI	CACGTC	1 cut(s)	626
BmgT120I	GGNCC	3 cut(s)	534, 1311, 1546
BmiI	GGNNCC	3 cut(s)	218, 610, 1548
BmrFI	CCNGG	3 cut(s)	246, 1754, 2041
BmrI	ACTGGG	1 cut(s)	2107
BmsI	GCATC	4 cut(s)	463, 514, 638, 1924
BmuI	ACTGGG	1 cut(s)	2107
BpiI	GAAGAC	1 cut(s)	2478
BplI	GAGNNNNNCTC	4 cut(s)	1461, 1493, 2130, 2162
BpmI	CTGGAG	1 cut(s)	1423
Bpu10I	CCTNAGC	2 cut(s)	864, 2273
Bpu14I	TTCGAA	2 cut(s)	998, 2120
BpuEI	CTTGAG	2 cut(s)	1636, 1943
BpuMI	CCSGG	2 cut(s)	246, 2041
BsaHI	GRCGYC	1 cut(s)	1915
BsaI	GGTCTC	1 cut(s)	1896
BsaJI	CCNNGG	6 cut(s)	245, 342, 602, 1078, 1942, 2040
BsaXI	ACNNNNNCTCC	6 cut(s)	353, 383, 600, 630, 2169, 2199
Bsc4I	CCNNNNNNNGG	2 cut(s)	213, 296
Bse118I	RCCGGY	1 cut(s)	213
Bse1I	ACTGG	2 cut(s)	2102, 2243
Bse3DI	GCAATG	1 cut(s)	2055
BseBI	CCWGG	1 cut(s)	1754
BseDI	CCNNGG	6 cut(s)	245, 342, 602, 1078, 1942, 2040
BseGI	GGATG	6 cut(s)	267, 478, 505, 1173, 1939, 2023
BseLI	CCNNNNNNNGG	2 cut(s)	213, 296
BseMI	GCAATG	1 cut(s)	2055
BseMII	CTCAG	5 cut(s)	596, 878, 1446, 2126, 2264
BseNI	ACTGG	2 cut(s)	2102, 2243
BseRI	GAGGAG	1 cut(s)	1689
BseXI	GCAGC	7 cut(s)	35, 436, 577, 1095, 1226, 1501, 2072
BsgI	GTGCAG	1 cut(s)	1225
Bsh1236I	CGCG	2 cut(s)	1281, 1287
BshFI	GGCC	3 cut(s)	769, 1183, 2351
BshNI	GGYRCC	1 cut(s)	216
BsiHKAI	GWGCWC	2 cut(s)	459, 1699
BsiSI	CCGG	7 cut(s)	214, 245, 537, 612, 690, 1159, 2040
BslFI	GGGAC	2 cut(s)	263, 2138
BslI	CCNNNNNNNGG	2 cut(s)	213, 296
BsmAI	GTCTC	5 cut(s)	818, 1399, 1800, 1896, 2133
BsmBI	CGTCTC	1 cut(s)	1399
BsmFI	GGGAC	2 cut(s)	263, 2138
BsnI	GGCC	3 cut(s)	769, 1183, 2351
Bso31I	GGTCTC	1 cut(s)	1896
Bsp119I	TTCGAA	2 cut(s)	998, 2120
Bsp1286I	GDGCHC	3 cut(s)	459, 1699, 1959
Bsp1407I	TGTACA	1 cut(s)	183
Bsp143I	GATC	7 cut(s)	480, 648, 874, 1288, 1738, 1835, 2083
Bsp68I	TCGCGA	1 cut(s)	1287
BspACI	CCGC	4 cut(s)	149, 152, 169, 351
BspANI	GGCC	3 cut(s)	769, 1183, 2351
BspCNI	CTCAG	5 cut(s)	595, 877, 1447, 2127, 2265
BspFNI	CGCG	2 cut(s)	1281, 1287
BspHI	TCATGA	3 cut(s)	438, 514, 1005
BspLI	GGNNCC	3 cut(s)	218, 610, 1548
BspMI	ACCTGC	2 cut(s)	784, 2245
BspPI	GGATC	1 cut(s)	2091
BspT104I	TTCGAA	2 cut(s)	998, 2120
BspT107I	GGYRCC	1 cut(s)	216
BspTI	CTTAAG	2 cut(s)	920, 1177
BspTNI	GGTCTC	1 cut(s)	1896
BsrDI	GCAATG	1 cut(s)	2055
BsrFI	RCCGGY	1 cut(s)	213
