Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0009585

Physical Location & Seq

Genomic Coordinates Reverse (-)

26531345 .. 26538444

Gene Structure 7100 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g24310.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2784 bp

ATGGAGTCCGATTCAGACTCAGACGGCTCTCATATCTCGGCAACTCCGCCACGACCAAAGCCGCCTCCAAAGCCCACCCTAATCTCCTCCCAGTCATCCAGACCTAAGTCGTCCTCTAAGTCCAACTCAAAAGCCAAAAAGCTCTTCTCCGATCCACCCGTACCCGCCAGACCCGACCCGGCACCCGACCCGTTTCCGCCTCTCCCCTCCGATTTACCTTTCCAGATACTCCGACACCCGCCCGCGAACCCCGCCGTCGATTCTTCCTCCAAATCGGCGCCGTGGTTCTCGAAGAATCGACGAGTCAGCATCGATTTCGATCCGGCCGCGTACGACCCGCCGTCTTCTTTCTCAGCGCCGGAGAACTCAAAGCCTCAGCCGGAGGCTGGTATCGCTCAGTCTGGTTCCGCTTGGGTCCCGCCGCTGCAACCGGAGCCCAAAGTTGAAGCTAGGTCAGGGTTTCCAGCCAAAATTGTGAGGAACGTGAATCTGATTCGAGGTAATGCTCCTCTGCCGCCGGTGAAGCTCAAAGGCGGAGCCGAAGGCAACTTCGTGAAGCTCAACCTGAACGGAAGGAAGCGGAAGTTTCTGAACAAGGGCAGAAGAGGTAGTTCCAGTTCTTCTTCAGGTCGCCGGAAGTTTTACCGGAAAGGTAAAAGAAAATTGACGGCGCAAGACGGAAATGAAGACGAAGCTAATGGCGATGAAGTCACGGATGCAATTTCGGAGCAGCAGACTCGGAGCCAGGACAGTAAAAAGGCCAAGAAATTCGACCTGGAAGCGTTTGAGGAGGTGGTTGCGGCGGCGAGGGAGGAGAGTTCTGATGAGAATTTGATGAAGTTGTTGAAGGTTACTTATGGCTATGATTCGTTCCGGGATGGGCAGTTGGAGGCAATCAAGAATGTGCTTGCCGGAGAGTCCATGATGGTGGTTTTGCCGACAGGTGCTGGCAAGTCGTTGTGTTATCAGTTGCCTGCTGTCATTTTACCTGGGGTGACTTTGGTGGTTAGTCCATTGATTGCTTTGATGATTGATCAGCTTAAACAGCTTCCTTATATGATTCGCGGCGGTCTTCTTTGTAGTAGTCAGACAATGGAAGAAGTTTCCGGGACGATTAGGATGGTTCAAGAAGGGGGGATAAAAGTGCTTTTCGTATCCCCAGAGAGATTCTTGAATGCAGAATTCCTGTCTATATTTTCTGCCACCCCGATATCTCTTGTTGTGGTGGATGAAGCTCACTGTGTATCTGAATGGTCGCACAATTTCCGGCCATCATATATGAGGCTCAGAGCTTCTATGCTTCGTTCCAAGCTCAATGTGAACTGCATTCTTGCTATGACAGCTACCGCCACAGCTACAACTTTGAGTTCTGTCATGTCAGCTTTAGAGATTCCTCTGACCAATCTCATTCAAAAAGCCAACCTAAGGGATAATTTACAACTATCAGTTACATCAAGTGGAAATAGAATGAAAGATCTGCTGAAGTTGATCAAGTCTACTTCCTTCAAGGATGTTCAGAGTATCATTATCTACTGCAAGTTTCAGTTTGAAACAGAAATGATAAGCAGATACTTATGTGACAACAATATCAATGCAAAGAGTTACCATAGTGGCATCCCTTCAAAAGATCGTACTCGTGTGCAGGAGTTATTCTTTAATAACAAAATTCGAGTGGTTGTTGCAACTGTGGCCTTCGGCATGGGCCTTGACAAGAGGGACATTGGCTCTGTGATTCATTACACCATACCAGAAAGCTTGGAGGAATATGTTCAGGAGATCGGAAGAGCTGGACGGGATGGAAGGACTTCCAATTGCCATCTCTATTTTGACGACACCACATTTTTCAAACTTCGAAGTCTTATGTATAGTGATGGTGTGGATGAATATGTGGTAAACAAATTCCTCTGCCAGATATTCACCAGTAATGAGAACTTTCAGGGAAAAACTTGCTCATTGGTTAAAGAAACTGCATCTCGCAAGTTTGATATGAAAGAAGAGGTGATGCTCACAATTCTAACGCAGTTGGAGTTGGGTGAAGTGCAGTATTTGCATTTACTTCCAGAGATCAATGTAACTTGCATTTTGAACTTTCATAAGACTTCTCCAGTTTTGCTTGCTGGAAAGGATGTTCTTATTGCAGCAATTCTGAAGAAGTCTGAGATTAAGCAAGGACAATATGTATTTGACATACCGACTATAGCAAATAGCATTGGAGTTACAACGACCATCCTATCCAACCATTTACAGAATTTAAAGGTGAAAGGAGAAGTAACATACGAAGTGAAGGACCAGGCCTTCTGTTATACAATCAAGGAGGTCCCTGTAGATCTTTGTTCTCTATCAGCACAGCTTACAAATTGGCTATCAGATATTGAAAGTTGTAAGGTCCGGAAGTTGGATGCGATGTATAATGCAGCAGTCTCTGCTGTTGATGCATGTGAGAAGATGGAAGGTTGTTCTGATGGCCAGCAAACACTATGTTTGCAAAGGAAGATTTTGGAGTATTTCAATGGAGAAGATGATTTTAATGTCCCTAATAATATGGGTAAAAGCAGCCCCTTTTTGCAAGCAGATATAAAAGTGTTCCTAAAGAGCAATTCACAGGCCAAATACACCCCCAGAGCTGTTGCAAGGATAATGCATGGCATTCCAAGTCCAGCATATACTTCTGCATTTTGGTCTAAAACTCACTTCTGGGGAAGATATACACATATAGACTTCCAGGCGGTAATGGAAGCAGCAAAGGCGGAATTGATCAATTTTGTGAGAAAGGATGCAGTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000724 GO:0000725 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006281 GO:0006284 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007154 GO:0008026 GO:0008094 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009378 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009987 GO:0009991 GO:0010035 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031668 GO:0032392 GO:0032508 GO:0033554 GO:0034641 GO:0034645 GO:0042221 GO:0042623 GO:0042631 GO:0043138 GO:0043140 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0070035 GO:0070887 GO:0071103 GO:0071214 GO:0071229 GO:0071462 GO:0071496 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0104004 GO:0140097 GO:1901360 GO:1901363 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

928

Amino Acids

102.76

Weight (kDa)

8.86

Isoelectric Point (pI)

46.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ResIII	PF04851	291 - 450	5.3e-06	Type III restriction enzyme, res subunit
DEAD	PF00270	293 - 454	3.4e-23	DEAD/DEAH box helicase
