Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0001425

Physical Location & Seq

Genomic Coordinates Reverse (-)

28286370 .. 28294859

Gene Structure 8490 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G278800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2418 bp

ATGAAGTTTGGGAAGGAGTTTGTAACACAAATGGTGCCAGAATGGCAACAAGCATACATGGATTATGATTATCTAAAATCCCTCCTAAAAGAAATTCAACGCTTCAATCAAAGATACAAGCCTCCACCAGTAGCTACCACAGCCCGCAGTCGAAGGCTTACATTGTACAGAGTCTTCAGTGGTCTCATGTCGCAAAGCCCGCACAGCCAGCAACCCAACAGCACATCCTCCACATCCCCTCTAGACATTGAAAGCCAAGCCATTCTTGTGAACTCTGTAAGACGCGATGGCTCCAAGAGCTACCAGACCACGTTTCTAATGGCTGCAGAGGAAGGGGGTCTGCAGGAGTTGGATTATTTTAGAAAGGTTGATGATGAGTTCAATAAAGTGGATAAGTTTTATAGGTCTAAGGTGGATGAGGTGATGAAGGAAGCTGCTGTGCTCAACAAGCAAATGGATGCTTTCATCGCGTTTCGCATCAAAGTGGAGAATCCGCAGAGGCCGTTCGATTGGTCAGGGGAGATGACTCGTCTTGCTTCCGATGTTGCTGCTTCAACAGCTGCATTGGCAGCTTCCACTCCCCGCGGAGTCAGAGCAAGCAGGCGCGCAGCCATGGCTACGGATGTGATCGAGGAGAGTGGATCAAATAGCCAGGAGGAACATTCTGGTGATGAAGAAAAAGATGGAAAAAAGACTGAGAATGCTACGACTCAAGAAAAGAAGGCAGAGAGCTTAAGAGGCGCTAGACCTTCGCCACTGGACATACTAAATCATGTGACAATGAATCACACAGTTACTCCAGTTTCGACCATTAAAGGCTTCCTCAATGTGCCTCCACAGACAGAGCTCAAGTTCAGCAGAGAAAATCTGAAGAAAGTTGAAGAGCAGCTTAAGGGCGCTTTTATTGAATTTTACCGGAAACTTCGGCTTCTAAAGAGCTATAGCTTCTTGAATACGTTGGCTTTTTCAAAAATCATGAAAAAATATGATAAGATTACTTCAAGAGATACATCAAAACCTTACATGAATATGGTGGATAACTCCTACCTTGGTAGCTCTGACGGGATCACCAAGCTTATGGAGAGGGTTGAAACTACATTCATAAAGTATTTCTCAAACTCAAATCGCAGAAAAGGAATGGTCGTGTTAAGGCCAAAATCAAAGATAGAAAGACATAGGATAACATTTTCCATGGGTTGCTTTGCCGGATGCACAGCTGCTCTCACATTAGCCCTTATTTTGATGGTACGTGCTCGCAGTATTAACAATGCCAACAATCCTGAATTTGACAAGGGAAAACTCCAGTACATGGACACCATGTTTCCCCTATACAGCTTGTTTGGATTCATTTTTCTACACATGCTTATGTATGCCGGCAACATATACTTTTGGAGGCGGTTCAGAGTCAATTACTCTTTCATATTTGGTTTCAAGCAAGGAACTGAGTTGGGCTACAGAGAGGTTCTTCTTCTCAGTTTTGGTCTGGCAGTGCTAGCACTTGCTTCTGTGCTCTCAAATCTTGACATGGAGATGGACCCCAAAACCAAAGATTACAAAGCACTTACCGAACTTCTCCCTCTCTTCTTGGTTTTGCTTGTAGTTTTGATATTATTATGCCCCTTCAACCTCATATATCGCTCAAGTCGCTACTTCTTCCTCGTTTGTCTGTTTCACTGTATCTGTGCTCCTCTGTATAAGGTCACACTCCCGGATTTCTTCTTGGCAGATCAGTTAACTAGCCAGGTGCAAGCCATTAGAAGTCTGCAATTCTACGTTTGCTATTATGGTTGGGGAGACTACAAACTCAGACAAAACACTTGCAAATCACACGATGTCTTCAACACTTTCACTTTCATCGTTGCTTGTATTCCGTATTGGTCTCGTCTCCTTCAGTGCCTCCGCCGTTTGGTTGAAGAGAAAGATCCCATGCAAGGTTACAATGGGCTGAAATATTTCTTCACAATAGTAGCCGTTAGCATGAGGACAGCATATAATCTAGAGAGTCTTAAAAATGAAGTGAACTGGAAAATTCTTGCTGGGGTTTTCTCAATTGTTGCAGCAATCTATGGAACATATTGGGATCTTGTTGTGGATTGGGGACTTCTGCAACGCAATTCCATGAACCGCTGGTTAAGAGACAAACTCTTGATCCCTTACAAAAGTGTATATTTCGGTGCCATGGTGTTGAATGTGTTGCTGAGATTTGCCTGGTTGCAAACTGTTTTGGGTTTCGATGTTTCTTTCATGCATGGACAAACAATGGTTGCGGTTGTGGCCAGCTTGGAAATAATCCGTCGTGGGATATGGAGTTTTTTCAGGTTGGAGAATGAGCATCTGAACAATGTTGGCAAGTACAGGGCGTTCAAGTCAGTGCCATTGCCCTTCAACTATGATGAAGACCAAGGCAAACATGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0008150 GO:0012505 GO:0016020 GO:0031984 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048878 GO:0050801 GO:0055062 GO:0055065 GO:0055069 GO:0055076 GO:0055080 GO:0055081 GO:0055083 GO:0065007 GO:0065008 GO:0071944 GO:0072505 GO:0072506 GO:0072507 GO:0098771 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EXS SPX