BsrGI	TGTACA	1 cut(s)	183
BsrI	ACTGG	2 cut(s)	2102, 2243
BssAI	RCCGGY	1 cut(s)	213
BssECI	CCNNGG	6 cut(s)	245, 342, 602, 1078, 1942, 2040
BssMI	GATC	7 cut(s)	480, 648, 874, 1288, 1738, 1835, 2083
BssNAI	GTATAC	1 cut(s)	2170
BssNI	GRCGYC	1 cut(s)	1915
BssSI	CACGAG	1 cut(s)	1298
BssT1I	CCWWGG	3 cut(s)	602, 1078, 1942
Bst1107I	GTATAC	1 cut(s)	2170
Bst2BI	CACGAG	1 cut(s)	1298
Bst2UI	CCWGG	1 cut(s)	1754
Bst4CI	ACNGT	5 cut(s)	820, 1246, 1501, 2006, 2296
Bst6I	CTCTTC	3 cut(s)	426, 1598, 1920
BstACI	GRCGYC	1 cut(s)	1915
BstAFI	CTTAAG	2 cut(s)	920, 1177
BstAPI	GCANNNNNTGC	1 cut(s)	1514
BstAUI	TGTACA	1 cut(s)	183
BstBI	TTCGAA	2 cut(s)	998, 2120
BstC8I	GCNNGC	8 cut(s)	215, 1237, 1285, 1506, 1761, 1775, 2132, 2353
BstDEI	CTNAG	6 cut(s)	582, 864, 953, 1455, 2135, 2273
BstEII	GGTNACC	1 cut(s)	1096
BstF5I	GGATG	6 cut(s)	267, 478, 505, 1173, 1939, 2023
BstFNI	CGCG	2 cut(s)	1281, 1287
BstHHI	GCGC	2 cut(s)	781, 1283
BstKTI	GATC	7 cut(s)	483, 651, 877, 1291, 1741, 1838, 2086
BstMAI	GTCTC	5 cut(s)	818, 1399, 1800, 1896, 2133
BstMBI	GATC	7 cut(s)	480, 648, 874, 1288, 1738, 1835, 2083
BstMWI	GCNNNNNNNGC	9 cut(s)	43, 463, 482, 587, 635, 1514, 1656, 1914, 2348
BstNI	CCWGG	1 cut(s)	1754
BstNSI	RCATGY	2 cut(s)	725, 1375
BstPI	GGTNACC	1 cut(s)	1096
BstSCI	CCNGG	3 cut(s)	244, 1752, 2039
BstSFI	CTRYAG	2 cut(s)	64, 1411
BstUI	CGCG	2 cut(s)	1281, 1287
BstV1I	GCAGC	7 cut(s)	35, 436, 577, 1095, 1226, 1501, 2072
BstV2I	GAAGAC	1 cut(s)	2478
BstX2I	RGATCY	1 cut(s)	2083
BstXI	CCANNNNNNTGG	1 cut(s)	1321
BstYI	RGATCY	1 cut(s)	2083
BstZ17I	GTATAC	1 cut(s)	2170
BsuI	GTATCC	1 cut(s)	1318
BsuRI	GGCC	3 cut(s)	769, 1183, 2351
BtgZI	GCGATG	2 cut(s)	708, 1857
BtrI	CACGTC	1 cut(s)	626
BtsCI	GGATG	6 cut(s)	267, 478, 505, 1173, 1939, 2023
BtsI	GCAGTG	3 cut(s)	1715, 2070, 2450
BtsIMutI	CAGTG	8 cut(s)	202, 1506, 1575, 1715, 1910, 2070, 2450, 2451
BtuMI	TCGCGA	1 cut(s)	1287
BveI	ACCTGC	2 cut(s)	784, 2245
Cac8I	GCNNGC	8 cut(s)	215, 1237, 1285, 1506, 1761, 1775, 2132, 2353
CaiI	CAGNNNCTG	1 cut(s)	2069
CciI	TCATGA	3 cut(s)	438, 514, 1005
CfoI	GCGC	2 cut(s)	781, 1283
Cfr10I	RCCGGY	1 cut(s)	213
Cfr13I	GGNCC	3 cut(s)	534, 1311, 1546
CseI	GACGC	2 cut(s)	1416, 1923
Csp6I	GTAC	9 cut(s)	184, 275, 791, 1125, 1277, 1318, 1465, 1963, 2428
