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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g25060 FvH4_4g25060 FvH4_4g25060 FvH4_4g25060 |
| malus_domestica | MD13G1106900.v1.1 MD16G1107000.v1.1 |
| prunus_persica | Prupe.1G239400_v2.0.a1 Prupe.1G239400_v2.0.a1 |
| pyrus_communis | pycom13g09270 pycom16g09110 |
| rosa_chinensis | RchiOBHm_Chr4g0432241 |
| rosa_laevigata | RLG00000006860 |
| rosa_multiflora | Rmu_co7961612.1_g000001 Rmu_sc0001084.1_g000049 Rmu_sc0039253.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00373690 |
| rosa_rugosa | Rorug04G0255400 Rorug04G0255500 |
| rosa_samantha | Rh4AG312600 Rh4BG320100 Rh4CG335300 Rh4DG315500 |
| rosa_wichuraiana | Rw4G027170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 727 |
| AatII | GACGTC | 2 cut(s) | 36, 111 |
| Acc36I | ACCTGC | 1 cut(s) | 727 |
| AccB1I | GGYRCC | 3 cut(s) | 1892, 2521, 3149 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 800 |
| AccBSI | CCGCTC | 1 cut(s) | 2594 |
| AccI | GTMKAC | 3 cut(s) | 1546, 2399, 3333 |
| AccII | CGCG | 2 cut(s) | 228, 823 |
| AciI | CCGC | 9 cut(s) | 21, 67, 823, 1461, 2594, 2630, 2735, 2888, 3261 |
| AclWI | GGATC | 5 cut(s) | 609, 2219, 2232, 2749, 3229 |
| AcoI | YGGCCR | 3 cut(s) | 72, 2047, 2889 |
| AcsI | RAATTY | 6 cut(s) | 119, 351, 966, 2383, 3322, 3395 |
| AcuI | CTGAAG | 5 cut(s) | 1020, 1770, 2207, 2589, 2627 |
| AcyI | GRCGYC | 2 cut(s) | 33, 108 |
| AfaI | GTAC | 6 cut(s) | 333, 1330, 1953, 2365, 3110, 3250 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 800, 2191, 2476, 2629, 2799, 3237 |
| AjnI | CCWGG | 3 cut(s) | 246, 1678, 1770 |
| AloI | GAACNNNNNNTCC | 1 cut(s) | 34 |
| Alw21I | GWGCWC | 4 cut(s) | 20, 1019, 1576, 3086 |
| Alw26I | GTCTC | 3 cut(s) | 88, 560, 2775 |
| AlwI | GGATC | 5 cut(s) | 609, 2219, 2232, 2749, 3229 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 587, 962 |
| Ama87I | CYCGRG | 1 cut(s) | 13 |
| AoxI | GGCC | 5 cut(s) | 72, 2047, 2889, 3099, 3342 |
| ApeKI | GCWGC | 7 cut(s) | 230, 693, 772, 1085, 1445, 2265, 3353 |
| ApoI | RAATTY | 6 cut(s) | 119, 351, 966, 2383, 3322, 3395 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2375, 2407 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1696, 3031, 3399 |
| AspLEI | GCGC | 4 cut(s) | 230, 698, 1104, 1230 |
| AspS9I | GGNCC | 3 cut(s) | 178, 975, 3100 |
| AsuC2I | CCSGG | 1 cut(s) | 182 |
| AsuHPI | GGTGA | 9 cut(s) | 70, 305, 575, 708, 1475, 1694, 1834, 1970, 2567 |
| AsuII | TTCGAA | 1 cut(s) | 509 |
| AvaI | CYCGRG | 1 cut(s) | 13 |