Helicase_C	PF00271	490 - 600	1.8e-19	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009585)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27880 AT1G27880
fragaria_vesca	FvH4_4g24310 FvH4_4g24310
malus_domestica	MD16G1111900.v1.1
prunus_persica	Prupe.1G233100_v2.0.a1
pyrus_communis	pycom13g09790 pycom16g09490
rosa_chinensis	RchiOBHm_Chr4g0431111
rosa_laevigata	RLG00000006924
rosa_multiflora	Rmu_co7983982.1_g000001 Rmu_co8245775.1_g000001 Rmu_sc0040015.1_g000001
rosa_roxburghii	Rroxscaffold_5G00372700
rosa_rugosa	Rorug04G0248100 Rorug04G0248200 Rorug04G0248300
rosa_samantha	Rh4AG304700 Rh4BG311900 Rh4CG328200 Rh4DG308500
rosa_wichuraiana	Rw4G026480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	181, 277
AccI	GTMKAC	1 cut(s)	1496
AccII	CGCG	3 cut(s)	245, 329, 1065
AccIII	TCCGGA	1 cut(s)	2388
AclWI	GGATC	2 cut(s)	146, 314
AcoI	YGGCCR	3 cut(s)	324, 1268, 2464
AcsI	RAATTY	6 cut(s)	767, 829, 1181, 1665, 1898, 2248
AcuI	CTGAAG	3 cut(s)	609, 1502, 2168
AcyI	GRCGYC	1 cut(s)	278
AfaI	GTAC	3 cut(s)	162, 332, 1633
AfiI	CCNNNNNNNGG	3 cut(s)	386, 1425, 2395
AhdI	GACNNNNNGTC	1 cut(s)	340
AjnI	CCWGG	5 cut(s)	744, 774, 988, 2289, 2721
AjuI	GAANNNNNNNTTGG	2 cut(s)	128, 160
AloI	GAACNNNNNNTCC	2 cut(s)	2112, 2144
Alw26I	GTCTC	1 cut(s)	2425
AlwI	GGATC	2 cut(s)	146, 314
AlwNI	CAGNNNCTG	2 cut(s)	947, 2423
Aor13HI	TCCGGA	1 cut(s)	2388
AoxI	GGCC	8 cut(s)	324, 759, 1268, 1689, 1702, 2292, 2464, 2604
ApeKI	GCWGC	6 cut(s)	424, 730, 2138, 2414, 2553, 2738
ApoI	RAATTY	6 cut(s)	767, 829, 1181, 1665, 1898, 2248
Asp700I	GAANNNNTTC	2 cut(s)	1767, 1804
AspLEI	GCGC	3 cut(s)	280, 358, 673
AspS9I	GGNCC	5 cut(s)	415, 1702, 2287, 2317, 2386
AsuC2I	CCSGG	3 cut(s)	179, 875, 1108
AsuHPI	GGTGA	6 cut(s)	532, 1006, 1909, 2011, 2045, 2269
AsuII	TTCGAA	1 cut(s)	1852
AvaII	GGWCC	4 cut(s)	415, 2287, 2317, 2386
AxyI	CCTNAGG	1 cut(s)	1424
BaeI	ACNNNNGTAYC	2 cut(s)	1561, 1594
BalI	TGGCCA	1 cut(s)	2466
BanI	GGYRCC	2 cut(s)	181, 277
BanII	GRGCYC	1 cut(s)	438
BauI	CACGAG	1 cut(s)	1635
BbsI	GAAGAC	3 cut(s)	336, 693, 1064
BbvCI	CCTCAGC	1 cut(s)	375
BbvI	GCAGC	6 cut(s)	411, 742, 2150, 2426, 2565, 2750
BceAI	ACGGC	5 cut(s)	40, 239, 265, 325, 684
