Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0001425

Physical Location & Seq

Genomic Coordinates Forward (+)

67524756 .. 67528656

Gene Structure 3901 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG367700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1935 bp

ATGAAGTTTGGGAAGGAATTTGCAGCACAAATGGTGCCAGAATGGCAAGAAAAATACATGAACTACAACTACCTAAAATCACTTATAAAAGACATTCAACACTCGAAGCAAAGAAACAAGCCTCCTCCTCCGGCAACCACCACACCGCCCCACCACCTAAAGCGGAGGCTGACATTATACAGAGCCTTCAGTGGTCTCACCAGAAGTCGGCATCACCAAGAGCCCATTAGCCCAAGTCCGGACATCGAAAACCAAGCCATCCTTGTAAACCCTGTGAGATCAGCAGGGTCGAATCACGAGAGTTACCAGACCACTTTCTTAATGGCTGCCGAGGAAGGCGGGGTTATGGAGTTGGAGTATTTCAGAAGGGTTGATGATGAGTTCAACAAAGTTGAGAAGTTTTATAGGGGAAAAGTTGAAGAGGTCATGAAAGAAGCTGCTGTGCTTAACAAGCAAATGGACGCTTTGATCGCTTTTCGGATTAAGGTGGAGAATCCTCAGAGGCTGTTTGATTGGTCTGGCGAGATGACTCGTCTTGCTTCGGATGTTGCAGCTTCCACAGCTCAGTTGGCTGCTTCAACTCCTAGAGGTGCCAAAGCAAGCAGACATGCGGCTATGGCTATGGATGTGATTGAGGAGGGTGGACCAAGCAGCCAAGGGGAAAATTCCGGTGAGGATGATAAAGATGAGAAAGTGAAAGAAGAACATGTTGATAGAAAGGTTAAGGTAGAGAAGCCAAAGAAGTTTAGATGGTCTACACCTGCCCCACTAGATGTTCTAAGTCGTGTGACAATGAATCAAACCACTGAGACTCCACGTTCGACTATTAAAGGTTTCCTCAATGTGCCTCAGCAGACCGAGCTCAAATTCAGCAGGGAAAATCTCAGTAAAGTTGAAGAACAGCTTAAGAGAGCTTTCGTCGTATTTTACCAGAAACTTAGGCTTCTAAAGAGCTTTGTGTTCTTGAATACATTGGCATTTTCAAAGATCATGAAGAAATATGACAAGGTTACTTCAAGAAATACATTAAAACCGTACATGAAGATGGTAGATGACTCCTATCTTGGCAGCTCTGATGAGGTTACCAAGCTTATAGAGAGGGTTGAAAGTACATTCATCAAGCATTTCTCTAACTCAAATCGCCGGAAAGGGATGGCTGTCTTAAGGCCAAAACCAAAGATAGAAAGACATAGGATAACATTTTTCATGGGTTGCTTTGCTGGCTGCACAGTTGCTCTCACATTAGCCCTGATTTTGATTGTACGCGCTCGTGACATTATGAATGAGTCAGGGAGGACCCAGTATATGGAGAACATATTTCCCCTATACAGCTTGTTCGGATTCGTTATTCTACACATGCTTATGTATGCTGGGAACATATACTTCTGGAGACGTTACAGAGTCAATTACTCTTTCATCTTTGGTTTCAAGCAAGGAACTGAGTTGGGATACAGAGAGGTCCTCCTTGTTAGCTTTGGTCTGGCAGTGCTAGCACTAGCTGCTGTTCTCTCAAATCTGGACATGGAAATGGACCCCCAGACCCAAGACTATAAAGCACTAACAGAACTACTCCCTCTCTTCTTGGTTTTGTTTGTAGTTGGGATATTACTATGCCCATTCAACATCGTTTATCGCTCAAGTCGCTATTTCTTCCTTGTTTGTGTGTTCCGTTGTATCTGTGCTCCTCTATATAAGGTCACACTGCCAGATTTCTTCTTGGCTGATCAGTTCACTAGCCAGGTGCAAGCCATTAGAAGCTTGGAGTTCTACATTTGCTACTATGGTTGGGGAGACTATAAACGCAGAGAAAGTAGTTGCAGATCAAGTGAGGTTTTCAACACCTTCAGTTTCATCGTTGCTTGTATTCCATATTGGTCCCGCCTTCTTCAGGTACAACCAACATCCCTGGTAGTACGTTGTTGGTTCATTCCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0008150 GO:0012505 GO:0016020 GO:0031984 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048878 GO:0050801 GO:0055062 GO:0055065 GO:0055069 GO:0055076 GO:0055080 GO:0055081 GO:0055083 GO:0065007 GO:0065008 GO:0071944 GO:0072505 GO:0072506 GO:0072507 GO:0098771 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EXS SPX

