Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0008862

Physical Location & Seq

Genomic Coordinates Forward (+)

42811894 .. 42817522

Gene Structure 5629 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0255400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2607 bp

ATGGATTCAGTTGAAGGAAATAACCATGTCGATTATACTGAGGATGAATCTGCTGAGCATTCTTTTTCTCCAGAAGCCGTGGAGTTAAATGGTGTGGATGGCGAGCCTGAGATACTTCCTAGAGTTGGAGAAGAGTACCAGGTTGAACTTCCCCCTCTAATGGCTGTATCTGATTATCTCTGCCGTCTAGAGAACCAAACTGATGCAGAAAGCACAGATAGTAGTTCATACAGATTTCTGGTGGGATTGCCACTACCGGTAATGTGGATCAATGAGGAAGTTGAGTGTAAAAAACATGAATCCAATGTGGGTTTTAATGATGCAGTTGACGTGGCCCATAAAAATGAGTCTCTAAGATCTGAATATGTCAGTGGGTTGGTTGTTTCAGAAAGGGACAGCTTTAAATGCAAAGCTGAGCCCATGGATGTTGAGTCAGATCAGGGAATAATTTTGAATGGGTCTGCGAAGTTGGATGTGAAACAGGAAATGGTAATGCCTGAAAATCAAAATGGATGTCCGGTTCCTGGTACCTCGAGTGTTAGTTGGAGTCACATAGAAGAAGCCAGTTTTCTTCTTGGTTTATATATCTTTGGGAAGGACCTTGTTCTGGTGACAAAATTCGTTGGTAGTAAACAGATGGGAGATATATTATCATTCTACTATGGGATCTTTTACAAGTCTAAAAGCTACAGCAGGTGGTCAGAATGCAAGAAAATGAGAAGCAGAAAATGTATATTTGGACAAAGAATATTTACAGGATTAAGGCAACATGAGTTGTTATCCCGTTTGCGTCCTCATGTGTCAGAAGAGTGCCAAAATACTTTACTTGAGGTCTCAAAGACATTTGGGGAAGGAAAGATATTACTAGAAGAATATGTATTCATTCTAAAATCTAGAGTTGGATTGGATGCTCTTGTGGAGGCAGTGGGAATTGGTAAAGGGAAGCAAGATCTCACAGGCATTGCCATGGAGACCCCAAAGTCCAATCAGGCTGTTACTGGTCGCCCAGAAATACCAGTTGGCAAAGCATGCTCTGCACTCTCACCATTGGAAATAGTTGGCTTTCTGACAGGTAACTTCCGGCTCAGTAAAGCCCGTTCAAACGATCTCTTCTGGGAAGCTGTTTGGCCACGTTTGCTTGCTAGAGGGTGGCACTCTGAGCAGCCTAATCAGGGTCGCTTTGCTAATGCTTCCAAGCATTCATTGGTCTTTCTTCTTCCTGGGATTAAGAAGTTCTCCAGAAGGAAACTGGTGAAGGGAAGTCACTATTTTGACTCGGTAAGTGATGTGCTCAGCAAAGTTGCTTCTGACCCAGAGCTCCTCGAGCTTGAGACAGGAGCAGATAAAGGTTCCACGAGCAAGGATGAAAATGGTTGGGCCCATGAAACAAAGCCTGATGGTTTCCCAAGCCAGCAACGGCACTGTTATTTGAAACCTCGTACCCCCAGTCGTGGTACAGATACCATGAAGTTCACTGTTGTGGATACTAGTCTGGCCTATGGTAAAACATGCAAGGTGAGGGAACTGAGAAGCTTACCAGTCGAGTTGAATACCTCCGTCTCCACCTCGAGTACTGATTCTGAAGATGAGGATGAAGTTGCTTCTGATGAATCAACACAGATATCTAACTCTGCAGATACCTTGTGTTCCCGTAGGAATGAGGTCAATGTTTCAAAGACCGTAAAGACCAGTTTGGGTAGAAATGAATCCAAAGATGACAAGTATTTCAAGTGTGATGCTTCAGAGTGGGAGCATAGAGCTTTTAGTCCACATGTGACCAATGTGGCTGCGAAGATCCCCAAGGAGCAGAACATTGATATATGCAATTACATGATGCCTAGAAGAGCAATGAAGTTCCAAAGGAGCCAGAAAGTGGTGCCTGAAAATAAAAATGGTACGGTTCCTGTTTCAAAAAAACGTCAGCGATTAGCTACTTGTAGTAGCAAAAAGACCAGCAGGATCAGCAACCACATCTCACAAGATCCCATGTTACAACAAGAGGCCTGCAACTTTGGCCACATCTCTGAAGTCAGCGAGAAAAACCTCTCTGCAGTGGATCCATCTCCTGAGAGGTTATCATCCACCAGTACATCTAGAGGAGGCAGCCCAGTGATTAGTAGTGAAGCTGTTCTTGGTAGCAACAATATGGGTGCGGGACAACATTATCATTGGCCTCAATTCGATTTGAACGAGGAACCCGTTTCTCTAGATGCTGAAACTGATGAACCTATGATAGAAAGACAACATGATGGAACAACGCAGGAACCAGATGGTCTGCATTCAATGGAAACCTCTGACTGTATGGCTGCTTCTGAGCAGCAGCCTGCAGTTAACCCTCGGAGACAGAGCACAAGAAATCGTCCACTGACCGCTAAGGCACTGGAAGCTTTTGCTTGTGGATTTTTAGACACAAAGCAATCGCGGAAGAGTAGGGATGTATTTCCTCGGGAAAAATCCAAATCCAGACGTGCTCGAGCAAGGATGCAAGTTCCTGAGAGTTTTGATACTAGTGTCGTGGATTATAATTTGCAGGAAACCAGTACTGCTGTCCATAGTAGTAATGCTGACGGATACAGCGAGCTTGACATGGTTTCCCAAATGGGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

868

Amino Acids

96.67

Weight (kDa)

5.74

Isoelectric Point (pI)

52.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7952	PF25826	182 - 312	5.3e-63	Domain of unknown function (DUF7952)
DUF7650	PF24662	351 - 438	2.9e-44	Domain of unknown function (DUF7650)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008862)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g25060 FvH4_4g25060 FvH4_4g25060 FvH4_4g25060
malus_domestica	MD13G1106900.v1.1 MD16G1107000.v1.1
prunus_persica	Prupe.1G239400_v2.0.a1 Prupe.1G239400_v2.0.a1
pyrus_communis	pycom13g09270 pycom16g09110
rosa_chinensis	RchiOBHm_Chr4g0432241
rosa_laevigata	RLG00000006860
rosa_multiflora	Rmu_co7961612.1_g000001 Rmu_sc0001084.1_g000049 Rmu_sc0039253.1_g000001
rosa_roxburghii	Rroxscaffold_5G00373690
rosa_rugosa	Rorug04G0255400 Rorug04G0255500
rosa_samantha	Rh4AG312600 Rh4BG320100 Rh4CG335300 Rh4DG315500
rosa_wichuraiana	Rw4G027170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2523
AarI	CACCTGC	1 cut(s)	684
AasI	GACNNNNNNGTC	1 cut(s)	979
Acc36I	ACCTGC	1 cut(s)	684
Acc65I	GGTACC	1 cut(s)	527
AccB1I	GGYRCC	2 cut(s)	527, 1876
AccB7I	CCANNNNNTGG	1 cut(s)	1873
AccII	CGCG	1 cut(s)	2422
AciI	CCGC	3 cut(s)	2153, 2370, 2422
