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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g25060 FvH4_4g25060 FvH4_4g25060 FvH4_4g25060 |
| malus_domestica | MD13G1106900.v1.1 MD16G1107000.v1.1 |
| prunus_persica | Prupe.1G239400_v2.0.a1 Prupe.1G239400_v2.0.a1 |
| pyrus_communis | pycom13g09270 pycom16g09110 |
| rosa_chinensis | RchiOBHm_Chr4g0432241 |
| rosa_laevigata | RLG00000006860 |
| rosa_multiflora | Rmu_co7961612.1_g000001 Rmu_sc0001084.1_g000049 Rmu_sc0039253.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00373690 |
| rosa_rugosa | Rorug04G0255400 Rorug04G0255500 |
| rosa_samantha | Rh4AG312600 Rh4BG320100 Rh4CG335300 Rh4DG315500 |
| rosa_wichuraiana | Rw4G027170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 325 |
| AccB1I | GGYRCC | 3 cut(s) | 325, 2665, 3317 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 698, 2335 |
| AccI | GTMKAC | 4 cut(s) | 156, 363, 2543, 3501 |
| AccII | CGCG | 1 cut(s) | 721 |
| AciI | CCGC | 8 cut(s) | 267, 497, 721, 2770, 2777, 2885, 3429, 3522 |
| AclWI | GGATC | 6 cut(s) | 507, 2363, 2376, 2811, 2899, 3397 |
| AcsI | RAATTY | 8 cut(s) | 72, 210, 243, 1438, 2527, 3001, 3490, 3563 |
| AcuI | CTGAAG | 6 cut(s) | 813, 918, 1572, 2736, 2877, 3309 |
| AcyI | GRCGYC | 1 cut(s) | 153 |
| AfaI | GTAC | 8 cut(s) | 327, 735, 1255, 1869, 2097, 2281, 2709, 3272 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 698, 2335, 2620, 2776, 2961, 3405 |
| AgeI | ACCGGT | 1 cut(s) | 2033 |
| AjnI | CCWGG | 4 cut(s) | 1307, 2364, 2559, 3552 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3268, 3300 |
| Alw21I | GWGCWC | 1 cut(s) | 3248 |
| Alw26I | GTCTC | 4 cut(s) | 458, 656, 2516, 2592 |
| AlwI | GGATC | 6 cut(s) | 507, 2363, 2376, 2811, 2899, 3397 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 860 |
| Ama87I | CYCGRG | 1 cut(s) | 2927 |
| AoxI | GGCC | 3 cut(s) | 3051, 3261, 3510 |
| ApeKI | GCWGC | 4 cut(s) | 504, 591, 1370, 2793 |
| ApoI | RAATTY | 8 cut(s) | 72, 210, 243, 1438, 2527, 3001, 3490, 3563 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 2494, 2519, 2526, 2551 |
| AseI | ATTAAT | 1 cut(s) | 1428 |
| AsiGI | ACCGGT | 1 cut(s) | 2033 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 610, 1612, 1626, 2937, 3193, 3567 |
| Asp718I | GGTACC | 1 cut(s) | 325 |
| AspLEI | GCGC | 6 cut(s) | 596, 1002, 1128, 1356, 1499, 3030 |
| AspS9I | GGNCC | 4 cut(s) | 91, 1478, 3051, 3262 |
| AsuII | TTCGAA | 1 cut(s) | 60 |
| AsuNHI | GCTAGC | 1 cut(s) | 2861 |
| AvaI | CYCGRG | 1 cut(s) | 2927 |
| AvaII | GGWCC | 2 cut(s) | 91, 1478 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 774, 807 |
| BamHI | GGATCC | 1 cut(s) | 2368 |
| BanI | GGYRCC | 3 cut(s) | 325, 2665, 3317 |
| BanII | GRGCYC | 1 cut(s) | 3248 |
| BbsI | GAAGAC | 4 cut(s) | 750, 1796, 2024, 3552 |
| Bbv12I | GWGCWC | 1 cut(s) | 3248 |
| BbvCI | CCTCAGC | 1 cut(s) | 2922 |
| BbvI | GCAGC | 4 cut(s) | 516, 603, 1382, 2780 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1333, 1367, 1505, 1539 |
| BciT130I | CCWGG | 4 cut(s) | 1309, 2366, 2561, 3554 |
