Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0009585

Physical Location & Seq

Genomic Coordinates Reverse (-)

41909773 .. 41911149

Gene Structure 1377 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0248200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1377 bp

ATGCAGCAAGAGTTTGCAATGGAGGAGAGCAGAGGCAATCAACTTCCTGGAGAGAGGTTCTGCCCCATGGAGGACGAACTAGTTCTCTTCTACCTTAAGCCCCTCTTGAGCGGAGAGAAGGTGCCCGGCAGAAACAGCGTGGTGTTCGACTGCGACCTCTACGGTCGCCAAGAACCTTGGGAGATATGGGAGGCCTACAAGACCAGAAGACCAAACGACTTGAGGCTCAACAAGGACAGCTACTTCTTCACCCAACACAAGAAGATGAGTTCCACAGACTCATGCATACGCCGGACCGTTGGAAATGGCACCTGGAAGGGTGACGACTCCGGCAAGCCAGTAAAATCTTTGGAGACTGGTCGTGTGGTTGGCTTGAAGAAAAGACTTACTTACAAGAACGAAGCATCGGTGCACAACGACTGTTGGATCTTGCATGAGTTCTACCTTGATCCATCACTCAGAGACAAGAAACAAAAGGTGAAAGACTATGTTCTTTGTCTGCTACAAAAAAATGGCGAACTCAAAACCAAGATCGAAAAGAAGAGAAAGCAACGTGAAGAGGAAGAGGTTCTTGAAAACAATTATGCCTGTGATGATGGAGAGAACATAAACAAGGAGCAAGAAGAGTTTCTTGAGCCACAAGCGAAGCGACAACGAAACGTTCCATCCATTGATAATGCACTAGTACCAATGCCATCAGAAGAGGATTCATTCGCAGCTGAGTTAGAAGAGACATTGCCATGCTTTGAAGATGATAATGCACTAGTACCAATGCCATCAGCAGAGGATGCATTCGCAGCTGAGTTAGAAGAGACATTGCCATGCTTTGAAGATGATAATGCACCCTCAGAAGCTGAAGCAATTGGCTTTCAAGGTGAGGAGAATTGGGGACTCCAACAGTTAACTTCCGAGGTGCAATCAGGCCCTTCATTTGGAGAGGATCATGGAATATTTATTCCACTACCAGAGGAAGATTTTCTCTTGGAGGAAATGGTAGAACAAATGGGTATGGTAGAAATGGAAGACCAGCTAGTTGTTAATGGTGCGACTAGTAATATGGAAGTGGCGGAAGAAAACGTGCTAAACAACACCCTTCTTCACACTCCCGCATCATCCTTGTCTGCGGCCTATGATGGCACTGATATGCCATATTTATCCATGGAAAATGGTTGCACTGATTCAGCTGGAAGCAACAATGTTTGTGGAGGATCGATTGGCTTTCAGGATGGTGCGTACTGGCCTGAGTCTTTAGTGGAGGTCCTTACTGAAGAGCAACAAAAGACAGCTGATAAAGATTGTTCAGATTGGTTGGAGTCGATCAGTTTTAGTCCTGAGGAAAAGAACTTCCTTTGGAGTGAAGTGCAATGGTGTTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000724 GO:0000725 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006281 GO:0006284 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007154 GO:0008026 GO:0008094 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009378 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009987 GO:0009991 GO:0010035 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031668 GO:0032392 GO:0032508 GO:0033554 GO:0034641 GO:0034645 GO:0042221 GO:0042623 GO:0042631 GO:0043138 GO:0043140 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0070035 GO:0070887 GO:0071103 GO:0071214 GO:0071229 GO:0071462 GO:0071496 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0104004 GO:0140097 GO:1901360 GO:1901363 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

458

Amino Acids

51.99

Weight (kDa)

4.36

Isoelectric Point (pI)