Protein Analysis

806

Amino Acids

92.93

Weight (kDa)

9.36

Isoelectric Point (pI)

42.47

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001425)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14040 AT1G26730 AT1G26730 AT1G35350 AT1G35350 AT2G03240 AT2G03260 AT2G03260
fragaria_vesca	FvH4_4g21230 FvH4_4g30900 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930 FvH4_4g30930
malus_domestica	MD00G1081000.v1.1 MD00G1081300.v1.1 MD00G1200800.v1.1 MD16G1068000.v1.1
prunus_persica	Prupe.1G278700_v2.0.a1 Prupe.1G278700_v2.0.a1 Prupe.1G278700_v2.0.a1 Prupe.1G278800_v2.0.a1
pyrus_communis	pycom13g06110 pycom13g06120 pycom16g05960
rosa_chinensis	RchiOBHm_Chr4g0439231
rosa_laevigata	RLG00000006286
rosa_multiflora	Rmu_sc0006598.1_g000012 Rmu_sc0007941.1_g000004 Rmu_ssc0000171.1_g000025
rosa_roxburghii	Rroxscaffold_2G00115520 Rroxscaffold_2G00115990 Rroxscaffold_5G00380220
rosa_rugosa	Rorug04G0317100 Rorug04G0317200
rosa_samantha	Rh4AG367700 Rh4BG379600 Rh4CG393900 Rh4DG373900
rosa_wichuraiana	Rw0G005620 Rw0G011630 Rw5G028550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	34, 2174
AccB7I	CCANNNNNTGG	1 cut(s)	1309
AccII	CGCG	4 cut(s)	285, 470, 585, 606
AciI	CCGC	9 cut(s)	145, 200, 494, 583, 585, 1396, 1900, 2125, 2267
AclWI	GGATC	5 cut(s)	649, 1073, 1916, 2088, 2143
AcoI	YGGCCR	1 cut(s)	2274
AcsI	RAATTY	4 cut(s)	93, 908, 1283, 2028
AcuI	CTGAAG	3 cut(s)	160, 890, 1874
AfaI	GTAC	4 cut(s)	167, 1248, 1307, 2354
AfiI	CCNNNNNNNGG	3 cut(s)	1309, 1906, 1931
AflII	CTTAAG	2 cut(s)	733, 890
AjnI	CCWGG	3 cut(s)	651, 1740, 2207
Alw21I	GWGCWC	5 cut(s)	444, 849, 1255, 1512, 1687
Alw26I	GTCTC	5 cut(s)	188, 1788, 1884, 1889, 2130
AlwI	GGATC	5 cut(s)	649, 1073, 1916, 2088, 2143
AoxI	GGCC	3 cut(s)	500, 1151, 2274
ApeKI	GCWGC	9 cut(s)	323, 434, 548, 560, 569, 608, 886, 1217, 2057
ApoI	RAATTY	4 cut(s)	93, 908, 1283, 2028
Asp700I	GAANNNNTTC	1 cut(s)	1952
AspLEI	GCGC	4 cut(s)	606, 608, 743, 899
AspS9I	GGNCC	1 cut(s)	1534
AsuC2I	CCSGG	1 cut(s)	1709
AsuHPI	GGTGA	3 cut(s)	433, 680, 1060
AsuNHI	GCTAGC	1 cut(s)	1492
