Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0001425

Physical Location & Seq

Genomic Coordinates Forward (+)

4775222 .. 4779764

Gene Structure 4543 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1068000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2400 bp

ATGAAGTTTGGGAAGGAATTTTTGGCACAGATGGTGCCGGAATGGAGAGCTGCATACATGGATTACGGGTACTTAAAATCCCTCTTAAAAGAAATCCAACTCTCCAAGCATAGAAACAACCCCGATCCACTGGCCGCCGCTTCCACGCCCCACAGTCAAGCCCGAAAGCGGAGGCTCGCGTTGTACAGAACCTTCAGCGGTCTGACAAAAAGCAGGCACGCCCAGCAGCCCAGCAGCTCGTCTTCCACCTTTGGTGGTGTCGACATCGAGAGCCAGGCCATTCTTGTTCACTCCGTCAACGAAAACGACTCCGAGAGCTACCAGACGACGTTTGTGATGGCGGCGGAGGAAGGCGGTGTTCAGGAGCTGGAGTACTTCAAGAAGCTCGACAATGAGTTTAATAAAGTTGACAAGTTTTATAGGTCGAAGGTTGACGAGGTGATGAAGGAAGCTGCAGTTCTGAACAAGCAAATGGACGCTTTGATTGCGTTCCGGATCAAAGTGGAGAACCCTCAGAGAATGTTCGATTGGTCGGGGGAGATGACTCGCCTTGCTTCCGATGTTGCCACGTCTACCGCTGCATTGGCTGCCGCCAGCCCACACGGTGCCAGAGCAAGCAGGCGGGTACGTGCTATGGATGCGATTGAAGAGCGCCGATCAAACAGTTCGGGTGATGAAGAAAAAGATGACAAAAAGAGTGGAGACGTTGAGATGGAAGTGATGAAGAAGTCGGAGAGCAGGAGAGGCACTAGGCCTGCGCCACTGGATATACTAGACCGTGTGAAAATGAATCACGCGGTTGAGACGCCGTGTTCCACCATCAAAGGCTTCCTCAACGTGGCTCCGCAAACGGAGCTCAAGTTCAGCAGGGTTAATCTCAACAAAGTTGAAGAACAGTTGAGGGGCGCTTTCGTTGTATTTTACCAGAAGCTTCGGCTTCTGAAGAGCTACGGATTTTTGAATACGTTGGCTATCTCGAAGATCATGAAGAAATACGATAAGGTGGCTTCGAGAGATGCATCAAAATCTTACATGAACATGGTGGATAACTCGCACCTTGGCAGCTCCGACGAGGTTACCAAGCTTATGGAGAGGGTTGAAACTACATTCATCAAGCATTTCTCGAACTCAAATCGCCGAAAAGGAATGGCGGTCTTGAGGCCAAAACCGAAGGTGGAAAGACACAGGATAACATTCGCGATGGGTTGCTTTGCTGGCTGCACAGCTGCTCTCATATTGGCGCTTGTTTTGATCACTCGTGCTCGAAAGATTATGGATGAGCCGGGGGGAAGTCAATACATGGAAAACATGTTCCCCCTATACAGCATGTTCGGATTCATTGTTCTGCACATGCTTATGTATGCCGGAAATATATACTTTTGGCGGCGGTTCAGAGTCAATTACTCTTTTATATTCGGTTTCAAGCAAGGAACCGAGCTGGGATACAGAGAGGTACTCCTTCTGAGTTTTGGTGTGGCAGTGCTAGCACTAGCATCTGTGCTCTCAAATCTTGACATGGAGATGGACCCGAAAACCAAAGATTACAAAGAACTAACCGAACTTCTCCCGCTCTTCTTGCTCCTGCTTCTGATTGTGATATTATTATGCCCCTTCAACATCATATATCGCTCGAGTCGCTGCTTCTCCCTTGTTTGTGTGTTCCACAGCATCTGTGCTCCTCTCTATAAGGTCACACTGCCAGATTTCTTCTTGGCAGATCAGTTAACTAGCCAGGTGGAAGCCTTTAGAAGTCTGCAATTCTACATTTGCTATTATGGCTGGGGAGACTACAAGGTCAGGGAAACAACTTGCAGATCAAGTGACGTCTTCAAAATTTTCAGTTTCCTCGTTGCGTGCATTCCATTTTGGTCCCGCCTCCTTCAGTGCATCCGCCGCTTGGTTGACGAGAAAGATCCGATGCAAGGTTACAATGGACTGAAATTTTTCTTAATCATAGTATCAGTTAGCATGAGGATAGCCCACACACTTACCGACGACGTGAACTGGAAAGTTCTTGCTGGGATTTTCTCAATCGTTGCAGCCATATTTGCAACATATTGGGATCTTGTTGTGGACTGGGGACTTCTGCAACGCCGCTCCAAGAACCGATGGTTGAGAGACAAACTCTTGGTCCCTTACAAAAGCGTGTACTTCATAGCGATGGTATTGAATGTACTGCTGAGATTTGCCTGGCTGCAGACAGTTCTGAAATTCAATGTCTCCTTCATGCATAGACAGACAATGATCACGGTTGTGGGGAGCTTGGAGATAATTCGTCGAGGGATATGGAATTTTTTCCGGTTGGAGAATGAGCATCTGAACAATGTCGGAAAGTACAGAGCATTCAAGTCAGTGCCACTGCCCTTCAACTATGATGAAGACCATGACAAACATTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0008150 GO:0012505 GO:0016020 GO:0031984 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048878 GO:0050801 GO:0055062 GO:0055065 GO:0055069 GO:0055076 GO:0055080 GO:0055081 GO:0055083 GO:0065007 GO:0065008 GO:0071944 GO:0072505 GO:0072506 GO:0072507 GO:0098771 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EXS SPX

Protein Analysis

800

Amino Acids

91.99

Weight (kDa)

9.43

Isoelectric Point (pI)

41.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPX	PF03105	1 - 348	4.1e-83	SPX domain
EXS	PF03124	437 - 773	1.2e-97	EXS family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001425)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14040 AT1G26730 AT1G26730 AT1G35350 AT1G35350 AT2G03240 AT2G03260 AT2G03260
fragaria_vesca	FvH4_4g21230 FvH4_4g30900 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930
malus_domestica	MD00G1081000.v1.1 MD00G1081300.v1.1 MD00G1200800.v1.1 MD16G1068000.v1.1
prunus_persica	Prupe.1G278700_v2.0.a1 Prupe.1G278700_v2.0.a1 Prupe.1G278700_v2.0.a1 Prupe.1G278800_v2.0.a1
pyrus_communis	pycom13g06110 pycom13g06120 pycom16g05960
rosa_chinensis	RchiOBHm_Chr4g0439231
rosa_laevigata	RLG00000006286
rosa_multiflora	Rmu_sc0006598.1_g000012 Rmu_sc0007941.1_g000004 Rmu_ssc0000171.1_g000025
rosa_roxburghii	Rroxscaffold_2G00115520 Rroxscaffold_2G00115990 Rroxscaffold_5G00380220
rosa_rugosa	Rorug04G0317100 Rorug04G0317200
rosa_samantha	Rh4AG367700 Rh4BG379600 Rh4CG393900 Rh4DG373900