63.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAM	PF02365	16 - 148	1.5e-22	No apical meristem (NAM) protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009585)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27880 AT1G27880
fragaria_vesca	FvH4_4g24310 FvH4_4g24310
malus_domestica	MD16G1111900.v1.1
prunus_persica	Prupe.1G233100_v2.0.a1
pyrus_communis	pycom13g09790 pycom16g09490
rosa_chinensis	RchiOBHm_Chr4g0431111
rosa_laevigata	RLG00000006924
rosa_multiflora	Rmu_co7983982.1_g000001 Rmu_co8245775.1_g000001 Rmu_sc0040015.1_g000001
rosa_roxburghii	Rroxscaffold_5G00372700
rosa_rugosa	Rorug04G0248100 Rorug04G0248200 Rorug04G0248300
rosa_samantha	Rh4AG304700 Rh4BG311900 Rh4CG328200 Rh4DG308500
rosa_wichuraiana	Rw4G026480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	121, 308
AccBSI	CCGCTC	1 cut(s)	111
AciI	CCGC	4 cut(s)	111, 1067, 1107, 1124
AclI	AACGTT	1 cut(s)	660
AclWI	GGATC	4 cut(s)	434, 443, 948, 1216
AcuI	CTGAAG	2 cut(s)	876, 1287
AfaI	GTAC	3 cut(s)	687, 768, 1235
AfiI	CCNNNNNNNGG	2 cut(s)	70, 932
AflII	CTTAAG	1 cut(s)	95
AgsI	TTSAA	5 cut(s)	376, 575, 749, 830, 872
AhlI	ACTAGT	4 cut(s)	79, 682, 763, 1049
AjnI	CCWGG	2 cut(s)	46, 311
AluBI	AGCT	7 cut(s)	240, 719, 800, 854, 1030, 1184, 1286
AluI	AGCT	7 cut(s)	240, 719, 800, 854, 1030, 1184, 1286
Alw21I	GWGCWC	1 cut(s)	414
Alw26I	GTCTC	4 cut(s)	347, 456, 725, 806
Alw44I	GTGCAC	1 cut(s)	410
AlwI	GGATC	4 cut(s)	434, 443, 948, 1216
AlwNI	CAGNNNCTG	1 cut(s)	854
AoxI	GGCC	4 cut(s)	192, 922, 1125, 1238
ApaLI	GTGCAC	1 cut(s)	410
ApeKI	GCWGC	3 cut(s)	4, 716, 797
Asp700I	GAANNNNTTC	4 cut(s)	81, 567, 627, 975
AspS9I	GGNCC	3 cut(s)	294, 923, 1258
AsuC2I	CCSGG	1 cut(s)	126
AsuHPI	GGTGA	4 cut(s)	241, 332, 490, 887
AvaII	GGWCC	2 cut(s)	294, 1258
AxyI	CCTNAGG	1 cut(s)	1332
BaeGI	GKGCMC	2 cut(s)	126, 414
BanI	GGYRCC	2 cut(s)	121, 308
BbsI	GAAGAC	2 cut(s)	214, 1029
Bbv12I	GWGCWC	1 cut(s)	414
BbvI	GCAGC	3 cut(s)	16, 728, 809
BccI	CCATC	7 cut(s)	460, 590, 673, 703, 784, 1127, 1220
BciT130I	CCWGG	2 cut(s)	48, 313
BcnI	CCSGG	1 cut(s)	126
BcoDI	GTCTC	4 cut(s)	347, 456, 725, 806
BcuI	ACTAGT	4 cut(s)	79, 682, 763, 1049
BfaI	CTAG	5 cut(s)	80, 683, 764, 1031, 1050
BfrI	CTTAAG	1 cut(s)	95
BisI	GCNGC	4 cut(s)	5, 717, 798, 1125
BlsI	GCNGC	4 cut(s)	6, 718, 799, 1126
