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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g25060 FvH4_4g25060 FvH4_4g25060 FvH4_4g25060 |
| malus_domestica | MD13G1106900.v1.1 MD16G1107000.v1.1 |
| prunus_persica | Prupe.1G239400_v2.0.a1 Prupe.1G239400_v2.0.a1 |
| pyrus_communis | pycom13g09270 pycom16g09110 |
| rosa_chinensis | RchiOBHm_Chr4g0432241 |
| rosa_laevigata | RLG00000006860 |
| rosa_multiflora | Rmu_co7961612.1_g000001 Rmu_sc0001084.1_g000049 Rmu_sc0039253.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00373690 |
| rosa_rugosa | Rorug04G0255400 Rorug04G0255500 |
| rosa_samantha | Rh4AG312600 Rh4BG320100 Rh4CG335300 Rh4DG315500 |
| rosa_wichuraiana | Rw4G027170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 36 |
| Acc65I | GGTACC | 1 cut(s) | 412 |
| AccB1I | GGYRCC | 3 cut(s) | 412, 2545, 3197 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 785, 2215 |
| AccI | GTMKAC | 4 cut(s) | 243, 450, 2423, 3381 |
| AccII | CGCG | 1 cut(s) | 808 |
| AciI | CCGC | 8 cut(s) | 21, 354, 808, 2650, 2657, 2765, 3309, 3402 |
| AclWI | GGATC | 5 cut(s) | 2243, 2256, 2691, 2779, 3277 |
| AcoI | YGGCCR | 1 cut(s) | 72 |
| AcsI | RAATTY | 8 cut(s) | 159, 297, 330, 1525, 2407, 2881, 3370, 3443 |
| AcuI | CTGAAG | 6 cut(s) | 900, 1005, 1671, 2616, 2757, 3189 |
| AcyI | GRCGYC | 2 cut(s) | 33, 240 |
| AfaI | GTAC | 8 cut(s) | 414, 822, 1342, 1968, 1977, 2161, 2589, 3152 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 785, 2215, 2500, 2656, 2841, 3285 |
| AjnI | CCWGG | 4 cut(s) | 1394, 2244, 2439, 3432 |
| AloI | GAACNNNNNNTCC | 3 cut(s) | 34, 3148, 3180 |
| Alw21I | GWGCWC | 2 cut(s) | 20, 3128 |
| Alw26I | GTCTC | 5 cut(s) | 88, 545, 743, 2396, 2472 |
| AlwI | GGATC | 5 cut(s) | 2243, 2256, 2691, 2779, 3277 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 947 |
| Ama87I | CYCGRG | 2 cut(s) | 13, 2807 |
| AoxI | GGCC | 4 cut(s) | 72, 2931, 3141, 3390 |
| ApeKI | GCWGC | 4 cut(s) | 591, 678, 1457, 2673 |
| ApoI | RAATTY | 8 cut(s) | 159, 297, 330, 1525, 2407, 2881, 3370, 3443 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 2374, 2399, 2406, 2431 |
| AseI | ATTAAT | 1 cut(s) | 1515 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 697, 1711, 1725, 2817, 3073, 3447 |
| Asp718I | GGTACC | 1 cut(s) | 412 |
| AspLEI | GCGC | 6 cut(s) | 683, 1089, 1215, 1443, 1586, 2910 |
| AspS9I | GGNCC | 4 cut(s) | 178, 1565, 2931, 3142 |
