Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0009585

Physical Location & Seq

Genomic Coordinates Reverse (-)

24773132 .. 24780086

Gene Structure 6955 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G233100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2907 bp

ATGGAATCCAGTTCAGACTCAGATGGCTCTCACATCTCCGCCACTCCGCCAAGGAACACTAAACTCTCACGGCAACGACCACCTCGACCACCACCACAGCCACAGCCAAAGCCTTTGGAGCCAAAGTTAAAACCAAAGCCAAAGCCTGCCCTTCTACCCTCCCACAAATCCATACTTAGATTCAGAGCCTCGTCCAAATCCAACCCCATTTCCGAACCCAAAAATCCCTCTTCCGAGCCCGCCCGACCCGACCCACCACCCGATCCATCTCCCCTTCTCTCCCCTATTTTACCTTACCAGATATGCCGCTGGCCGTCCGATCCATCCCGTGCGATTCCCGCCGTTGATTCCGGCGATACCCTTCTCGCCCCGCAGGGCCGACACTTCTACAAGTCACCGTCGTTCTCGAAAATTCGACGAACCACCATCAATTTCGATTCTTTCGAAGTCGACGAGCCGTCGTCTTCTTCTTCGGCGTCAAAGTCTCAGCCGAAGGCAGAGAATGGTGGGTCTGATTCTTCTGTGCCCGATTGGGTACCACCAGAGCCCAAGCGTGAAGTGGCTAGCGGGTCTGGAGTTTCAGCCATAGCTGTAAAGAAACGTTTCGATTTGGTCGGAGGCAATGTGCCTTCGGTGCCTGTAAAGTTCCGAAAAAGTGGGGCTGAGGGGAACTTCGTCAAGCTCAACCTGAATCGCAGGAAACGCAAATTTGTGAACAGAAGAGGAAATAGCAGTTCATCAGGTCGGCGAAAATTTTATAGAAAGGGCAAAAGGAAATTGAAATCACAAGGTGAAAATGAGGGTGAGACTGTTGGTGAAGAAGATGAGTTGGTTACAGATGCTATTGTACAACAACAGAATCGGAAGCAGGACAGTAAAAGACCGAAATTTGATTCCGAATTGTTTGAAGAGGCGGTTTTGGCGGCTCGACATGAGCCGTCGGATGAGAACTTGGTGAAATTGTTGACTCTAACTTATGGGTACGATTCATTCCGAGATGGGCAGTTGGAGGCGATCAAGATGGTGCTTGAAGGAAAGTCGACAATGCTTGTTTTGCCTACGGGTGCTGGCAAATCGTTGTGTTATCAGTTGCCCTCCATAATTTTACCTGGGGTTACTTTGGTTGTTAGTCCATTGATTGCATTGATGATTGACCAGCTGAAGCAGTTGCCTCATATGATTCGTGGTGGTCTTTTGAGTAGCAGTCAGAGACCTGAAGAAGCCTCCGAGACAATTAGGCTGCTTCAACAAGGGGCCATAAAGGTGCTTTTAGTTTCGCCAGAGAGGTTTTTGAATGCAGAATTTCTATCCATATTTTCCGCCACCACAGTTATATCTCTTGTTGTGGTGGATGAAGCTCATTGCATTTCTGAATGGTCACATAATTTCCGTCCCTCATTTATGAGGCTCAGAGCATCTTTGCTTCGTGCCAAGCTCAATGTCAACTGCATTCTTGCAATGACAGCTACTGCCACAGCCATGACTTTGGGTTCTGTGATGTCAGCTTTAGAGATTCCTCCAACCAATCTCATTCAAAAAGCCATACTGAGGGATAATTTACAACTTTCAGTGTCATTGAGCAGAAATAGAATGAAAGATCTGCTGATGTTGATCAAGTCTACTTCATTCACGGATGTTCAGAGCATCATTATCTACTGCAAGTTTCAGTTTGAAACTGAAATGATAAGCCGATACTTATGCGATAATAATATTTCTGCAAAGAGTTACCACAGTGGCATCCCTGCAAAAGATCGTAGTCGTGTGCAGGAGTTGTTTTTCACTAACAAGATTCGTGTGGTTGTTGCAACTGTGGCCTTTGGCATGGGCCTTGACAAGAGGGATATTGGTGCTGTGATTCATTACACCTTGCCAGAAAGCTTGGAGGAGTATGTTCAGGAGATTGGACGTGCTGGACGGGATGGGAGGTTGTCCTATTGCCATCTTTATTTTGATGAGGATACATATTTCAAACTTCGCAGTCTTATGTATAGTGATGGCGTGGATGAATATGTGGTGAACAAATTCCTCTGTCAAGTATTCACCAGTGATGAGAGCTTGCATGGGAAAATTTGTTCGTTGGTTAAAGAAACTGCATCCCGCAAGTTTGATATGAAAGAAGAGGTGATGCTCACACTTCTAACACAGTTGGAGTTGGGTGAAGTGCGGTATTTGCATTTACTTCCAGAGTTAAATGTAACGTGCACTTTGAATTTTCATAAGACATCCCCAGTTTTGCTTGCTGGAAATGATGCTGTTGTTGCTGCAATTCTGAAAAAGTCTGAGACTAAGCAAGGACAATATGTGTTTGACATACCGACTGTGGCAAATAGCACTGGAGTTACAGCTACCATCCTATCAAACCATTTACAGAATTTAAAGTTGAAAGGAGAAGTAACATATGAAGTGAAGGACCAAGCCTACTGTTATACAATTGTTGAAGTCCCTGCAGATCTTTGTTCTCTATCAGCACATCTTACAAAATGGTTATCAGAGGTGGAAAGTTGCAAGGTGCGGAAGTTGGACACAATGTTTAATGCGGCAGTCTTTGCTGTAAATGCTTGTGAGAAGGTGCAAGGTTGTTGTGATGGCCAGCACACACTAAGTTTGCAAAGGAATATTTTGCAATATTTCAATGAAGATGATAATTCTGAAGTCCCTAATAAGATGGGTAAAGACAGCCGATTTTTGCGAGCAGATATAAAAGTCTTTCTGCAGAGCAATTCACAGGCCAAATTCACCCCCAGAGCTGTTGCAAGGATAATGCATGGTATTGCAAGCCCATCCTATCCTTCCACATTCTGGTCTAAAACTCACTTCTGGGGAAGATATACAAATATAGACTTCCAGGTGGTAATGGAAGCAGCAAAGGCAGAATTGATCAATTTTGTGAGGAAGGATGCAGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000724 GO:0000725 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006281 GO:0006284 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007154 GO:0008026 GO:0008094 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009378 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009987 GO:0009991 GO:0010035 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031668 GO:0032392 GO:0032508 GO:0033554 GO:0034641 GO:0034645 GO:0042221 GO:0042623 GO:0042631 GO:0043138 GO:0043140 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0070035 GO:0070887 GO:0071103 GO:0071214 GO:0071229 GO:0071462 GO:0071496 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0104004 GO:0140097 GO:1901360 GO:1901363 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

