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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g25060 FvH4_4g25060 FvH4_4g25060 FvH4_4g25060 |
| malus_domestica | MD13G1106900.v1.1 MD16G1107000.v1.1 |
| prunus_persica | Prupe.1G239400_v2.0.a1 Prupe.1G239400_v2.0.a1 |
| pyrus_communis | pycom13g09270 pycom16g09110 |
| rosa_chinensis | RchiOBHm_Chr4g0432241 |
| rosa_laevigata | RLG00000006860 |
| rosa_multiflora | Rmu_co7961612.1_g000001 Rmu_sc0001084.1_g000049 Rmu_sc0039253.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00373690 |
| rosa_rugosa | Rorug04G0255400 Rorug04G0255500 |
| rosa_samantha | Rh4AG312600 Rh4BG320100 Rh4CG335300 Rh4DG315500 |
| rosa_wichuraiana | Rw4G027170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 36 |
| Acc65I | GGTACC | 1 cut(s) | 412 |
| AccB1I | GGYRCC | 3 cut(s) | 412, 2764, 3416 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2434 |
| AccI | GTMKAC | 4 cut(s) | 243, 450, 1558, 2642 |
| AciI | CCGC | 6 cut(s) | 584, 2840, 2869, 2876, 2984, 3528 |
| AclWI | GGATC | 6 cut(s) | 594, 2462, 2475, 2910, 2998, 3496 |
| AcoI | YGGCCR | 2 cut(s) | 72, 3279 |
| AcsI | RAATTY | 5 cut(s) | 159, 297, 330, 2626, 3100 |
| AcuI | CTGAAG | 7 cut(s) | 900, 1005, 1589, 1671, 2835, 2976, 3408 |
| AcyI | GRCGYC | 2 cut(s) | 33, 240 |
| AdeI | CACNNNGTG | 1 cut(s) | 252 |
| AfaI | GTAC | 8 cut(s) | 414, 822, 1342, 1968, 2196, 2380, 2808, 3371 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 2434, 2875, 3504 |
| AgeI | ACCGGT | 1 cut(s) | 2132 |
| AjnI | CCWGG | 3 cut(s) | 1394, 1785, 2463 |
| AloI | GAACNNNNNNTCC | 3 cut(s) | 34, 3367, 3399 |
| Alw21I | GWGCWC | 2 cut(s) | 20, 3347 |
| Alw26I | GTCTC | 5 cut(s) | 88, 545, 743, 2615, 2691 |
| AlwI | GGATC | 6 cut(s) | 594, 2462, 2475, 2910, 2998, 3496 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 947 |
| Ama87I | CYCGRG | 1 cut(s) | 13 |
| AoxI | GGCC | 4 cut(s) | 72, 3150, 3279, 3360 |
| ApeKI | GCWGC | 6 cut(s) | 591, 678, 1457, 1691, 2892, 2973 |
| ApoI | RAATTY | 5 cut(s) | 159, 297, 330, 2626, 3100 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 2593, 2618, 2625, 2650 |
| AseI | ATTAAT | 1 cut(s) | 1515 |
| AsiGI | ACCGGT | 1 cut(s) | 2132 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 697, 1711, 1725, 3036, 3292 |
| Asp718I | GGTACC | 1 cut(s) | 412 |
| AspLEI | GCGC | 5 cut(s) | 683, 1089, 1215, 1586, 3129 |
| AspS9I | GGNCC | 3 cut(s) | 178, 3150, 3361 |