rosa_wichuraiana	Rw0G005620 Rw0G011630 Rw5G028550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1793
AatII	GACGTC	1 cut(s)	1827
AccB1I	GGYRCC	2 cut(s)	34, 605
AccBSI	CCGCTC	2 cut(s)	1570, 2097
AccI	GTMKAC	2 cut(s)	261, 572
AccII	CGCG	3 cut(s)	179, 797, 1199
AccIII	TCCGGA	1 cut(s)	492
AclWI	GGATC	4 cut(s)	119, 503, 1907, 2070
AcoI	YGGCCR	1 cut(s)	132
AcsI	RAATTY	5 cut(s)	17, 1833, 1940, 2210, 2290
AcuI	CTGAAG	3 cut(s)	178, 962, 1865
AcyI	GRCGYC	2 cut(s)	806, 1824
AdeI	CACNNNGTG	1 cut(s)	605
AfaI	GTAC	8 cut(s)	71, 185, 374, 627, 1455, 2150, 2175, 2336
AfiI	CCNNNNNNNGG	4 cut(s)	168, 838, 1897, 1922
AflIII	ACRYGT	1 cut(s)	1308
AjiI	CACGTC	2 cut(s)	570, 1999
AjnI	CCWGG	3 cut(s)	273, 1731, 2189
AjuI	GAANNNNNNNTTGG	3 cut(s)	37, 511, 543
AleI	CACNNNNGTG	1 cut(s)	2252
AloI	GAACNNNNNNTCC	6 cut(s)	845, 877, 1295, 1326, 1327, 1358
Alw21I	GWGCWC	4 cut(s)	858, 1264, 1503, 1678
Alw26I	GTCTC	5 cut(s)	696, 797, 1779, 2112, 2224
AlwI	GGATC	4 cut(s)	119, 503, 1907, 2070
AlwNI	CAGNNNCTG	2 cut(s)	367, 1671
Ama87I	CYCGRG	1 cut(s)	1630
Aor13HI	TCCGGA	1 cut(s)	492
AoxI	GGCC	4 cut(s)	132, 276, 752, 1160
ApoI	RAATTY	5 cut(s)	17, 1833, 1940, 2210, 2290
ArsI	GACNNNNNNTTYG	2 cut(s)	2115, 2147
Asp700I	GAANNNNTTC	2 cut(s)	1943, 2294
AspLEI	GCGC	4 cut(s)	654, 760, 908, 1243
AspS9I	GGNCC	3 cut(s)	1525, 1869, 2131
AsuC2I	CCSGG	1 cut(s)	1284
AsuHPI	GGTGA	2 cut(s)	451, 683
AsuNHI	GCTAGC	1 cut(s)	1483
AvaI	CYCGRG	1 cut(s)	1630
AvaII	GGWCC	3 cut(s)	1525, 1869, 2131
BanI	GGYRCC	2 cut(s)	34, 605
BanII	GRGCYC	1 cut(s)	858
BarI	GAAGNNNNNNTAC	2 cut(s)	176, 208
BauI	CACGAG	1 cut(s)	1257
BbsI	GAAGAC	3 cut(s)	234, 1819, 2385
Bbv12I	GWGCWC	4 cut(s)	858, 1264, 1503, 1678
BccI	CCATC	8 cut(s)	25, 331, 706, 827, 1195, 1516, 2103, 2155
BceAI	ACGGC	1 cut(s)	793
BciT130I	CCWGG	3 cut(s)	275, 1733, 2191
BciVI	GTATCC	1 cut(s)	1436
BclI	TGATCA	2 cut(s)	1251, 2244
BcnI	CCSGG	1 cut(s)	1284
BcoDI	GTCTC	5 cut(s)	696, 797, 1779, 2112, 2224
BfaI	CTAG	5 cut(s)	750, 773, 1484, 1490, 1728
BfmI	CTRYAG	2 cut(s)	453, 2195
BfoI	RGCGCY	3 cut(s)	655, 909, 1244
BfuI	GTATCC	1 cut(s)	1436
BmcAI	AGTACT	1 cut(s)	374
