Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0001425

Physical Location & Seq

Genomic Coordinates Reverse (-)

42611969 .. 42615253

Gene Structure 3285 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00115990.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1977 bp

ATGGCTGCCGAGGAAGGCGGGGTTATGGAGTTGGAGTATTTCAGAAGGGTTGATGATGAGTTCAACAAAGTTGAGAAGTTTTATAGGGGAAAAGTTGAAGAGGTCATGAAAGAAGCTGCTGTGCTTAACAAGCAAATGGACGCTTTGATCGCTTTTCGGATTAAGGTGGAGAATCCTCAGAGGCTGTTTGATTGGTCTGGCGAGATGACTCGTCTTGCTTCGGATGTTGCAGCTTCCACAGCTCAGTTGGCTGCTTCAACTCCTAGAGGTGCCAAAGCAAGCAGACATGCGGCTATGGCTATGGATGTGATTGAGGAGGGTGGACCAAGCAGCCAAGGGGAAAATTCCGGTGAGGATGATCAAGATGAGAAAGTGAAAGAAGAACATGTTGATAGAAATGTTAAGGTGGAGAAGCCAAAGAAGTTTAGAGGGTCTACACCTGCCCCACTAGATGTTCTAAGTCGTGTGACAATGAATCAAACCACTGAGACTCCACGTTCGACTATTAAAGGTTTCCTCAATGTGCCTCAGCAGACCGAGCTCAAATTCAGCAGGGAAAATCTCAGTAAAGTTGAAGAACAGCTTAAGAGGGCTTTCGTCGTATTTTACCAGAAACTTAGGCTTCTAAAGAGCTTTGTGTTCTTGAATACATTGGCATTTTCAAAGATCATGAAGAAATATGACAAGGTTACTTCAAGAAATACATTAAAACCGTACATGAAGATGGTAGATGACTCCTATCTTGGCAGCTCTGATGAGGTTACCAAGCTTATAGAGAGGGTTGAAAGTACATTCATCAAGCATTTCTCTAACTCAAATCGCCGGAAAGGGATGGCTGTCTTAAGGCCAAAGCCAAAGATAGAAAGACATAGGATAACATTTTTCATGGGTTGCTTTGCTGGCTGCACAGTTGCTCTCACATTAGCCCTGATTTTGATTGTACGTGCTCGCAACATTATGAATGAGTCAGGGAGGACCCAGTATATGGAGAGCATATTTCCCCTATACAGCTTGTTCGGATTCGTTATTCTACACATGATTATGTATGCTGGGAACATATACTTCTGGAGACGTTACAGAGTCAATTACTCTTTCATCTTTGGCTTCAAGCAAGGAACTGAGTTGGGATACAGAGAGGTCCTCCTTGTTAGTTTTGGTCTGGCAGTGCTAGCACTAGCTGCTGTTCTCTCAAATCTGGACATGGAAATGGACCCCCAGACCCAAGACTATAAAGCACTAACAGAACTACTCCCTCTCTTCTTGGTTTTGGTCACACTGCCAGATTTCTTCTTGGCTGATCAGTTCACTAGCCAGGTGCAAGCCATTAGAAGCTTGGAGTTCTACATTTGCTACTATGGTTGGGGAGACTATAAACGCAGAGAAACTAGTTGCAGATCAAGTGATGTTTTCAACACCTTTAGTTTCATCGTTGCTTGTATTCCATATTGGTCCCGCCTTCTTCAGTGCATCCGCCGCCTGTTTGAAGAGAAGGATCATCACCAAGGTTACAATGGACTCAAGTACTTCTTCACAATAGTAGCTGTTAGCATGAGGATAGCTTGCAATCTTAATAAGGATGTAAACTGGAAAATTCTTGCCGGGATATTTTCAATTATTGCTGCACTGTATGGAACATATTGGGATCTTGTTGTAGACTGGGGGCTTTTGCAACGTAGTTCAAAGAATCGTTGGTTGAGAGACAAACTCCTAATCCCTTACAAAAGTGTATATTTTGGAGCCATGGTGCTGAATGTGTTGCTGAGATTTGCTTGGTTGCAGACCGTTTTGGATTTTAATGTTTCTTTCATGCATAGACAAGCAATGATAGCAGTTGTGGCCAGTTTGGAGATAATTCGTCGAGGAATTTGGAGTTTTTTCAGGTTGGAGAATGAACATTTGAACAATGTTGGCAAGTATAGGGCATTCAAGTCAGTGCCACTTCCCTTCAACTATGATGAAGATTACAAACATCTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0008150 GO:0012505 GO:0016020 GO:0031984 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048878 GO:0050801 GO:0055062 GO:0055065 GO:0055069 GO:0055076 GO:0055080 GO:0055081 GO:0055083 GO:0065007 GO:0065008 GO:0071944 GO:0072505 GO:0072506 GO:0072507 GO:0098771 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EXS SPX