BcgI	CGANNNNNNTGC	4 cut(s)	298, 332, 719, 753
BciT130I	CCWGG	5 cut(s)	746, 776, 990, 2291, 2723
BciVI	GTATCC	1 cut(s)	1165
BclI	TGATCA	3 cut(s)	1033, 1488, 2754
BcnI	CCSGG	3 cut(s)	179, 875, 1108
BcoDI	GTCTC	1 cut(s)	2425
BfaI	CTAG	2 cut(s)	450, 2782
BfmI	CTRYAG	2 cut(s)	2196, 2322
BfoI	RGCGCY	2 cut(s)	281, 359
BfuI	GTATCC	1 cut(s)	1165
BglII	AGATCT	2 cut(s)	1474, 2326
Bme1390I	CCNGG	8 cut(s)	179, 746, 776, 875, 990, 1108, 2291, 2723
Bme18I	GGWCC	4 cut(s)	415, 2287, 2317, 2386
BmeRI	GACNNNNNGTC	1 cut(s)	340
BmgT120I	GGNCC	5 cut(s)	415, 1702, 2287, 2317, 2386
BmiI	GGNNCC	9 cut(s)	183, 279, 406, 416, 417, 435, 538, 743, 2319
BmrFI	CCNGG	8 cut(s)	179, 746, 776, 875, 990, 1108, 2291, 2723
BmrI	ACTGGG	1 cut(s)	85
BmsI	GCATC	8 cut(s)	318, 706, 1623, 1979, 1992, 2389, 2422, 2764
BmuI	ACTGGG	1 cut(s)	85
BoxI	GACNNNNGTC	1 cut(s)	106
BpiI	GAAGAC	3 cut(s)	336, 693, 1064
BpmI	CTGGAG	1 cut(s)	2088
Bpu10I	CCTNAGC	1 cut(s)	375
Bpu14I	TTCGAA	1 cut(s)	1852
BpuMI	CCSGG	3 cut(s)	179, 875, 1108
Bsa29I	ATCGAT	1 cut(s)	312
BsaBI	GATNNNNATC	1 cut(s)	318
BsaHI	GRCGYC	1 cut(s)	278
BsaJI	CCNNGG	2 cut(s)	281, 989
BsaWI	WCCGGW	3 cut(s)	430, 645, 2388
Bsc4I	CCNNNNNNNGG	3 cut(s)	386, 1425, 2395
Bse118I	RCCGGY	1 cut(s)	517
Bse1I	ACTGG	4 cut(s)	91, 615, 1920, 2105
Bse21I	CCTNAGG	1 cut(s)	1424
Bse8I	GATNNNNATC	1 cut(s)	318
BseAI	TCCGGA	1 cut(s)	2388
BseBI	CCWGG	5 cut(s)	746, 776, 990, 2291, 2723
BseCI	ATCGAT	1 cut(s)	312
BseDI	CCNNGG	2 cut(s)	281, 989
BseJI	GATNNNNATC	1 cut(s)	318
BseLI	CCNNNNNNNGG	3 cut(s)	386, 1425, 2395
BseMII	CTCAG	6 cut(s)	33, 366, 389, 410, 1300, 2148
BseNI	ACTGG	4 cut(s)	91, 615, 1920, 2105
BseRI	GAGGAG	4 cut(s)	76, 498, 803, 827
BseX3I	CGGCCG	1 cut(s)	324
BseXI	GCAGC	6 cut(s)	411, 742, 2150, 2426, 2565, 2750
BsgI	GTGCAG	2 cut(s)	1661, 2060
Bsh1236I	CGCG	3 cut(s)	245, 329, 1065
Bsh1285I	CGRYCG	1 cut(s)	327
BshFI	GGCC	8 cut(s)	326, 761, 1270, 1691, 1704, 2294, 2466, 2606
BshNI	GGYRCC	2 cut(s)	181, 277
BshVI	ATCGAT	1 cut(s)	312
BsiEI	CGRYCG	1 cut(s)	327
BsiWI	CGTACG	1 cut(s)	330
BslFI	GGGAC	5 cut(s)	401, 1123, 1730, 2303, 2516
BslI	CCNNNNNNNGG	3 cut(s)	386, 1425, 2395
BsmAI	GTCTC	1 cut(s)	2425