Protein Analysis

644

Amino Acids

74.49

Weight (kDa)

9.38

Isoelectric Point (pI)

48.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPX	PF03105	1 - 350	2.4e-85	SPX domain
EXS	PF03124	439 - 631	4.9e-49	EXS family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001425)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14040 AT1G26730 AT1G26730 AT1G35350 AT1G35350 AT2G03240 AT2G03260 AT2G03260
fragaria_vesca	FvH4_4g21230 FvH4_4g30900 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930
malus_domestica	MD00G1081000.v1.1 MD00G1081300.v1.1 MD00G1200800.v1.1 MD16G1068000.v1.1
prunus_persica	Prupe.1G278700_v2.0.a1 Prupe.1G278700_v2.0.a1 Prupe.1G278700_v2.0.a1 Prupe.1G278800_v2.0.a1
pyrus_communis	pycom13g06110 pycom13g06120 pycom16g05960
rosa_chinensis	RchiOBHm_Chr4g0439231
rosa_laevigata	RLG00000006286
rosa_multiflora	Rmu_sc0006598.1_g000012 Rmu_sc0007941.1_g000004 Rmu_ssc0000171.1_g000025
rosa_roxburghii	Rroxscaffold_2G00115520 Rroxscaffold_2G00115990 Rroxscaffold_5G00380220
rosa_rugosa	Rorug04G0317100 Rorug04G0317200
rosa_samantha	Rh4AG367700 Rh4BG379600 Rh4CG393900 Rh4DG373900
rosa_wichuraiana	Rw0G005620 Rw0G011630 Rw5G028550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	86
AarI	CACCTGC	1 cut(s)	769
Acc36I	ACCTGC	1 cut(s)	769
AccB1I	GGYRCC	2 cut(s)	34, 590
AccB7I	CCANNNNNTGG	1 cut(s)	1306
AccI	GTMKAC	1 cut(s)	755
AccII	CGCG	1 cut(s)	1266
AccIII	TCCGGA	1 cut(s)	238
AciI	CCGC	5 cut(s)	146, 163, 339, 611, 1879
AcsI	RAATTY	3 cut(s)	17, 664, 866
AcuI	CTGAAG	3 cut(s)	172, 1828, 1871
AfaI	GTAC	5 cut(s)	1037, 1111, 1263, 1893, 1914
AfiI	CCNNNNNNNGG	4 cut(s)	207, 238, 1306, 1888
AflII	CTTAAG	2 cut(s)	905, 1162
AflIII	ACRYGT	1 cut(s)	706
AjnI	CCWGG	2 cut(s)	1737, 1905
Alw21I	GWGCWC	2 cut(s)	864, 1684
Alw26I	GTCTC	4 cut(s)	200, 803, 1384, 1785
AlwNI	CAGNNNCTG	1 cut(s)	505
Aor13HI	TCCGGA	1 cut(s)	238
AoxI	GGCC	1 cut(s)	1166
ApeKI	GCWGC	9 cut(s)	23, 326, 437, 551, 572, 651, 1068, 1224, 1499
ApoI	RAATTY	3 cut(s)	17, 664, 866
ArsI	GACNNNNNNTTYG	2 cut(s)	802, 834
AspLEI	GCGC	1 cut(s)	1268
AspS9I	GGNCC	5 cut(s)	644, 1296, 1459, 1531, 1875