969

Amino Acids

107.94

Weight (kDa)

9.12

Isoelectric Point (pI)

50.55

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009585)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27880 AT1G27880
fragaria_vesca	FvH4_4g24310 FvH4_4g24310
malus_domestica	MD16G1111900.v1.1
prunus_persica	Prupe.1G233100_v2.0.a1
pyrus_communis	pycom13g09790 pycom16g09490
rosa_chinensis	RchiOBHm_Chr4g0431111
rosa_laevigata	RLG00000006924
rosa_multiflora	Rmu_co7983982.1_g000001 Rmu_co8245775.1_g000001 Rmu_sc0040015.1_g000001
rosa_roxburghii	Rroxscaffold_5G00372700
rosa_rugosa	Rorug04G0248100 Rorug04G0248200 Rorug04G0248300
rosa_samantha	Rh4AG304700 Rh4BG311900 Rh4CG328200 Rh4DG308500
rosa_wichuraiana	Rw4G026480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	535
AccB1I	GGYRCC	2 cut(s)	535, 634
AccB7I	CCANNNNNTGG	1 cut(s)	2799
AccI	GTMKAC	3 cut(s)	450, 1040, 1619
AclI	AACGTT	1 cut(s)	601
AclWI	GGATC	2 cut(s)	257, 314
AcoI	YGGCCR	2 cut(s)	311, 2587
AcuI	CTGAAG	3 cut(s)	1181, 1236, 2670
AcyI	GRCGYC	1 cut(s)	476
AdeI	CACNNNGTG	1 cut(s)	791
AfaI	GTAC	3 cut(s)	537, 849, 983
AfiI	CCNNNNNNNGG	2 cut(s)	1548, 2799
AhdI	GACNNNNNGTC	1 cut(s)	457
AjiI	CACGTC	1 cut(s)	1907
AjnI	CCWGG	2 cut(s)	1108, 2844
AloI	GAACNNNNNNTCC	2 cut(s)	2056, 2088
Alw21I	GWGCWC	1 cut(s)	2204
Alw26I	GTCTC	5 cut(s)	489, 800, 1204, 1223, 2276
Alw44I	GTGCAC	1 cut(s)	2200
AlwI	GGATC	2 cut(s)	257, 314
AlwNI	CAGNNNCTG	1 cut(s)	1469
AoxI	GGCC	7 cut(s)	311, 376, 1254, 1812, 1825, 2587, 2727
ApaLI	GTGCAC	1 cut(s)	2200
ApeKI	GCWGC	3 cut(s)	1240, 2261, 2861
Asp700I	GAANNNNTTC	2 cut(s)	602, 2021
Asp718I	GGTACC	1 cut(s)	535
AspS9I	GGNCC	4 cut(s)	376, 1254, 1825, 2410
AsuII	TTCGAA	1 cut(s)	444
AsuNHI	GCTAGC	1 cut(s)	563
AvaII	GGWCC	1 cut(s)	2410
BaeGI	GKGCMC	2 cut(s)	528, 2204
BalI	TGGCCA	1 cut(s)	2589
BanI	GGYRCC	2 cut(s)	535, 634
BanII	GRGCYC	2 cut(s)	240, 549
BbsI	GAAGAC	1 cut(s)	456
Bbv12I	GWGCWC	1 cut(s)	2204
BbvCI	CCTCAGC	1 cut(s)	663
BbvI	GCAGC	3 cut(s)	1227, 2248, 2873
BceAI	ACGGC	5 cut(s)	86, 298, 326, 442, 922
BcgI	CGANNNNNNTGC	2 cut(s)	1680, 1714
BciT130I	CCWGG	2 cut(s)	1110, 2846
BciVI	GTATCC	1 cut(s)	1951
BclI	TGATCA	2 cut(s)	1611, 2877
BcoDI	GTCTC	5 cut(s)	489, 800, 1204, 1223, 2276
BfaI	CTAG	1 cut(s)	564
BfmI	CTRYAG	2 cut(s)	2445, 2711
BfuI	GTATCC	1 cut(s)	1951
BglII	AGATCT	2 cut(s)	1597, 2449
BisI	GCNGC	6 cut(s)	307, 924, 1241, 2262, 2538, 2862