CviQI	GTAC	9 cut(s)	184, 275, 791, 1125, 1277, 1318, 1465, 1963, 2428
DdeI	CTNAG	6 cut(s)	582, 864, 953, 1455, 2135, 2273
DpnI	GATC	7 cut(s)	482, 650, 876, 1290, 1740, 1837, 2085
DpnII	GATC	7 cut(s)	480, 648, 874, 1288, 1738, 1835, 2083
EaeI	YGGCCR	1 cut(s)	2349
Eam1104I	CTCTTC	3 cut(s)	426, 1598, 1920
EarI	CTCTTC	3 cut(s)	426, 1598, 1920
Eco130I	CCWWGG	3 cut(s)	602, 1078, 1942
Eco24I	GRGCYC	1 cut(s)	1959
Eco31I	GGTCTC	1 cut(s)	1896
Eco47I	GGWCC	3 cut(s)	534, 1311, 1546
Eco57I	CTGAAG	4 cut(s)	178, 543, 1886, 2374
Eco91I	GGTNACC	1 cut(s)	1096
EcoO65I	GGTNACC	1 cut(s)	1096
EcoRI	GAATTC	1 cut(s)	982
EcoRII	CCWGG	1 cut(s)	1752
EcoT14I	CCWWGG	3 cut(s)	602, 1078, 1942
EcoT22I	ATGCAT	1 cut(s)	2325
EcoT38I	GRGCYC	1 cut(s)	1959
ErhI	CCWWGG	3 cut(s)	602, 1078, 1942
Esp3I	CGTCTC	1 cut(s)	1399
FalI	AAGNNNNNCTT	2 cut(s)	1952, 1984
FaqI	GGGAC	2 cut(s)	263, 2138
FauI	CCCGC	1 cut(s)	344
FbaI	TGATCA	1 cut(s)	1738
FblI	GTMKAC	1 cut(s)	2169
Fnu4HI	GCNGC	8 cut(s)	24, 152, 450, 591, 1084, 1240, 1515, 2061
FokI	GGATG	6 cut(s)	254, 485, 492, 1180, 1946, 2030
FriOI	GRGCYC	1 cut(s)	1959
Fsp4HI	GCNGC	8 cut(s)	24, 152, 450, 591, 1084, 1240, 1515, 2061
FspBI	CTAG	9 cut(s)	240, 303, 603, 771, 785, 1511, 1749, 1827, 2150
GlaI	GCGC	2 cut(s)	780, 1282
GluI	GCNGC	8 cut(s)	24, 152, 450, 591, 1084, 1240, 1515, 2061
GsuI	CTGGAG	1 cut(s)	1423
HaeIII	GGCC	3 cut(s)	769, 1183, 2351
HapII	CCGG	7 cut(s)	214, 245, 537, 612, 690, 1159, 2040
HgaI	GACGC	2 cut(s)	1416, 1923
HhaI	GCGC	2 cut(s)	781, 1283
Hin1I	GRCGYC	1 cut(s)	1915
Hin6I	GCGC	2 cut(s)	779, 1281
HinP1I	GCGC	2 cut(s)	779, 1281
HindIII	AAGCTT	2 cut(s)	1103, 1771
HinfI	GANTC	9 cut(s)	547, 572, 662, 811, 826, 975, 1301, 1416, 2125
HpaII	CCGG	7 cut(s)	214, 245, 537, 612, 690, 1159, 2040
HphI	GGTGA	2 cut(s)	299, 2197
Hpy166II	GTNNAC	3 cut(s)	277, 1746, 2170
Hpy188I	TCNGA	9 cut(s)	204, 295, 492, 562, 1090, 1266, 1355, 1497, 1913
Hpy8I	GTNNAC	3 cut(s)	277, 1746, 2170
Hpy99I	CGWCG	3 cut(s)	841, 1917, 2373
HpyAV	CCTTC	7 cut(s)	7, 202, 290, 341, 1185, 1907, 1924
HpyCH4III	ACNGT	5 cut(s)	820, 1246, 1501, 2006, 2296
HpyCH4IV	ACGT	2 cut(s)	625, 832
HpyF10VI	GCNNNNNNNGC	9 cut(s)	43, 463, 482, 587, 635, 1514, 1656, 1914, 2348
HpyF3I	CTNAG	6 cut(s)	582, 864, 953, 1455, 2135, 2273