AvaII	GGWCC	1 cut(s)	1534
BalI	TGGCCA	1 cut(s)	2276
BanI	GGYRCC	2 cut(s)	34, 2174
BanII	GRGCYC	1 cut(s)	849
BarI	GAAGNNNNNNTAC	2 cut(s)	158, 190
BbsI	GAAGAC	3 cut(s)	166, 1828, 2403
Bbv12I	GWGCWC	5 cut(s)	444, 849, 1255, 1512, 1687
BbvI	GCAGC	9 cut(s)	310, 421, 535, 547, 581, 620, 898, 1204, 2069
BccI	CCATC	4 cut(s)	281, 677, 1237, 1525
BceAI	ACGGC	3 cut(s)	487, 1887, 1955
BcgI	CGANNNNNNTGC	2 cut(s)	530, 564
BciT130I	CCWGG	3 cut(s)	653, 1742, 2209
BcnI	CCSGG	1 cut(s)	1709
BcoDI	GTCTC	5 cut(s)	188, 1788, 1884, 1889, 2130
BfaI	CTAG	5 cut(s)	242, 744, 1493, 1737, 1997
BfmI	CTRYAG	4 cut(s)	324, 341, 940, 1453
BfoI	RGCGCY	2 cut(s)	744, 900
BfrI	CTTAAG	2 cut(s)	733, 890
BglI	GCCNNNNNGGC	1 cut(s)	43
BisI	GCNGC	9 cut(s)	324, 435, 549, 561, 570, 609, 887, 1218, 2058
BlsI	GCNGC	9 cut(s)	325, 436, 550, 562, 571, 610, 888, 1219, 2059
Bme1390I	CCNGG	4 cut(s)	653, 1709, 1742, 2209
Bme18I	GGWCC	1 cut(s)	1534
BmgT120I	GGNCC	1 cut(s)	1534
BmiI	GGNNCC	4 cut(s)	36, 292, 1536, 2176
BmrFI	CCNGG	4 cut(s)	653, 1709, 1742, 2209
BmsI	GCATC	4 cut(s)	448, 486, 1199, 2341
BmtI	GCTAGC	1 cut(s)	1496
BpiI	GAAGAC	3 cut(s)	166, 1828, 2403
BplI	GAGNNNNNCTC	2 cut(s)	2127, 2159
BpmI	CTGGAG	2 cut(s)	783, 1286
BpuEI	CTTGAG	3 cut(s)	696, 833, 1624
BpuMI	CCSGG	1 cut(s)	1709
BsaAI	YACGTR	1 cut(s)	1250
BsaI	GGTCTC	2 cut(s)	188, 1884
BsaJI	CCNNGG	6 cut(s)	583, 612, 1048, 1191, 2178, 2401
BsaWI	WCCGGW	1 cut(s)	915
BsaXI	ACNNNNNCTCC	2 cut(s)	781, 811
Bsc4I	CCNNNNNNNGG	3 cut(s)	1309, 1906, 1931
Bse118I	RCCGGY	1 cut(s)	1373
Bse1I	ACTGG	5 cut(s)	128, 762, 800, 1303, 2027
Bse3DI	GCAATG	1 cut(s)	2375
BseBI	CCWGG	3 cut(s)	653, 1742, 2209
BseDI	CCNNGG	6 cut(s)	583, 612, 1048, 1191, 2178, 2401
BseGI	GGATG	6 cut(s)	224, 233, 421, 463, 628, 1214
BseLI	CCNNNNNNNGG	3 cut(s)	1309, 1906, 1931
BseMI	GCAATG	1 cut(s)	2375
BseMII	CTCAG	5 cut(s)	687, 1434, 1486, 1819, 2189
BseNI	ACTGG	5 cut(s)	128, 762, 800, 1303, 2027
BsePI	GCGCGC	1 cut(s)	604
BseRI	GAGGAG	2 cut(s)	647, 1677
BseXI	GCAGC	9 cut(s)	310, 421, 535, 547, 581, 620, 898, 1204, 2069
BseYI	CCCAGC	1 cut(s)	2036