| AvaII | GGWCC | 2 cut(s) | 178, 975 |
| AxyI | CCTNAGG | 1 cut(s) | 2850 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 179, 212 |
| BalI | TGGCCA | 1 cut(s) | 74 |
| BamHI | GGATCC | 1 cut(s) | 2224 |
| BanI | GGYRCC | 3 cut(s) | 1892, 2521, 3149 |
| BanII | GRGCYC | 2 cut(s) | 20, 3086 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 490, 522 |
| BbsI | GAAGAC | 3 cut(s) | 852, 1880, 3384 |
| Bbv12I | GWGCWC | 4 cut(s) | 20, 1019, 1576, 3086 |
| BbvI | GCAGC | 7 cut(s) | 217, 705, 784, 1097, 1457, 2277, 3365 |
| BccI | CCATC | 8 cut(s) | 83, 1334, 1778, 2072, 2873, 2938, 3128, 3197 |
| BceAI | ACGGC | 1 cut(s) | 2034 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 421, 455, 2867, 2901 |
| BciT130I | CCWGG | 3 cut(s) | 248, 1680, 1772 |
| BciVI | GTATCC | 1 cut(s) | 2029 |
| BclI | TGATCA | 2 cut(s) | 541, 2308 |
| BcnI | CCSGG | 1 cut(s) | 182 |
| BcoDI | GTCTC | 3 cut(s) | 88, 560, 2775 |
| BfaI | CTAG | 5 cut(s) | 47, 1455, 1848, 2721, 3270 |
| BfmI | CTRYAG | 5 cut(s) | 468, 737, 909, 1494, 2530 |
| BfuAI | ACCTGC | 1 cut(s) | 727 |
| BfuI | GTATCC | 1 cut(s) | 2029 |
| BglII | AGATCT | 3 cut(s) | 1478, 2179, 2717 |
| BisI | GCNGC | 8 cut(s) | 231, 694, 773, 1086, 1446, 2266, 2889, 3354 |
| BlpI | GCTNAGC | 1 cut(s) | 3085 |
| BlsI | GCNGC | 8 cut(s) | 232, 695, 774, 1087, 1447, 2267, 2890, 3355 |
| BmcAI | AGTACT | 1 cut(s) | 1330 |
| Bme1390I | CCNGG | 4 cut(s) | 182, 248, 1680, 1772 |
| Bme18I | GGWCC | 2 cut(s) | 178, 975 |
| BmeT110I | CYCGRG | 1 cut(s) | 13 |
| BmgT120I | GGNCC | 3 cut(s) | 178, 975, 3100 |
| BmiI | GGNNCC | 7 cut(s) | 936, 976, 1894, 2226, 2523, 3102, 3151 |
| BmrFI | CCNGG | 4 cut(s) | 182, 248, 1680, 1772 |
| BpiI | GAAGAC | 3 cut(s) | 852, 1880, 3384 |
| BpmI | CTGGAG | 3 cut(s) | 777, 825, 2103 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3085 |
| Bpu14I | TTCGAA | 1 cut(s) | 509 |
| BpuEI | CTTGAG | 3 cut(s) | 649, 1623, 2693 |
| BpuMI | CCSGG | 1 cut(s) | 182 |
| Bsa29I | ATCGAT | 1 cut(s) | 2744 |
| BsaBI | GATNNNNATC | 3 cut(s) | 540, 543, 2746 |
| BsaHI | GRCGYC | 2 cut(s) | 33, 108 |
| BsaJI | CCNNGG | 5 cut(s) | 24, 181, 1771, 1878, 2689 |
| BsaXI | ACNNNNNCTCC | 5 cut(s) | 32, 2166, 2196, 3247, 3277 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 800, 2191, 2476, 2629, 2799, 3237 |
| Bse118I | RCCGGY | 1 cut(s) | 233 |
| Bse1I | ACTGG | 5 cut(s) | 767, 794, 1887, 2982, 3095 |
| Bse21I | CCTNAGG | 1 cut(s) | 2850 |
| Bse3DI | GCAATG | 5 cut(s) | 437, 1045, 1761, 2089, 3220 |