| AsuII | TTCGAA | 1 cut(s) | 147 |
| AvaI | CYCGRG | 1 cut(s) | 13 |
| AvaII | GGWCC | 1 cut(s) | 178 |
| AxyI | CCTNAGG | 1 cut(s) | 3027 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 861, 894 |
| BalI | TGGCCA | 2 cut(s) | 74, 3281 |
| BamHI | GGATCC | 1 cut(s) | 2467 |
| BanI | GGYRCC | 3 cut(s) | 412, 2764, 3416 |
| BanII | GRGCYC | 2 cut(s) | 20, 3347 |
| BauI | CACGAG | 1 cut(s) | 52 |
| BbsI | GAAGAC | 3 cut(s) | 837, 1895, 2123 |
| Bbv12I | GWGCWC | 2 cut(s) | 20, 3347 |
| BbvCI | CCTCAGC | 1 cut(s) | 3021 |
| BbvI | GCAGC | 6 cut(s) | 603, 690, 1469, 1678, 2879, 2960 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1420, 1454 |
| BciT130I | CCWGG | 3 cut(s) | 1396, 1787, 2465 |
| BciVI | GTATCC | 5 cut(s) | 637, 1012, 1834, 2044, 2272 |
| BclI | TGATCA | 1 cut(s) | 1248 |
| BcoDI | GTCTC | 5 cut(s) | 88, 545, 743, 2615, 2691 |
| BfaI | CTAG | 8 cut(s) | 47, 425, 566, 1863, 2091, 2457, 2769, 2970 |
| BfmI | CTRYAG | 2 cut(s) | 894, 1506 |
| BfuI | GTATCC | 5 cut(s) | 637, 1012, 1834, 2044, 2272 |
| BglII | AGATCT | 1 cut(s) | 2422 |
| BisI | GCNGC | 6 cut(s) | 592, 679, 1458, 1692, 2893, 2974 |
| BlpI | GCTNAGC | 2 cut(s) | 732, 3346 |
| BlsI | GCNGC | 6 cut(s) | 593, 680, 1459, 1693, 2894, 2975 |
| BmcAI | AGTACT | 1 cut(s) | 1342 |
| Bme1390I | CCNGG | 3 cut(s) | 1396, 1787, 2465 |
| Bme18I | GGWCC | 1 cut(s) | 178 |
| BmeT110I | CYCGRG | 1 cut(s) | 13 |
| BmgT120I | GGNCC | 3 cut(s) | 178, 3150, 3361 |
| BmiI | GGNNCC | 9 cut(s) | 190, 310, 414, 2079, 2469, 2766, 3151, 3363, 3418 |
| BmrFI | CCNGG | 3 cut(s) | 1396, 1787, 2465 |
| BmrI | ACTGGG | 1 cut(s) | 1571 |
| BmuI | ACTGGG | 1 cut(s) | 1571 |
| BpiI | GAAGAC | 3 cut(s) | 837, 1895, 2123 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 632, 664 |
| BpmI | CTGGAG | 4 cut(s) | 762, 810, 2346, 2411 |
| Bpu10I | CCTNAGC | 1 cut(s) | 3021 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 732, 3346 |
| Bpu14I | TTCGAA | 1 cut(s) | 147 |
| BpuEI | CTTGAG | 2 cut(s) | 634, 2903 |
| BsaBI | GATNNNNATC | 2 cut(s) | 506, 2995 |
| BsaHI | GRCGYC | 2 cut(s) | 33, 240 |
| BsaJI | CCNNGG | 6 cut(s) | 24, 1786, 1893, 2121, 2935, 3111 |
| BsaWI | WCCGGW | 2 cut(s) | 180, 2132 |
| BsaXI | ACNNNNNCTCC | 3 cut(s) | 32, 1527, 1557 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 2434, 2875, 3504 |
| Bse118I | RCCGGY | 2 cut(s) | 1004, 2132 |