| AsuII | TTCGAA | 1 cut(s) | 147 |
| AsuNHI | GCTAGC | 1 cut(s) | 2741 |
| AvaI | CYCGRG | 2 cut(s) | 13, 2807 |
| AvaII | GGWCC | 2 cut(s) | 178, 1565 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 861, 894 |
| BalI | TGGCCA | 1 cut(s) | 74 |
| BamHI | GGATCC | 1 cut(s) | 2248 |
| BanI | GGYRCC | 3 cut(s) | 412, 2545, 3197 |
| BanII | GRGCYC | 2 cut(s) | 20, 3128 |
| BauI | CACGAG | 1 cut(s) | 52 |
| BbsI | GAAGAC | 3 cut(s) | 837, 1895, 3432 |
| Bbv12I | GWGCWC | 2 cut(s) | 20, 3128 |
| BbvCI | CCTCAGC | 1 cut(s) | 2802 |
| BbvI | GCAGC | 4 cut(s) | 603, 690, 1469, 2660 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1420, 1454, 1592, 1626 |
| BciT130I | CCWGG | 4 cut(s) | 1396, 2246, 2441, 3434 |
| BciVI | GTATCC | 3 cut(s) | 1012, 1834, 2053 |
| BclI | TGATCA | 2 cut(s) | 1248, 2332 |
| BcoDI | GTCTC | 5 cut(s) | 88, 545, 743, 2396, 2472 |
| BfmI | CTRYAG | 3 cut(s) | 894, 1323, 1506 |
| BfuI | GTATCC | 3 cut(s) | 1012, 1834, 2053 |
| BglII | AGATCT | 2 cut(s) | 1490, 2203 |
| BisI | GCNGC | 5 cut(s) | 592, 679, 1458, 2674, 3402 |
| BlpI | GCTNAGC | 2 cut(s) | 732, 3127 |
| BlsI | GCNGC | 5 cut(s) | 593, 680, 1459, 2675, 3403 |
| BmcAI | AGTACT | 1 cut(s) | 1342 |
| Bme1390I | CCNGG | 4 cut(s) | 1396, 2246, 2441, 3434 |
| Bme18I | GGWCC | 2 cut(s) | 178, 1565 |
| BmeT110I | CYCGRG | 2 cut(s) | 13, 2807 |
| BmgT120I | GGNCC | 4 cut(s) | 178, 1565, 2931, 3142 |
| BmiI | GGNNCC | 9 cut(s) | 190, 310, 414, 2250, 2547, 2932, 3144, 3199, 3438 |
| BmrFI | CCNGG | 4 cut(s) | 1396, 2246, 2441, 3434 |
| BmrI | ACTGGG | 1 cut(s) | 2850 |
| BmtI | GCTAGC | 1 cut(s) | 2745 |
| BmuI | ACTGGG | 1 cut(s) | 2850 |
| BpiI | GAAGAC | 3 cut(s) | 837, 1895, 3432 |
| BpmI | CTGGAG | 4 cut(s) | 762, 810, 2127, 2192 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2802 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 732, 3127 |
| Bpu14I | TTCGAA | 1 cut(s) | 147 |
| BpuEI | CTTGAG | 1 cut(s) | 2684 |
| BsaBI | GATNNNNATC | 2 cut(s) | 506, 2776 |
| BsaHI | GRCGYC | 2 cut(s) | 33, 240 |
| BsaJI | CCNNGG | 7 cut(s) | 24, 1395, 1893, 2439, 2716, 2808, 2892 |
| BsaWI | WCCGGW | 2 cut(s) | 180, 1660 |
| BsaXI | ACNNNNNCTCC | 5 cut(s) | 32, 1527, 1557, 3295, 3325 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 785, 2215, 2500, 2656, 2841, 3285 |
| Bse118I | RCCGGY | 1 cut(s) | 3334 |
| Bse1I | ACTGG | 3 cut(s) | 779, 2845, 3020 |