HpySE526I	ACGT	2 cut(s)	625, 832
Hsp92I	GRCGYC	1 cut(s)	1915
HspAI	GCGC	2 cut(s)	779, 1281
KroI	GCCGGC	1 cut(s)	213
KroNI	GCCGGC	1 cut(s)	215
Ksp22I	TGATCA	1 cut(s)	1738
Kzo9I	GATC	7 cut(s)	480, 648, 874, 1288, 1738, 1835, 2083
LmnI	GCTCC	4 cut(s)	502, 608, 1702, 2177
Lsp1109I	GCAGC	7 cut(s)	35, 436, 577, 1095, 1226, 1501, 2072
LweI	GCATC	4 cut(s)	463, 514, 638, 1924
MaeI	CTAG	9 cut(s)	240, 303, 603, 771, 785, 1511, 1749, 1827, 2150
MaeII	ACGT	2 cut(s)	625, 832
MaeIII	GTNAC	9 cut(s)	305, 314, 802, 1024, 1096, 1711, 1946, 1984, 2218
MalI	GATC	7 cut(s)	482, 650, 876, 1290, 1740, 1837, 2085
MboI	GATC	7 cut(s)	480, 648, 874, 1288, 1738, 1835, 2083
MflI	RGATCY	1 cut(s)	2083
MhlI	GDGCHC	3 cut(s)	459, 1699, 1959
MlsI	TGGCCA	1 cut(s)	2351
MluNI	TGGCCA	1 cut(s)	2351
MlyI	GAGTC	4 cut(s)	541, 820, 1310, 1425
MmeI	TCCRAC	3 cut(s)	345, 1936, 2376
Mox20I	TGGCCA	1 cut(s)	2351
Mph1103I	ATGCAT	1 cut(s)	2325
MroNI	GCCGGC	1 cut(s)	213
MroXI	GAANNNNTTC	1 cut(s)	2387
MscI	TGGCCA	1 cut(s)	2351
MslI	CAYNNNNRTG	4 cut(s)	726, 1058, 1376, 1541
Msp20I	TGGCCA	1 cut(s)	2351
MspCI	CTTAAG	2 cut(s)	920, 1177
MspI	CCGG	7 cut(s)	214, 245, 537, 612, 690, 1159, 2040
MspR9I	CCNGG	3 cut(s)	246, 1754, 2041
MvaI	CCWGG	1 cut(s)	1754
MvnI	CGCG	2 cut(s)	1281, 1287
MwoI	GCNNNNNNNGC	9 cut(s)	43, 463, 482, 587, 635, 1514, 1656, 1914, 2348
NaeI	GCCGGC	1 cut(s)	215
NciI	CCSGG	2 cut(s)	246, 2041
NdeII	GATC	7 cut(s)	480, 648, 874, 1288, 1738, 1835, 2083
NgoMIV	GCCGGC	1 cut(s)	213
NlaIV	GGNNCC	3 cut(s)	218, 610, 1548
NmeAIII	GCCGAG	1 cut(s)	367
NmuCI	GTSAC	4 cut(s)	305, 802, 1024, 1711
NruI	TCGCGA	1 cut(s)	1287
NsiI	ATGCAT	1 cut(s)	2325
NspI	RCATGY	2 cut(s)	725, 1375
NspV	TTCGAA	2 cut(s)	998, 2120
PagI	TCATGA	3 cut(s)	438, 514, 1005
PaqCI	CACCTGC	1 cut(s)	2245
PciI	ACATGT	1 cut(s)	721
PdiI	GCCGGC	1 cut(s)	215
PdmI	GAANNNNTTC	1 cut(s)	2387
PfeI	GAWTC	5 cut(s)	572, 662, 811, 975, 2125
PflFI	GACNNNGTC	1 cut(s)	1022
PkrI	GCNGC	8 cut(s)	25, 153, 451, 592, 1085, 1241, 1516, 2062
PleI	GAGTC	4 cut(s)	541, 820, 1309, 1424
PpsI	GAGTC	4 cut(s)	541, 820, 1309, 1424
PscI	ACATGT	1 cut(s)	721
Psp6I	CCWGG	1 cut(s)	1752
PspEI	GGTNACC	1 cut(s)	1096
PspGI	CCWGG	1 cut(s)	1752
PspN4I	GGNNCC	3 cut(s)	218, 610, 1548