Protein Analysis

658

Amino Acids

76.25

Weight (kDa)

9.28

Isoelectric Point (pI)

41.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPX	PF03105	10 - 243	2.1e-55	SPX domain
EXS	PF03124	332 - 425	3.4e-15	EXS family
EXS	PF03124	421 - 633	2e-67	EXS family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001425)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14040 AT1G26730 AT1G26730 AT1G35350 AT1G35350 AT2G03240 AT2G03260 AT2G03260
fragaria_vesca	FvH4_4g21230 FvH4_4g30900 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930
malus_domestica	MD00G1081000.v1.1 MD00G1081300.v1.1 MD00G1200800.v1.1 MD16G1068000.v1.1
prunus_persica	Prupe.1G278700_v2.0.a1 Prupe.1G278700_v2.0.a1 Prupe.1G278700_v2.0.a1 Prupe.1G278800_v2.0.a1
pyrus_communis	pycom13g06110 pycom13g06120 pycom16g05960
rosa_chinensis	RchiOBHm_Chr4g0439231
rosa_laevigata	RLG00000006286
rosa_multiflora	Rmu_sc0006598.1_g000012 Rmu_sc0007941.1_g000004 Rmu_ssc0000171.1_g000025
rosa_roxburghii	Rroxscaffold_2G00115520 Rroxscaffold_2G00115990 Rroxscaffold_5G00380220
rosa_rugosa	Rorug04G0317100 Rorug04G0317200
rosa_samantha	Rh4AG367700 Rh4BG379600 Rh4CG393900 Rh4DG373900
rosa_wichuraiana	Rw0G005620 Rw0G011630 Rw5G028550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	448
Acc36I	ACCTGC	1 cut(s)	448
AccB1I	GGYRCC	1 cut(s)	269
AccB7I	CCANNNNNTGG	1 cut(s)	985
AccI	GTMKAC	2 cut(s)	434, 1653
AciI	CCGC	5 cut(s)	18, 290, 1453, 1471, 1474
AclWI	GGATC	2 cut(s)	1500, 1650
AcoI	YGGCCR	1 cut(s)	1836
AcsI	RAATTY	4 cut(s)	343, 545, 1590, 1863
AcuI	CTGAAG	1 cut(s)	1445
AfaI	GTAC	4 cut(s)	716, 790, 942, 1523
AfiI	CCNNNNNNNGG	1 cut(s)	985
AflII	CTTAAG	2 cut(s)	584, 841
AflIII	ACRYGT	1 cut(s)	385
AhlI	ACTAGT	1 cut(s)	1385
AjnI	CCWGG	1 cut(s)	1311
Alw21I	GWGCWC	2 cut(s)	543, 949
Alw26I	GTCTC	4 cut(s)	482, 1063, 1359, 1692
AlwI	GGATC	2 cut(s)	1500, 1650
AlwNI	CAGNNNCTG	1 cut(s)	184
AoxI	GGCC	2 cut(s)	845, 1836
ApeKI	GCWGC	9 cut(s)	5, 116, 230, 251, 330, 747, 903, 1178, 1619
ApoI	RAATTY	4 cut(s)	343, 545, 1590, 1863
ArsI	GACNNNNNNTTYG	2 cut(s)	481, 513
AspS9I	GGNCC	5 cut(s)	323, 975, 1138, 1210, 1449