AsuHPI	GGTGA	3 cut(s)	190, 206, 683
AsuNHI	GCTAGC	1 cut(s)	1489
AvaII	GGWCC	5 cut(s)	644, 1296, 1459, 1531, 1875
BanI	GGYRCC	2 cut(s)	34, 590
BanII	GRGCYC	2 cut(s)	225, 864
BauI	CACGAG	2 cut(s)	296, 1269
Bbv12I	GWGCWC	2 cut(s)	864, 1684
BbvCI	CCTCAGC	1 cut(s)	849
BbvI	GCAGC	9 cut(s)	35, 313, 424, 559, 563, 663, 1080, 1211, 1486
BccI	CCATC	4 cut(s)	266, 744, 1039, 1147
BciT130I	CCWGG	2 cut(s)	1739, 1907
BciVI	GTATCC	1 cut(s)	1442
BclI	TGATCA	1 cut(s)	1723
BcoDI	GTCTC	4 cut(s)	200, 803, 1384, 1785
BfaI	CTAG	5 cut(s)	585, 770, 1490, 1496, 1734
BfrI	CTTAAG	2 cut(s)	905, 1162
BfuAI	ACCTGC	1 cut(s)	769
BfuI	GTATCC	1 cut(s)	1442
BglI	GCCNNNNNGGC	1 cut(s)	43
Bme1390I	CCNGG	2 cut(s)	1739, 1907
Bme18I	GGWCC	5 cut(s)	644, 1296, 1459, 1531, 1875
BmgT120I	GGNCC	5 cut(s)	644, 1296, 1459, 1531, 1875
BmiI	GGNNCC	5 cut(s)	36, 592, 1298, 1533, 1877
BmrFI	CCNGG	2 cut(s)	1739, 1907
BmrI	ACTGGG	1 cut(s)	1294
BmsI	GCATC	1 cut(s)	220
BmtI	GCTAGC	1 cut(s)	1493
BmuI	ACTGGG	1 cut(s)	1294
BplI	GAGNNNNNCTC	2 cut(s)	1446, 1478
BpmI	CTGGAG	1 cut(s)	1408
Bpu10I	CCTNAGC	1 cut(s)	849
BpuEI	CTTGAG	1 cut(s)	1621
BsaI	GGTCTC	1 cut(s)	200
BsaJI	CCNNGG	3 cut(s)	330, 655, 1905
BsaWI	WCCGGW	2 cut(s)	238, 668
BsaXI	ACNNNNNCTCC	4 cut(s)	341, 371, 796, 826
Bsc4I	CCNNNNNNNGG	4 cut(s)	207, 238, 1306, 1888
Bse1I	ACTGG	1 cut(s)	1300
BseAI	TCCGGA	1 cut(s)	238
BseBI	CCWGG	2 cut(s)	1739, 1907
BseDI	CCNNGG	3 cut(s)	330, 655, 1905
BseGI	GGATG	6 cut(s)	258, 550, 631, 682, 1158, 1901
BseLI	CCNNNNNNNGG	4 cut(s)	207, 238, 1306, 1888
BseMII	CTCAG	6 cut(s)	512, 578, 798, 863, 898, 1431
BseNI	ACTGG	1 cut(s)	1300
BseRI	GAGGAG	4 cut(s)	114, 117, 650, 1674
BseXI	GCAGC	9 cut(s)	35, 313, 424, 559, 563, 663, 1080, 1211, 1486
BseYI	CCCAGC	1 cut(s)	1370
BsgI	GTGCAG	1 cut(s)	1210
Bsh1236I	CGCG	1 cut(s)	1266
BshFI	GGCC	1 cut(s)	1168
BshNI	GGYRCC	2 cut(s)	34, 590
BsiHKAI	GWGCWC	2 cut(s)	864, 1684
BsiSI	CCGG	4 cut(s)	131, 239, 669, 1144
BslFI	GGGAC	1 cut(s)	1861
BslI	CCNNNNNNNGG	4 cut(s)	207, 238, 1306, 1888
BsmAI	GTCTC	4 cut(s)	200, 803, 1384, 1785
BsmBI	CGTCTC	1 cut(s)	1384