Bme1390I	CCNGG	3 cut(s)	48, 126, 313
Bme18I	GGWCC	2 cut(s)	294, 1258
BmgT120I	GGNCC	3 cut(s)	294, 923, 1258
BmiI	GGNNCC	2 cut(s)	123, 310
BmrFI	CCNGG	3 cut(s)	48, 126, 313
BmsI	GCATC	3 cut(s)	413, 778, 1118
BpiI	GAAGAC	2 cut(s)	214, 1029
BpmI	CTGGAG	1 cut(s)	69
BpuEI	CTTGAG	3 cut(s)	127, 241, 653
BpuMI	CCSGG	1 cut(s)	126
Bsa29I	ATCGAT	1 cut(s)	1211
BsaJI	CCNNGG	4 cut(s)	66, 176, 909, 1158
BsaXI	ACNNNNNCTCC	2 cut(s)	105, 135
Bsc4I	CCNNNNNNNGG	2 cut(s)	70, 932
Bse1I	ACTGG	3 cut(s)	338, 361, 1241
Bse21I	CCTNAGG	1 cut(s)	1332
Bse3DI	GCAATG	4 cut(s)	24, 734, 815, 1370
BseBI	CCWGG	2 cut(s)	48, 313
BseCI	ATCGAT	1 cut(s)	1211
BseDI	CCNNGG	4 cut(s)	66, 176, 909, 1158
BseGI	GGATG	4 cut(s)	665, 793, 1112, 1231
BseLI	CCNNNNNNNGG	2 cut(s)	70, 932
BseMI	GCAATG	4 cut(s)	24, 734, 815, 1370
BseMII	CTCAG	6 cut(s)	472, 711, 792, 861, 1233, 1323
BseNI	ACTGG	3 cut(s)	338, 361, 1241
BseRI	GAGGAG	2 cut(s)	38, 893
BseSI	GKGCMC	2 cut(s)	126, 414
BseXI	GCAGC	3 cut(s)	16, 728, 809
Bsh1285I	CGRYCG	1 cut(s)	166
BshFI	GGCC	4 cut(s)	194, 924, 1127, 1240
BshNI	GGYRCC	2 cut(s)	121, 308
BshVI	ATCGAT	1 cut(s)	1211
BsiEI	CGRYCG	1 cut(s)	166
BsiHKAI	GWGCWC	1 cut(s)	414
BsiSI	CCGG	3 cut(s)	126, 292, 330
BslFI	GGGAC	1 cut(s)	903
BslI	CCNNNNNNNGG	2 cut(s)	70, 932
BsmAI	GTCTC	4 cut(s)	347, 456, 725, 806
BsmFI	GGGAC	1 cut(s)	903
BsmI	GAATGC	1 cut(s)	791
BsnI	GGCC	4 cut(s)	194, 924, 1127, 1240
Bsp1286I	GDGCHC	2 cut(s)	126, 414
Bsp143I	GATC	6 cut(s)	426, 448, 531, 940, 1208, 1317
Bsp19I	CCATGG	2 cut(s)	66, 1158
BspACI	CCGC	4 cut(s)	111, 1067, 1107, 1124
BspANI	GGCC	4 cut(s)	194, 924, 1127, 1240
BspCNI	CTCAG	6 cut(s)	471, 712, 793, 860, 1234, 1324
BspDI	ATCGAT	1 cut(s)	1211
BspLI	GGNNCC	2 cut(s)	123, 310
BspPI	GGATC	4 cut(s)	434, 443, 948, 1216
BspQI	GCTCTTC	1 cut(s)	1263
BspT107I	GGYRCC	2 cut(s)	121, 308
BspTI	CTTAAG	1 cut(s)	95
BsrBI	CCGCTC	1 cut(s)	111
BsrDI	GCAATG	4 cut(s)	24, 734, 815, 1370
BsrI	ACTGG	3 cut(s)	338, 361, 1241
BssECI	CCNNGG	4 cut(s)	66, 176, 909, 1158
BssMI	GATC	6 cut(s)	426, 448, 531, 940, 1208, 1317
BssT1I	CCWWGG	3 cut(s)	66, 176, 1158
Bst2UI	CCWGG	2 cut(s)	48, 313
Bst4CI	ACNGT	4 cut(s)	164, 298, 422, 900
Bst6I	CTCTTC	9 cut(s)	92, 536, 552, 558, 618, 696, 723, 804, 1263
BstAFI	CTTAAG	1 cut(s)	95