| Bse8I | GATNNNNATC | 3 cut(s) | 540, 543, 2746 |
| BseBI | CCWGG | 3 cut(s) | 248, 1680, 1772 |
| BseCI | ATCGAT | 1 cut(s) | 2744 |
| BseDI | CCNNGG | 5 cut(s) | 24, 181, 1771, 1878, 2689 |
| BseGI | GGATG | 2 cut(s) | 34, 1657 |
| BseJI | GATNNNNATC | 3 cut(s) | 540, 543, 2746 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 800, 2191, 2476, 2629, 2799, 3237 |
| BseMI | GCAATG | 5 cut(s) | 437, 1045, 1761, 2089, 3220 |
| BseNI | ACTGG | 5 cut(s) | 767, 794, 1887, 2982, 3095 |
| BseRI | GAGGAG | 1 cut(s) | 2489 |
| BseXI | GCAGC | 7 cut(s) | 217, 705, 784, 1097, 1457, 2277, 3365 |
| BseYI | CCCAGC | 1 cut(s) | 2435 |
| BsgI | GTGCAG | 2 cut(s) | 791, 1542 |
| Bsh1236I | CGCG | 2 cut(s) | 228, 823 |
| BshFI | GGCC | 5 cut(s) | 74, 2049, 2891, 3101, 3344 |
| BshNI | GGYRCC | 3 cut(s) | 1892, 2521, 3149 |
| BshVI | ATCGAT | 1 cut(s) | 2744 |
| BsiHKAI | GWGCWC | 4 cut(s) | 20, 1019, 1576, 3086 |
| BsiHKCI | CYCGRG | 1 cut(s) | 13 |
| BsiSI | CCGG | 4 cut(s) | 87, 181, 234, 2859 |
| BslFI | GGGAC | 6 cut(s) | 201, 988, 1192, 1802, 2452, 2815 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 800, 2191, 2476, 2629, 2799, 3237 |
| BsmAI | GTCTC | 3 cut(s) | 88, 560, 2775 |
| BsmBI | CGTCTC | 1 cut(s) | 88 |
| BsmFI | GGGAC | 6 cut(s) | 201, 988, 1192, 1802, 2452, 2815 |
| BsnI | GGCC | 5 cut(s) | 74, 2049, 2891, 3101, 3344 |
| BsoBI | CYCGRG | 1 cut(s) | 13 |
| Bsp119I | TTCGAA | 1 cut(s) | 509 |
| Bsp1286I | GDGCHC | 4 cut(s) | 20, 1019, 1576, 3086 |
| Bsp1407I | TGTACA | 2 cut(s) | 331, 1951 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3085 |
| BspACI | CCGC | 9 cut(s) | 21, 67, 823, 1461, 2594, 2630, 2735, 2888, 3261 |
| BspANI | GGCC | 5 cut(s) | 74, 2049, 2891, 3101, 3344 |
| BspDI | ATCGAT | 1 cut(s) | 2744 |
| BspFNI | CGCG | 2 cut(s) | 228, 823 |
| BspHI | TCATGA | 1 cut(s) | 1942 |
| BspLI | GGNNCC | 7 cut(s) | 936, 976, 1894, 2226, 2523, 3102, 3151 |
| BspMAI | CTGCAG | 1 cut(s) | 1498 |
| BspMI | ACCTGC | 1 cut(s) | 727 |
| BspPI | GGATC | 5 cut(s) | 609, 2219, 2232, 2749, 3229 |
| BspQI | GCTCTTC | 2 cut(s) | 756, 3074 |
| BspT104I | TTCGAA | 1 cut(s) | 509 |
| BspT107I | GGYRCC | 3 cut(s) | 1892, 2521, 3149 |
| BsrBI | CCGCTC | 1 cut(s) | 2594 |
| BsrDI | GCAATG | 5 cut(s) | 437, 1045, 1761, 2089, 3220 |
| BsrFI | RCCGGY | 1 cut(s) | 233 |
| BsrGI | TGTACA | 2 cut(s) | 331, 1951 |
| BsrI | ACTGG | 5 cut(s) | 767, 794, 1887, 2982, 3095 |
| BssAI | RCCGGY | 1 cut(s) | 233 |
| BssECI | CCNNGG | 5 cut(s) | 24, 181, 1771, 1878, 2689 |
| BssNI | GRCGYC | 2 cut(s) | 33, 108 |