BsmFI	GGGAC	1 cut(s)	1861
BsnI	GGCC	1 cut(s)	1168
Bso31I	GGTCTC	1 cut(s)	200
Bsp1286I	GDGCHC	3 cut(s)	225, 864, 1684
Bsp13I	TCCGGA	1 cut(s)	238
Bsp143I	GATC	5 cut(s)	278, 468, 987, 1723, 1820
BspACI	CCGC	5 cut(s)	146, 163, 339, 611, 1879
BspANI	GGCC	1 cut(s)	1168
BspCNI	CTCAG	6 cut(s)	511, 577, 799, 862, 897, 1432
BspEI	TCCGGA	1 cut(s)	238
BspFNI	CGCG	1 cut(s)	1266
BspHI	TCATGA	2 cut(s)	426, 990
BspLI	GGNNCC	5 cut(s)	36, 592, 1298, 1533, 1877
BspMI	ACCTGC	1 cut(s)	769
BspOI	GCTAGC	1 cut(s)	1493
BspT107I	GGYRCC	2 cut(s)	34, 590
BspTI	CTTAAG	2 cut(s)	905, 1162
BspTNI	GGTCTC	1 cut(s)	200
BsrI	ACTGG	1 cut(s)	1300
BssECI	CCNNGG	3 cut(s)	330, 655, 1905
BssMI	GATC	5 cut(s)	278, 468, 987, 1723, 1820
BssSI	CACGAG	2 cut(s)	296, 1269
BssT1I	CCWWGG	1 cut(s)	655
Bst2BI	CACGAG	2 cut(s)	296, 1269
Bst2UI	CCWGG	2 cut(s)	1739, 1907
Bst4CI	ACNGT	2 cut(s)	1035, 1231
Bst6I	CTCTTC	2 cut(s)	414, 1583
BstAFI	CTTAAG	2 cut(s)	905, 1162
BstAPI	GCANNNNNTGC	1 cut(s)	1499
BstC8I	GCNNGC	4 cut(s)	601, 1222, 1491, 1746
BstDEI	CTNAG	8 cut(s)	498, 564, 779, 807, 849, 884, 938, 1440
BstEII	GGTNACC	1 cut(s)	1081
BstENI	CCTNNNNNAGG	1 cut(s)	1886
BstF5I	GGATG	6 cut(s)	258, 550, 631, 682, 1158, 1901
BstFNI	CGCG	1 cut(s)	1266
BstHHI	GCGC	1 cut(s)	1268
BstKTI	GATC	5 cut(s)	281, 471, 990, 1726, 1823
BstMAI	GTCTC	4 cut(s)	200, 803, 1384, 1785
BstMBI	GATC	5 cut(s)	278, 468, 987, 1723, 1820
BstNI	CCWGG	2 cut(s)	1739, 1907
BstNSI	RCATGY	3 cut(s)	611, 710, 1360
BstPI	GGTNACC	1 cut(s)	1081
BstSCI	CCNGG	2 cut(s)	1737, 1905
BstUI	CGCG	1 cut(s)	1266
BstV1I	GCAGC	9 cut(s)	35, 313, 424, 559, 563, 663, 1080, 1211, 1486
BsuI	GTATCC	1 cut(s)	1442
BsuRI	GGCC	1 cut(s)	1168
BtsCI	GGATG	6 cut(s)	258, 550, 631, 682, 1158, 1901
BtsI	GCAGTG	2 cut(s)	1491, 1700
BtsIMutI	CAGTG	4 cut(s)	196, 804, 1491, 1700
BveI	ACCTGC	1 cut(s)	769
Cac8I	GCNNGC	4 cut(s)	601, 1222, 1491, 1746
CaiI	CAGNNNCTG	1 cut(s)	505
CciI	TCATGA	2 cut(s)	426, 990
CfoI	GCGC	1 cut(s)	1268
Cfr13I	GGNCC	5 cut(s)	644, 1296, 1459, 1531, 1875
CseI	GACGC	1 cut(s)	470
Csp6I	GTAC	5 cut(s)	1036, 1110, 1262, 1892, 1913