Bsh1236I	CGCG	4 cut(s)	285, 470, 585, 606
BshFI	GGCC	3 cut(s)	502, 1153, 2276
BshNI	GGYRCC	2 cut(s)	34, 2174
BsiHKAI	GWGCWC	5 cut(s)	444, 849, 1255, 1512, 1687
BsiSI	CCGG	4 cut(s)	916, 1206, 1374, 1709
BslFI	GGGAC	1 cut(s)	2112
BslI	CCNNNNNNNGG	3 cut(s)	1309, 1906, 1931
BsmAI	GTCTC	5 cut(s)	188, 1788, 1884, 1889, 2130
BsmBI	CGTCTC	1 cut(s)	1889
BsmFI	GGGAC	1 cut(s)	2112
BsmI	GAATGC	1 cut(s)	706
BsnI	GGCC	3 cut(s)	502, 1153, 2276
Bso31I	GGTCTC	2 cut(s)	188, 1884
Bsp1286I	GDGCHC	5 cut(s)	444, 849, 1255, 1512, 1687
Bsp1407I	TGTACA	1 cut(s)	165
Bsp143I	GATC	7 cut(s)	627, 641, 1065, 1726, 1921, 2080, 2148
Bsp19I	CCATGG	3 cut(s)	612, 1191, 2178
BspACI	CCGC	9 cut(s)	145, 200, 494, 583, 585, 1396, 1900, 2125, 2267
BspANI	GGCC	3 cut(s)	502, 1153, 2276
BspCNI	CTCAG	5 cut(s)	688, 1435, 1485, 1818, 2190
BspFNI	CGCG	4 cut(s)	285, 470, 585, 606
BspHI	TCATGA	1 cut(s)	975
BspLI	GGNNCC	4 cut(s)	36, 292, 1536, 2176
BspMAI	CTGCAG	2 cut(s)	328, 345
BspOI	GCTAGC	1 cut(s)	1496
BspPI	GGATC	5 cut(s)	649, 1073, 1916, 2088, 2143
BspQI	GCTCTTC	1 cut(s)	876
BspT107I	GGYRCC	2 cut(s)	34, 2174
BspTI	CTTAAG	2 cut(s)	733, 890
BspTNI	GGTCTC	2 cut(s)	188, 1884
BsrDI	GCAATG	1 cut(s)	2375
BsrFI	RCCGGY	1 cut(s)	1373
BsrGI	TGTACA	1 cut(s)	165
BsrI	ACTGG	5 cut(s)	128, 762, 800, 1303, 2027
BssAI	RCCGGY	1 cut(s)	1373
BssECI	CCNNGG	6 cut(s)	583, 612, 1048, 1191, 2178, 2401
BssHII	GCGCGC	1 cut(s)	604
BssMI	GATC	7 cut(s)	627, 641, 1065, 1726, 1921, 2080, 2148
BssT1I	CCWWGG	5 cut(s)	612, 1048, 1191, 2178, 2401
Bst2UI	CCWGG	3 cut(s)	653, 1742, 2209
Bst4CI	ACNGT	3 cut(s)	793, 1676, 2221
Bst6I	CTCTTC	3 cut(s)	876, 1586, 1908
BstAFI	CTTAAG	2 cut(s)	733, 890
BstAUI	TGTACA	1 cut(s)	165
BstBAI	YACGTR	1 cut(s)	1250
BstDEI	CTNAG	6 cut(s)	408, 696, 1443, 1472, 1805, 2198
BstDSI	CCRYGG	4 cut(s)	583, 612, 1191, 2178
BstF5I	GGATG	6 cut(s)	224, 233, 421, 463, 628, 1214
BstFNI	CGCG	4 cut(s)	285, 470, 585, 606
BstH2I	RGCGCY	2 cut(s)	744, 900
BstHHI	GCGC	4 cut(s)	606, 608, 743, 899
BstKTI	GATC	7 cut(s)	630, 644, 1068, 1729, 1924, 2083, 2151
BstMAI	GTCTC	5 cut(s)	188, 1788, 1884, 1889, 2130