BstAPI	GCANNNNNTGC	1 cut(s)	788
BstC8I	GCNNGC	1 cut(s)	335
BstDEI	CTNAG	6 cut(s)	458, 720, 801, 847, 1242, 1332
BstDSI	CCRYGG	2 cut(s)	66, 1158
BstF5I	GGATG	4 cut(s)	665, 793, 1112, 1231
BstKTI	GATC	6 cut(s)	429, 451, 534, 943, 1211, 1320
BstMAI	GTCTC	4 cut(s)	347, 456, 725, 806
BstMBI	GATC	6 cut(s)	426, 448, 531, 940, 1208, 1317
BstMCI	CGRYCG	1 cut(s)	166
BstMWI	GCNNNNNNNGC	3 cut(s)	135, 788, 797
BstNI	CCWGG	2 cut(s)	48, 313
BstSCI	CCNGG	3 cut(s)	46, 124, 311
BstSLI	GKGCMC	2 cut(s)	126, 414
BstV1I	GCAGC	3 cut(s)	16, 728, 809
BstV2I	GAAGAC	2 cut(s)	214, 1029
BstX2I	RGATCY	1 cut(s)	426
BstYI	RGATCY	1 cut(s)	426
Bsu15I	ATCGAT	1 cut(s)	1211
Bsu36I	CCTNAGG	1 cut(s)	1332
BsuRI	GGCC	4 cut(s)	194, 924, 1127, 1240
BsuTUI	ATCGAT	1 cut(s)	1211
BtgI	CCRYGG	2 cut(s)	66, 1158
BtsCI	GGATG	4 cut(s)	665, 793, 1112, 1231
BtsIMutI	CAGTG	2 cut(s)	1137, 1173
Cac8I	GCNNGC	1 cut(s)	335
CaiI	CAGNNNCTG	1 cut(s)	854
Cfr13I	GGNCC	3 cut(s)	294, 923, 1258
ClaI	ATCGAT	1 cut(s)	1211
CpoI	CGGWCCG	1 cut(s)	294
Csp6I	GTAC	3 cut(s)	686, 767, 1234
CspCI	CAANNNNNGTGG	2 cut(s)	1183, 1218
CspI	CGGWCCG	1 cut(s)	294
CviAII	CATG	7 cut(s)	67, 282, 434, 741, 822, 944, 1159
CviQI	GTAC	3 cut(s)	686, 767, 1234
DdeI	CTNAG	6 cut(s)	458, 720, 801, 847, 1242, 1332
DpnI	GATC	6 cut(s)	428, 450, 533, 942, 1210, 1319
DpnII	GATC	6 cut(s)	426, 448, 531, 940, 1208, 1317
Eam1104I	CTCTTC	9 cut(s)	92, 536, 552, 558, 618, 696, 723, 804, 1263
EarI	CTCTTC	9 cut(s)	92, 536, 552, 558, 618, 696, 723, 804, 1263
EciI	GGCGGA	1 cut(s)	1082
Eco130I	CCWWGG	3 cut(s)	66, 176, 1158
Eco147I	AGGCCT	1 cut(s)	194
Eco47I	GGWCC	2 cut(s)	294, 1258
Eco57I	CTGAAG	2 cut(s)	876, 1287
Eco81I	CCTNAGG	1 cut(s)	1332
EcoO109I	RGGNCCY	2 cut(s)	923, 1258
EcoRII	CCWGG	2 cut(s)	46, 311
EcoT14I	CCWWGG	3 cut(s)	66, 176, 1158
EcoT22I	ATGCAT	2 cut(s)	287, 793
ErhI	CCWWGG	3 cut(s)	66, 176, 1158
FaeI	CATG	7 cut(s)	70, 285, 437, 744, 825, 947, 1162
FalI	AAGNNNNNCTT	8 cut(s)	89, 121, 373, 405, 555, 587, 615, 647
FaqI	GGGAC	1 cut(s)	903
FatI	CATG	7 cut(s)	66, 281, 433, 740, 821, 943, 1158
FauI	CCCGC	1 cut(s)	1114
Fnu4HI	GCNGC	4 cut(s)	5, 717, 798, 1125
FokI	GGATG	4 cut(s)	652, 800, 1099, 1238
Fsp4HI	GCNGC	4 cut(s)	5, 717, 798, 1125
FspBI	CTAG	5 cut(s)	80, 683, 764, 1031, 1050