| BciVI | GTATCC | 4 cut(s) | 925, 1735, 1945, 2173 |
| BclI | TGATCA | 2 cut(s) | 1161, 2452 |
| BcoDI | GTCTC | 4 cut(s) | 458, 656, 2516, 2592 |
| BfmI | CTRYAG | 3 cut(s) | 807, 1236, 1419 |
| BfuI | GTATCC | 4 cut(s) | 925, 1735, 1945, 2173 |
| BglII | AGATCT | 2 cut(s) | 1403, 2323 |
| BisI | GCNGC | 5 cut(s) | 505, 592, 1371, 2794, 3522 |
| BlpI | GCTNAGC | 2 cut(s) | 645, 3247 |
| BlsI | GCNGC | 5 cut(s) | 506, 593, 1372, 2795, 3523 |
| BmcAI | AGTACT | 1 cut(s) | 1255 |
| Bme1390I | CCNGG | 4 cut(s) | 1309, 2366, 2561, 3554 |
| Bme18I | GGWCC | 2 cut(s) | 91, 1478 |
| BmeT110I | CYCGRG | 1 cut(s) | 2927 |
| BmgT120I | GGNCC | 4 cut(s) | 91, 1478, 3051, 3262 |
| BmrFI | CCNGG | 4 cut(s) | 1309, 2366, 2561, 3554 |
| BmrI | ACTGGG | 1 cut(s) | 2970 |
| BmtI | GCTAGC | 1 cut(s) | 2865 |
| BmuI | ACTGGG | 1 cut(s) | 2970 |
| BpiI | GAAGAC | 4 cut(s) | 750, 1796, 2024, 3552 |
| BpmI | CTGGAG | 4 cut(s) | 675, 723, 2247, 2312 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2922 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 645, 3247 |
| Bpu14I | TTCGAA | 1 cut(s) | 60 |
| BpuEI | CTTGAG | 1 cut(s) | 2804 |
| BsaBI | GATNNNNATC | 2 cut(s) | 419, 2896 |
| BsaHI | GRCGYC | 1 cut(s) | 153 |
| BsaJI | CCNNGG | 7 cut(s) | 1308, 1794, 2022, 2559, 2836, 2928, 3012 |
| BsaWI | WCCGGW | 3 cut(s) | 93, 1561, 2033 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1440, 1470, 3415, 3445 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 698, 2335, 2620, 2776, 2961, 3405 |
| Bse118I | RCCGGY | 2 cut(s) | 2033, 3454 |
| Bse1I | ACTGG | 3 cut(s) | 692, 2965, 3140 |
| Bse3DI | GCAATG | 6 cut(s) | 329, 442, 1677, 2233, 2574, 3388 |
| Bse8I | GATNNNNATC | 2 cut(s) | 419, 2896 |
| BseBI | CCWGG | 4 cut(s) | 1309, 2366, 2561, 3554 |
| BseDI | CCNNGG | 7 cut(s) | 1308, 1794, 2022, 2559, 2836, 2928, 3012 |
| BseGI | GGATG | 3 cut(s) | 46, 1570, 2589 |
| BseJI | GATNNNNATC | 2 cut(s) | 419, 2896 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 698, 2335, 2620, 2776, 2961, 3405 |
| BseMI | GCAATG | 6 cut(s) | 329, 442, 1677, 2233, 2574, 3388 |
| BseNI | ACTGG | 3 cut(s) | 692, 2965, 3140 |
| BseRI | GAGGAG | 3 cut(s) | 1919, 2147, 2633 |
| BseXI | GCAGC | 4 cut(s) | 516, 603, 1382, 2780 |
| BseYI | CCCAGC | 1 cut(s) | 2579 |
| BsgI | GTGCAG | 3 cut(s) | 1389, 1830, 2058 |
| Bsh1236I | CGCG | 1 cut(s) | 721 |
| BshFI | GGCC | 3 cut(s) | 3053, 3263, 3512 |
| BshNI | GGYRCC | 3 cut(s) | 325, 2665, 3317 |
| BshTI | ACCGGT | 1 cut(s) | 2033 |
| BsiHKAI | GWGCWC | 1 cut(s) | 3248 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2927 |
| BsiSI | CCGG | 4 cut(s) | 94, 1562, 2034, 3455 |
| BslFI | GGGAC | 1 cut(s) | 2977 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 698, 2335, 2620, 2776, 2961, 3405 |
| BsmAI | GTCTC | 4 cut(s) | 458, 656, 2516, 2592 |
| BsmFI | GGGAC | 1 cut(s) | 2977 |
| BsmI | GAATGC | 2 cut(s) | 427, 646 |
| BsnI | GGCC | 3 cut(s) | 3053, 3263, 3512 |
| BsoBI | CYCGRG | 1 cut(s) | 2927 |
| Bsp119I | TTCGAA | 1 cut(s) | 60 |
| Bsp1286I | GDGCHC | 1 cut(s) | 3248 |