Bme1390I	CCNGG	4 cut(s)	275, 1284, 1733, 2191
Bme18I	GGWCC	3 cut(s)	1525, 1869, 2131
BmeT110I	CYCGRG	1 cut(s)	1630
BmgBI	CACGTC	2 cut(s)	570, 1999
BmgT120I	GGNCC	3 cut(s)	1525, 1869, 2131
BmiI	GGNNCC	7 cut(s)	36, 607, 843, 1432, 1527, 1871, 2133
BmrFI	CCNGG	4 cut(s)	275, 1284, 1733, 2191
BmrI	ACTGGG	1 cut(s)	2086
BmsI	GCATC	8 cut(s)	628, 1006, 1028, 1502, 1677, 1896, 1908, 2323
BmtI	GCTAGC	1 cut(s)	1487
BmuI	ACTGGG	1 cut(s)	2086
BpiI	GAAGAC	3 cut(s)	234, 1819, 2385
BplI	GAGNNNNNCTC	4 cut(s)	1440, 1472, 2109, 2141
BpmI	CTGGAG	1 cut(s)	389
BpuEI	CTTGAG	2 cut(s)	842, 1177
BpuMI	CCSGG	1 cut(s)	1284
BsaAI	YACGTR	1 cut(s)	629
BsaHI	GRCGYC	2 cut(s)	806, 1824
BsaJI	CCNNGG	2 cut(s)	1057, 1283
BsaWI	WCCGGW	2 cut(s)	492, 2298
BsaXI	ACNNNNNCTCC	4 cut(s)	356, 386, 845, 875
Bsc4I	CCNNNNNNNGG	4 cut(s)	168, 838, 1897, 1922
Bse1I	ACTGG	4 cut(s)	135, 768, 2009, 2081
BseAI	TCCGGA	1 cut(s)	492
BseBI	CCWGG	3 cut(s)	275, 1733, 2191
BseDI	CCNNGG	2 cut(s)	1057, 1283
BseGI	GGATG	3 cut(s)	643, 1282, 1887
BseLI	CCNNNNNNNGG	4 cut(s)	168, 838, 1897, 1922
BseMII	CTCAG	3 cut(s)	527, 1454, 2171
BseNI	ACTGG	4 cut(s)	135, 768, 2009, 2081
BseRI	GAGGAG	1 cut(s)	1668
BseYI	CCCAGC	5 cut(s)	222, 230, 1438, 1779, 2018
BsgI	GTGCAG	2 cut(s)	1204, 1331
Bsh1236I	CGCG	3 cut(s)	179, 797, 1199
BshFI	GGCC	4 cut(s)	134, 278, 754, 1162
BshNI	GGYRCC	2 cut(s)	34, 605
BsiHKAI	GWGCWC	4 cut(s)	858, 1264, 1503, 1678
BsiHKCI	CYCGRG	1 cut(s)	1630
BsiSI	CCGG	5 cut(s)	38, 493, 1283, 1365, 2299
BslFI	GGGAC	3 cut(s)	1855, 2094, 2117
BslI	CCNNNNNNNGG	4 cut(s)	168, 838, 1897, 1922
BsmAI	GTCTC	5 cut(s)	696, 797, 1779, 2112, 2224
BsmBI	CGTCTC	2 cut(s)	696, 797
BsmFI	GGGAC	3 cut(s)	1855, 2094, 2117
BsmI	GAATGC	2 cut(s)	1857, 2342
BsnI	GGCC	4 cut(s)	134, 278, 754, 1162
BsoBI	CYCGRG	1 cut(s)	1630
Bsp1286I	GDGCHC	4 cut(s)	858, 1264, 1503, 1678
Bsp13I	TCCGGA	1 cut(s)	492
Bsp1407I	TGTACA	1 cut(s)	183
Bsp68I	TCGCGA	1 cut(s)	1199
BspANI	GGCC	4 cut(s)	134, 278, 754, 1162
BspCNI	CTCAG	3 cut(s)	526, 1455, 2172
BspEI	TCCGGA	1 cut(s)	492
BspFNI	CGCG	3 cut(s)	179, 797, 1199
BspHI	TCATGA	1 cut(s)	984
BspLI	GGNNCC	7 cut(s)	36, 607, 843, 1432, 1527, 1871, 2133