| Bse1I | ACTGG | 5 cut(s) | 779, 1566, 3064, 3239, 3282 |
| Bse21I | CCTNAGG | 1 cut(s) | 3027 |
| Bse3DI | GCAATG | 6 cut(s) | 416, 529, 1776, 2332, 2673, 3487 |
| Bse8I | GATNNNNATC | 2 cut(s) | 506, 2995 |
| BseBI | CCWGG | 3 cut(s) | 1396, 1787, 2465 |
| BseDI | CCNNGG | 6 cut(s) | 24, 1786, 1893, 2121, 2935, 3111 |
| BseGI | GGATG | 4 cut(s) | 34, 1669, 2182, 2688 |
| BseJI | GATNNNNATC | 2 cut(s) | 506, 2995 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 2434, 2875, 3504 |
| BseMI | GCAATG | 6 cut(s) | 416, 529, 1776, 2332, 2673, 3487 |
| BseNI | ACTGG | 5 cut(s) | 779, 1566, 3064, 3239, 3282 |
| BseRI | GAGGAG | 3 cut(s) | 2018, 2246, 2732 |
| BseXI | GCAGC | 6 cut(s) | 603, 690, 1469, 1678, 2879, 2960 |
| BseYI | CCCAGC | 1 cut(s) | 2678 |
| BsgI | GTGCAG | 3 cut(s) | 1424, 1929, 2157 |
| BshFI | GGCC | 4 cut(s) | 74, 3152, 3281, 3362 |
| BshNI | GGYRCC | 3 cut(s) | 412, 2764, 3416 |
| BshTI | ACCGGT | 1 cut(s) | 2132 |
| BsiHKAI | GWGCWC | 2 cut(s) | 20, 3347 |
| BsiHKCI | CYCGRG | 1 cut(s) | 13 |
| BsiSI | CCGG | 4 cut(s) | 87, 181, 1005, 2133 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 2434, 2875, 3504 |
| BsmAI | GTCTC | 5 cut(s) | 88, 545, 743, 2615, 2691 |
| BsmBI | CGTCTC | 1 cut(s) | 88 |
| BsmI | GAATGC | 3 cut(s) | 514, 788, 3520 |
| BsnI | GGCC | 4 cut(s) | 74, 3152, 3281, 3362 |
| BsoBI | CYCGRG | 1 cut(s) | 13 |
| Bsp119I | TTCGAA | 1 cut(s) | 147 |
| Bsp1286I | GDGCHC | 2 cut(s) | 20, 3347 |
| Bsp1407I | TGTACA | 2 cut(s) | 1966, 2194 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 732, 3346 |
| BspACI | CCGC | 6 cut(s) | 584, 2840, 2869, 2876, 2984, 3528 |
| BspANI | GGCC | 4 cut(s) | 74, 3152, 3281, 3362 |
| BspHI | TCATGA | 3 cut(s) | 1957, 2185, 2713 |
| BspLI | GGNNCC | 9 cut(s) | 190, 310, 414, 2079, 2469, 2766, 3151, 3363, 3418 |
| BspMAI | CTGCAG | 1 cut(s) | 1510 |
| BspPI | GGATC | 6 cut(s) | 594, 2462, 2475, 2910, 2998, 3496 |
| BspQI | GCTCTTC | 1 cut(s) | 3335 |
| BspT104I | TTCGAA | 1 cut(s) | 147 |
| BspT107I | GGYRCC | 3 cut(s) | 412, 2764, 3416 |
| BsrDI | GCAATG | 6 cut(s) | 416, 529, 1776, 2332, 2673, 3487 |
| BsrFI | RCCGGY | 2 cut(s) | 1004, 2132 |
| BsrGI | TGTACA | 2 cut(s) | 1966, 2194 |
| BsrI | ACTGG | 5 cut(s) | 779, 1566, 3064, 3239, 3282 |
| BssAI | RCCGGY | 2 cut(s) | 1004, 2132 |
| BssECI | CCNNGG | 6 cut(s) | 24, 1786, 1893, 2121, 2935, 3111 |
| BssNI | GRCGYC | 2 cut(s) | 33, 240 |
| BssSI | CACGAG | 1 cut(s) | 52 |