AclWI	GGATC	7 cut(s)	275, 674, 1789, 1967, 1976, 2051, 2064
AcoI	YGGCCR	2 cut(s)	1127, 2014
AcsI	RAATTY	1 cut(s)	617
AcuI	CTGAAG	3 cut(s)	1602, 1725, 2046
AfaI	GTAC	8 cut(s)	137, 529, 1441, 1456, 1573, 1897, 2089, 2542
AfiI	CCNNNNNNNGG	7 cut(s)	125, 160, 524, 607, 1172, 1451, 1873
AflIII	ACRYGT	1 cut(s)	1771
AgeI	ACCGGT	1 cut(s)	256
AhlI	ACTAGT	2 cut(s)	1487, 2507
AjiI	CACGTC	2 cut(s)	331, 2468
AjnI	CCWGG	3 cut(s)	138, 523, 1219
AjuI	GAANNNNNNNTTGG	4 cut(s)	1002, 1034, 2115, 2147
AleI	CACNNNNGTG	1 cut(s)	1478
AloI	GAACNNNNNNTCC	2 cut(s)	504, 536
Alw21I	GWGCWC	4 cut(s)	1293, 1320, 2351, 2473
Alw26I	GTCTC	6 cut(s)	354, 838, 965, 1325, 1564, 2335
AlwI	GGATC	7 cut(s)	275, 674, 1789, 1967, 1976, 2051, 2064
Ama87I	CYCGRG	5 cut(s)	532, 1322, 1567, 2445, 2472
AoxI	GGCC	7 cut(s)	333, 1127, 1377, 1494, 2001, 2014, 2171
ApaI	GGGCCC	1 cut(s)	1381
ApeKI	GCWGC	6 cut(s)	1162, 1787, 2103, 2306, 2317, 2320
ApoI	RAATTY	1 cut(s)	617
ArsI	GACNNNNNNTTYG	2 cut(s)	499, 531
AsiGI	ACCGGT	1 cut(s)	256
Asp700I	GAANNNNTTC	1 cut(s)	2127
Asp718I	GGTACC	1 cut(s)	527
AspS9I	GGNCC	4 cut(s)	334, 598, 1377, 1378
AsuHPI	GGTGA	4 cut(s)	622, 1035, 1264, 1528
AvaI	CYCGRG	5 cut(s)	532, 1322, 1567, 2445, 2472
AvaII	GGWCC	1 cut(s)	598
BaeGI	GKGCMC	1 cut(s)	1381
BaeI	ACNNNNGTAYC	2 cut(s)	2496, 2529
BalI	TGGCCA	2 cut(s)	1129, 2016
BamHI	GGATCC	1 cut(s)	2056
BanI	GGYRCC	2 cut(s)	527, 1876
BanII	GRGCYC	3 cut(s)	420, 1320, 1381
BarI	GAAGNNNNNNTAC	2 cut(s)	2293, 2325
BauI	CACGAG	1 cut(s)	1354
Bbv12I	GWGCWC	4 cut(s)	1293, 1320, 2351, 2473
BbvI	GCAGC	6 cut(s)	1174, 1774, 2115, 2293, 2329, 2332
BccI	CCATC	6 cut(s)	92, 631, 1391, 2068, 2243, 2264
BceAI	ACGGC	3 cut(s)	62, 168, 1433
BciT130I	CCWGG	3 cut(s)	140, 525, 1221
BciVI	GTATCC	2 cut(s)	1477, 2564
BcoDI	GTCTC	6 cut(s)	354, 838, 965, 1325, 1564, 2335
BcuI	ACTAGT	2 cut(s)	1487, 2507
BfmI	CTRYAG	4 cut(s)	688, 1632, 2049, 2325
BfuAI	ACCTGC	1 cut(s)	684
BfuI	GTATCC	2 cut(s)	1477, 2564
BglII	AGATCT	2 cut(s)	356, 949
BisI	GCNGC	6 cut(s)	1163, 1788, 2104, 2307, 2318, 2321
BlpI	GCTNAGC	3 cut(s)	54, 414, 1292
BlsI	GCNGC	6 cut(s)	1164, 1789, 2105, 2308, 2319, 2322
BmcAI	AGTACT	2 cut(s)	1573, 2542