AsuC2I	CCSGG	1 cut(s)	1600
AsuHPI	GGTGA	2 cut(s)	362, 1490
AsuNHI	GCTAGC	1 cut(s)	1168
AvaII	GGWCC	5 cut(s)	323, 975, 1138, 1210, 1449
BalI	TGGCCA	1 cut(s)	1838
BanI	GGYRCC	1 cut(s)	269
BanII	GRGCYC	1 cut(s)	543
Bbv12I	GWGCWC	2 cut(s)	543, 949
BbvCI	CCTCAGC	1 cut(s)	528
BbvI	GCAGC	8 cut(s)	103, 238, 242, 342, 759, 890, 1165, 1606
BccI	CCATC	2 cut(s)	718, 826
BciT130I	CCWGG	1 cut(s)	1313
BciVI	GTATCC	1 cut(s)	1121
BclI	TGATCA	2 cut(s)	358, 1297
BcnI	CCSGG	1 cut(s)	1600
BcoDI	GTCTC	4 cut(s)	482, 1063, 1359, 1692
BcuI	ACTAGT	1 cut(s)	1385
BfaI	CTAG	6 cut(s)	264, 449, 1169, 1175, 1308, 1386
BfmI	CTRYAG	1 cut(s)	1973
BfrI	CTTAAG	2 cut(s)	584, 841
BfuAI	ACCTGC	1 cut(s)	448
BfuI	GTATCC	1 cut(s)	1121
BmcAI	AGTACT	1 cut(s)	1523
Bme1390I	CCNGG	2 cut(s)	1313, 1600
Bme18I	GGWCC	5 cut(s)	323, 975, 1138, 1210, 1449
BmgT120I	GGNCC	5 cut(s)	323, 975, 1138, 1210, 1449
BmiI	GGNNCC	5 cut(s)	271, 977, 1212, 1451, 1738
BmrFI	CCNGG	2 cut(s)	1313, 1600
BmrI	ACTGGG	2 cut(s)	973, 1666
BmsI	GCATC	1 cut(s)	1476
BmtI	GCTAGC	1 cut(s)	1172
BmuI	ACTGGG	2 cut(s)	973, 1666
BplI	GAGNNNNNCTC	4 cut(s)	1125, 1157, 1689, 1721
BpmI	CTGGAG	1 cut(s)	1087
Bpu10I	CCTNAGC	1 cut(s)	528
BpuEI	CTTGAG	1 cut(s)	1502
BpuMI	CCSGG	1 cut(s)	1600
BsaAI	YACGTR	1 cut(s)	944
BsaJI	CCNNGG	4 cut(s)	9, 334, 1501, 1740
BsaWI	WCCGGW	1 cut(s)	347
BsaXI	ACNNNNNCTCC	6 cut(s)	20, 50, 475, 505, 1728, 1758
Bsc4I	CCNNNNNNNGG	1 cut(s)	985
Bse1I	ACTGG	4 cut(s)	979, 1589, 1661, 1839
Bse3DI	GCAATG	1 cut(s)	1827
BseBI	CCWGG	1 cut(s)	1313
BseDI	CCNNGG	4 cut(s)	9, 334, 1501, 1740
BseGI	GGATG	6 cut(s)	229, 310, 361, 837, 1467, 1582
BseLI	CCNNNNNNNGG	1 cut(s)	985
BseMI	GCAATG	1 cut(s)	1827
BseMII	CTCAG	7 cut(s)	191, 257, 477, 542, 577, 1110, 1751
BseNI	ACTGG	4 cut(s)	979, 1589, 1661, 1839
BseRI	GAGGAG	1 cut(s)	329
BseXI	GCAGC	8 cut(s)	103, 238, 242, 342, 759, 890, 1165, 1606
BseYI	CCCAGC	1 cut(s)	1049
BsgI	GTGCAG	2 cut(s)	889, 1605
BshFI	GGCC	2 cut(s)	847, 1838
BshNI	GGYRCC	1 cut(s)	269
BsiHKAI	GWGCWC	2 cut(s)	543, 949
BsiSI	CCGG	3 cut(s)	348, 823, 1599
BslFI	GGGAC	1 cut(s)	1435