BspMAI	CTGCAG	2 cut(s)	457, 2199
BspOI	GCTAGC	1 cut(s)	1487
BspPI	GGATC	4 cut(s)	119, 503, 1907, 2070
BspQI	GCTCTTC	3 cut(s)	642, 938, 1577
BspT107I	GGYRCC	2 cut(s)	34, 605
BsrBI	CCGCTC	2 cut(s)	1570, 2097
BsrGI	TGTACA	1 cut(s)	183
BsrI	ACTGG	4 cut(s)	135, 768, 2009, 2081
BssECI	CCNNGG	2 cut(s)	1057, 1283
BssNI	GRCGYC	2 cut(s)	806, 1824
BssSI	CACGAG	1 cut(s)	1257
BssT1I	CCWWGG	1 cut(s)	1057
Bst2BI	CACGAG	1 cut(s)	1257
Bst2UI	CCWGG	3 cut(s)	275, 1733, 2191
Bst4CI	ACNGT	7 cut(s)	155, 605, 665, 779, 897, 2203, 2251
Bst6I	CTCTTC	3 cut(s)	642, 938, 1577
BstACI	GRCGYC	2 cut(s)	806, 1824
BstAPI	GCANNNNNTGC	1 cut(s)	587
BstAUI	TGTACA	1 cut(s)	183
BstBAI	YACGTR	1 cut(s)	629
BstDEI	CTNAG	3 cut(s)	513, 1463, 2180
BstEII	GGTNACC	1 cut(s)	1075
BstF5I	GGATG	3 cut(s)	643, 1282, 1887
BstFNI	CGCG	3 cut(s)	179, 797, 1199
BstH2I	RGCGCY	3 cut(s)	655, 909, 1244
BstHHI	GCGC	4 cut(s)	654, 760, 908, 1243
BstMAI	GTCTC	5 cut(s)	696, 797, 1779, 2112, 2224
BstNI	CCWGG	3 cut(s)	275, 1733, 2191
BstNSI	RCATGY	3 cut(s)	1312, 1330, 1354
BstPI	GGTNACC	1 cut(s)	1075
BstSCI	CCNGG	4 cut(s)	273, 1282, 1731, 2189
BstSFI	CTRYAG	2 cut(s)	453, 2195
BstUI	CGCG	3 cut(s)	179, 797, 1199
BstV2I	GAAGAC	3 cut(s)	234, 1819, 2385
BstX2I	RGATCY	2 cut(s)	1912, 2062
BstXI	CCANNNNNNTGG	1 cut(s)	1087
BstYI	RGATCY	2 cut(s)	1912, 2062
BsuI	GTATCC	1 cut(s)	1436
BsuRI	GGCC	4 cut(s)	134, 278, 754, 1162
BtgZI	GCGATG	2 cut(s)	1214, 2174
BtrI	CACGTC	2 cut(s)	570, 1999
BtsCI	GGATG	3 cut(s)	643, 1282, 1887
BtsI	GCAGTG	3 cut(s)	1485, 1694, 2357
BtsIMutI	CAGTG	7 cut(s)	128, 761, 1485, 1694, 1889, 2357, 2358
BtuMI	TCGCGA	1 cut(s)	1199
CaiI	CAGNNNCTG	2 cut(s)	367, 1671
CciI	TCATGA	1 cut(s)	984
CfoI	GCGC	4 cut(s)	654, 760, 908, 1243
Cfr13I	GGNCC	3 cut(s)	1525, 1869, 2131
CseI	GACGC	2 cut(s)	485, 814
Csp6I	GTAC	8 cut(s)	70, 184, 373, 626, 1454, 2149, 2174, 2335
CspCI	CAANNNNNGTGG	2 cut(s)	679, 714
CviQI	GTAC	8 cut(s)	70, 184, 373, 626, 1454, 2149, 2174, 2335
DdeI	CTNAG	3 cut(s)	513, 1463, 2180
DraIII	CACNNNGTG	1 cut(s)	605
DrdI	GACNNNNNNGTC	1 cut(s)	1793
DseDI	GACNNNNNNGTC	1 cut(s)	1793
EaeI	YGGCCR	1 cut(s)	132