BstMBI	GATC	7 cut(s)	627, 641, 1065, 1726, 1921, 2080, 2148
BstNI	CCWGG	3 cut(s)	653, 1742, 2209
BstNSI	RCATGY	1 cut(s)	1363
BstSCI	CCNGG	4 cut(s)	651, 1707, 1740, 2207
BstSFI	CTRYAG	4 cut(s)	324, 341, 940, 1453
BstUI	CGCG	4 cut(s)	285, 470, 585, 606
BstV1I	GCAGC	9 cut(s)	310, 421, 535, 547, 581, 620, 898, 1204, 2069
BstV2I	GAAGAC	3 cut(s)	166, 1828, 2403
BstX2I	RGATCY	2 cut(s)	1921, 2080
BstXI	CCANNNNNNTGG	1 cut(s)	1078
BstYI	RGATCY	2 cut(s)	1921, 2080
BsuRI	GGCC	3 cut(s)	502, 1153, 2276
BtgI	CCRYGG	4 cut(s)	583, 612, 1191, 2178
BtgZI	GCGATG	2 cut(s)	300, 451
BtsCI	GGATG	6 cut(s)	224, 233, 421, 463, 628, 1214
BtsI	GCAGTG	1 cut(s)	1494
BtsIMutI	CAGTG	6 cut(s)	184, 755, 1494, 1672, 1898, 2376
CciI	TCATGA	1 cut(s)	975
CfoI	GCGC	4 cut(s)	606, 608, 743, 899
Cfr10I	RCCGGY	1 cut(s)	1373
Cfr13I	GGNCC	1 cut(s)	1534
Cfr42I	CCGCGG	1 cut(s)	586
CseI	GACGC	1 cut(s)	291
Csp6I	GTAC	4 cut(s)	166, 1247, 1306, 2353
CviQI	GTAC	4 cut(s)	166, 1247, 1306, 2353
DdeI	CTNAG	6 cut(s)	408, 696, 1443, 1472, 1805, 2198
DpnI	GATC	7 cut(s)	629, 643, 1067, 1728, 1923, 2082, 2150
DpnII	GATC	7 cut(s)	627, 641, 1065, 1726, 1921, 2080, 2148
EaeI	YGGCCR	1 cut(s)	2274
Eam1104I	CTCTTC	3 cut(s)	876, 1586, 1908
EarI	CTCTTC	3 cut(s)	876, 1586, 1908
EciI	GGCGGA	1 cut(s)	1889
Ecl136II	GAGCTC	1 cut(s)	847
Eco130I	CCWWGG	5 cut(s)	612, 1048, 1191, 2178, 2401
Eco24I	GRGCYC	1 cut(s)	849
Eco31I	GGTCTC	2 cut(s)	188, 1884
Eco47I	GGWCC	1 cut(s)	1534
Eco53kI	GAGCTC	1 cut(s)	847
Eco57I	CTGAAG	3 cut(s)	160, 890, 1874
EcoICRI	GAGCTC	1 cut(s)	847
EcoRII	CCWGG	3 cut(s)	651, 1740, 2207
EcoT14I	CCWWGG	5 cut(s)	612, 1048, 1191, 2178, 2401
EcoT22I	ATGCAT	1 cut(s)	2250
EcoT38I	GRGCYC	1 cut(s)	849
ErhI	CCWWGG	5 cut(s)	612, 1048, 1191, 2178, 2401
Esp3I	CGTCTC	1 cut(s)	1889
FalI	AAGNNNNNCTT	4 cut(s)	249, 281, 873, 905
FaqI	GGGAC	1 cut(s)	2112
FauI	CCCGC	3 cut(s)	152, 207, 590
Fnu4HI	GCNGC	9 cut(s)	324, 435, 549, 561, 570, 609, 887, 1218, 2058
FokI	GGATG	6 cut(s)	211, 220, 428, 470, 635, 1221
FriOI	GRGCYC	1 cut(s)	849
Fsp4HI	GCNGC	9 cut(s)	324, 435, 549, 561, 570, 609, 887, 1218, 2058