BlsI	GCNGC	6 cut(s)	308, 925, 1242, 2263, 2539, 2863
Bme1390I	CCNGG	2 cut(s)	1110, 2846
Bme18I	GGWCC	1 cut(s)	2410
BmeRI	GACNNNNNGTC	1 cut(s)	457
BmgBI	CACGTC	1 cut(s)	1907
BmgT120I	GGNCC	4 cut(s)	376, 1254, 1825, 2410
BmiI	GGNNCC	4 cut(s)	120, 537, 636, 1255
BmrFI	CCNGG	2 cut(s)	1110, 2846
BmrI	ACTGGG	1 cut(s)	2222
BmsI	GCATC	8 cut(s)	829, 1424, 1653, 1746, 2102, 2115, 2239, 2887
BmtI	GCTAGC	1 cut(s)	567
BmuI	ACTGGG	1 cut(s)	2222
BpiI	GAAGAC	1 cut(s)	456
BpmI	CTGGAG	2 cut(s)	594, 2355
Bpu10I	CCTNAGC	1 cut(s)	663
Bpu14I	TTCGAA	1 cut(s)	444
BsaBI	GATNNNNATC	1 cut(s)	1610
BsaHI	GRCGYC	1 cut(s)	476
BsaI	GGTCTC	1 cut(s)	1204
BsaJI	CCNNGG	2 cut(s)	50, 1109
BsaXI	ACNNNNNCTCC	4 cut(s)	110, 140, 609, 639
Bsc4I	CCNNNNNNNGG	2 cut(s)	1548, 2799
Bse1I	ACTGG	4 cut(s)	9, 2043, 2228, 2338
Bse3DI	GCAATG	3 cut(s)	628, 1360, 1464
Bse8I	GATNNNNATC	1 cut(s)	1610
BseBI	CCWGG	2 cut(s)	1110, 2846
BseDI	CCNNGG	2 cut(s)	50, 1109
BseJI	GATNNNNATC	1 cut(s)	1610
BseLI	CCNNNNNNNGG	2 cut(s)	1548, 2799
BseMI	GCAATG	3 cut(s)	628, 1360, 1464
BseMII	CTCAG	6 cut(s)	33, 500, 654, 1423, 1538, 2271
BseNI	ACTGG	4 cut(s)	9, 2043, 2228, 2338
BseRI	GAGGAG	1 cut(s)	1898
BseSI	GKGCMC	2 cut(s)	528, 2204
BseXI	GCAGC	3 cut(s)	1227, 2248, 2873
BsgI	GTGCAG	1 cut(s)	1784
BshFI	GGCC	7 cut(s)	313, 378, 1256, 1814, 1827, 2589, 2729
BshNI	GGYRCC	2 cut(s)	535, 634
BsiHKAI	GWGCWC	1 cut(s)	2204
BsiSI	CCGG	1 cut(s)	351
BslFI	GGGAC	3 cut(s)	1377, 2426, 2639
BslI	CCNNNNNNNGG	2 cut(s)	1548, 2799
BsmAI	GTCTC	5 cut(s)	489, 800, 1204, 1223, 2276
BsmFI	GGGAC	3 cut(s)	1377, 2426, 2639
BsmI	GAATGC	2 cut(s)	1300, 1449
BsnI	GGCC	7 cut(s)	313, 378, 1256, 1814, 1827, 2589, 2729
Bso31I	GGTCTC	1 cut(s)	1204
Bsp119I	TTCGAA	1 cut(s)	444
Bsp1286I	GDGCHC	4 cut(s)	240, 528, 549, 2204
Bsp1407I	TGTACA	1 cut(s)	847
Bsp143I	GATC	8 cut(s)	262, 319, 1014, 1597, 1611, 1750, 2449, 2877
BspANI	GGCC	7 cut(s)	313, 378, 1256, 1814, 1827, 2589, 2729
BspCNI	CTCAG	6 cut(s)	32, 499, 655, 1422, 1539, 2272
BspLI	GGNNCC	4 cut(s)	120, 537, 636, 1255
BspMAI	CTGCAG	2 cut(s)	2449, 2715
BspOI	GCTAGC	1 cut(s)	567
BspPI	GGATC	2 cut(s)	257, 314
BspT104I	TTCGAA	1 cut(s)	444
BspT107I	GGYRCC	2 cut(s)	535, 634
BspTNI	GGTCTC	1 cut(s)	1204
BsrDI	GCAATG	3 cut(s)	628, 1360, 1464
BsrGI	TGTACA	1 cut(s)	847
BsrI	ACTGG	4 cut(s)	9, 2043, 2228, 2338
BssECI	CCNNGG	2 cut(s)	50, 1109
BssMI	GATC	8 cut(s)	262, 319, 1014, 1597, 1611, 1750, 2449, 2877