BslI	CCNNNNNNNGG	1 cut(s)	985
BsmAI	GTCTC	4 cut(s)	482, 1063, 1359, 1692
BsmBI	CGTCTC	1 cut(s)	1063
BsmFI	GGGAC	1 cut(s)	1435
BsmI	GAATGC	1 cut(s)	1922
BsnI	GGCC	2 cut(s)	847, 1838
Bsp1286I	GDGCHC	2 cut(s)	543, 949
Bsp143I	GATC	7 cut(s)	147, 358, 666, 1297, 1394, 1492, 1642
Bsp19I	CCATGG	1 cut(s)	1740
BspACI	CCGC	5 cut(s)	18, 290, 1453, 1471, 1474
BspANI	GGCC	2 cut(s)	847, 1838
BspCNI	CTCAG	7 cut(s)	190, 256, 478, 541, 576, 1111, 1752
BspHI	TCATGA	2 cut(s)	105, 669
BspLI	GGNNCC	5 cut(s)	271, 977, 1212, 1451, 1738
BspMI	ACCTGC	1 cut(s)	448
BspOI	GCTAGC	1 cut(s)	1172
BspPI	GGATC	2 cut(s)	1500, 1650
BspT107I	GGYRCC	1 cut(s)	269
BspTI	CTTAAG	2 cut(s)	584, 841
BsrDI	GCAATG	1 cut(s)	1827
BsrI	ACTGG	4 cut(s)	979, 1589, 1661, 1839
BssECI	CCNNGG	4 cut(s)	9, 334, 1501, 1740
BssMI	GATC	7 cut(s)	147, 358, 666, 1297, 1394, 1492, 1642
BssT1I	CCWWGG	3 cut(s)	334, 1501, 1740
Bst2UI	CCWGG	1 cut(s)	1313
Bst4CI	ACNGT	4 cut(s)	714, 910, 1626, 1783
Bst6I	CTCTTC	3 cut(s)	93, 1262, 1479
BstAFI	CTTAAG	2 cut(s)	584, 841
BstAPI	GCANNNNNTGC	1 cut(s)	1178
BstBAI	YACGTR	1 cut(s)	944
BstC8I	GCNNGC	6 cut(s)	280, 901, 949, 1170, 1320, 1561
BstDEI	CTNAG	9 cut(s)	177, 243, 458, 486, 528, 563, 617, 1119, 1760
BstDSI	CCRYGG	1 cut(s)	1740
BstEII	GGTNACC	1 cut(s)	760
BstF5I	GGATG	6 cut(s)	229, 310, 361, 837, 1467, 1582
BstKTI	GATC	7 cut(s)	150, 361, 669, 1300, 1397, 1495, 1645
BstMAI	GTCTC	4 cut(s)	482, 1063, 1359, 1692
BstMBI	GATC	7 cut(s)	147, 358, 666, 1297, 1394, 1492, 1642
BstNI	CCWGG	1 cut(s)	1313
BstNSI	RCATGY	2 cut(s)	290, 389
BstPI	GGTNACC	1 cut(s)	760
BstSCI	CCNGG	2 cut(s)	1311, 1598
BstSFI	CTRYAG	1 cut(s)	1973
BstV1I	GCAGC	8 cut(s)	103, 238, 242, 342, 759, 890, 1165, 1606
BstX2I	RGATCY	1 cut(s)	1642
BstYI	RGATCY	1 cut(s)	1642
BsuI	GTATCC	1 cut(s)	1121
BsuRI	GGCC	2 cut(s)	847, 1838
BtgI	CCRYGG	1 cut(s)	1740
BtsCI	GGATG	6 cut(s)	229, 310, 361, 837, 1467, 1582
BtsI	GCAGTG	2 cut(s)	1170, 1274
BtsIMutI	CAGTG	6 cut(s)	483, 1170, 1274, 1469, 1622, 1938
BveI	ACCTGC	1 cut(s)	448
Cac8I	GCNNGC	6 cut(s)	280, 901, 949, 1170, 1320, 1561
CaiI	CAGNNNCTG	1 cut(s)	184