FspBI	CTAG	5 cut(s)	242, 744, 1493, 1737, 1997
GlaI	GCGC	4 cut(s)	605, 607, 742, 898
GluI	GCNGC	9 cut(s)	324, 435, 549, 561, 570, 609, 887, 1218, 2058
GsaI	CCCAGC	1 cut(s)	2040
GsuI	CTGGAG	2 cut(s)	783, 1286
HaeII	RGCGCY	2 cut(s)	744, 900
HaeIII	GGCC	3 cut(s)	502, 1153, 2276
HapII	CCGG	4 cut(s)	916, 1206, 1374, 1709
HgaI	GACGC	1 cut(s)	291
HhaI	GCGC	4 cut(s)	606, 608, 743, 899
Hin6I	GCGC	4 cut(s)	604, 606, 741, 897
HinP1I	GCGC	4 cut(s)	604, 606, 741, 897
HincII	GTYRAC	1 cut(s)	1734
HindII	GTYRAC	1 cut(s)	1734
HindIII	AAGCTT	1 cut(s)	1073
HinfI	GANTC	9 cut(s)	171, 490, 526, 588, 709, 784, 1344, 1404, 2002
HpaI	GTTAAC	1 cut(s)	1734
HpaII	CCGG	4 cut(s)	916, 1206, 1374, 1709
HphI	GGTGA	3 cut(s)	433, 680, 1060
Hpy166II	GTNNAC	3 cut(s)	271, 1734, 2020
Hpy188I	TCNGA	7 cut(s)	541, 593, 870, 1060, 1403, 1808, 2337
Hpy188III	TCNNGA	9 cut(s)	242, 713, 949, 976, 1002, 1280, 1520, 1997, 2146
Hpy8I	GTNNAC	3 cut(s)	271, 1734, 2020
Hpy99I	CGWCG	1 cut(s)	2298
HpyAV	CCTTC	9 cut(s)	7, 147, 326, 421, 715, 759, 1630, 1898, 2392
HpyCH4III	ACNGT	3 cut(s)	793, 1676, 2221
HpyCH4IV	ACGT	4 cut(s)	311, 956, 1249, 1773
HpyF3I	CTNAG	6 cut(s)	408, 696, 1443, 1472, 1805, 2198
HpySE526I	ACGT	4 cut(s)	311, 956, 1249, 1773
HspAI	GCGC	4 cut(s)	604, 606, 741, 897
KroI	GCCGGC	1 cut(s)	1373
KroNI	GCCGGC	1 cut(s)	1375
KspAI	GTTAAC	1 cut(s)	1734
KspI	CCGCGG	1 cut(s)	586
Kzo9I	GATC	7 cut(s)	627, 641, 1065, 1726, 1921, 2080, 2148
LguI	GCTCTTC	1 cut(s)	876
LmnI	GCTCC	2 cut(s)	296, 1690
Lsp1109I	GCAGC	9 cut(s)	310, 421, 535, 547, 581, 620, 898, 1204, 2069
LweI	GCATC	4 cut(s)	448, 486, 1199, 2341
MaeI	CTAG	5 cut(s)	242, 744, 1493, 1737, 1997
MaeII	ACGT	4 cut(s)	311, 956, 1249, 1773
MaeIII	GTNAC	5 cut(s)	22, 775, 793, 1699, 1934
MalI	GATC	7 cut(s)	629, 643, 1067, 1728, 1923, 2082, 2150
MboI	GATC	7 cut(s)	627, 641, 1065, 1726, 1921, 2080, 2148
MfeI	CAATTG	1 cut(s)	2049
MflI	RGATCY	2 cut(s)	1921, 2080
MhlI	GDGCHC	5 cut(s)	444, 849, 1255, 1512, 1687
MlsI	TGGCCA	1 cut(s)	2276
MluCI	AATT	8 cut(s)	93, 908, 1283, 1408, 1766, 2028, 2049, 2113