BsmFI	GGGAC	5 cut(s)	401, 1123, 1730, 2303, 2516
BsmI	GAATGC	3 cut(s)	1180, 1326, 2646
BsnI	GGCC	8 cut(s)	326, 761, 1270, 1691, 1704, 2294, 2466, 2606
Bsp119I	TTCGAA	1 cut(s)	1852
Bsp1286I	GDGCHC	1 cut(s)	438
Bsp13I	TCCGGA	1 cut(s)	2388
BspANI	GGCC	8 cut(s)	326, 761, 1270, 1691, 1704, 2294, 2466, 2606
BspCNI	CTCAG	6 cut(s)	32, 365, 388, 409, 1299, 2149
BspDI	ATCGAT	1 cut(s)	312
BspEI	TCCGGA	1 cut(s)	2388
BspFNI	CGCG	3 cut(s)	245, 329, 1065
BspLI	GGNNCC	9 cut(s)	183, 279, 406, 416, 417, 435, 538, 743, 2319
BspPI	GGATC	2 cut(s)	146, 314
BspQI	GCTCTTC	2 cut(s)	149, 1777
BspT104I	TTCGAA	1 cut(s)	1852
BspT107I	GGYRCC	2 cut(s)	181, 277
BsrFI	RCCGGY	1 cut(s)	517
BsrI	ACTGG	4 cut(s)	91, 615, 1920, 2105
BssAI	RCCGGY	1 cut(s)	517
BssECI	CCNNGG	2 cut(s)	281, 989
BssNI	GRCGYC	1 cut(s)	278
BssSI	CACGAG	1 cut(s)	1635
Bst2BI	CACGAG	1 cut(s)	1635
Bst2UI	CCWGG	5 cut(s)	746, 776, 990, 2291, 2723
Bst4CI	ACNGT	3 cut(s)	752, 1241, 1687
Bst6I	CTCTTC	4 cut(s)	149, 598, 1777, 1989
BstACI	GRCGYC	1 cut(s)	278
BstAPI	GCANNNNNTGC	2 cut(s)	2047, 2423
BstBI	TTCGAA	1 cut(s)	1852
BstC8I	GCNNGC	7 cut(s)	243, 909, 949, 975, 2115, 2468, 2568
BstDEI	CTNAG	9 cut(s)	19, 105, 117, 352, 375, 396, 1286, 1424, 2157
BstDSI	CCRYGG	1 cut(s)	281
BstFNI	CGCG	3 cut(s)	245, 329, 1065
BstH2I	RGCGCY	2 cut(s)	281, 359
BstHHI	GCGC	3 cut(s)	280, 358, 673
BstMAI	GTCTC	1 cut(s)	2425
BstMCI	CGRYCG	1 cut(s)	327
BstNI	CCWGG	5 cut(s)	746, 776, 990, 2291, 2723
BstNSI	RCATGY	1 cut(s)	2439
BstPAI	GACNNNNGTC	1 cut(s)	106
BstSCI	CCNGG	8 cut(s)	177, 744, 774, 873, 988, 1106, 2289, 2721
BstSFI	CTRYAG	2 cut(s)	2196, 2322
BstUI	CGCG	3 cut(s)	245, 329, 1065
BstV1I	GCAGC	6 cut(s)	411, 742, 2150, 2426, 2565, 2750
BstV2I	GAAGAC	3 cut(s)	336, 693, 1064
BstX2I	RGATCY	2 cut(s)	1474, 2326
BstXI	CCANNNNNNTGG	1 cut(s)	928
BstYI	RGATCY	2 cut(s)	1474, 2326
BstZI	CGGCCG	1 cut(s)	324
Bsu15I	ATCGAT	1 cut(s)	312
Bsu36I	CCTNAGG	1 cut(s)	1424
BsuI	GTATCC	1 cut(s)	1165
BsuRI	GGCC	8 cut(s)	326, 761, 1270, 1691, 1704, 2294, 2466, 2606
BsuTUI	ATCGAT	1 cut(s)	312
BtgI	CCRYGG	1 cut(s)	281
BtgZI	GCGATG	2 cut(s)	717, 2417
BtsIMutI	CAGTG	1 cut(s)	1237