GluI	GCNGC	4 cut(s)	5, 717, 798, 1125
GsuI	CTGGAG	1 cut(s)	69
HaeIII	GGCC	4 cut(s)	194, 924, 1127, 1240
HapII	CCGG	3 cut(s)	126, 292, 330
Hin1II	CATG	7 cut(s)	70, 285, 437, 744, 825, 947, 1162
HincII	GTYRAC	1 cut(s)	903
HindII	GTYRAC	1 cut(s)	903
HinfI	GANTC	7 cut(s)	278, 326, 707, 891, 1178, 1244, 1313
HpaI	GTTAAC	1 cut(s)	903
HpaII	CCGG	3 cut(s)	126, 292, 330
HphI	GGTGA	4 cut(s)	241, 332, 490, 887
Hpy166II	GTNNAC	2 cut(s)	412, 903
Hpy188I	TCNGA	5 cut(s)	461, 700, 850, 910, 1303
Hpy188III	TCNNGA	5 cut(s)	106, 572, 632, 1223, 1331
Hpy8I	GTNNAC	2 cut(s)	412, 903
HpyAV	CCTTC	4 cut(s)	112, 310, 936, 1103
HpyCH4III	ACNGT	4 cut(s)	164, 298, 422, 900
HpyCH4IV	ACGT	3 cut(s)	553, 660, 1077
HpyF10VI	GCNNNNNNNGC	3 cut(s)	135, 788, 797
HpyF3I	CTNAG	6 cut(s)	458, 720, 801, 847, 1242, 1332
HpySE526I	ACGT	3 cut(s)	553, 660, 1077
Hsp92II	CATG	7 cut(s)	70, 285, 437, 744, 825, 947, 1162
KspAI	GTTAAC	1 cut(s)	903
Kzo9I	GATC	6 cut(s)	426, 448, 531, 940, 1208, 1317
LguI	GCTCTTC	1 cut(s)	1263
LmnI	GCTCC	1 cut(s)	616
Lsp1109I	GCAGC	3 cut(s)	16, 728, 809
LweI	GCATC	3 cut(s)	413, 778, 1118
MaeI	CTAG	5 cut(s)	80, 683, 764, 1031, 1050
MaeII	ACGT	3 cut(s)	553, 660, 1077
MaeIII	GTNAC	1 cut(s)	320
MalI	GATC	6 cut(s)	428, 450, 533, 942, 1210, 1319
MbiI	CCGCTC	1 cut(s)	111
MboI	GATC	6 cut(s)	426, 448, 531, 940, 1208, 1317
MfeI	CAATTG	1 cut(s)	861
MflI	RGATCY	1 cut(s)	426
MhlI	GDGCHC	2 cut(s)	126, 414
MluCI	AATT	3 cut(s)	580, 861, 883
MlyI	GAGTC	5 cut(s)	272, 320, 885, 1253, 1322
MmeI	TCCRAC	4 cut(s)	280, 404, 919, 1290
Mph1103I	ATGCAT	2 cut(s)	287, 793
MroXI	GAANNNNTTC	4 cut(s)	81, 567, 627, 975
MseI	TTAA	3 cut(s)	96, 902, 1038
MslI	CAYNNNNRTG	3 cut(s)	739, 820, 1142
MspA1I	CMGCKG	4 cut(s)	719, 800, 1184, 1286
MspCI	CTTAAG	1 cut(s)	95
MspI	CCGG	3 cut(s)	126, 292, 330
MspR9I	CCNGG	3 cut(s)	48, 126, 313
MunI	CAATTG	1 cut(s)	861
Mva1269I	GAATGC	1 cut(s)	791
MvaI	CCWGG	2 cut(s)	48, 313
MwoI	GCNNNNNNNGC	3 cut(s)	135, 788, 797
NciI	CCSGG	1 cut(s)	126
NcoI	CCATGG	2 cut(s)	66, 1158
NdeII	GATC	6 cut(s)	426, 448, 531, 940, 1208, 1317
NlaIII	CATG	7 cut(s)	70, 285, 437, 744, 825, 947, 1162
NlaIV	GGNNCC	2 cut(s)	123, 310
NmuCI	GTSAC	1 cut(s)	320
NsiI	ATGCAT	2 cut(s)	287, 793
PceI	AGGCCT	1 cut(s)	194
PciSI	GCTCTTC	1 cut(s)	1263
PctI	GAATGC	1 cut(s)	791