| Bse3DI | GCAATG | 6 cut(s) | 416, 529, 1776, 2113, 2454, 3268 |
| Bse8I | GATNNNNATC | 2 cut(s) | 506, 2776 |
| BseBI | CCWGG | 4 cut(s) | 1396, 2246, 2441, 3434 |
| BseDI | CCNNGG | 7 cut(s) | 24, 1395, 1893, 2439, 2716, 2808, 2892 |
| BseGI | GGATG | 4 cut(s) | 34, 133, 1669, 2469 |
| BseJI | GATNNNNATC | 2 cut(s) | 506, 2776 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 785, 2215, 2500, 2656, 2841, 3285 |
| BseMI | GCAATG | 6 cut(s) | 416, 529, 1776, 2113, 2454, 3268 |
| BseMII | CTCAG | 9 cut(s) | 1079, 1943, 2042, 2268, 2409, 2816, 3138, 3141, 3261 |
| BseNI | ACTGG | 3 cut(s) | 779, 2845, 3020 |
| BseRI | GAGGAG | 2 cut(s) | 2027, 2513 |
| BseXI | GCAGC | 4 cut(s) | 603, 690, 1469, 2660 |
| BseYI | CCCAGC | 1 cut(s) | 2459 |
| BsgI | GTGCAG | 2 cut(s) | 1476, 1929 |
| Bsh1236I | CGCG | 1 cut(s) | 808 |
| BshFI | GGCC | 4 cut(s) | 74, 2933, 3143, 3392 |
| BshNI | GGYRCC | 3 cut(s) | 412, 2545, 3197 |
| BsiHKAI | GWGCWC | 2 cut(s) | 20, 3128 |
| BsiHKCI | CYCGRG | 2 cut(s) | 13, 2807 |
| BsiSI | CCGG | 4 cut(s) | 87, 181, 1661, 3335 |
| BslFI | GGGAC | 1 cut(s) | 2857 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 785, 2215, 2500, 2656, 2841, 3285 |
| BsmAI | GTCTC | 5 cut(s) | 88, 545, 743, 2396, 2472 |
| BsmBI | CGTCTC | 1 cut(s) | 88 |
| BsmFI | GGGAC | 1 cut(s) | 2857 |
| BsmI | GAATGC | 2 cut(s) | 514, 733 |
| BsnI | GGCC | 4 cut(s) | 74, 2933, 3143, 3392 |
| BsoBI | CYCGRG | 2 cut(s) | 13, 2807 |
| Bsp119I | TTCGAA | 1 cut(s) | 147 |
| Bsp1286I | GDGCHC | 2 cut(s) | 20, 3128 |
| Bsp1407I | TGTACA | 2 cut(s) | 1966, 1975 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 732, 3127 |
| BspACI | CCGC | 8 cut(s) | 21, 354, 808, 2650, 2657, 2765, 3309, 3402 |
| BspANI | GGCC | 4 cut(s) | 74, 2933, 3143, 3392 |
| BspCNI | CTCAG | 9 cut(s) | 1078, 1942, 2041, 2269, 2410, 2815, 3139, 3140, 3260 |
| BspFNI | CGCG | 1 cut(s) | 808 |
| BspHI | TCATGA | 1 cut(s) | 1957 |
| BspLI | GGNNCC | 9 cut(s) | 190, 310, 414, 2250, 2547, 2932, 3144, 3199, 3438 |
| BspMAI | CTGCAG | 2 cut(s) | 1327, 1510 |
| BspOI | GCTAGC | 1 cut(s) | 2745 |
| BspPI | GGATC | 5 cut(s) | 2243, 2256, 2691, 2779, 3277 |
| BspT104I | TTCGAA | 1 cut(s) | 147 |
| BspT107I | GGYRCC | 3 cut(s) | 412, 2545, 3197 |
| BsrDI | GCAATG | 6 cut(s) | 416, 529, 1776, 2113, 2454, 3268 |
| BsrFI | RCCGGY | 1 cut(s) | 3334 |