Cac8I	GCNNGC	7 cut(s)	243, 909, 949, 975, 2115, 2468, 2568
CaiI	CAGNNNCTG	2 cut(s)	947, 2423
CfoI	GCGC	3 cut(s)	280, 358, 673
Cfr10I	RCCGGY	1 cut(s)	517
Cfr13I	GGNCC	5 cut(s)	415, 1702, 2287, 2317, 2386
ClaI	ATCGAT	1 cut(s)	312
Csp6I	GTAC	3 cut(s)	161, 331, 1632
CviAII	CATG	5 cut(s)	922, 1375, 1699, 2436, 2642
CviQI	GTAC	3 cut(s)	161, 331, 1632
DdeI	CTNAG	9 cut(s)	19, 105, 117, 352, 375, 396, 1286, 1424, 2157
DinI	GGCGCC	1 cut(s)	279
DraI	TTTAAA	1 cut(s)	2253
DriI	GACNNNNNGTC	1 cut(s)	340
EaeI	YGGCCR	3 cut(s)	324, 1268, 2464
EagI	CGGCCG	1 cut(s)	324
Eam1104I	CTCTTC	4 cut(s)	149, 598, 1777, 1989
Eam1105I	GACNNNNNGTC	1 cut(s)	340
EarI	CTCTTC	4 cut(s)	149, 598, 1777, 1989
EciI	GGCGGA	4 cut(s)	36, 186, 549, 2762
EclXI	CGGCCG	1 cut(s)	324
Eco147I	AGGCCT	1 cut(s)	2294
Eco24I	GRGCYC	1 cut(s)	438
Eco32I	GATATC	1 cut(s)	1212
Eco47I	GGWCC	4 cut(s)	415, 2287, 2317, 2386
Eco52I	CGGCCG	1 cut(s)	324
Eco57I	CTGAAG	3 cut(s)	609, 1502, 2168
Eco81I	CCTNAGG	1 cut(s)	1424
EcoO109I	RGGNCCY	2 cut(s)	415, 2317
EcoRI	GAATTC	1 cut(s)	1181
EcoRII	CCWGG	5 cut(s)	744, 774, 988, 2289, 2721
EcoRV	GATATC	1 cut(s)	1212
EcoT22I	ATGCAT	2 cut(s)	2437, 2643
EcoT38I	GRGCYC	1 cut(s)	438
EgeI	GGCGCC	1 cut(s)	279
EheI	GGCGCC	1 cut(s)	279
FaeI	CATG	5 cut(s)	925, 1378, 1702, 2439, 2645
FaqI	GGGAC	5 cut(s)	401, 1123, 1730, 2303, 2516
FatI	CATG	5 cut(s)	921, 1374, 1698, 2435, 2641
FauI	CCCGC	6 cut(s)	172, 246, 250, 259, 345, 426
FbaI	TGATCA	3 cut(s)	1033, 1488, 2754
FblI	GTMKAC	1 cut(s)	1496
FriOI	GRGCYC	1 cut(s)	438
FspBI	CTAG	2 cut(s)	450, 2782
GlaI	GCGC	3 cut(s)	279, 357, 672
GsuI	CTGGAG	1 cut(s)	2088
HaeII	RGCGCY	2 cut(s)	281, 359
HaeIII	GGCC	8 cut(s)	326, 761, 1270, 1691, 1704, 2294, 2466, 2606
HhaI	GCGC	3 cut(s)	280, 358, 673
Hin1I	GRCGYC	1 cut(s)	278
Hin1II	CATG	5 cut(s)	925, 1378, 1702, 2439, 2645
Hin6I	GCGC	3 cut(s)	278, 356, 671
HinP1I	GCGC	3 cut(s)	278, 356, 671
HindIII	AAGCTT	1 cut(s)	1753
HphI	GGTGA	6 cut(s)	532, 1006, 1909, 2011, 2045, 2269
Hpy166II	GTNNAC	3 cut(s)	1321, 1497, 1894
Hpy8I	GTNNAC	3 cut(s)	1321, 1497, 1894
Hpy99I	CGWCG	2 cut(s)	260, 303
HpyCH4III	ACNGT	3 cut(s)	752, 1241, 1687