PspPI	GGNCC	3 cut(s)	534, 1311, 1546
PsrI	GAACNNNNNNTAC	4 cut(s)	53, 85, 2420, 2452
PstNI	CAGNNNCTG	1 cut(s)	2069
PsuI	RGATCY	1 cut(s)	2083
PsyI	GACNNNGTC	1 cut(s)	1022
RruI	TCGCGA	1 cut(s)	1287
RsaI	GTAC	9 cut(s)	185, 276, 792, 1126, 1278, 1319, 1466, 1964, 2429
RsaNI	GTAC	9 cut(s)	184, 275, 791, 1125, 1277, 1318, 1465, 1963, 2428
RseI	CAYNNNNRTG	4 cut(s)	726, 1058, 1376, 1541
SatI	GCNGC	8 cut(s)	24, 152, 450, 591, 1084, 1240, 1515, 2061
Sau3AI	GATC	7 cut(s)	480, 648, 874, 1288, 1738, 1835, 2083
Sau96I	GGNCC	3 cut(s)	534, 1311, 1546
ScaI	AGTACT	1 cut(s)	1964
SchI	GAGTC	4 cut(s)	541, 820, 1310, 1425
ScrFI	CCNGG	3 cut(s)	246, 1754, 2041
SduI	GDGCHC	3 cut(s)	459, 1699, 1959
SfaNI	GCATC	4 cut(s)	463, 514, 638, 1924
SfcI	CTRYAG	2 cut(s)	64, 1411
SfuI	TTCGAA	2 cut(s)	998, 2120
SinI	GGWCC	3 cut(s)	534, 1311, 1546
SmiMI	CAYNNNNRTG	4 cut(s)	726, 1058, 1376, 1541
SmlI	CTYRAG	4 cut(s)	920, 1177, 1651, 1958
SmoI	CTYRAG	4 cut(s)	920, 1177, 1651, 1958
SpeI	ACTAGT	1 cut(s)	1826
SsiI	CCGC	4 cut(s)	149, 152, 169, 351
SspI	AATATT	1 cut(s)	686
SspMI	CTAG	9 cut(s)	240, 303, 603, 771, 785, 1511, 1749, 1827, 2150
StyD4I	CCNGG	3 cut(s)	244, 1752, 2039
StyI	CCWWGG	3 cut(s)	602, 1078, 1942
TaaI	ACNGT	5 cut(s)	820, 1246, 1501, 2006, 2296
TaiI	ACGT	2 cut(s)	628, 835
TaqI	TCGA	6 cut(s)	134, 255, 836, 998, 2120, 2371
TatI	WGTACW	6 cut(s)	183, 790, 1124, 1317, 1962, 2427
TauI	GCSGC	1 cut(s)	154
TfiI	GAWTC	5 cut(s)	572, 662, 811, 975, 2125
TscAI	CASTG	8 cut(s)	202, 1506, 1582, 1722, 1910, 2070, 2451, 2457
TseFI	GTSAC	4 cut(s)	305, 802, 1024, 1711
TseI	GCWGC	7 cut(s)	23, 449, 590, 1083, 1239, 1514, 2060
Tsp45I	GTSAC	4 cut(s)	305, 802, 1024, 1711
TspGWI	ACGGA	1 cut(s)	2357
TspRI	CASTG	8 cut(s)	202, 1506, 1582, 1722, 1910, 2070, 2451, 2457
Tth111I	GACNNNGTC	1 cut(s)	1022
Vha464I	CTTAAG	2 cut(s)	920, 1177
VpaK11BI	GGWCC	3 cut(s)	534, 1311, 1546
XapI	RAATTY	5 cut(s)	17, 881, 982, 2031, 2383
XceI	RCATGY	2 cut(s)	725, 1375
XcmI	CCANNNNNNNNNTGG	3 cut(s)	331, 583, 1949
XmaJI	CCTAGG	1 cut(s)	602
XmiI	GTMKAC	1 cut(s)	2169
XmnI	GAANNNNTTC	1 cut(s)	2387
XspI	CTAG	9 cut(s)	240, 303, 603, 771, 785, 1511, 1749, 1827, 2150
ZrmI	AGTACT	1 cut(s)	1964
Zsp2I	ATGCAT	1 cut(s)	2325

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.