| BsrGI | TGTACA | 2 cut(s) | 1966, 1975 |
| BsrI | ACTGG | 3 cut(s) | 779, 2845, 3020 |
| BssAI | RCCGGY | 1 cut(s) | 3334 |
| BssECI | CCNNGG | 7 cut(s) | 24, 1395, 1893, 2439, 2716, 2808, 2892 |
| BssNI | GRCGYC | 2 cut(s) | 33, 240 |
| BssSI | CACGAG | 1 cut(s) | 52 |
| BssT1I | CCWWGG | 3 cut(s) | 1893, 2716, 2892 |
| Bst2BI | CACGAG | 1 cut(s) | 52 |
| Bst2UI | CCWGG | 4 cut(s) | 1396, 2246, 2441, 3434 |
| Bst6I | CTCTTC | 7 cut(s) | 281, 741, 1479, 1730, 2220, 2514, 2592 |
| BstACI | GRCGYC | 2 cut(s) | 33, 240 |
| BstAUI | TGTACA | 2 cut(s) | 1966, 1975 |
| BstBI | TTCGAA | 1 cut(s) | 147 |
| BstC8I | GCNNGC | 7 cut(s) | 2290, 2313, 2369, 2401, 2743, 3202, 3465 |
| BstF5I | GGATG | 4 cut(s) | 34, 133, 1669, 2469 |
| BstFNI | CGCG | 1 cut(s) | 808 |
| BstHHI | GCGC | 6 cut(s) | 683, 1089, 1215, 1443, 1586, 2910 |
| BstMAI | GTCTC | 5 cut(s) | 88, 545, 743, 2396, 2472 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 1970, 2751, 3114, 3123, 3398 |
| BstNI | CCWGG | 4 cut(s) | 1396, 2246, 2441, 3434 |
| BstNSI | RCATGY | 1 cut(s) | 1973 |
| BstSCI | CCNGG | 4 cut(s) | 1394, 2244, 2439, 3432 |
| BstSFI | CTRYAG | 3 cut(s) | 894, 1323, 1506 |
| BstUI | CGCG | 1 cut(s) | 808 |
| BstV1I | GCAGC | 4 cut(s) | 603, 690, 1469, 2660 |
| BstV2I | GAAGAC | 3 cut(s) | 837, 1895, 3432 |
| BstX2I | RGATCY | 5 cut(s) | 1490, 2203, 2248, 2683, 3269 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 320, 1451, 2723 |
| BstYI | RGATCY | 5 cut(s) | 1490, 2203, 2248, 2683, 3269 |
| BsuI | GTATCC | 3 cut(s) | 1012, 1834, 2053 |
| BsuRI | GGCC | 4 cut(s) | 74, 2933, 3143, 3392 |
| BtsCI | GGATG | 4 cut(s) | 34, 133, 1669, 2469 |
| BtsI | GCAGTG | 2 cut(s) | 1030, 3070 |
| BtsIMutI | CAGTG | 9 cut(s) | 36, 241, 403, 1002, 1030, 1480, 1937, 1999, 3070 |
| Cac8I | GCNNGC | 7 cut(s) | 2290, 2313, 2369, 2401, 2743, 3202, 3465 |
| CaiI | CAGNNNCTG | 1 cut(s) | 947 |
| CciI | TCATGA | 1 cut(s) | 1957 |
| CfoI | GCGC | 6 cut(s) | 683, 1089, 1215, 1443, 1586, 2910 |
| Cfr10I | RCCGGY | 1 cut(s) | 3334 |
| Cfr13I | GGNCC | 4 cut(s) | 178, 1565, 2931, 3142 |
| CseI | GACGC | 2 cut(s) | 229, 3367 |
| Csp6I | GTAC | 8 cut(s) | 413, 821, 1341, 1967, 1976, 2160, 2588, 3151 |
| CviQI | GTAC | 8 cut(s) | 413, 821, 1341, 1967, 1976, 2160, 2588, 3151 |
| DraI | TTTAAA | 1 cut(s) | 489 |
| EaeI | YGGCCR | 1 cut(s) | 72 |
| Eam1104I | CTCTTC | 7 cut(s) | 281, 741, 1479, 1730, 2220, 2514, 2592 |