Eam1104I	CTCTTC	3 cut(s)	642, 938, 1577
EarI	CTCTTC	3 cut(s)	642, 938, 1577
EciI	GGCGGA	2 cut(s)	359, 1880
Ecl136II	GAGCTC	1 cut(s)	856
Eco130I	CCWWGG	1 cut(s)	1057
Eco147I	AGGCCT	1 cut(s)	754
Eco24I	GRGCYC	1 cut(s)	858
Eco47I	GGWCC	3 cut(s)	1525, 1869, 2131
Eco53kI	GAGCTC	1 cut(s)	856
Eco57I	CTGAAG	3 cut(s)	178, 962, 1865
Eco88I	CYCGRG	1 cut(s)	1630
Eco91I	GGTNACC	1 cut(s)	1075
EcoICRI	GAGCTC	1 cut(s)	856
EcoO65I	GGTNACC	1 cut(s)	1075
EcoRII	CCWGG	3 cut(s)	273, 1731, 2189
EcoT14I	CCWWGG	1 cut(s)	1057
EcoT22I	ATGCAT	2 cut(s)	1021, 2232
EcoT38I	GRGCYC	1 cut(s)	858
ErhI	CCWWGG	1 cut(s)	1057
Esp3I	CGTCTC	2 cut(s)	696, 797
FaqI	GGGAC	3 cut(s)	1855, 2094, 2117
FauI	CCCGC	3 cut(s)	615, 1575, 1880
FbaI	TGATCA	2 cut(s)	1251, 2244
FblI	GTMKAC	2 cut(s)	261, 572
FokI	GGATG	3 cut(s)	650, 1289, 1874
FriOI	GRGCYC	1 cut(s)	858
FspBI	CTAG	5 cut(s)	750, 773, 1484, 1490, 1728
GlaI	GCGC	4 cut(s)	653, 759, 907, 1242
GsaI	CCCAGC	5 cut(s)	226, 234, 1442, 1783, 2022
GsuI	CTGGAG	1 cut(s)	389
HaeII	RGCGCY	3 cut(s)	655, 909, 1244
HaeIII	GGCC	4 cut(s)	134, 278, 754, 1162
HapII	CCGG	5 cut(s)	38, 493, 1283, 1365, 2299
HgaI	GACGC	2 cut(s)	485, 814
HhaI	GCGC	4 cut(s)	654, 760, 908, 1243
Hin1I	GRCGYC	2 cut(s)	806, 1824
Hin6I	GCGC	4 cut(s)	652, 758, 906, 1241
HinP1I	GCGC	4 cut(s)	652, 758, 906, 1241
HincII	GTYRAC	6 cut(s)	262, 298, 409, 433, 1725, 1903
HindII	GTYRAC	6 cut(s)	262, 298, 409, 433, 1725, 1903
HindIII	AAGCTT	2 cut(s)	929, 1082
HinfI	GANTC	6 cut(s)	308, 544, 790, 1335, 1395, 1633
HpaI	GTTAAC	1 cut(s)	1725
HpaII	CCGG	5 cut(s)	38, 493, 1283, 1365, 2299
HphI	GGTGA	2 cut(s)	451, 683
Hpy99I	CGWCG	5 cut(s)	331, 1073, 1997, 2000, 2280
HpyCH4III	ACNGT	7 cut(s)	155, 605, 665, 779, 897, 2203, 2251
HpyCH4IV	ACGT	8 cut(s)	329, 569, 628, 705, 837, 965, 1824, 1998
HpyF3I	CTNAG	3 cut(s)	513, 1463, 2180
HpySE526I	ACGT	8 cut(s)	329, 569, 628, 705, 837, 965, 1824, 1998
Hsp92I	GRCGYC	2 cut(s)	806, 1824
HspAI	GCGC	4 cut(s)	652, 758, 906, 1241
Kpn2I	TCCGGA	1 cut(s)	492
Ksp22I	TGATCA	2 cut(s)	1251, 2244
KspAI	GTTAAC	1 cut(s)	1725
LguI	GCTCTTC	3 cut(s)	642, 938, 1577