| BssT1I | CCWWGG | 4 cut(s) | 1893, 2121, 2935, 3111 |
| Bst2BI | CACGAG | 1 cut(s) | 52 |
| Bst2UI | CCWGG | 3 cut(s) | 1396, 1787, 2465 |
| Bst6I | CTCTTC | 9 cut(s) | 281, 741, 1479, 1630, 1730, 2439, 2733, 2811, 3335 |
| BstACI | GRCGYC | 2 cut(s) | 33, 240 |
| BstAUI | TGTACA | 2 cut(s) | 1966, 2194 |
| BstBI | TTCGAA | 1 cut(s) | 147 |
| BstC8I | GCNNGC | 5 cut(s) | 2509, 2532, 2620, 2978, 3421 |
| BstF5I | GGATG | 4 cut(s) | 34, 1669, 2182, 2688 |
| BstHHI | GCGC | 5 cut(s) | 683, 1089, 1215, 1586, 3129 |
| BstMAI | GTCTC | 5 cut(s) | 88, 545, 743, 2615, 2691 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 2863, 2970, 3333, 3342 |
| BstNI | CCWGG | 3 cut(s) | 1396, 1787, 2465 |
| BstNSI | RCATGY | 2 cut(s) | 2813, 2980 |
| BstSCI | CCNGG | 3 cut(s) | 1394, 1785, 2463 |
| BstSFI | CTRYAG | 2 cut(s) | 894, 1506 |
| BstV1I | GCAGC | 6 cut(s) | 603, 690, 1469, 1678, 2879, 2960 |
| BstV2I | GAAGAC | 3 cut(s) | 837, 1895, 2123 |
| BstX2I | RGATCY | 4 cut(s) | 2422, 2467, 2902, 3488 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 320, 2942 |
| BstYI | RGATCY | 4 cut(s) | 2422, 2467, 2902, 3488 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3027 |
| BsuI | GTATCC | 5 cut(s) | 637, 1012, 1834, 2044, 2272 |
| BsuRI | GGCC | 4 cut(s) | 74, 3152, 3281, 3362 |
| BtsCI | GGATG | 4 cut(s) | 34, 1669, 2182, 2688 |
| BtsI | GCAGTG | 1 cut(s) | 1030 |
| Cac8I | GCNNGC | 5 cut(s) | 2509, 2532, 2620, 2978, 3421 |
| CaiI | CAGNNNCTG | 1 cut(s) | 947 |
| CciI | TCATGA | 3 cut(s) | 1957, 2185, 2713 |
| CfoI | GCGC | 5 cut(s) | 683, 1089, 1215, 1586, 3129 |
| Cfr10I | RCCGGY | 2 cut(s) | 1004, 2132 |
| Cfr13I | GGNCC | 3 cut(s) | 178, 3150, 3361 |
| CseI | GACGC | 1 cut(s) | 229 |
| Csp6I | GTAC | 8 cut(s) | 413, 821, 1341, 1967, 2195, 2379, 2807, 3370 |
| CspAI | ACCGGT | 1 cut(s) | 2132 |
| CviQI | GTAC | 8 cut(s) | 413, 821, 1341, 1967, 2195, 2379, 2807, 3370 |
| DraI | TTTAAA | 1 cut(s) | 489 |
| DraIII | CACNNNGTG | 1 cut(s) | 252 |
| EaeI | YGGCCR | 2 cut(s) | 72, 3279 |
| Eam1104I | CTCTTC | 9 cut(s) | 281, 741, 1479, 1630, 1730, 2439, 2733, 2811, 3335 |
| EarI | CTCTTC | 9 cut(s) | 281, 741, 1479, 1630, 1730, 2439, 2733, 2811, 3335 |
| EciI | GGCGGA | 1 cut(s) | 599 |
| Ecl136II | GAGCTC | 2 cut(s) | 18, 3345 |
| Eco130I | CCWWGG | 4 cut(s) | 1893, 2121, 2935, 3111 |
| Eco24I | GRGCYC | 2 cut(s) | 20, 3347 |
| Eco47I | GGWCC | 1 cut(s) | 178 |