Bme1390I	CCNGG	3 cut(s)	140, 525, 1221
Bme18I	GGWCC	1 cut(s)	598
BmeT110I	CYCGRG	5 cut(s)	532, 1322, 1567, 2445, 2472
BmgBI	CACGTC	2 cut(s)	331, 2468
BmgT120I	GGNCC	4 cut(s)	334, 598, 1377, 1378
BmrFI	CCNGG	3 cut(s)	140, 525, 1221
BmrI	ACTGGG	2 cut(s)	1440, 2102
BmsI	GCATC	7 cut(s)	193, 310, 898, 1726, 1824, 2200, 2472
BmuI	ACTGGG	2 cut(s)	1440, 2102
BpmI	CTGGAG	2 cut(s)	54, 1222
Bpu10I	CCTNAGC	1 cut(s)	2373
Bpu1102I	GCTNAGC	3 cut(s)	54, 414, 1292
BpuEI	CTTGAG	2 cut(s)	848, 1349
BsaI	GGTCTC	2 cut(s)	838, 965
BsaJI	CCNNGG	7 cut(s)	78, 420, 966, 1220, 1800, 2336, 2444
BsaWI	WCCGGW	2 cut(s)	256, 517
Bsc4I	CCNNNNNNNGG	7 cut(s)	125, 160, 524, 607, 1172, 1451, 1873
Bse118I	RCCGGY	1 cut(s)	256
Bse3DI	GCAATG	2 cut(s)	960, 1854
BseBI	CCWGG	3 cut(s)	140, 525, 1221
BseDI	CCNNGG	7 cut(s)	78, 420, 966, 1220, 1800, 2336, 2444
BseLI	CCNNNNNNNGG	7 cut(s)	125, 160, 524, 607, 1172, 1451, 1873
BseMI	GCAATG	2 cut(s)	960, 1854
BseRI	GAGGAG	2 cut(s)	1310, 2112
BseSI	GKGCMC	1 cut(s)	1381
BseXI	GCAGC	6 cut(s)	1174, 1774, 2115, 2293, 2329, 2332
BsgI	GTGCAG	1 cut(s)	1020
Bsh1236I	CGCG	1 cut(s)	2422
BshFI	GGCC	7 cut(s)	335, 1129, 1379, 1496, 2003, 2016, 2173
BshNI	GGYRCC	2 cut(s)	527, 1876
BshTI	ACCGGT	1 cut(s)	256
BsiHKAI	GWGCWC	4 cut(s)	1293, 1320, 2351, 2473
BsiHKCI	CYCGRG	5 cut(s)	532, 1322, 1567, 2445, 2472
BsiSI	CCGG	3 cut(s)	257, 518, 1081
BslFI	GGGAC	2 cut(s)	407, 2169
BslI	CCNNNNNNNGG	7 cut(s)	125, 160, 524, 607, 1172, 1451, 1873
BsmAI	GTCTC	6 cut(s)	354, 838, 965, 1325, 1564, 2335
BsmBI	CGTCTC	1 cut(s)	1564
BsmFI	GGGAC	2 cut(s)	407, 2169
BsmI	GAATGC	4 cut(s)	58, 710, 1198, 2278
BsnI	GGCC	7 cut(s)	335, 1129, 1379, 1496, 2003, 2016, 2173
Bso31I	GGTCTC	2 cut(s)	838, 965
BsoBI	CYCGRG	5 cut(s)	532, 1322, 1567, 2445, 2472
Bsp120I	GGGCCC	1 cut(s)	1377
Bsp1286I	GDGCHC	6 cut(s)	420, 1293, 1320, 1381, 2351, 2473
Bsp1720I	GCTNAGC	3 cut(s)	54, 414, 1292
Bsp19I	CCATGG	2 cut(s)	420, 966
BspACI	CCGC	3 cut(s)	2153, 2370, 2422
BspANI	GGCC	7 cut(s)	335, 1129, 1379, 1496, 2003, 2016, 2173
BspFNI	CGCG	1 cut(s)	2422
BspMAI	CTGCAG	3 cut(s)	1636, 2053, 2329
BspMI	ACCTGC	1 cut(s)	684