LmnI	GCTCC	8 cut(s)	364, 847, 853, 1070, 1584, 1681, 2102, 2259
LweI	GCATC	8 cut(s)	628, 1006, 1028, 1502, 1677, 1896, 1908, 2323
MaeI	CTAG	5 cut(s)	750, 773, 1484, 1490, 1728
MaeII	ACGT	8 cut(s)	329, 569, 628, 705, 837, 965, 1824, 1998
MaeIII	GTNAC	4 cut(s)	1075, 1690, 1820, 1925
MbiI	CCGCTC	2 cut(s)	1570, 2097
MflI	RGATCY	2 cut(s)	1912, 2062
MhlI	GDGCHC	4 cut(s)	858, 1264, 1503, 1678
MluCI	AATT	8 cut(s)	17, 1399, 1757, 1833, 1940, 2210, 2271, 2290
MlyI	GAGTC	4 cut(s)	302, 538, 1404, 1642
MmeI	TCCRAC	5 cut(s)	121, 711, 1092, 2283, 2308
Mph1103I	ATGCAT	2 cut(s)	1021, 2232
MroI	TCCGGA	1 cut(s)	492
MroXI	GAANNNNTTC	2 cut(s)	1943, 2294
MseI	TTAA	6 cut(s)	74, 86, 399, 873, 1724, 1949
MslI	CAYNNNNRTG	5 cut(s)	1037, 1355, 1520, 2159, 2252
MspA1I	CMGCKG	3 cut(s)	198, 578, 1226
MspI	CCGG	5 cut(s)	38, 493, 1283, 1365, 2299
MspR9I	CCNGG	4 cut(s)	275, 1284, 1733, 2191
Mva1269I	GAATGC	2 cut(s)	1857, 2342
MvaI	CCWGG	3 cut(s)	275, 1733, 2191
MvnI	CGCG	3 cut(s)	179, 797, 1199
NciI	CCSGG	1 cut(s)	1284
NheI	GCTAGC	1 cut(s)	1483
NlaIV	GGNNCC	7 cut(s)	36, 607, 843, 1432, 1527, 1871, 2133
NmuCI	GTSAC	2 cut(s)	1690, 1820
NruI	TCGCGA	1 cut(s)	1199
NsiI	ATGCAT	2 cut(s)	1021, 2232
NspI	RCATGY	3 cut(s)	1312, 1330, 1354
OliI	CACNNNNGTG	1 cut(s)	2252
PaeR7I	CTCGAG	1 cut(s)	1630
PagI	TCATGA	1 cut(s)	984
PceI	AGGCCT	1 cut(s)	754
PciI	ACATGT	1 cut(s)	1308
PciSI	GCTCTTC	3 cut(s)	642, 938, 1577
PctI	GAATGC	2 cut(s)	1857, 2342
PdmI	GAANNNNTTC	2 cut(s)	1943, 2294
PfeI	GAWTC	2 cut(s)	790, 1335
PleI	GAGTC	4 cut(s)	302, 538, 1403, 1641
PpsI	GAGTC	4 cut(s)	302, 538, 1403, 1641
Ppu21I	YACGTR	1 cut(s)	629
PscI	ACATGT	1 cut(s)	1308
Psp124BI	GAGCTC	1 cut(s)	858
Psp6I	CCWGG	3 cut(s)	273, 1731, 2189
PspEI	GGTNACC	1 cut(s)	1075
PspFI	CCCAGC	5 cut(s)	222, 230, 1438, 1779, 2018
PspGI	CCWGG	3 cut(s)	273, 1731, 2189
PspN4I	GGNNCC	7 cut(s)	36, 607, 843, 1432, 1527, 1871, 2133
PspPI	GGNCC	3 cut(s)	1525, 1869, 2131
PspXI	VCTCGAGB	1 cut(s)	1630
PstI	CTGCAG	2 cut(s)	457, 2199
PstNI	CAGNNNCTG	2 cut(s)	367, 1671
PsuI	RGATCY	2 cut(s)	1912, 2062
PvuII	CAGCTG	1 cut(s)	1226
RruI	TCGCGA	1 cut(s)	1199
RsaI	GTAC	8 cut(s)	71, 185, 374, 627, 1455, 2150, 2175, 2336