| Eco53kI | GAGCTC | 2 cut(s) | 18, 3345 |
| Eco57I | CTGAAG | 7 cut(s) | 900, 1005, 1589, 1671, 2835, 2976, 3408 |
| Eco81I | CCTNAGG | 1 cut(s) | 3027 |
| Eco88I | CYCGRG | 1 cut(s) | 13 |
| EcoICRI | GAGCTC | 2 cut(s) | 18, 3345 |
| EcoRII | CCWGG | 3 cut(s) | 1394, 1785, 2463 |
| EcoT14I | CCWWGG | 4 cut(s) | 1893, 2121, 2935, 3111 |
| EcoT22I | ATGCAT | 2 cut(s) | 790, 3088 |
| EcoT38I | GRGCYC | 2 cut(s) | 20, 3347 |
| ErhI | CCWWGG | 4 cut(s) | 1893, 2121, 2935, 3111 |
| Esp3I | CGTCTC | 1 cut(s) | 88 |
| FauI | CCCGC | 1 cut(s) | 3521 |
| FbaI | TGATCA | 1 cut(s) | 1248 |
| FblI | GTMKAC | 4 cut(s) | 243, 450, 1558, 2642 |
| Fnu4HI | GCNGC | 6 cut(s) | 592, 679, 1458, 1692, 2893, 2974 |
| FokI | GGATG | 4 cut(s) | 41, 1656, 2189, 2695 |
| FriOI | GRGCYC | 2 cut(s) | 20, 3347 |
| Fsp4HI | GCNGC | 6 cut(s) | 592, 679, 1458, 1692, 2893, 2974 |
| FspBI | CTAG | 8 cut(s) | 47, 425, 566, 1863, 2091, 2457, 2769, 2970 |
| GlaI | GCGC | 5 cut(s) | 682, 1088, 1214, 1585, 3128 |
| GluI | GCNGC | 6 cut(s) | 592, 679, 1458, 1692, 2893, 2974 |
| GsaI | CCCAGC | 1 cut(s) | 2682 |
| GsuI | CTGGAG | 4 cut(s) | 762, 810, 2346, 2411 |
| HaeIII | GGCC | 4 cut(s) | 74, 3152, 3281, 3362 |
| HapII | CCGG | 4 cut(s) | 87, 181, 1005, 2133 |
| HgaI | GACGC | 1 cut(s) | 229 |
| HhaI | GCGC | 5 cut(s) | 683, 1089, 1215, 1586, 3129 |
| Hin1I | GRCGYC | 2 cut(s) | 33, 240 |
| Hin6I | GCGC | 5 cut(s) | 681, 1087, 1213, 1584, 3127 |
| HinP1I | GCGC | 5 cut(s) | 681, 1087, 1213, 1584, 3127 |
| HincII | GTYRAC | 3 cut(s) | 244, 1383, 1976 |
| HindII | GTYRAC | 3 cut(s) | 244, 1383, 1976 |
| HindIII | AAGCTT | 2 cut(s) | 696, 3291 |
| HpaII | CCGG | 4 cut(s) | 87, 181, 1005, 2133 |
| Hpy99I | CGWCG | 1 cut(s) | 245 |
| HpyAV | CCTTC | 9 cut(s) | 166, 714, 721, 1473, 1564, 1658, 2664, 2726, 3383 |
| HpyCH4IV | ACGT | 1 cut(s) | 33 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 2863, 2970, 3333, 3342 |
| HpySE526I | ACGT | 1 cut(s) | 33 |
| Hsp92I | GRCGYC | 2 cut(s) | 33, 240 |
| HspAI | GCGC | 5 cut(s) | 681, 1087, 1213, 1584, 3127 |
| KpnI | GGTACC | 1 cut(s) | 416 |
| Ksp22I | TGATCA | 1 cut(s) | 1248 |
| LguI | GCTCTTC | 1 cut(s) | 3335 |
| LmnI | GCTCC | 2 cut(s) | 23, 1465 |
| Lsp1109I | GCAGC | 6 cut(s) | 603, 690, 1469, 1678, 2879, 2960 |
| MaeI | CTAG | 8 cut(s) | 47, 425, 566, 1863, 2091, 2457, 2769, 2970 |
| MaeII | ACGT | 1 cut(s) | 33 |