CciI	TCATGA	2 cut(s)	105, 669
Cfr13I	GGNCC	5 cut(s)	323, 975, 1138, 1210, 1449
CseI	GACGC	1 cut(s)	149
Csp6I	GTAC	4 cut(s)	715, 789, 941, 1522
CviQI	GTAC	4 cut(s)	715, 789, 941, 1522
DdeI	CTNAG	9 cut(s)	177, 243, 458, 486, 528, 563, 617, 1119, 1760
DpnI	GATC	7 cut(s)	149, 360, 668, 1299, 1396, 1494, 1644
DpnII	GATC	7 cut(s)	147, 358, 666, 1297, 1394, 1492, 1642
EaeI	YGGCCR	1 cut(s)	1836
Eam1104I	CTCTTC	3 cut(s)	93, 1262, 1479
EarI	CTCTTC	3 cut(s)	93, 1262, 1479
EciI	GGCGGA	1 cut(s)	1460
Ecl136II	GAGCTC	1 cut(s)	541
Eco130I	CCWWGG	3 cut(s)	334, 1501, 1740
Eco24I	GRGCYC	1 cut(s)	543
Eco47I	GGWCC	5 cut(s)	323, 975, 1138, 1210, 1449
Eco53kI	GAGCTC	1 cut(s)	541
Eco57I	CTGAAG	1 cut(s)	1445
Eco91I	GGTNACC	1 cut(s)	760
EcoICRI	GAGCTC	1 cut(s)	541
EcoO109I	RGGNCCY	2 cut(s)	975, 1138
EcoO65I	GGTNACC	1 cut(s)	760
EcoRII	CCWGG	1 cut(s)	1311
EcoT14I	CCWWGG	3 cut(s)	334, 1501, 1740
EcoT22I	ATGCAT	1 cut(s)	1812
EcoT38I	GRGCYC	1 cut(s)	543
ErhI	CCWWGG	3 cut(s)	334, 1501, 1740
Esp3I	CGTCTC	1 cut(s)	1063
FalI	AAGNNNNNCTT	4 cut(s)	567, 599, 1511, 1543
FaqI	GGGAC	1 cut(s)	1435
FauI	CCCGC	2 cut(s)	11, 1460
FbaI	TGATCA	2 cut(s)	358, 1297
FblI	GTMKAC	2 cut(s)	434, 1653
FokI	GGATG	6 cut(s)	236, 317, 368, 844, 1454, 1589
FriOI	GRGCYC	1 cut(s)	543
FspBI	CTAG	6 cut(s)	264, 449, 1169, 1175, 1308, 1386
GsaI	CCCAGC	1 cut(s)	1053
GsuI	CTGGAG	1 cut(s)	1087
HaeIII	GGCC	2 cut(s)	847, 1838
HapII	CCGG	3 cut(s)	348, 823, 1599
HgaI	GACGC	1 cut(s)	149
HindIII	AAGCTT	2 cut(s)	767, 1330
HpaII	CCGG	3 cut(s)	348, 823, 1599
HphI	GGTGA	2 cut(s)	362, 1490
Hpy166II	GTNNAC	5 cut(s)	323, 435, 1305, 1582, 1654
Hpy188I	TCNGA	6 cut(s)	44, 159, 180, 223, 754, 1019
Hpy188III	TCNNGA	7 cut(s)	106, 362, 643, 670, 696, 1066, 1196
Hpy8I	GTNNAC	5 cut(s)	323, 435, 1305, 1582, 1654
Hpy99I	CGWCG	2 cut(s)	602, 1860
HpyAV	CCTTC	5 cut(s)	8, 39, 1466, 1483, 1954
HpyCH4III	ACNGT	4 cut(s)	714, 910, 1626, 1783
HpyCH4IV	ACGT	4 cut(s)	496, 943, 1072, 1672
HpyF3I	CTNAG	9 cut(s)	177, 243, 458, 486, 528, 563, 617, 1119, 1760
HpySE526I	ACGT	4 cut(s)	496, 943, 1072, 1672
Ksp22I	TGATCA	2 cut(s)	358, 1297