BssNI	GRCGYC	1 cut(s)	476
BssT1I	CCWWGG	1 cut(s)	50
Bst2UI	CCWGG	2 cut(s)	1110, 2846
Bst4CI	ACNGT	9 cut(s)	399, 811, 875, 1330, 1733, 1810, 2145, 2320, 2423
Bst6I	CTCTTC	4 cut(s)	235, 715, 903, 2112
BstACI	GRCGYC	1 cut(s)	476
BstAPI	GCANNNNNTGC	1 cut(s)	2546
BstAUI	TGTACA	1 cut(s)	847
BstBI	TTCGAA	1 cut(s)	444
BstDEI	CTNAG	9 cut(s)	19, 176, 486, 663, 1409, 1547, 2280, 2286, 2600
BstKTI	GATC	8 cut(s)	265, 322, 1017, 1600, 1614, 1753, 2452, 2880
BstMAI	GTCTC	5 cut(s)	489, 800, 1204, 1223, 2276
BstMBI	GATC	8 cut(s)	262, 319, 1014, 1597, 1611, 1750, 2449, 2877
BstNI	CCWGG	2 cut(s)	1110, 2846
BstSCI	CCNGG	2 cut(s)	1108, 2844
BstSFI	CTRYAG	2 cut(s)	2445, 2711
BstSLI	GKGCMC	2 cut(s)	528, 2204
BstV1I	GCAGC	3 cut(s)	1227, 2248, 2873
BstV2I	GAAGAC	1 cut(s)	456
BstX2I	RGATCY	2 cut(s)	1597, 2449
BstXI	CCANNNNNNTGG	1 cut(s)	1486
BstYI	RGATCY	2 cut(s)	1597, 2449
BsuI	GTATCC	1 cut(s)	1951
BsuRI	GGCC	7 cut(s)	313, 378, 1256, 1814, 1827, 2589, 2729
BtrI	CACGTC	1 cut(s)	1907
BtsI	GCAGTG	1 cut(s)	2907
BtsIMutI	CAGTG	5 cut(s)	1575, 1738, 2050, 2331, 2907
CaiI	CAGNNNCTG	1 cut(s)	1469
Cfr13I	GGNCC	4 cut(s)	376, 1254, 1825, 2410
CseI	GACGC	1 cut(s)	465
Csp6I	GTAC	3 cut(s)	536, 848, 982
CviAII	CATG	5 cut(s)	932, 1480, 1822, 2060, 2765
CviQI	GTAC	3 cut(s)	536, 848, 982
DdeI	CTNAG	9 cut(s)	19, 176, 486, 663, 1409, 1547, 2280, 2286, 2600
DpnI	GATC	8 cut(s)	264, 321, 1016, 1599, 1613, 1752, 2451, 2879
DpnII	GATC	8 cut(s)	262, 319, 1014, 1597, 1611, 1750, 2449, 2877
DraI	TTTAAA	1 cut(s)	2376
DraIII	CACNNNGTG	1 cut(s)	791
DriI	GACNNNNNGTC	1 cut(s)	457
EaeI	YGGCCR	2 cut(s)	311, 2587
Eam1104I	CTCTTC	4 cut(s)	235, 715, 903, 2112
Eam1105I	GACNNNNNGTC	1 cut(s)	457
EarI	CTCTTC	4 cut(s)	235, 715, 903, 2112
EciI	GGCGGA	3 cut(s)	28, 36, 1309
Eco130I	CCWWGG	1 cut(s)	50
Eco24I	GRGCYC	2 cut(s)	240, 549
Eco31I	GGTCTC	1 cut(s)	1204
Eco47I	GGWCC	1 cut(s)	2410
Eco57I	CTGAAG	3 cut(s)	1181, 1236, 2670
EcoRII	CCWGG	2 cut(s)	1108, 2844
EcoT14I	CCWWGG	1 cut(s)	50
EcoT22I	ATGCAT	1 cut(s)	2766
EcoT38I	GRGCYC	2 cut(s)	240, 549
ErhI	CCWWGG	1 cut(s)	50
FaeI	CATG	5 cut(s)	935, 1483, 1825, 2063, 2768
FaqI	GGGAC	3 cut(s)	1377, 2426, 2639
FatI	CATG	5 cut(s)	931, 1479, 1821, 2059, 2764
FauI	CCCGC	5 cut(s)	247, 346, 378, 560, 2105
FauNDI	CATATG	2 cut(s)	1176, 2398
FbaI	TGATCA	2 cut(s)	1611, 2877
FblI	GTMKAC	3 cut(s)	450, 1040, 1619
Fnu4HI	GCNGC	6 cut(s)	307, 924, 1241, 2262, 2538, 2862