PdmI	GAANNNNTTC	4 cut(s)	81, 567, 627, 975
PfeI	GAWTC	2 cut(s)	707, 1178
PfoI	TCCNGGA	1 cut(s)	46
PkrI	GCNGC	4 cut(s)	6, 718, 799, 1126
PleI	GAGTC	5 cut(s)	272, 320, 885, 1252, 1321
PpsI	GAGTC	5 cut(s)	272, 320, 885, 1252, 1321
PpuMI	RGGWCCY	1 cut(s)	1258
Psp1406I	AACGTT	1 cut(s)	660
Psp5II	RGGWCCY	1 cut(s)	1258
Psp6I	CCWGG	2 cut(s)	46, 311
PspGI	CCWGG	2 cut(s)	46, 311
PspN4I	GGNNCC	2 cut(s)	123, 310
PspPI	GGNCC	3 cut(s)	294, 923, 1258
PspPPI	RGGWCCY	1 cut(s)	1258
PstNI	CAGNNNCTG	1 cut(s)	854
PsuI	RGATCY	1 cut(s)	426
PvuII	CAGCTG	4 cut(s)	719, 800, 1184, 1286
RsaI	GTAC	3 cut(s)	687, 768, 1235
RsaNI	GTAC	3 cut(s)	686, 767, 1234
RseI	CAYNNNNRTG	3 cut(s)	739, 820, 1142
Rsr2I	CGGWCCG	1 cut(s)	294
RsrII	CGGWCCG	1 cut(s)	294
SapI	GCTCTTC	1 cut(s)	1263
SaqAI	TTAA	3 cut(s)	96, 902, 1038
SatI	GCNGC	4 cut(s)	5, 717, 798, 1125
Sau3AI	GATC	6 cut(s)	426, 448, 531, 940, 1208, 1317
Sau96I	GGNCC	3 cut(s)	294, 923, 1258
SchI	GAGTC	5 cut(s)	272, 320, 885, 1253, 1322
ScrFI	CCNGG	3 cut(s)	48, 126, 313
SduI	GDGCHC	2 cut(s)	126, 414
SfaNI	GCATC	3 cut(s)	413, 778, 1118
SinI	GGWCC	2 cut(s)	294, 1258
SmiMI	CAYNNNNRTG	3 cut(s)	739, 820, 1142
SmlI	CTYRAG	4 cut(s)	95, 106, 220, 632
SmoI	CTYRAG	4 cut(s)	95, 106, 220, 632
SpeI	ACTAGT	4 cut(s)	79, 682, 763, 1049
Sse9I	AATT	3 cut(s)	580, 861, 883
SseBI	AGGCCT	1 cut(s)	194
SsiI	CCGC	4 cut(s)	111, 1067, 1107, 1124
SspI	AATATT	1 cut(s)	951
SspMI	CTAG	5 cut(s)	80, 683, 764, 1031, 1050
StuI	AGGCCT	1 cut(s)	194
StyD4I	CCNGG	3 cut(s)	46, 124, 311
StyI	CCWWGG	3 cut(s)	66, 176, 1158
TaaI	ACNGT	4 cut(s)	164, 298, 422, 900
TaiI	ACGT	3 cut(s)	556, 663, 1080
TaqI	TCGA	4 cut(s)	147, 534, 1211, 1316
TasI	AATT	3 cut(s)	580, 861, 883
TauI	GCSGC	1 cut(s)	1127
TfiI	GAWTC	2 cut(s)	707, 1178
Tru1I	TTAA	3 cut(s)	96, 902, 1038
Tru9I	TTAA	3 cut(s)	96, 902, 1038
TscAI	CASTG	2 cut(s)	1144, 1180
TseFI	GTSAC	1 cut(s)	320
TseI	GCWGC	3 cut(s)	4, 716, 797
Tsp45I	GTSAC	1 cut(s)	320
TspDTI	ATGAA	2 cut(s)	699, 918
TspRI	CASTG	2 cut(s)	1144, 1180
Vha464I	CTTAAG	1 cut(s)	95
VneI	GTGCAC	1 cut(s)	410
VpaK11BI	GGWCC	2 cut(s)	294, 1258
XmnI	GAANNNNTTC	4 cut(s)	81, 567, 627, 975
XspI	CTAG	5 cut(s)	80, 683, 764, 1031, 1050
Zsp2I	ATGCAT	2 cut(s)	287, 793

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.