MluNI	TGGCCA	1 cut(s)	2276
MlyI	GAGTC	6 cut(s)	180, 520, 597, 703, 1413, 2011
MmeI	TCCRAC	2 cut(s)	330, 2301
Mox20I	TGGCCA	1 cut(s)	2276
Mph1103I	ATGCAT	1 cut(s)	2250
MroNI	GCCGGC	1 cut(s)	1373
MroXI	GAANNNNTTC	1 cut(s)	1952
MscI	TGGCCA	1 cut(s)	2276
MseI	TTAA	8 cut(s)	734, 813, 891, 1148, 1263, 1733, 2007, 2132
MslI	CAYNNNNRTG	6 cut(s)	266, 482, 666, 1028, 1364, 1529
Msp20I	TGGCCA	1 cut(s)	2276
MspA1I	CMGCKG	4 cut(s)	560, 585, 1217, 2127
MspCI	CTTAAG	2 cut(s)	733, 890
MspI	CCGG	4 cut(s)	916, 1206, 1374, 1709
MspR9I	CCNGG	4 cut(s)	653, 1709, 1742, 2209
MunI	CAATTG	1 cut(s)	2049
Mva1269I	GAATGC	1 cut(s)	706
MvaI	CCWGG	3 cut(s)	653, 1742, 2209
MvnI	CGCG	4 cut(s)	285, 470, 585, 606
NaeI	GCCGGC	1 cut(s)	1375
NciI	CCSGG	1 cut(s)	1709
NcoI	CCATGG	3 cut(s)	612, 1191, 2178
NdeII	GATC	7 cut(s)	627, 641, 1065, 1726, 1921, 2080, 2148
NgoMIV	GCCGGC	1 cut(s)	1373
NheI	GCTAGC	1 cut(s)	1492
NlaIV	GGNNCC	4 cut(s)	36, 292, 1536, 2176
NmuCI	GTSAC	2 cut(s)	775, 1699
NsiI	ATGCAT	1 cut(s)	2250
NspI	RCATGY	1 cut(s)	1363
PagI	TCATGA	1 cut(s)	975
PauI	GCGCGC	1 cut(s)	604
PciSI	GCTCTTC	1 cut(s)	876
PctI	GAATGC	1 cut(s)	706
PdiI	GCCGGC	1 cut(s)	1375
PdmI	GAANNNNTTC	1 cut(s)	1952
PfeI	GAWTC	3 cut(s)	490, 784, 1344
PflMI	CCANNNNNTGG	1 cut(s)	1309
PfoI	TCCNGGA	1 cut(s)	1707
PkrI	GCNGC	9 cut(s)	325, 436, 550, 562, 571, 610, 888, 1219, 2059
PleI	GAGTC	6 cut(s)	179, 520, 596, 703, 1412, 2010
PpsI	GAGTC	6 cut(s)	179, 520, 596, 703, 1412, 2010
Ppu21I	YACGTR	1 cut(s)	1250
Psp124BI	GAGCTC	1 cut(s)	849
Psp6I	CCWGG	3 cut(s)	651, 1740, 2207
PspFI	CCCAGC	1 cut(s)	2036
PspGI	CCWGG	3 cut(s)	651, 1740, 2207
PspN4I	GGNNCC	4 cut(s)	36, 292, 1536, 2176
PspPI	GGNCC	1 cut(s)	1534
PsrI	GAACNNNNNNTAC	2 cut(s)	2345, 2377
PstI	CTGCAG	2 cut(s)	328, 345
PsuI	RGATCY	2 cut(s)	1921, 2080
PteI	GCGCGC	1 cut(s)	604
PvuII	CAGCTG	2 cut(s)	560, 1217
RsaI	GTAC	4 cut(s)	167, 1248, 1307, 2354
RsaNI	GTAC	4 cut(s)	166, 1247, 1306, 2353
RseI	CAYNNNNRTG	6 cut(s)	266, 482, 666, 1028, 1364, 1529
SacI	GAGCTC	1 cut(s)	849
SacII	CCGCGG	1 cut(s)	586
SapI	GCTCTTC	1 cut(s)	876