BspPI	GGATC	7 cut(s)	275, 674, 1789, 1967, 1976, 2051, 2064
BspQI	GCTCTTC	1 cut(s)	1837
BspT107I	GGYRCC	2 cut(s)	527, 1876
BspTNI	GGTCTC	2 cut(s)	838, 965
BsrDI	GCAATG	2 cut(s)	960, 1854
BsrFI	RCCGGY	1 cut(s)	256
BssAI	RCCGGY	1 cut(s)	256
BssECI	CCNNGG	7 cut(s)	78, 420, 966, 1220, 1800, 2336, 2444
BssSI	CACGAG	1 cut(s)	1354
BssT1I	CCWWGG	3 cut(s)	420, 966, 1800
Bst2BI	CACGAG	1 cut(s)	1354
Bst2UI	CCWGG	3 cut(s)	140, 525, 1221
Bst4CI	ACNGT	5 cut(s)	1424, 1477, 1681, 1900, 2300
Bst6I	CTCTTC	5 cut(s)	126, 801, 1115, 1837, 2420
BstAPI	GCANNNNNTGC	2 cut(s)	1029, 1034
BstC8I	GCNNGC	7 cut(s)	104, 1030, 1140, 1412, 2005, 2325, 2579
BstDSI	CCRYGG	3 cut(s)	78, 420, 966
BstFNI	CGCG	1 cut(s)	2422
BstMAI	GTCTC	6 cut(s)	354, 838, 965, 1325, 1564, 2335
BstMWI	GCNNNNNNNGC	9 cut(s)	405, 1029, 1034, 1135, 1159, 1324, 1962, 2013, 2384
BstNI	CCWGG	3 cut(s)	140, 525, 1221
BstNSI	RCATGY	3 cut(s)	1032, 1512, 1775
BstSCI	CCNGG	3 cut(s)	138, 523, 1219
BstSFI	CTRYAG	4 cut(s)	688, 1632, 2049, 2325
BstSLI	GKGCMC	1 cut(s)	1381
BstUI	CGCG	1 cut(s)	2422
BstV1I	GCAGC	6 cut(s)	1174, 1774, 2115, 2293, 2329, 2332
BstX2I	RGATCY	6 cut(s)	356, 666, 949, 1794, 1981, 2056
BstYI	RGATCY	6 cut(s)	356, 666, 949, 1794, 1981, 2056
BsuI	GTATCC	2 cut(s)	1477, 2564
BsuRI	GGCC	7 cut(s)	335, 1129, 1379, 1496, 2003, 2016, 2173
BtgI	CCRYGG	3 cut(s)	78, 420, 966
BtrI	CACGTC	2 cut(s)	331, 2468
BtsI	GCAGTG	2 cut(s)	930, 2058
BtsIMutI	CAGTG	8 cut(s)	376, 930, 1420, 1473, 2058, 2115, 2363, 2378
BveI	ACCTGC	1 cut(s)	684
Cac8I	GCNNGC	7 cut(s)	104, 1030, 1140, 1412, 2005, 2325, 2579
Cfr10I	RCCGGY	1 cut(s)	256
Cfr13I	GGNCC	4 cut(s)	334, 598, 1377, 1378
CseI	GACGC	1 cut(s)	779
CsiI	ACCWGGT	1 cut(s)	138
Csp6I	GTAC	8 cut(s)	136, 528, 1440, 1455, 1572, 1896, 2088, 2541
CspAI	ACCGGT	1 cut(s)	256
CviQI	GTAC	8 cut(s)	136, 528, 1440, 1455, 1572, 1896, 2088, 2541
DraI	TTTAAA	1 cut(s)	403
DrdI	GACNNNNNNGTC	1 cut(s)	979
DseDI	GACNNNNNNGTC	1 cut(s)	979
EaeI	YGGCCR	2 cut(s)	1127, 2014
Eam1104I	CTCTTC	5 cut(s)	126, 801, 1115, 1837, 2420
EarI	CTCTTC	5 cut(s)	126, 801, 1115, 1837, 2420
Ecl136II	GAGCTC	1 cut(s)	1318