| BssT1I | CCWWGG | 1 cut(s) | 1878 |
| Bst2UI | CCWGG | 3 cut(s) | 248, 1680, 1772 |
| Bst6I | CTCTTC | 8 cut(s) | 756, 1467, 1618, 1715, 2196, 2490, 2565, 3074 |
| BstACI | GRCGYC | 2 cut(s) | 33, 108 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1067 |
| BstAUI | TGTACA | 2 cut(s) | 331, 1951 |
| BstBI | TTCGAA | 1 cut(s) | 509 |
| BstC8I | GCNNGC | 5 cut(s) | 2289, 2377, 2713, 3154, 3417 |
| BstEII | GGTNACC | 1 cut(s) | 2465 |
| BstF5I | GGATG | 2 cut(s) | 34, 1657 |
| BstFNI | CGCG | 2 cut(s) | 228, 823 |
| BstHHI | GCGC | 4 cut(s) | 230, 698, 1104, 1230 |
| BstMAI | GTCTC | 3 cut(s) | 88, 560, 2775 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 198, 772, 1067, 2721, 3350 |
| BstNI | CCWGG | 3 cut(s) | 248, 1680, 1772 |
| BstPI | GGTNACC | 1 cut(s) | 2465 |
| BstSCI | CCNGG | 4 cut(s) | 180, 246, 1678, 1770 |
| BstSFI | CTRYAG | 5 cut(s) | 468, 737, 909, 1494, 2530 |
| BstUI | CGCG | 2 cut(s) | 228, 823 |
| BstV1I | GCAGC | 7 cut(s) | 217, 705, 784, 1097, 1457, 2277, 3365 |
| BstV2I | GAAGAC | 3 cut(s) | 852, 1880, 3384 |
| BstX2I | RGATCY | 5 cut(s) | 1478, 2179, 2224, 2717, 3221 |
| BstYI | RGATCY | 5 cut(s) | 1478, 2179, 2224, 2717, 3221 |
| Bsu15I | ATCGAT | 1 cut(s) | 2744 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2850 |
| BsuI | GTATCC | 1 cut(s) | 2029 |
| BsuRI | GGCC | 5 cut(s) | 74, 2049, 2891, 3101, 3344 |
| BsuTUI | ATCGAT | 1 cut(s) | 2744 |
| BtgZI | GCGATG | 1 cut(s) | 530 |
| BtsCI | GGATG | 2 cut(s) | 34, 1657 |
| BtsIMutI | CAGTG | 8 cut(s) | 36, 424, 774, 978, 1017, 1894, 1922, 3102 |
| BveI | ACCTGC | 1 cut(s) | 727 |
| Cac8I | GCNNGC | 5 cut(s) | 2289, 2377, 2713, 3154, 3417 |
| CaiI | CAGNNNCTG | 2 cut(s) | 587, 962 |
| CciI | TCATGA | 1 cut(s) | 1942 |
| CfoI | GCGC | 4 cut(s) | 230, 698, 1104, 1230 |
| Cfr10I | RCCGGY | 1 cut(s) | 233 |
| Cfr13I | GGNCC | 3 cut(s) | 178, 975, 3100 |
| ClaI | ATCGAT | 1 cut(s) | 2744 |
| CseI | GACGC | 1 cut(s) | 198 |
| Csp6I | GTAC | 6 cut(s) | 332, 1329, 1952, 2364, 3109, 3249 |
| CviQI | GTAC | 6 cut(s) | 332, 1329, 1952, 2364, 3109, 3249 |
| DraI | TTTAAA | 1 cut(s) | 171 |
| EaeI | YGGCCR | 3 cut(s) | 72, 2047, 2889 |
| Eam1104I | CTCTTC | 8 cut(s) | 756, 1467, 1618, 1715, 2196, 2490, 2565, 3074 |
| EarI | CTCTTC | 8 cut(s) | 756, 1467, 1618, 1715, 2196, 2490, 2565, 3074 |
| EciI | GGCGGA | 1 cut(s) | 10 |
| Ecl136II | GAGCTC | 2 cut(s) | 18, 3084 |
| Eco130I | CCWWGG | 1 cut(s) | 1878 |
| Eco24I | GRGCYC | 2 cut(s) | 20, 3086 |
| Eco32I | GATATC | 1 cut(s) | 2748 |