Kzo9I	GATC	7 cut(s)	147, 358, 666, 1297, 1394, 1492, 1642
LmnI	GCTCC	1 cut(s)	1736
Lsp1109I	GCAGC	8 cut(s)	103, 238, 242, 342, 759, 890, 1165, 1606
LweI	GCATC	1 cut(s)	1476
MaeI	CTAG	6 cut(s)	264, 449, 1169, 1175, 1308, 1386
MaeII	ACGT	4 cut(s)	496, 943, 1072, 1672
MaeIII	GTNAC	6 cut(s)	466, 688, 760, 1073, 1270, 1505
MalI	GATC	7 cut(s)	149, 360, 668, 1299, 1396, 1494, 1644
MboI	GATC	7 cut(s)	147, 358, 666, 1297, 1394, 1492, 1642
MflI	RGATCY	1 cut(s)	1642
MhlI	GDGCHC	2 cut(s)	543, 949
MlsI	TGGCCA	1 cut(s)	1838
MluCI	AATT	7 cut(s)	343, 545, 1084, 1590, 1611, 1851, 1863
MluNI	TGGCCA	1 cut(s)	1838
MlyI	GAGTC	6 cut(s)	202, 484, 728, 974, 1089, 1509
MmeI	TCCRAC	2 cut(s)	12, 1863
Mox20I	TGGCCA	1 cut(s)	1838
Mph1103I	ATGCAT	1 cut(s)	1812
MscI	TGGCCA	1 cut(s)	1838
MseI	TTAA	9 cut(s)	126, 162, 402, 507, 585, 707, 842, 1569, 1794
MslI	CAYNNNNRTG	3 cut(s)	722, 1040, 1205
Msp20I	TGGCCA	1 cut(s)	1838
MspCI	CTTAAG	2 cut(s)	584, 841
MspI	CCGG	3 cut(s)	348, 823, 1599
MspR9I	CCNGG	2 cut(s)	1313, 1600
Mva1269I	GAATGC	1 cut(s)	1922
MvaI	CCWGG	1 cut(s)	1313
NciI	CCSGG	1 cut(s)	1600
NcoI	CCATGG	1 cut(s)	1740
NdeII	GATC	7 cut(s)	147, 358, 666, 1297, 1394, 1492, 1642
NheI	GCTAGC	1 cut(s)	1168
NlaIV	GGNNCC	5 cut(s)	271, 977, 1212, 1451, 1738
NmeAIII	GCCGAG	1 cut(s)	34
NmuCI	GTSAC	2 cut(s)	466, 1270
NsiI	ATGCAT	1 cut(s)	1812
NspI	RCATGY	2 cut(s)	290, 389
PagI	TCATGA	2 cut(s)	105, 669
PaqCI	CACCTGC	1 cut(s)	448
PciI	ACATGT	1 cut(s)	385
PctI	GAATGC	1 cut(s)	1922
PfeI	GAWTC	4 cut(s)	172, 475, 1020, 1684
PflMI	CCANNNNNTGG	1 cut(s)	985
PleI	GAGTC	6 cut(s)	202, 484, 728, 973, 1088, 1509
PpsI	GAGTC	6 cut(s)	202, 484, 728, 973, 1088, 1509
Ppu21I	YACGTR	1 cut(s)	944
PpuMI	RGGWCCY	2 cut(s)	975, 1138
PscI	ACATGT	1 cut(s)	385
Psp124BI	GAGCTC	1 cut(s)	543
Psp5II	RGGWCCY	2 cut(s)	975, 1138
Psp6I	CCWGG	1 cut(s)	1311
PspEI	GGTNACC	1 cut(s)	760
PspFI	CCCAGC	1 cut(s)	1049
PspGI	CCWGG	1 cut(s)	1311
PspN4I	GGNNCC	5 cut(s)	271, 977, 1212, 1451, 1738
PspPI	GGNCC	5 cut(s)	323, 975, 1138, 1210, 1449
PspPPI	RGGWCCY	2 cut(s)	975, 1138
PstNI	CAGNNNCTG	1 cut(s)	184