| MaeIII | GTNAC | 7 cut(s) | 34, 1228, 1822, 1855, 2083, 2459, 2821 |
| MflI | RGATCY | 4 cut(s) | 2422, 2467, 2902, 3488 |
| MhlI | GDGCHC | 2 cut(s) | 20, 3347 |
| MlsI | TGGCCA | 2 cut(s) | 74, 3281 |
| MluNI | TGGCCA | 2 cut(s) | 74, 3281 |
| MlyI | GAGTC | 5 cut(s) | 827, 945, 1754, 2648, 3274 |
| MmeI | TCCRAC | 2 cut(s) | 129, 2415 |
| Mox20I | TGGCCA | 2 cut(s) | 74, 3281 |
| Mph1103I | ATGCAT | 2 cut(s) | 790, 3088 |
| MroXI | GAANNNNTTC | 5 cut(s) | 697, 1711, 1725, 3036, 3292 |
| MscI | TGGCCA | 2 cut(s) | 74, 3281 |
| MseI | TTAA | 7 cut(s) | 222, 488, 1515, 1638, 2745, 3194, 3243 |
| MslI | CAYNNNNRTG | 1 cut(s) | 519 |
| Msp20I | TGGCCA | 2 cut(s) | 74, 3281 |
| MspA1I | CMGCKG | 1 cut(s) | 1718 |
| MspI | CCGG | 4 cut(s) | 87, 181, 1005, 2133 |
| MspR9I | CCNGG | 3 cut(s) | 1396, 1787, 2465 |
| Mva1269I | GAATGC | 3 cut(s) | 514, 788, 3520 |
| MvaI | CCWGG | 3 cut(s) | 1396, 1787, 2465 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 2863, 2970, 3333, 3342 |
| NlaIV | GGNNCC | 9 cut(s) | 190, 310, 414, 2079, 2469, 2766, 3151, 3363, 3418 |
| NmuCI | GTSAC | 6 cut(s) | 34, 1822, 1855, 2083, 2459, 2821 |
| NsiI | ATGCAT | 2 cut(s) | 790, 3088 |
| NspI | RCATGY | 2 cut(s) | 2813, 2980 |
| NspV | TTCGAA | 1 cut(s) | 147 |
| PaeI | GCATGC | 1 cut(s) | 2980 |
| PagI | TCATGA | 3 cut(s) | 1957, 2185, 2713 |
| PciSI | GCTCTTC | 1 cut(s) | 3335 |
| PctI | GAATGC | 3 cut(s) | 514, 788, 3520 |
| PdmI | GAANNNNTTC | 5 cut(s) | 697, 1711, 1725, 3036, 3292 |
| PflFI | GACNNNGTC | 1 cut(s) | 1563 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2434 |
| PfoI | TCCNGGA | 1 cut(s) | 1394 |
| PinAI | ACCGGT | 1 cut(s) | 2132 |
| PkrI | GCNGC | 6 cut(s) | 593, 680, 1459, 1693, 2894, 2975 |
| PleI | GAGTC | 5 cut(s) | 827, 945, 1754, 2647, 3273 |
| PpsI | GAGTC | 5 cut(s) | 827, 945, 1754, 2647, 3273 |
| PshBI | ATTAAT | 1 cut(s) | 1515 |
| Psp124BI | GAGCTC | 2 cut(s) | 20, 3347 |
| Psp6I | CCWGG | 3 cut(s) | 1394, 1785, 2463 |
| PspFI | CCCAGC | 1 cut(s) | 2678 |
| PspGI | CCWGG | 3 cut(s) | 1394, 1785, 2463 |
| PspN4I | GGNNCC | 9 cut(s) | 190, 310, 414, 2079, 2469, 2766, 3151, 3363, 3418 |
| PspPI | GGNCC | 3 cut(s) | 178, 3150, 3361 |
| PstI | CTGCAG | 1 cut(s) | 1510 |
| PstNI | CAGNNNCTG | 1 cut(s) | 947 |
| PsuI | RGATCY | 4 cut(s) | 2422, 2467, 2902, 3488 |
| PsyI | GACNNNGTC | 1 cut(s) | 1563 |
| PvuII | CAGCTG | 1 cut(s) | 1718 |