HpyCH4IV	ACGT	1 cut(s)	483
HpyF3I	CTNAG	9 cut(s)	19, 105, 117, 352, 375, 396, 1286, 1424, 2157
HpySE526I	ACGT	1 cut(s)	483
Hsp92I	GRCGYC	1 cut(s)	278
Hsp92II	CATG	5 cut(s)	925, 1378, 1702, 2439, 2645
HspAI	GCGC	3 cut(s)	278, 356, 671
KasI	GGCGCC	1 cut(s)	277
KflI	GGGWCCC	1 cut(s)	415
Kpn2I	TCCGGA	1 cut(s)	2388
Ksp22I	TGATCA	3 cut(s)	1033, 1488, 2754
LguI	GCTCTTC	2 cut(s)	149, 1777
LmnI	GCTCC	5 cut(s)	433, 511, 536, 727, 741
Lsp1109I	GCAGC	6 cut(s)	411, 742, 2150, 2426, 2565, 2750
LweI	GCATC	8 cut(s)	318, 706, 1623, 1979, 1992, 2389, 2422, 2764
MaeI	CTAG	2 cut(s)	450, 2782
MaeII	ACGT	1 cut(s)	483
MaeIII	GTNAC	9 cut(s)	709, 850, 994, 1447, 1577, 1601, 2071, 2215, 2269
MfeI	CAATTG	1 cut(s)	1810
MflI	RGATCY	2 cut(s)	1474, 2326
MhlI	GDGCHC	1 cut(s)	438
MlsI	TGGCCA	1 cut(s)	2466
MluNI	TGGCCA	1 cut(s)	2466
Mly113I	GGCGCC	1 cut(s)	278
MlyI	GAGTC	5 cut(s)	11, 14, 312, 730, 926
MmeI	TCCRAC	6 cut(s)	147, 256, 867, 2004, 2259, 2376
Mox20I	TGGCCA	1 cut(s)	2466
Mph1103I	ATGCAT	2 cut(s)	2437, 2643
MroI	TCCGGA	1 cut(s)	2388
MroXI	GAANNNNTTC	2 cut(s)	1767, 1804
MscI	TGGCCA	1 cut(s)	2466
MseI	TTAA	6 cut(s)	1041, 1656, 1959, 2163, 2252, 2526
MslI	CAYNNNNRTG	1 cut(s)	926
Msp20I	TGGCCA	1 cut(s)	2466
MspA1I	CMGCKG	1 cut(s)	424
MspR9I	CCNGG	8 cut(s)	179, 746, 776, 875, 990, 1108, 2291, 2723
MunI	CAATTG	1 cut(s)	1810
Mva1269I	GAATGC	3 cut(s)	1180, 1326, 2646
MvaI	CCWGG	5 cut(s)	746, 776, 990, 2291, 2723
MvnI	CGCG	3 cut(s)	245, 329, 1065
NarI	GGCGCC	1 cut(s)	278
NciI	CCSGG	3 cut(s)	179, 875, 1108
NlaIII	CATG	5 cut(s)	925, 1378, 1702, 2439, 2645
NlaIV	GGNNCC	9 cut(s)	183, 279, 406, 416, 417, 435, 538, 743, 2319
NmeAIII	GCCGAG	1 cut(s)	17
NmuCI	GTSAC	3 cut(s)	709, 994, 1577
NsiI	ATGCAT	2 cut(s)	2437, 2643
NspI	RCATGY	1 cut(s)	2439
NspV	TTCGAA	1 cut(s)	1852
PceI	AGGCCT	1 cut(s)	2294
PciSI	GCTCTTC	2 cut(s)	149, 1777
PctI	GAATGC	3 cut(s)	1180, 1326, 2646
PdmI	GAANNNNTTC	2 cut(s)	1767, 1804
Pfl23II	CGTACG	1 cut(s)	330
PfoI	TCCNGGA	2 cut(s)	873, 1106
PleI	GAGTC	5 cut(s)	11, 13, 311, 730, 925
PluTI	GGCGCC	1 cut(s)	281
PpsI	GAGTC	5 cut(s)	11, 13, 311, 730, 925
PpuMI	RGGWCCY	2 cut(s)	415, 2317