CviAII	CATG	9 cut(s)	58, 427, 608, 707, 991, 1039, 1207, 1357, 1522
CviQI	GTAC	5 cut(s)	1036, 1110, 1262, 1892, 1913
DdeI	CTNAG	8 cut(s)	498, 564, 779, 807, 849, 884, 938, 1440
DpnI	GATC	5 cut(s)	280, 470, 989, 1725, 1822
DpnII	GATC	5 cut(s)	278, 468, 987, 1723, 1820
Eam1104I	CTCTTC	2 cut(s)	414, 1583
EarI	CTCTTC	2 cut(s)	414, 1583
Ecl136II	GAGCTC	1 cut(s)	862
Eco130I	CCWWGG	1 cut(s)	655
Eco24I	GRGCYC	2 cut(s)	225, 864
Eco31I	GGTCTC	1 cut(s)	200
Eco47I	GGWCC	5 cut(s)	644, 1296, 1459, 1531, 1875
Eco53kI	GAGCTC	1 cut(s)	862
Eco57I	CTGAAG	3 cut(s)	172, 1828, 1871
Eco91I	GGTNACC	1 cut(s)	1081
EcoICRI	GAGCTC	1 cut(s)	862
EcoNI	CCTNNNNNAGG	1 cut(s)	1886
EcoO109I	RGGNCCY	2 cut(s)	1296, 1459
EcoO65I	GGTNACC	1 cut(s)	1081
EcoRII	CCWGG	2 cut(s)	1737, 1905
EcoT14I	CCWWGG	1 cut(s)	655
EcoT38I	GRGCYC	2 cut(s)	225, 864
ErhI	CCWWGG	1 cut(s)	655
Esp3I	CGTCTC	1 cut(s)	1384
FaeI	CATG	9 cut(s)	61, 430, 611, 710, 994, 1042, 1210, 1360, 1525
FalI	AAGNNNNNCTT	4 cut(s)	246, 278, 888, 920
FaqI	GGGAC	1 cut(s)	1861
FatI	CATG	9 cut(s)	57, 426, 607, 706, 990, 1038, 1206, 1356, 1521
FauI	CCCGC	2 cut(s)	332, 1886
FbaI	TGATCA	1 cut(s)	1723
FblI	GTMKAC	1 cut(s)	755
FokI	GGATG	6 cut(s)	245, 557, 638, 689, 1165, 1888
FriOI	GRGCYC	2 cut(s)	225, 864
FspBI	CTAG	5 cut(s)	585, 770, 1490, 1496, 1734
GlaI	GCGC	1 cut(s)	1267
GsaI	CCCAGC	1 cut(s)	1374
GsuI	CTGGAG	1 cut(s)	1408
HaeIII	GGCC	1 cut(s)	1168
HapII	CCGG	4 cut(s)	131, 239, 669, 1144
HgaI	GACGC	1 cut(s)	470
HhaI	GCGC	1 cut(s)	1268
Hin1II	CATG	9 cut(s)	61, 430, 611, 710, 994, 1042, 1210, 1360, 1525
Hin6I	GCGC	1 cut(s)	1266
HinP1I	GCGC	1 cut(s)	1266
HindIII	AAGCTT	2 cut(s)	1088, 1756
HinfI	GANTC	9 cut(s)	292, 493, 529, 796, 811, 1055, 1286, 1341, 1401
HpaII	CCGG	4 cut(s)	131, 239, 669, 1144
HphI	GGTGA	3 cut(s)	190, 206, 683
Hpy166II	GTNNAC	4 cut(s)	268, 644, 756, 1731
Hpy188I	TCNGA	6 cut(s)	365, 480, 501, 544, 1075, 1340
Hpy188III	TCNNGA	9 cut(s)	239, 296, 427, 964, 991, 1017, 1271, 1387, 1517
Hpy8I	GTNNAC	4 cut(s)	268, 644, 756, 1731
Hpy99I	CGWCG	1 cut(s)	923
HpyAV	CCTTC	6 cut(s)	7, 196, 329, 360, 1852, 1892
HpyCH4III	ACNGT	2 cut(s)	1035, 1231