Eco130I	CCWWGG	3 cut(s)	420, 966, 1800
Eco147I	AGGCCT	1 cut(s)	2003
Eco24I	GRGCYC	3 cut(s)	420, 1320, 1381
Eco31I	GGTCTC	2 cut(s)	838, 965
Eco32I	GATATC	1 cut(s)	1623
Eco47I	GGWCC	1 cut(s)	598
Eco53kI	GAGCTC	1 cut(s)	1318
Eco57I	CTGAAG	3 cut(s)	1602, 1725, 2046
Eco88I	CYCGRG	5 cut(s)	532, 1322, 1567, 2445, 2472
EcoICRI	GAGCTC	1 cut(s)	1318
EcoO109I	RGGNCCY	1 cut(s)	598
EcoRII	CCWGG	3 cut(s)	138, 523, 1219
EcoRV	GATATC	1 cut(s)	1623
EcoT14I	CCWWGG	3 cut(s)	420, 966, 1800
EcoT38I	GRGCYC	3 cut(s)	420, 1320, 1381
ErhI	CCWWGG	3 cut(s)	420, 966, 1800
Esp3I	CGTCTC	1 cut(s)	1564
FalI	AAGNNNNNCTT	2 cut(s)	2115, 2147
FaqI	GGGAC	2 cut(s)	407, 2169
FauI	CCCGC	1 cut(s)	2146
Fnu4HI	GCNGC	6 cut(s)	1163, 1788, 2104, 2307, 2318, 2321
FriOI	GRGCYC	3 cut(s)	420, 1320, 1381
Fsp4HI	GCNGC	6 cut(s)	1163, 1788, 2104, 2307, 2318, 2321
GluI	GCNGC	6 cut(s)	1163, 1788, 2104, 2307, 2318, 2321
GsuI	CTGGAG	2 cut(s)	54, 1222
HaeIII	GGCC	7 cut(s)	335, 1129, 1379, 1496, 2003, 2016, 2173
HapII	CCGG	3 cut(s)	257, 518, 1081
HgaI	GACGC	1 cut(s)	779
HincII	GTYRAC	2 cut(s)	328, 2332
HindII	GTYRAC	2 cut(s)	328, 2332
HindIII	AAGCTT	2 cut(s)	1531, 2385
HpaI	GTTAAC	1 cut(s)	2332
HpaII	CCGG	3 cut(s)	257, 518, 1081
HphI	GGTGA	4 cut(s)	622, 1035, 1264, 1528
Hpy166II	GTNNAC	6 cut(s)	328, 632, 1473, 1769, 2332, 2363
Hpy8I	GTNNAC	6 cut(s)	328, 632, 1473, 1769, 2332, 2363
HpyAV	CCTTC	5 cut(s)	8, 589, 845, 1236, 1249
HpyCH4III	ACNGT	5 cut(s)	1424, 1477, 1681, 1900, 2300
HpyCH4IV	ACGT	4 cut(s)	330, 1132, 1918, 2467
HpyF10VI	GCNNNNNNNGC	9 cut(s)	405, 1029, 1034, 1135, 1159, 1324, 1962, 2013, 2384
HpySE526I	ACGT	4 cut(s)	330, 1132, 1918, 2467
KpnI	GGTACC	1 cut(s)	531
KspAI	GTTAAC	1 cut(s)	2332
LguI	GCTCTTC	1 cut(s)	1837
LmnI	GCTCC	5 cut(s)	1323, 1337, 1750, 1804, 1863
Lsp1109I	GCAGC	6 cut(s)	1174, 1774, 2115, 2293, 2329, 2332
LweI	GCATC	7 cut(s)	193, 310, 898, 1726, 1824, 2200, 2472
MabI	ACCWGGT	1 cut(s)	138
MaeII	ACGT	4 cut(s)	330, 1132, 1918, 2467
MaeIII	GTNAC	7 cut(s)	548, 610, 994, 1073, 1262, 1774, 1989
MflI	RGATCY	6 cut(s)	356, 666, 949, 1794, 1981, 2056
MhlI	GDGCHC	6 cut(s)	420, 1293, 1320, 1381, 2351, 2473