| EarI | CTCTTC | 7 cut(s) | 281, 741, 1479, 1730, 2220, 2514, 2592 |
| EciI | GGCGGA | 1 cut(s) | 10 |
| Ecl136II | GAGCTC | 2 cut(s) | 18, 3126 |
| Eco130I | CCWWGG | 3 cut(s) | 1893, 2716, 2892 |
| Eco24I | GRGCYC | 2 cut(s) | 20, 3128 |
| Eco47I | GGWCC | 2 cut(s) | 178, 1565 |
| Eco53kI | GAGCTC | 2 cut(s) | 18, 3126 |
| Eco57I | CTGAAG | 6 cut(s) | 900, 1005, 1671, 2616, 2757, 3189 |
| Eco88I | CYCGRG | 2 cut(s) | 13, 2807 |
| EcoICRI | GAGCTC | 2 cut(s) | 18, 3126 |
| EcoRII | CCWGG | 4 cut(s) | 1394, 2244, 2439, 3432 |
| EcoT14I | CCWWGG | 3 cut(s) | 1893, 2716, 2892 |
| EcoT22I | ATGCAT | 1 cut(s) | 2869 |
| EcoT38I | GRGCYC | 2 cut(s) | 20, 3128 |
| ErhI | CCWWGG | 3 cut(s) | 1893, 2716, 2892 |
| Esp3I | CGTCTC | 1 cut(s) | 88 |
| FaqI | GGGAC | 1 cut(s) | 2857 |
| FauI | CCCGC | 1 cut(s) | 347 |
| FbaI | TGATCA | 2 cut(s) | 1248, 2332 |
| FblI | GTMKAC | 4 cut(s) | 243, 450, 2423, 3381 |
| Fnu4HI | GCNGC | 5 cut(s) | 592, 679, 1458, 2674, 3402 |
| FokI | GGATG | 4 cut(s) | 41, 120, 1656, 2476 |
| FriOI | GRGCYC | 2 cut(s) | 20, 3128 |
| Fsp4HI | GCNGC | 5 cut(s) | 592, 679, 1458, 2674, 3402 |
| GlaI | GCGC | 6 cut(s) | 682, 1088, 1214, 1442, 1585, 2909 |
| GluI | GCNGC | 5 cut(s) | 592, 679, 1458, 2674, 3402 |
| GsaI | CCCAGC | 1 cut(s) | 2463 |
| GsuI | CTGGAG | 4 cut(s) | 762, 810, 2127, 2192 |
| HaeIII | GGCC | 4 cut(s) | 74, 2933, 3143, 3392 |
| HapII | CCGG | 4 cut(s) | 87, 181, 1661, 3335 |
| HgaI | GACGC | 2 cut(s) | 229, 3367 |
| HhaI | GCGC | 6 cut(s) | 683, 1089, 1215, 1443, 1586, 2910 |
| Hin1I | GRCGYC | 2 cut(s) | 33, 240 |
| Hin6I | GCGC | 6 cut(s) | 681, 1087, 1213, 1441, 1584, 2908 |
| HinP1I | GCGC | 6 cut(s) | 681, 1087, 1213, 1441, 1584, 2908 |
| HincII | GTYRAC | 2 cut(s) | 244, 1383 |
| HindII | GTYRAC | 2 cut(s) | 244, 1383 |
| HindIII | AAGCTT | 2 cut(s) | 696, 3072 |
| HpaII | CCGG | 4 cut(s) | 87, 181, 1661, 3335 |
| Hpy99I | CGWCG | 1 cut(s) | 245 |
| HpyAV | CCTTC | 9 cut(s) | 166, 714, 1564, 1658, 2445, 2507, 3164, 3336, 3382 |
| HpyCH4IV | ACGT | 1 cut(s) | 33 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 1970, 2751, 3114, 3123, 3398 |
| HpySE526I | ACGT | 1 cut(s) | 33 |
| Hsp92I | GRCGYC | 2 cut(s) | 33, 240 |
| HspAI | GCGC | 6 cut(s) | 681, 1087, 1213, 1441, 1584, 2908 |
| KpnI | GGTACC | 1 cut(s) | 416 |
| Ksp22I | TGATCA | 2 cut(s) | 1248, 2332 |