FriOI	GRGCYC	2 cut(s)	240, 549
Fsp4HI	GCNGC	6 cut(s)	307, 924, 1241, 2262, 2538, 2862
FspBI	CTAG	1 cut(s)	564
GluI	GCNGC	6 cut(s)	307, 924, 1241, 2262, 2538, 2862
GsuI	CTGGAG	2 cut(s)	594, 2355
HaeIII	GGCC	7 cut(s)	313, 378, 1256, 1814, 1827, 2589, 2729
HapII	CCGG	1 cut(s)	351
HgaI	GACGC	1 cut(s)	465
Hin1I	GRCGYC	1 cut(s)	476
Hin1II	CATG	5 cut(s)	935, 1483, 1825, 2063, 2768
HincII	GTYRAC	4 cut(s)	451, 966, 1041, 1444
HindII	GTYRAC	4 cut(s)	451, 966, 1041, 1444
HindIII	AAGCTT	1 cut(s)	1876
HpaII	CCGG	1 cut(s)	351
Hpy166II	GTNNAC	8 cut(s)	451, 715, 966, 1041, 1444, 1620, 2017, 2202
Hpy188III	TCNNGA	5 cut(s)	406, 573, 1018, 1895, 2183
Hpy8I	GTNNAC	8 cut(s)	451, 715, 966, 1041, 1444, 1620, 2017, 2202
Hpy99I	CGWCG	5 cut(s)	403, 420, 455, 463, 943
HpyCH4III	ACNGT	9 cut(s)	399, 811, 875, 1330, 1733, 1810, 2145, 2320, 2423
HpyCH4IV	ACGT	3 cut(s)	601, 1906, 2198
HpyF3I	CTNAG	9 cut(s)	19, 176, 486, 663, 1409, 1547, 2280, 2286, 2600
HpySE526I	ACGT	3 cut(s)	601, 1906, 2198
Hsp92I	GRCGYC	1 cut(s)	476
Hsp92II	CATG	5 cut(s)	935, 1483, 1825, 2063, 2768
KpnI	GGTACC	1 cut(s)	539
Ksp22I	TGATCA	2 cut(s)	1611, 2877
Kzo9I	GATC	8 cut(s)	262, 319, 1014, 1597, 1611, 1750, 2449, 2877
LmnI	GCTCC	1 cut(s)	118
Lsp1109I	GCAGC	3 cut(s)	1227, 2248, 2873
LweI	GCATC	8 cut(s)	829, 1424, 1653, 1746, 2102, 2115, 2239, 2887
MaeI	CTAG	1 cut(s)	564
MaeII	ACGT	3 cut(s)	601, 1906, 2198
MaeIII	GTNAC	8 cut(s)	393, 832, 1114, 1377, 1724, 2194, 2338, 2392
MalI	GATC	8 cut(s)	264, 321, 1016, 1599, 1613, 1752, 2451, 2879
MboI	GATC	8 cut(s)	262, 319, 1014, 1597, 1611, 1750, 2449, 2877
MfeI	CAATTG	1 cut(s)	2430
MflI	RGATCY	2 cut(s)	1597, 2449
MhlI	GDGCHC	4 cut(s)	240, 528, 549, 2204
MlsI	TGGCCA	1 cut(s)	2589
MluNI	TGGCCA	1 cut(s)	2589
MlyI	GAGTC	2 cut(s)	11, 961
MmeI	TCCRAC	7 cut(s)	225, 595, 921, 987, 1544, 2127, 2499
Mox20I	TGGCCA	1 cut(s)	2589
Mph1103I	ATGCAT	1 cut(s)	2766
MroXI	GAANNNNTTC	2 cut(s)	602, 2021
MscI	TGGCCA	1 cut(s)	2589
MseI	TTAA	5 cut(s)	128, 2082, 2189, 2375, 2532
MslI	CAYNNNNRTG	2 cut(s)	1262, 1478
Msp20I	TGGCCA	1 cut(s)	2589
MspA1I	CMGCKG	2 cut(s)	309, 1159
MspI	CCGG	1 cut(s)	351
MspR9I	CCNGG	2 cut(s)	1110, 2846
MunI	CAATTG	1 cut(s)	2430
Mva1269I	GAATGC	2 cut(s)	1300, 1449
MvaI	CCWGG	2 cut(s)	1110, 2846
NdeI	CATATG	2 cut(s)	1176, 2398
NdeII	GATC	8 cut(s)	262, 319, 1014, 1597, 1611, 1750, 2449, 2877
NheI	GCTAGC	1 cut(s)	563