MlsI	TGGCCA	2 cut(s)	1129, 2016
MluCI	AATT	6 cut(s)	447, 617, 930, 1825, 2177, 2524
MluNI	TGGCCA	2 cut(s)	1129, 2016
MlyI	GAGTC	4 cut(s)	356, 440, 556, 1268
MmeI	TCCRAC	4 cut(s)	106, 450, 524, 880
Mox20I	TGGCCA	2 cut(s)	1129, 2016
MroXI	GAANNNNTTC	1 cut(s)	2127
MscI	TGGCCA	2 cut(s)	1129, 2016
MseI	TTAA	6 cut(s)	86, 315, 402, 761, 1227, 2331
MslI	CAYNNNNRTG	3 cut(s)	342, 965, 1478
Msp20I	TGGCCA	2 cut(s)	1129, 2016
MspI	CCGG	3 cut(s)	257, 518, 1081
MspR9I	CCNGG	3 cut(s)	140, 525, 1221
Mva1269I	GAATGC	4 cut(s)	58, 710, 1198, 2278
MvaI	CCWGG	3 cut(s)	140, 525, 1221
MvnI	CGCG	1 cut(s)	2422
MwoI	GCNNNNNNNGC	9 cut(s)	405, 1029, 1034, 1135, 1159, 1324, 1962, 2013, 2384
NcoI	CCATGG	2 cut(s)	420, 966
NmuCI	GTSAC	4 cut(s)	548, 610, 1262, 1774
NspI	RCATGY	3 cut(s)	1032, 1512, 1775
OliI	CACNNNNGTG	1 cut(s)	1478
PaeI	GCATGC	1 cut(s)	1032
PaeR7I	CTCGAG	4 cut(s)	532, 1322, 1567, 2472
PaqCI	CACCTGC	1 cut(s)	684
PceI	AGGCCT	1 cut(s)	2003
PciI	ACATGT	1 cut(s)	1771
PciSI	GCTCTTC	1 cut(s)	1837
PcsI	WCGNNNNNNNCGW	3 cut(s)	2187, 2196, 2574
PctI	GAATGC	4 cut(s)	58, 710, 1198, 2278
PdmI	GAANNNNTTC	1 cut(s)	2127
PfeI	GAWTC	6 cut(s)	5, 47, 299, 1577, 1610, 1706
PflMI	CCANNNNNTGG	1 cut(s)	1873
PinAI	ACCGGT	1 cut(s)	256
PkrI	GCNGC	6 cut(s)	1164, 1789, 2105, 2308, 2319, 2322
PleI	GAGTC	4 cut(s)	355, 439, 555, 1268
PpsI	GAGTC	4 cut(s)	355, 439, 555, 1268
PpuMI	RGGWCCY	1 cut(s)	598
PscI	ACATGT	1 cut(s)	1771
PsiI	TTATAA	1 cut(s)	2523
Psp124BI	GAGCTC	1 cut(s)	1320
Psp5II	RGGWCCY	1 cut(s)	598
Psp6I	CCWGG	3 cut(s)	138, 523, 1219
PspGI	CCWGG	3 cut(s)	138, 523, 1219
PspOMI	GGGCCC	1 cut(s)	1377
PspPI	GGNCC	4 cut(s)	334, 598, 1377, 1378
PspPPI	RGGWCCY	1 cut(s)	598
PspXI	VCTCGAGB	4 cut(s)	532, 1322, 1567, 2472
PsrI	GAACNNNNNNTAC	2 cut(s)	1081, 1113
PstI	CTGCAG	3 cut(s)	1636, 2053, 2329
PsuI	RGATCY	6 cut(s)	356, 666, 949, 1794, 1981, 2056
RsaI	GTAC	8 cut(s)	137, 529, 1441, 1456, 1573, 1897, 2089, 2542
RsaNI	GTAC	8 cut(s)	136, 528, 1440, 1455, 1572, 1896, 2088, 2541
RseI	CAYNNNNRTG	3 cut(s)	342, 965, 1478
SacI	GAGCTC	1 cut(s)	1320
SapI	GCTCTTC	1 cut(s)	1837