| Eco47I | GGWCC | 2 cut(s) | 178, 975 |
| Eco53kI | GAGCTC | 2 cut(s) | 18, 3084 |
| Eco57I | CTGAAG | 5 cut(s) | 1020, 1770, 2207, 2589, 2627 |
| Eco81I | CCTNAGG | 1 cut(s) | 2850 |
| Eco88I | CYCGRG | 1 cut(s) | 13 |
| Eco91I | GGTNACC | 1 cut(s) | 2465 |
| EcoICRI | GAGCTC | 2 cut(s) | 18, 3084 |
| EcoO65I | GGTNACC | 1 cut(s) | 2465 |
| EcoRI | GAATTC | 1 cut(s) | 966 |
| EcoRII | CCWGG | 3 cut(s) | 246, 1678, 1770 |
| EcoRV | GATATC | 1 cut(s) | 2748 |
| EcoT14I | CCWWGG | 1 cut(s) | 1878 |
| EcoT22I | ATGCAT | 2 cut(s) | 1047, 2827 |
| EcoT38I | GRGCYC | 2 cut(s) | 20, 3086 |
| ErhI | CCWWGG | 1 cut(s) | 1878 |
| Esp3I | CGTCTC | 1 cut(s) | 88 |
| FaqI | GGGAC | 6 cut(s) | 201, 988, 1192, 1802, 2452, 2815 |
| FauI | CCCGC | 1 cut(s) | 74 |
| FauNDI | CATATG | 1 cut(s) | 2680 |
| FbaI | TGATCA | 2 cut(s) | 541, 2308 |
| FblI | GTMKAC | 3 cut(s) | 1546, 2399, 3333 |
| Fnu4HI | GCNGC | 8 cut(s) | 231, 694, 773, 1086, 1446, 2266, 2889, 3354 |
| FokI | GGATG | 2 cut(s) | 41, 1644 |
| FriOI | GRGCYC | 2 cut(s) | 20, 3086 |
| Fsp4HI | GCNGC | 8 cut(s) | 231, 694, 773, 1086, 1446, 2266, 2889, 3354 |
| FspBI | CTAG | 5 cut(s) | 47, 1455, 1848, 2721, 3270 |
| GlaI | GCGC | 4 cut(s) | 229, 697, 1103, 1229 |
| GluI | GCNGC | 8 cut(s) | 231, 694, 773, 1086, 1446, 2266, 2889, 3354 |
| GsaI | CCCAGC | 1 cut(s) | 2439 |
| GsuI | CTGGAG | 3 cut(s) | 777, 825, 2103 |
| HaeIII | GGCC | 5 cut(s) | 74, 2049, 2891, 3101, 3344 |
| HapII | CCGG | 4 cut(s) | 87, 181, 234, 2859 |
| HgaI | GACGC | 1 cut(s) | 198 |
| HhaI | GCGC | 4 cut(s) | 230, 698, 1104, 1230 |
| Hin1I | GRCGYC | 2 cut(s) | 33, 108 |
| Hin6I | GCGC | 4 cut(s) | 228, 696, 1102, 1228 |
| HinP1I | GCGC | 4 cut(s) | 228, 696, 1102, 1228 |
| HincII | GTYRAC | 2 cut(s) | 244, 1371 |
| HindII | GTYRAC | 2 cut(s) | 244, 1371 |
| HpaII | CCGG | 4 cut(s) | 87, 181, 234, 2859 |
| HphI | GGTGA | 9 cut(s) | 70, 305, 575, 708, 1475, 1694, 1834, 1970, 2567 |
| Hpy99I | CGWCG | 2 cut(s) | 110, 823 |
| HpyAV | CCTTC | 8 cut(s) | 1405, 1461, 1646, 2421, 2483, 3119, 3238, 3334 |
| HpyCH4IV | ACGT | 3 cut(s) | 33, 108, 887 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 198, 772, 1067, 2721, 3350 |
| HpySE526I | ACGT | 3 cut(s) | 33, 108, 887 |
| Hsp92I | GRCGYC | 2 cut(s) | 33, 108 |
| HspAI | GCGC | 4 cut(s) | 228, 696, 1102, 1228 |
| Ksp22I | TGATCA | 2 cut(s) | 541, 2308 |
| LguI | GCTCTTC | 2 cut(s) | 756, 3074 |
| Lsp1109I | GCAGC | 7 cut(s) | 217, 705, 784, 1097, 1457, 2277, 3365 |
| MaeI | CTAG | 5 cut(s) | 47, 1455, 1848, 2721, 3270 |