NlaIII	CATG	5 cut(s)	935, 1483, 1825, 2063, 2768
NlaIV	GGNNCC	4 cut(s)	120, 537, 636, 1255
NmuCI	GTSAC	2 cut(s)	393, 1377
NsiI	ATGCAT	1 cut(s)	2766
NspV	TTCGAA	1 cut(s)	444
PcsI	WCGNNNNNNNCGW	3 cut(s)	82, 441, 450
PctI	GAATGC	2 cut(s)	1300, 1449
PdmI	GAANNNNTTC	2 cut(s)	602, 2021
PflMI	CCANNNNNTGG	1 cut(s)	2799
PkrI	GCNGC	6 cut(s)	308, 925, 1242, 2263, 2539, 2863
PleI	GAGTC	2 cut(s)	11, 961
PpsI	GAGTC	2 cut(s)	11, 961
Psp1406I	AACGTT	1 cut(s)	601
Psp6I	CCWGG	2 cut(s)	1108, 2844
PspGI	CCWGG	2 cut(s)	1108, 2844
PspN4I	GGNNCC	4 cut(s)	120, 537, 636, 1255
PspPI	GGNCC	4 cut(s)	376, 1254, 1825, 2410
PstI	CTGCAG	2 cut(s)	2449, 2715
PstNI	CAGNNNCTG	1 cut(s)	1469
PsuI	RGATCY	2 cut(s)	1597, 2449
PvuII	CAGCTG	1 cut(s)	1159
RsaI	GTAC	3 cut(s)	537, 849, 983
RsaNI	GTAC	3 cut(s)	536, 848, 982
RseI	CAYNNNNRTG	2 cut(s)	1262, 1478
SalI	GTCGAC	2 cut(s)	449, 1039
SaqAI	TTAA	5 cut(s)	128, 2082, 2189, 2375, 2532
SatI	GCNGC	6 cut(s)	307, 924, 1241, 2262, 2538, 2862
Sau3AI	GATC	8 cut(s)	262, 319, 1014, 1597, 1611, 1750, 2449, 2877
Sau96I	GGNCC	4 cut(s)	376, 1254, 1825, 2410
SchI	GAGTC	2 cut(s)	11, 961
ScrFI	CCNGG	2 cut(s)	1110, 2846
SduI	GDGCHC	4 cut(s)	240, 528, 549, 2204
SfaNI	GCATC	8 cut(s)	829, 1424, 1653, 1746, 2102, 2115, 2239, 2887
SfcI	CTRYAG	2 cut(s)	2445, 2711
SfuI	TTCGAA	1 cut(s)	444
SinI	GGWCC	1 cut(s)	2410
SmiMI	CAYNNNNRTG	2 cut(s)	1262, 1478
SspI	AATATT	3 cut(s)	1711, 2617, 2627
SspMI	CTAG	1 cut(s)	564
StyD4I	CCNGG	2 cut(s)	1108, 2844
StyI	CCWWGG	1 cut(s)	50
TaaI	ACNGT	9 cut(s)	399, 811, 875, 1330, 1733, 1810, 2145, 2320, 2423
TaiI	ACGT	3 cut(s)	604, 1909, 2201
TaqI	TCGA	9 cut(s)	85, 407, 415, 435, 444, 450, 606, 928, 1040
TaqII	GACCGA	1 cut(s)	898
TatI	WGTACW	1 cut(s)	847
TauI	GCSGC	3 cut(s)	309, 926, 2540
Tru1I	TTAA	5 cut(s)	128, 2082, 2189, 2375, 2532
Tru9I	TTAA	5 cut(s)	128, 2082, 2189, 2375, 2532
TscAI	CASTG	5 cut(s)	1575, 1738, 2050, 2338, 2907
TseFI	GTSAC	2 cut(s)	393, 1377
TseI	GCWGC	3 cut(s)	1240, 2261, 2861
Tsp45I	GTSAC	2 cut(s)	393, 1377
TspGWI	ACGGA	2 cut(s)	1379, 1646
TspRI	CASTG	5 cut(s)	1575, 1738, 2050, 2338, 2907
Van91I	CCANNNNNTGG	1 cut(s)	2799
VneI	GTGCAC	1 cut(s)	2200
VpaK11BI	GGWCC	1 cut(s)	2410
XcmI	CCANNNNNNNNNTGG	1 cut(s)	556
XmiI	GTMKAC	3 cut(s)	450, 1040, 1619
XmnI	GAANNNNTTC	2 cut(s)	602, 2021
XspI	CTAG	1 cut(s)	564
Zsp2I	ATGCAT	1 cut(s)	2766

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.