SaqAI	TTAA	6 cut(s)	86, 315, 402, 761, 1227, 2331
SatI	GCNGC	6 cut(s)	1163, 1788, 2104, 2307, 2318, 2321
Sau96I	GGNCC	4 cut(s)	334, 598, 1377, 1378
ScaI	AGTACT	2 cut(s)	1573, 2542
SchI	GAGTC	4 cut(s)	356, 440, 556, 1268
ScrFI	CCNGG	3 cut(s)	140, 525, 1221
SduI	GDGCHC	6 cut(s)	420, 1293, 1320, 1381, 2351, 2473
SexAI	ACCWGGT	1 cut(s)	138
SfaNI	GCATC	7 cut(s)	193, 310, 898, 1726, 1824, 2200, 2472
SfcI	CTRYAG	4 cut(s)	688, 1632, 2049, 2325
Sfr274I	CTCGAG	4 cut(s)	532, 1322, 1567, 2472
SinI	GGWCC	1 cut(s)	598
SlaI	CTCGAG	4 cut(s)	532, 1322, 1567, 2472
SmiMI	CAYNNNNRTG	3 cut(s)	342, 965, 1478
SmlI	CTYRAG	6 cut(s)	532, 827, 1322, 1328, 1567, 2472
SmoI	CTYRAG	6 cut(s)	532, 827, 1322, 1328, 1567, 2472
SpeI	ACTAGT	2 cut(s)	1487, 2507
SphI	GCATGC	1 cut(s)	1032
Sse9I	AATT	6 cut(s)	447, 617, 930, 1825, 2177, 2524
SseBI	AGGCCT	1 cut(s)	2003
SsiI	CCGC	3 cut(s)	2153, 2370, 2422
SspI	AATATT	1 cut(s)	750
SstI	GAGCTC	1 cut(s)	1320
StuI	AGGCCT	1 cut(s)	2003
StyD4I	CCNGG	3 cut(s)	138, 523, 1219
StyI	CCWWGG	3 cut(s)	420, 966, 1800
TaaI	ACNGT	5 cut(s)	1424, 1477, 1681, 1900, 2300
TaiI	ACGT	4 cut(s)	333, 1135, 1921, 2470
TaqI	TCGA	7 cut(s)	30, 533, 1323, 1542, 1568, 2181, 2473
TasI	AATT	6 cut(s)	447, 617, 930, 1825, 2177, 2524
TatI	WGTACW	3 cut(s)	1571, 2087, 2540
TfiI	GAWTC	6 cut(s)	5, 47, 299, 1577, 1610, 1706
Tru1I	TTAA	6 cut(s)	86, 315, 402, 761, 1227, 2331
Tru9I	TTAA	6 cut(s)	86, 315, 402, 761, 1227, 2331
TscAI	CASTG	8 cut(s)	376, 930, 1427, 1480, 2058, 2115, 2370, 2385
TseFI	GTSAC	4 cut(s)	548, 610, 1262, 1774
TseI	GCWGC	6 cut(s)	1162, 1787, 2103, 2306, 2317, 2320
Tsp45I	GTSAC	4 cut(s)	548, 610, 1262, 1774
TspGWI	ACGGA	2 cut(s)	1546, 2583
TspRI	CASTG	8 cut(s)	376, 930, 1427, 1480, 2058, 2115, 2370, 2385
Van91I	CCANNNNNTGG	1 cut(s)	1873
VpaK11BI	GGWCC	1 cut(s)	598
XapI	RAATTY	1 cut(s)	617
XbaI	TCTAGA	4 cut(s)	187, 893, 2093, 2206
XceI	RCATGY	3 cut(s)	1032, 1512, 1775
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1201, 1246
XhoI	CTCGAG	4 cut(s)	532, 1322, 1567, 2472
XmnI	GAANNNNTTC	1 cut(s)	2127
ZrmI	AGTACT	2 cut(s)	1573, 2542

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.