| RsaI | GTAC | 8 cut(s) | 414, 822, 1342, 1968, 2196, 2380, 2808, 3371 |
| RsaNI | GTAC | 8 cut(s) | 413, 821, 1341, 1967, 2195, 2379, 2807, 3370 |
| RseI | CAYNNNNRTG | 1 cut(s) | 519 |
| SacI | GAGCTC | 2 cut(s) | 20, 3347 |
| SalI | GTCGAC | 1 cut(s) | 242 |
| SapI | GCTCTTC | 1 cut(s) | 3335 |
| SaqAI | TTAA | 7 cut(s) | 222, 488, 1515, 1638, 2745, 3194, 3243 |
| SatI | GCNGC | 6 cut(s) | 592, 679, 1458, 1692, 2893, 2974 |
| Sau96I | GGNCC | 3 cut(s) | 178, 3150, 3361 |
| ScaI | AGTACT | 1 cut(s) | 1342 |
| SchI | GAGTC | 5 cut(s) | 827, 945, 1754, 2648, 3274 |
| ScrFI | CCNGG | 3 cut(s) | 1396, 1787, 2465 |
| SduI | GDGCHC | 2 cut(s) | 20, 3347 |
| SfcI | CTRYAG | 2 cut(s) | 894, 1506 |
| SfuI | TTCGAA | 1 cut(s) | 147 |
| SgrAI | CRCCGGYG | 1 cut(s) | 2132 |
| SinI | GGWCC | 1 cut(s) | 178 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 519 |
| SmlI | CTYRAG | 2 cut(s) | 649, 2918 |
| SmoI | CTYRAG | 2 cut(s) | 649, 2918 |
| SphI | GCATGC | 1 cut(s) | 2980 |
| SsiI | CCGC | 6 cut(s) | 584, 2840, 2869, 2876, 2984, 3528 |
| SspI | AATATT | 1 cut(s) | 445 |
| SspMI | CTAG | 8 cut(s) | 47, 425, 566, 1863, 2091, 2457, 2769, 2970 |
| SstI | GAGCTC | 2 cut(s) | 20, 3347 |
| StyD4I | CCNGG | 3 cut(s) | 1394, 1785, 2463 |
| StyI | CCWWGG | 4 cut(s) | 1893, 2121, 2935, 3111 |
| TaiI | ACGT | 1 cut(s) | 36 |
| TaqI | TCGA | 4 cut(s) | 147, 163, 243, 1430 |
| TaqII | GACCGA | 1 cut(s) | 2544 |
| TatI | WGTACW | 5 cut(s) | 1340, 1966, 2194, 2806, 3369 |
| Tru1I | TTAA | 7 cut(s) | 222, 488, 1515, 1638, 2745, 3194, 3243 |
| Tru9I | TTAA | 7 cut(s) | 222, 488, 1515, 1638, 2745, 3194, 3243 |
| TseFI | GTSAC | 6 cut(s) | 34, 1822, 1855, 2083, 2459, 2821 |
| TseI | GCWGC | 6 cut(s) | 591, 678, 1457, 1691, 2892, 2973 |
| Tsp45I | GTSAC | 6 cut(s) | 34, 1822, 1855, 2083, 2459, 2821 |
| TspGWI | ACGGA | 2 cut(s) | 263, 2603 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1563 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2434 |
| VpaK11BI | GGWCC | 1 cut(s) | 178 |
| VspI | ATTAAT | 1 cut(s) | 1515 |
| XapI | RAATTY | 5 cut(s) | 159, 297, 330, 2626, 3100 |
| XceI | RCATGY | 2 cut(s) | 2813, 2980 |
| XmiI | GTMKAC | 4 cut(s) | 243, 450, 1558, 2642 |
| XmnI | GAANNNNTTC | 5 cut(s) | 697, 1711, 1725, 3036, 3292 |
| XspI | CTAG | 8 cut(s) | 47, 425, 566, 1863, 2091, 2457, 2769, 2970 |
| ZraI | GACGTC | 1 cut(s) | 34 |
| ZrmI | AGTACT | 1 cut(s) | 1342 |
| Zsp2I | ATGCAT | 2 cut(s) | 790, 3088 |