| LmnI | GCTCC | 5 cut(s) | 23, 1465, 1696, 2759, 3442 |
| Lsp1109I | GCAGC | 4 cut(s) | 603, 690, 1469, 2660 |
| MaeII | ACGT | 1 cut(s) | 33 |
| MaeIII | GTNAC | 6 cut(s) | 34, 1228, 1822, 1855, 2240, 2602 |
| MflI | RGATCY | 5 cut(s) | 1490, 2203, 2248, 2683, 3269 |
| MhlI | GDGCHC | 2 cut(s) | 20, 3128 |
| MlsI | TGGCCA | 1 cut(s) | 74 |
| MluNI | TGGCCA | 1 cut(s) | 74 |
| MlyI | GAGTC | 4 cut(s) | 827, 1754, 2429, 3055 |
| MmeI | TCCRAC | 2 cut(s) | 129, 2196 |
| Mox20I | TGGCCA | 1 cut(s) | 74 |
| Mph1103I | ATGCAT | 1 cut(s) | 2869 |
| MroXI | GAANNNNTTC | 6 cut(s) | 697, 1711, 1725, 2817, 3073, 3447 |
| MscI | TGGCCA | 1 cut(s) | 74 |
| MseI | TTAA | 7 cut(s) | 222, 372, 488, 1515, 1638, 2526, 3024 |
| MslI | CAYNNNNRTG | 1 cut(s) | 519 |
| Msp20I | TGGCCA | 1 cut(s) | 74 |
| MspA1I | CMGCKG | 1 cut(s) | 1718 |
| MspI | CCGG | 4 cut(s) | 87, 181, 1661, 3335 |
| MspR9I | CCNGG | 4 cut(s) | 1396, 2246, 2441, 3434 |
| Mva1269I | GAATGC | 2 cut(s) | 514, 733 |
| MvaI | CCWGG | 4 cut(s) | 1396, 2246, 2441, 3434 |
| MvnI | CGCG | 1 cut(s) | 808 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 1970, 2751, 3114, 3123, 3398 |
| NheI | GCTAGC | 1 cut(s) | 2741 |
| NlaIV | GGNNCC | 9 cut(s) | 190, 310, 414, 2250, 2547, 2932, 3144, 3199, 3438 |
| NmuCI | GTSAC | 5 cut(s) | 34, 1822, 1855, 2240, 2602 |
| NsiI | ATGCAT | 1 cut(s) | 2869 |
| NspI | RCATGY | 1 cut(s) | 1973 |
| NspV | TTCGAA | 1 cut(s) | 147 |
| PagI | TCATGA | 1 cut(s) | 1957 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3128 |
| PctI | GAATGC | 2 cut(s) | 514, 733 |
| PdmI | GAANNNNTTC | 6 cut(s) | 697, 1711, 1725, 2817, 3073, 3447 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 785, 2215 |
| PkrI | GCNGC | 5 cut(s) | 593, 680, 1459, 2675, 3403 |
| PleI | GAGTC | 4 cut(s) | 827, 1754, 2428, 3054 |
| PpsI | GAGTC | 4 cut(s) | 827, 1754, 2428, 3054 |
| PshBI | ATTAAT | 1 cut(s) | 1515 |
| Psp124BI | GAGCTC | 2 cut(s) | 20, 3128 |
| Psp6I | CCWGG | 4 cut(s) | 1394, 2244, 2439, 3432 |
| PspFI | CCCAGC | 1 cut(s) | 2459 |
| PspGI | CCWGG | 4 cut(s) | 1394, 2244, 2439, 3432 |
| PspN4I | GGNNCC | 9 cut(s) | 190, 310, 414, 2250, 2547, 2932, 3144, 3199, 3438 |
| PspPI | GGNCC | 4 cut(s) | 178, 1565, 2931, 3142 |
| PstI | CTGCAG | 2 cut(s) | 1327, 1510 |
| PstNI | CAGNNNCTG | 1 cut(s) | 947 |
| PsuI | RGATCY | 5 cut(s) | 1490, 2203, 2248, 2683, 3269 |
| PvuII | CAGCTG | 1 cut(s) | 1718 |