HpyCH4IV	ACGT	3 cut(s)	817, 1393, 1915
HpyCH4V	TGCA	5 cut(s)	23, 551, 1227, 1744, 1818
HpyF3I	CTNAG	8 cut(s)	498, 564, 779, 807, 849, 884, 938, 1440
HpySE526I	ACGT	3 cut(s)	817, 1393, 1915
Hsp92II	CATG	9 cut(s)	61, 430, 611, 710, 994, 1042, 1210, 1360, 1525
HspAI	GCGC	1 cut(s)	1266
Kpn2I	TCCGGA	1 cut(s)	238
Ksp22I	TGATCA	1 cut(s)	1723
Kzo9I	GATC	5 cut(s)	278, 468, 987, 1723, 1820
LmnI	GCTCC	1 cut(s)	1687
Lsp1109I	GCAGC	9 cut(s)	35, 313, 424, 559, 563, 663, 1080, 1211, 1486
LweI	GCATC	1 cut(s)	220
MaeI	CTAG	5 cut(s)	585, 770, 1490, 1496, 1734
MaeII	ACGT	3 cut(s)	817, 1393, 1915
MaeIII	GTNAC	7 cut(s)	302, 787, 1009, 1081, 1271, 1394, 1696
MalI	GATC	5 cut(s)	280, 470, 989, 1725, 1822
MboI	GATC	5 cut(s)	278, 468, 987, 1723, 1820
MboII	GAAGA	9 cut(s)	431, 713, 908, 1006, 1054, 1570, 1642, 1705, 1877
MhlI	GDGCHC	3 cut(s)	225, 864, 1684
MluCI	AATT	4 cut(s)	17, 664, 866, 1405
MlyI	GAGTC	5 cut(s)	523, 805, 1049, 1295, 1410
MmeI	TCCRAC	1 cut(s)	333
MroI	TCCGGA	1 cut(s)	238
MseI	TTAA	8 cut(s)	320, 447, 483, 723, 828, 906, 1028, 1163
MslI	CAYNNNNRTG	3 cut(s)	1043, 1361, 1526
MspCI	CTTAAG	2 cut(s)	905, 1162
MspI	CCGG	4 cut(s)	131, 239, 669, 1144
MspR9I	CCNGG	2 cut(s)	1739, 1907
MvaI	CCWGG	2 cut(s)	1739, 1907
MvnI	CGCG	1 cut(s)	1266
NdeII	GATC	5 cut(s)	278, 468, 987, 1723, 1820
NheI	GCTAGC	1 cut(s)	1489
NlaIII	CATG	9 cut(s)	61, 430, 611, 710, 994, 1042, 1210, 1360, 1525
NlaIV	GGNNCC	5 cut(s)	36, 592, 1298, 1533, 1877
NmeAIII	GCCGAG	1 cut(s)	355
NmuCI	GTSAC	3 cut(s)	787, 1271, 1696
NspI	RCATGY	3 cut(s)	611, 710, 1360
PagI	TCATGA	2 cut(s)	426, 990
PaqCI	CACCTGC	1 cut(s)	769
PciI	ACATGT	1 cut(s)	706
PfeI	GAWTC	4 cut(s)	292, 493, 796, 1341
PflMI	CCANNNNNTGG	1 cut(s)	1306
PleI	GAGTC	5 cut(s)	523, 805, 1049, 1294, 1409
PpsI	GAGTC	5 cut(s)	523, 805, 1049, 1294, 1409
PpuMI	RGGWCCY	2 cut(s)	1296, 1459
PscI	ACATGT	1 cut(s)	706
PsiI	TTATAA	1 cut(s)	86
Psp124BI	GAGCTC	1 cut(s)	864
Psp5II	RGGWCCY	2 cut(s)	1296, 1459
Psp6I	CCWGG	2 cut(s)	1737, 1905
PspEI	GGTNACC	1 cut(s)	1081
PspFI	CCCAGC	1 cut(s)	1370
PspGI	CCWGG	2 cut(s)	1737, 1905