SaqAI	TTAA	8 cut(s)	734, 813, 891, 1148, 1263, 1733, 2007, 2132
SatI	GCNGC	9 cut(s)	324, 435, 549, 561, 570, 609, 887, 1218, 2058
Sau3AI	GATC	7 cut(s)	627, 641, 1065, 1726, 1921, 2080, 2148
Sau96I	GGNCC	1 cut(s)	1534
SchI	GAGTC	6 cut(s)	180, 520, 597, 703, 1413, 2011
ScrFI	CCNGG	4 cut(s)	653, 1709, 1742, 2209
SduI	GDGCHC	5 cut(s)	444, 849, 1255, 1512, 1687
SfaNI	GCATC	4 cut(s)	448, 486, 1199, 2341
SfcI	CTRYAG	4 cut(s)	324, 341, 940, 1453
Sfr303I	CCGCGG	1 cut(s)	586
SgrBI	CCGCGG	1 cut(s)	586
SinI	GGWCC	1 cut(s)	1534
SmiMI	CAYNNNNRTG	6 cut(s)	266, 482, 666, 1028, 1364, 1529
SmlI	CTYRAG	5 cut(s)	711, 733, 848, 890, 1639
SmoI	CTYRAG	5 cut(s)	711, 733, 848, 890, 1639
Sse9I	AATT	8 cut(s)	93, 908, 1283, 1408, 1766, 2028, 2049, 2113
SsiI	CCGC	9 cut(s)	145, 200, 494, 583, 585, 1396, 1900, 2125, 2267
SspI	AATATT	1 cut(s)	1952
SspMI	CTAG	5 cut(s)	242, 744, 1493, 1737, 1997
SstI	GAGCTC	1 cut(s)	849
StyD4I	CCNGG	4 cut(s)	651, 1707, 1740, 2207
StyI	CCWWGG	5 cut(s)	612, 1048, 1191, 2178, 2401
TaaI	ACNGT	3 cut(s)	793, 1676, 2221
TaiI	ACGT	4 cut(s)	314, 959, 1252, 1776
TaqI	TCGA	5 cut(s)	151, 507, 630, 806, 2232
TasI	AATT	8 cut(s)	93, 908, 1283, 1408, 1766, 2028, 2049, 2113
TatI	WGTACW	3 cut(s)	165, 1305, 2352
TfiI	GAWTC	3 cut(s)	490, 784, 1344
Tru1I	TTAA	8 cut(s)	734, 813, 891, 1148, 1263, 1733, 2007, 2132
Tru9I	TTAA	8 cut(s)	734, 813, 891, 1148, 1263, 1733, 2007, 2132
TscAI	CASTG	6 cut(s)	184, 762, 1494, 1679, 1898, 2376
TseFI	GTSAC	2 cut(s)	775, 1699
TseI	GCWGC	9 cut(s)	323, 434, 548, 560, 569, 608, 886, 1217, 2057
Tsp45I	GTSAC	2 cut(s)	775, 1699
TspGWI	ACGGA	3 cut(s)	635, 1860, 2282
TspRI	CASTG	6 cut(s)	184, 762, 1494, 1679, 1898, 2376
Van91I	CCANNNNNTGG	1 cut(s)	1309
Vha464I	CTTAAG	2 cut(s)	733, 890
VpaK11BI	GGWCC	1 cut(s)	1534
XapI	RAATTY	4 cut(s)	93, 908, 1283, 2028
XbaI	TCTAGA	2 cut(s)	241, 1996
XceI	RCATGY	1 cut(s)	1363
XcmI	CCANNNNNNNNNTGG	1 cut(s)	316
XmnI	GAANNNNTTC	1 cut(s)	1952
XspI	CTAG	5 cut(s)	242, 744, 1493, 1737, 1997
Zsp2I	ATGCAT	1 cut(s)	2250

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.