PsuI	RGATCY	1 cut(s)	1642
RsaI	GTAC	4 cut(s)	716, 790, 942, 1523
RsaNI	GTAC	4 cut(s)	715, 789, 941, 1522
RseI	CAYNNNNRTG	3 cut(s)	722, 1040, 1205
SacI	GAGCTC	1 cut(s)	543
SaqAI	TTAA	9 cut(s)	126, 162, 402, 507, 585, 707, 842, 1569, 1794
Sau3AI	GATC	7 cut(s)	147, 358, 666, 1297, 1394, 1492, 1642
Sau96I	GGNCC	5 cut(s)	323, 975, 1138, 1210, 1449
ScaI	AGTACT	1 cut(s)	1523
SchI	GAGTC	6 cut(s)	202, 484, 728, 974, 1089, 1509
ScrFI	CCNGG	2 cut(s)	1313, 1600
SduI	GDGCHC	2 cut(s)	543, 949
SfaNI	GCATC	1 cut(s)	1476
SfcI	CTRYAG	1 cut(s)	1973
SinI	GGWCC	5 cut(s)	323, 975, 1138, 1210, 1449
SmiMI	CAYNNNNRTG	3 cut(s)	722, 1040, 1205
SmlI	CTYRAG	3 cut(s)	584, 841, 1517
SmoI	CTYRAG	3 cut(s)	584, 841, 1517
SpeI	ACTAGT	1 cut(s)	1385
Sse9I	AATT	7 cut(s)	343, 545, 1084, 1590, 1611, 1851, 1863
SsiI	CCGC	5 cut(s)	18, 290, 1453, 1471, 1474
SspMI	CTAG	6 cut(s)	264, 449, 1169, 1175, 1308, 1386
SstI	GAGCTC	1 cut(s)	543
StyD4I	CCNGG	2 cut(s)	1311, 1598
StyI	CCWWGG	3 cut(s)	334, 1501, 1740
TaaI	ACNGT	4 cut(s)	714, 910, 1626, 1783
TaiI	ACGT	4 cut(s)	499, 946, 1075, 1675
TaqI	TCGA	2 cut(s)	500, 1858
TaqII	GACCGA	1 cut(s)	551
TasI	AATT	7 cut(s)	343, 545, 1084, 1590, 1611, 1851, 1863
TatI	WGTACW	2 cut(s)	788, 1521
TauI	GCSGC	2 cut(s)	293, 1476
TfiI	GAWTC	4 cut(s)	172, 475, 1020, 1684
Tru1I	TTAA	9 cut(s)	126, 162, 402, 507, 585, 707, 842, 1569, 1794
Tru9I	TTAA	9 cut(s)	126, 162, 402, 507, 585, 707, 842, 1569, 1794
TscAI	CASTG	6 cut(s)	490, 1170, 1281, 1469, 1629, 1938
TseFI	GTSAC	2 cut(s)	466, 1270
TseI	GCWGC	9 cut(s)	5, 116, 230, 251, 330, 747, 903, 1178, 1619
Tsp45I	GTSAC	2 cut(s)	466, 1270
TspRI	CASTG	6 cut(s)	490, 1170, 1281, 1469, 1629, 1938
Van91I	CCANNNNNTGG	1 cut(s)	985
Vha464I	CTTAAG	2 cut(s)	584, 841
VpaK11BI	GGWCC	5 cut(s)	323, 975, 1138, 1210, 1449
XapI	RAATTY	4 cut(s)	343, 545, 1590, 1863
XceI	RCATGY	2 cut(s)	290, 389
XcmI	CCANNNNNNNNNTGG	3 cut(s)	244, 1330, 1508
XmiI	GTMKAC	2 cut(s)	434, 1653
XspI	CTAG	6 cut(s)	264, 449, 1169, 1175, 1308, 1386
ZrmI	AGTACT	1 cut(s)	1523
Zsp2I	ATGCAT	1 cut(s)	1812

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.