PshAI	GACNNNNGTC	1 cut(s)	106
Psp5II	RGGWCCY	2 cut(s)	415, 2317
Psp6I	CCWGG	5 cut(s)	744, 774, 988, 2289, 2721
PspGI	CCWGG	5 cut(s)	744, 774, 988, 2289, 2721
PspLI	CGTACG	1 cut(s)	330
PspN4I	GGNNCC	9 cut(s)	183, 279, 406, 416, 417, 435, 538, 743, 2319
PspPI	GGNCC	5 cut(s)	415, 1702, 2287, 2317, 2386
PspPPI	RGGWCCY	2 cut(s)	415, 2317
PsrI	GAACNNNNNNTAC	2 cut(s)	601, 633
PstNI	CAGNNNCTG	2 cut(s)	947, 2423
PsuI	RGATCY	2 cut(s)	1474, 2326
RsaI	GTAC	3 cut(s)	162, 332, 1633
RsaNI	GTAC	3 cut(s)	161, 331, 1632
RseI	CAYNNNNRTG	1 cut(s)	926
SapI	GCTCTTC	2 cut(s)	149, 1777
SaqAI	TTAA	6 cut(s)	1041, 1656, 1959, 2163, 2252, 2526
Sau96I	GGNCC	5 cut(s)	415, 1702, 2287, 2317, 2386
SchI	GAGTC	5 cut(s)	11, 14, 312, 730, 926
ScrFI	CCNGG	8 cut(s)	179, 746, 776, 875, 990, 1108, 2291, 2723
SduI	GDGCHC	1 cut(s)	438
SfaNI	GCATC	8 cut(s)	318, 706, 1623, 1979, 1992, 2389, 2422, 2764
SfcI	CTRYAG	2 cut(s)	2196, 2322
SfoI	GGCGCC	1 cut(s)	279
SfuI	TTCGAA	1 cut(s)	1852
SgrAI	CRCCGGYG	1 cut(s)	517
SinI	GGWCC	4 cut(s)	415, 2287, 2317, 2386
SmiMI	CAYNNNNRTG	1 cut(s)	926
SseBI	AGGCCT	1 cut(s)	2294
SspDI	GGCGCC	1 cut(s)	277
SspMI	CTAG	2 cut(s)	450, 2782
StuI	AGGCCT	1 cut(s)	2294
StyD4I	CCNGG	8 cut(s)	177, 744, 774, 873, 988, 1106, 2289, 2721
TaaI	ACNGT	3 cut(s)	752, 1241, 1687
TaiI	ACGT	1 cut(s)	486
TaqI	TCGA	9 cut(s)	258, 290, 298, 312, 318, 496, 771, 1669, 1852
TauI	GCSGC	7 cut(s)	64, 329, 424, 517, 803, 806, 1068
Tru1I	TTAA	6 cut(s)	1041, 1656, 1959, 2163, 2252, 2526
Tru9I	TTAA	6 cut(s)	1041, 1656, 1959, 2163, 2252, 2526
TscAI	CASTG	1 cut(s)	1244
TseFI	GTSAC	3 cut(s)	709, 994, 1577
TseI	GCWGC	6 cut(s)	424, 730, 2138, 2414, 2553, 2738
Tsp45I	GTSAC	3 cut(s)	709, 994, 1577
TspDTI	ATGAA	9 cut(s)	699, 720, 851, 1245, 1484, 1724, 1896, 2003, 2081
TspGWI	ACGGA	3 cut(s)	585, 693, 728
TspRI	CASTG	1 cut(s)	1244
VpaK11BI	GGWCC	4 cut(s)	415, 2287, 2317, 2386
XapI	RAATTY	6 cut(s)	767, 829, 1181, 1665, 1898, 2248
XceI	RCATGY	1 cut(s)	2439
XmiI	GTMKAC	1 cut(s)	1496
XmnI	GAANNNNTTC	2 cut(s)	1767, 1804
XspI	CTAG	2 cut(s)	450, 2782
Zsp2I	ATGCAT	2 cut(s)	2437, 2643

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.