| MaeII | ACGT | 3 cut(s) | 33, 108, 887 |
| MbiI | CCGCTC | 1 cut(s) | 2594 |
| MfeI | CAATTG | 2 cut(s) | 2238, 2304 |
| MflI | RGATCY | 5 cut(s) | 1478, 2179, 2224, 2717, 3221 |
| MhlI | GDGCHC | 4 cut(s) | 20, 1019, 1576, 3086 |
| MlsI | TGGCCA | 1 cut(s) | 74 |
| MluNI | TGGCCA | 1 cut(s) | 74 |
| MlyI | GAGTC | 9 cut(s) | 203, 249, 953, 1739, 2293, 2405, 2684, 2878, 2998 |
| MmeI | TCCRAC | 2 cut(s) | 129, 2473 |
| Mox20I | TGGCCA | 1 cut(s) | 74 |
| Mph1103I | ATGCAT | 2 cut(s) | 1047, 2827 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1696, 3031, 3399 |
| MscI | TGGCCA | 1 cut(s) | 74 |
| MseI | TTAA | 7 cut(s) | 170, 222, 1170, 1509, 1626, 2502, 3039 |
| MslI | CAYNNNNRTG | 3 cut(s) | 534, 1518, 2010 |
| Msp20I | TGGCCA | 1 cut(s) | 74 |
| MspA1I | CMGCKG | 2 cut(s) | 775, 1703 |
| MspI | CCGG | 4 cut(s) | 87, 181, 234, 2859 |
| MspR9I | CCNGG | 4 cut(s) | 182, 248, 1680, 1772 |
| MunI | CAATTG | 2 cut(s) | 2238, 2304 |
| MvaI | CCWGG | 3 cut(s) | 248, 1680, 1772 |
| MvnI | CGCG | 2 cut(s) | 228, 823 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 198, 772, 1067, 2721, 3350 |
| NciI | CCSGG | 1 cut(s) | 182 |
| NdeI | CATATG | 1 cut(s) | 2680 |
| NlaIV | GGNNCC | 7 cut(s) | 936, 976, 1894, 2226, 2523, 3102, 3151 |
| NmeAIII | GCCGAG | 3 cut(s) | 49, 772, 1289 |
| NmuCI | GTSAC | 5 cut(s) | 34, 1807, 1840, 2216, 3001 |
| NsiI | ATGCAT | 2 cut(s) | 1047, 2827 |
| NspV | TTCGAA | 1 cut(s) | 509 |
| PagI | TCATGA | 1 cut(s) | 1942 |
| PaqCI | CACCTGC | 1 cut(s) | 727 |
| PciSI | GCTCTTC | 2 cut(s) | 756, 3074 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1696, 3031, 3399 |
| PflFI | GACNNNGTC | 1 cut(s) | 1551 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 800 |
| PkrI | GCNGC | 8 cut(s) | 232, 695, 774, 1087, 1447, 2267, 2890, 3355 |
| PleI | GAGTC | 9 cut(s) | 203, 248, 953, 1739, 2293, 2404, 2683, 2877, 2998 |
| PpsI | GAGTC | 9 cut(s) | 203, 248, 953, 1739, 2293, 2404, 2683, 2877, 2998 |
| Psp124BI | GAGCTC | 2 cut(s) | 20, 3086 |
| Psp6I | CCWGG | 3 cut(s) | 246, 1678, 1770 |
| PspEI | GGTNACC | 1 cut(s) | 2465 |
| PspFI | CCCAGC | 1 cut(s) | 2435 |
| PspGI | CCWGG | 3 cut(s) | 246, 1678, 1770 |
| PspN4I | GGNNCC | 7 cut(s) | 936, 976, 1894, 2226, 2523, 3102, 3151 |
| PspPI | GGNCC | 3 cut(s) | 178, 975, 3100 |
| PstI | CTGCAG | 1 cut(s) | 1498 |
| PstNI | CAGNNNCTG | 2 cut(s) | 587, 962 |
| PsuI | RGATCY | 5 cut(s) | 1478, 2179, 2224, 2717, 3221 |
| PsyI | GACNNNGTC | 1 cut(s) | 1551 |
| PvuII | CAGCTG | 2 cut(s) | 775, 1703 |