PspN4I	GGNNCC	5 cut(s)	36, 592, 1298, 1533, 1877
PspPI	GGNCC	5 cut(s)	644, 1296, 1459, 1531, 1875
PspPPI	RGGWCCY	2 cut(s)	1296, 1459
PsrI	GAACNNNNNNTAC	2 cut(s)	53, 85
PstNI	CAGNNNCTG	1 cut(s)	505
RsaI	GTAC	5 cut(s)	1037, 1111, 1263, 1893, 1914
RsaNI	GTAC	5 cut(s)	1036, 1110, 1262, 1892, 1913
RseI	CAYNNNNRTG	3 cut(s)	1043, 1361, 1526
SacI	GAGCTC	1 cut(s)	864
SaqAI	TTAA	8 cut(s)	320, 447, 483, 723, 828, 906, 1028, 1163
Sau3AI	GATC	5 cut(s)	278, 468, 987, 1723, 1820
Sau96I	GGNCC	5 cut(s)	644, 1296, 1459, 1531, 1875
SchI	GAGTC	5 cut(s)	523, 805, 1049, 1295, 1410
ScrFI	CCNGG	2 cut(s)	1739, 1907
SduI	GDGCHC	3 cut(s)	225, 864, 1684
SfaNI	GCATC	1 cut(s)	220
SinI	GGWCC	5 cut(s)	644, 1296, 1459, 1531, 1875
SmiMI	CAYNNNNRTG	3 cut(s)	1043, 1361, 1526
SmlI	CTYRAG	3 cut(s)	905, 1162, 1636
SmoI	CTYRAG	3 cut(s)	905, 1162, 1636
Sse9I	AATT	4 cut(s)	17, 664, 866, 1405
SsiI	CCGC	5 cut(s)	146, 163, 339, 611, 1879
SspMI	CTAG	5 cut(s)	585, 770, 1490, 1496, 1734
SstI	GAGCTC	1 cut(s)	864
StyD4I	CCNGG	2 cut(s)	1737, 1905
StyI	CCWWGG	1 cut(s)	655
TaaI	ACNGT	2 cut(s)	1035, 1231
TaiI	ACGT	3 cut(s)	820, 1396, 1918
TaqI	TCGA	4 cut(s)	104, 246, 290, 821
TaqII	GACCGA	1 cut(s)	872
TasI	AATT	4 cut(s)	17, 664, 866, 1405
TatI	WGTACW	1 cut(s)	1109
TauI	GCSGC	1 cut(s)	614
TfiI	GAWTC	4 cut(s)	292, 493, 796, 1341
Tru1I	TTAA	8 cut(s)	320, 447, 483, 723, 828, 906, 1028, 1163
Tru9I	TTAA	8 cut(s)	320, 447, 483, 723, 828, 906, 1028, 1163
TscAI	CASTG	4 cut(s)	196, 811, 1491, 1707
TseFI	GTSAC	3 cut(s)	787, 1271, 1696
TseI	GCWGC	9 cut(s)	23, 326, 437, 551, 572, 651, 1068, 1224, 1499
Tsp45I	GTSAC	3 cut(s)	787, 1271, 1696
TspGWI	ACGGA	2 cut(s)	1658, 1920
TspRI	CASTG	4 cut(s)	196, 811, 1491, 1707
Van91I	CCANNNNNTGG	1 cut(s)	1306
Vha464I	CTTAAG	2 cut(s)	905, 1162
VpaK11BI	GGWCC	5 cut(s)	644, 1296, 1459, 1531, 1875
XagI	CCTNNNNNAGG	1 cut(s)	1886
XapI	RAATTY	3 cut(s)	17, 664, 866
XceI	RCATGY	3 cut(s)	611, 710, 1360
XcmI	CCANNNNNNNNNTGG	3 cut(s)	319, 565, 1756
XmiI	GTMKAC	1 cut(s)	755
XspI	CTAG	5 cut(s)	585, 770, 1490, 1496, 1734

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.