| RsaI | GTAC | 8 cut(s) | 414, 822, 1342, 1968, 1977, 2161, 2589, 3152 |
| RsaNI | GTAC | 8 cut(s) | 413, 821, 1341, 1967, 1976, 2160, 2588, 3151 |
| RseI | CAYNNNNRTG | 1 cut(s) | 519 |
| SacI | GAGCTC | 2 cut(s) | 20, 3128 |
| SalI | GTCGAC | 1 cut(s) | 242 |
| SaqAI | TTAA | 7 cut(s) | 222, 372, 488, 1515, 1638, 2526, 3024 |
| SatI | GCNGC | 5 cut(s) | 592, 679, 1458, 2674, 3402 |
| Sau96I | GGNCC | 4 cut(s) | 178, 1565, 2931, 3142 |
| ScaI | AGTACT | 1 cut(s) | 1342 |
| SchI | GAGTC | 4 cut(s) | 827, 1754, 2429, 3055 |
| ScrFI | CCNGG | 4 cut(s) | 1396, 2246, 2441, 3434 |
| SduI | GDGCHC | 2 cut(s) | 20, 3128 |
| SfcI | CTRYAG | 3 cut(s) | 894, 1323, 1506 |
| SfuI | TTCGAA | 1 cut(s) | 147 |
| SinI | GGWCC | 2 cut(s) | 178, 1565 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 519 |
| SmlI | CTYRAG | 1 cut(s) | 2699 |
| SmoI | CTYRAG | 1 cut(s) | 2699 |
| SsiI | CCGC | 8 cut(s) | 21, 354, 808, 2650, 2657, 2765, 3309, 3402 |
| SspI | AATATT | 1 cut(s) | 445 |
| SstI | GAGCTC | 2 cut(s) | 20, 3128 |
| StyD4I | CCNGG | 4 cut(s) | 1394, 2244, 2439, 3432 |
| StyI | CCWWGG | 3 cut(s) | 1893, 2716, 2892 |
| TaiI | ACGT | 1 cut(s) | 36 |
| TaqI | TCGA | 5 cut(s) | 147, 163, 243, 1430, 3420 |
| TatI | WGTACW | 6 cut(s) | 1340, 1966, 1975, 2159, 2587, 3150 |
| TauI | GCSGC | 1 cut(s) | 3404 |
| Tru1I | TTAA | 7 cut(s) | 222, 372, 488, 1515, 1638, 2526, 3024 |
| Tru9I | TTAA | 7 cut(s) | 222, 372, 488, 1515, 1638, 2526, 3024 |
| TscAI | CASTG | 9 cut(s) | 43, 241, 403, 1009, 1037, 1480, 1937, 1999, 3070 |
| TseFI | GTSAC | 5 cut(s) | 34, 1822, 1855, 2240, 2602 |
| TseI | GCWGC | 4 cut(s) | 591, 678, 1457, 2673 |
| Tsp45I | GTSAC | 5 cut(s) | 34, 1822, 1855, 2240, 2602 |
| TspDTI | ATGAA | 9 cut(s) | 531, 944, 1863, 1932, 1974, 2401, 2522, 2580, 2973 |
| TspGWI | ACGGA | 1 cut(s) | 126 |
| TspRI | CASTG | 9 cut(s) | 43, 241, 403, 1009, 1037, 1480, 1937, 1999, 3070 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 785, 2215 |
| VpaK11BI | GGWCC | 2 cut(s) | 178, 1565 |
| VspI | ATTAAT | 1 cut(s) | 1515 |
| XapI | RAATTY | 8 cut(s) | 159, 297, 330, 1525, 2407, 2881, 3370, 3443 |
| XceI | RCATGY | 1 cut(s) | 1973 |
| XmiI | GTMKAC | 4 cut(s) | 243, 450, 2423, 3381 |
| XmnI | GAANNNNTTC | 6 cut(s) | 697, 1711, 1725, 2817, 3073, 3447 |
| ZraI | GACGTC | 1 cut(s) | 34 |
| ZrmI | AGTACT | 1 cut(s) | 1342 |
| Zsp2I | ATGCAT | 1 cut(s) | 2869 |