| RsaI | GTAC | 6 cut(s) | 333, 1330, 1953, 2365, 3110, 3250 |
| RsaNI | GTAC | 6 cut(s) | 332, 1329, 1952, 2364, 3109, 3249 |
| RseI | CAYNNNNRTG | 3 cut(s) | 534, 1518, 2010 |
| SacI | GAGCTC | 2 cut(s) | 20, 3086 |
| SapI | GCTCTTC | 2 cut(s) | 756, 3074 |
| SaqAI | TTAA | 7 cut(s) | 170, 222, 1170, 1509, 1626, 2502, 3039 |
| SatI | GCNGC | 8 cut(s) | 231, 694, 773, 1086, 1446, 2266, 2889, 3354 |
| Sau96I | GGNCC | 3 cut(s) | 178, 975, 3100 |
| ScaI | AGTACT | 1 cut(s) | 1330 |
| SchI | GAGTC | 9 cut(s) | 203, 249, 953, 1739, 2293, 2405, 2684, 2878, 2998 |
| ScrFI | CCNGG | 4 cut(s) | 182, 248, 1680, 1772 |
| SduI | GDGCHC | 4 cut(s) | 20, 1019, 1576, 3086 |
| SfcI | CTRYAG | 5 cut(s) | 468, 737, 909, 1494, 2530 |
| SfuI | TTCGAA | 1 cut(s) | 509 |
| SinI | GGWCC | 2 cut(s) | 178, 975 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 534, 1518, 2010 |
| SmlI | CTYRAG | 3 cut(s) | 664, 1638, 2672 |
| SmoI | CTYRAG | 3 cut(s) | 664, 1638, 2672 |
| SsiI | CCGC | 9 cut(s) | 21, 67, 823, 1461, 2594, 2630, 2735, 2888, 3261 |
| SspI | AATATT | 1 cut(s) | 2458 |
| SspMI | CTAG | 5 cut(s) | 47, 1455, 1848, 2721, 3270 |
| SstI | GAGCTC | 2 cut(s) | 20, 3086 |
| StyD4I | CCNGG | 4 cut(s) | 180, 246, 1678, 1770 |
| StyI | CCWWGG | 1 cut(s) | 1878 |
| TaiI | ACGT | 3 cut(s) | 36, 111, 890 |
| TaqI | TCGA | 5 cut(s) | 431, 509, 1823, 2744, 3372 |
| TatI | WGTACW | 4 cut(s) | 331, 1328, 1951, 3108 |
| TauI | GCSGC | 1 cut(s) | 2891 |
| Tru1I | TTAA | 7 cut(s) | 170, 222, 1170, 1509, 1626, 2502, 3039 |
| Tru9I | TTAA | 7 cut(s) | 170, 222, 1170, 1509, 1626, 2502, 3039 |
| TscAI | CASTG | 8 cut(s) | 43, 424, 774, 985, 1024, 1894, 1922, 3102 |
| TseFI | GTSAC | 5 cut(s) | 34, 1807, 1840, 2216, 3001 |
| TseI | GCWGC | 7 cut(s) | 230, 693, 772, 1085, 1445, 2265, 3353 |
| Tsp45I | GTSAC | 5 cut(s) | 34, 1807, 1840, 2216, 3001 |
| TspGWI | ACGGA | 1 cut(s) | 162 |
| TspRI | CASTG | 8 cut(s) | 43, 424, 774, 985, 1024, 1894, 1922, 3102 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1551 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 800 |
| VpaK11BI | GGWCC | 2 cut(s) | 178, 975 |
| XapI | RAATTY | 6 cut(s) | 119, 351, 966, 2383, 3322, 3395 |
| XbaI | TCTAGA | 1 cut(s) | 1454 |
| XmiI | GTMKAC | 3 cut(s) | 1546, 2399, 3333 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1696, 3031, 3399 |
| XspI | CTAG | 5 cut(s) | 47, 1455, 1848, 2721, 3270 |
| ZraI | GACGTC | 2 cut(s) | 34, 109 |
| ZrmI | AGTACT | 1 cut(s) | 1330 |
| Zsp2I | ATGCAT | 2 cut(s) | 1047, 2827 |