RsaNI	GTAC	8 cut(s)	70, 184, 373, 626, 1454, 2149, 2174, 2335
RseI	CAYNNNNRTG	5 cut(s)	1037, 1355, 1520, 2159, 2252
SacI	GAGCTC	1 cut(s)	858
SalI	GTCGAC	1 cut(s)	260
SapI	GCTCTTC	3 cut(s)	642, 938, 1577
SaqAI	TTAA	6 cut(s)	74, 86, 399, 873, 1724, 1949
Sau96I	GGNCC	3 cut(s)	1525, 1869, 2131
ScaI	AGTACT	1 cut(s)	374
SchI	GAGTC	4 cut(s)	302, 538, 1404, 1642
ScrFI	CCNGG	4 cut(s)	275, 1284, 1733, 2191
SduI	GDGCHC	4 cut(s)	858, 1264, 1503, 1678
SfaNI	GCATC	8 cut(s)	628, 1006, 1028, 1502, 1677, 1896, 1908, 2323
SfcI	CTRYAG	2 cut(s)	453, 2195
Sfr274I	CTCGAG	1 cut(s)	1630
SinI	GGWCC	3 cut(s)	1525, 1869, 2131
SlaI	CTCGAG	1 cut(s)	1630
SmiMI	CAYNNNNRTG	5 cut(s)	1037, 1355, 1520, 2159, 2252
SmlI	CTYRAG	3 cut(s)	857, 1156, 1630
SmoI	CTYRAG	3 cut(s)	857, 1156, 1630
Sse9I	AATT	8 cut(s)	17, 1399, 1757, 1833, 1940, 2210, 2271, 2290
SseBI	AGGCCT	1 cut(s)	754
SspMI	CTAG	5 cut(s)	750, 773, 1484, 1490, 1728
SstI	GAGCTC	1 cut(s)	858
StuI	AGGCCT	1 cut(s)	754
StyD4I	CCNGG	4 cut(s)	273, 1282, 1731, 2189
StyI	CCWWGG	1 cut(s)	1057
TaaI	ACNGT	7 cut(s)	155, 605, 665, 779, 897, 2203, 2251
TaiI	ACGT	8 cut(s)	332, 572, 631, 708, 840, 968, 1827, 2001
TasI	AATT	8 cut(s)	17, 1399, 1757, 1833, 1940, 2210, 2271, 2290
TatI	WGTACW	5 cut(s)	183, 372, 2148, 2173, 2334
TauI	GCSGC	7 cut(s)	137, 140, 344, 593, 1387, 1896, 2097
TfiI	GAWTC	2 cut(s)	790, 1335
Tru1I	TTAA	6 cut(s)	74, 86, 399, 873, 1724, 1949
Tru9I	TTAA	6 cut(s)	74, 86, 399, 873, 1724, 1949
TscAI	CASTG	7 cut(s)	135, 768, 1485, 1701, 1889, 2358, 2364
TseFI	GTSAC	2 cut(s)	1690, 1820
Tsp45I	GTSAC	2 cut(s)	1690, 1820
TspGWI	ACGGA	3 cut(s)	283, 866, 966
TspRI	CASTG	7 cut(s)	135, 768, 1485, 1701, 1889, 2358, 2364
VpaK11BI	GGWCC	3 cut(s)	1525, 1869, 2131
XapI	RAATTY	5 cut(s)	17, 1833, 1940, 2210, 2290
XceI	RCATGY	3 cut(s)	1312, 1330, 1354
XhoI	CTCGAG	1 cut(s)	1630
XmiI	GTMKAC	2 cut(s)	261, 572
XmnI	GAANNNNTTC	2 cut(s)	1943, 2294
XspI	CTAG	5 cut(s)	750, 773, 1484, 1490, 1728
ZraI	GACGTC	1 cut(s)	1825
ZrmI	AGTACT	1 cut(s)	374
Zsp2I	ATGCAT	2 cut(s)	1021, 2232

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.