| Bsp1407I | TGTACA | 2 cut(s) | 1867, 2095 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 645, 3247 |
| BspACI | CCGC | 8 cut(s) | 267, 497, 721, 2770, 2777, 2885, 3429, 3522 |
| BspANI | GGCC | 3 cut(s) | 3053, 3263, 3512 |
| BspFNI | CGCG | 1 cut(s) | 721 |
| BspHI | TCATGA | 2 cut(s) | 1858, 2086 |
| BspMAI | CTGCAG | 2 cut(s) | 1240, 1423 |
| BspOI | GCTAGC | 1 cut(s) | 2865 |
| BspPI | GGATC | 6 cut(s) | 507, 2363, 2376, 2811, 2899, 3397 |
| BspT104I | TTCGAA | 1 cut(s) | 60 |
| BspT107I | GGYRCC | 3 cut(s) | 325, 2665, 3317 |
| BsrDI | GCAATG | 6 cut(s) | 329, 442, 1677, 2233, 2574, 3388 |
| BsrFI | RCCGGY | 2 cut(s) | 2033, 3454 |
| BsrGI | TGTACA | 2 cut(s) | 1867, 2095 |
| BsrI | ACTGG | 3 cut(s) | 692, 2965, 3140 |
| BssAI | RCCGGY | 2 cut(s) | 2033, 3454 |
| BssECI | CCNNGG | 7 cut(s) | 1308, 1794, 2022, 2559, 2836, 2928, 3012 |
| BssNI | GRCGYC | 1 cut(s) | 153 |
| BssT1I | CCWWGG | 4 cut(s) | 1794, 2022, 2836, 3012 |
| Bst2UI | CCWGG | 4 cut(s) | 1309, 2366, 2561, 3554 |
| Bst4CI | ACNGT | 8 cut(s) | 717, 787, 985, 1304, 1388, 2114, 3258, 3578 |
| Bst6I | CTCTTC | 7 cut(s) | 194, 654, 1392, 1631, 2340, 2634, 2712 |
| BstACI | GRCGYC | 1 cut(s) | 153 |
| BstAUI | TGTACA | 2 cut(s) | 1867, 2095 |
| BstBI | TTCGAA | 1 cut(s) | 60 |
| BstC8I | GCNNGC | 7 cut(s) | 2410, 2433, 2489, 2521, 2863, 3322, 3585 |
| BstF5I | GGATG | 3 cut(s) | 46, 1570, 2589 |
| BstFNI | CGCG | 1 cut(s) | 721 |
| BstHHI | GCGC | 6 cut(s) | 596, 1002, 1128, 1356, 1499, 3030 |
| BstMAI | GTCTC | 4 cut(s) | 458, 656, 2516, 2592 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 2871, 3234, 3243, 3518 |
| BstNI | CCWGG | 4 cut(s) | 1309, 2366, 2561, 3554 |
| BstSCI | CCNGG | 4 cut(s) | 1307, 2364, 2559, 3552 |
| BstSFI | CTRYAG | 3 cut(s) | 807, 1236, 1419 |
| BstUI | CGCG | 1 cut(s) | 721 |
| BstV1I | GCAGC | 4 cut(s) | 516, 603, 1382, 2780 |
| BstV2I | GAAGAC | 4 cut(s) | 750, 1796, 2024, 3552 |
| BstX2I | RGATCY | 5 cut(s) | 1403, 2323, 2368, 2803, 3389 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 233, 1364, 2843 |
| BstYI | RGATCY | 5 cut(s) | 1403, 2323, 2368, 2803, 3389 |
| BsuI | GTATCC | 4 cut(s) | 925, 1735, 1945, 2173 |
| BsuRI | GGCC | 3 cut(s) | 3053, 3263, 3512 |
| BtsCI | GGATG | 3 cut(s) | 46, 1570, 2589 |
| BtsI | GCAGTG | 2 cut(s) | 943, 3190 |
| BtsIMutI | CAGTG | 9 cut(s) | 154, 316, 915, 943, 1393, 1838, 2066, 2119, 3190 |
| Cac8I | GCNNGC | 7 cut(s) | 2410, 2433, 2489, 2521, 2863, 3322, 3585 |
| CaiI | CAGNNNCTG | 1 cut(s) | 860 |
| CciI | TCATGA | 2 cut(s) | 1858, 2086 |
| CfoI | GCGC | 6 cut(s) | 596, 1002, 1128, 1356, 1499, 3030 |
| Cfr10I | RCCGGY | 2 cut(s) | 2033, 3454 |
| Cfr13I | GGNCC | 4 cut(s) | 91, 1478, 3051, 3262 |
| CseI | GACGC | 2 cut(s) | 142, 3487 |
| Csp6I | GTAC | 8 cut(s) | 326, 734, 1254, 1868, 2096, 2280, 2708, 3271 |
| CspAI | ACCGGT | 1 cut(s) | 2033 |
| CviQI | GTAC | 8 cut(s) | 326, 734, 1254, 1868, 2096, 2280, 2708, 3271 |
| DraI | TTTAAA | 1 cut(s) | 402 |
| Eam1104I | CTCTTC | 7 cut(s) | 194, 654, 1392, 1631, 2340, 2634, 2712 |
| EarI | CTCTTC | 7 cut(s) | 194, 654, 1392, 1631, 2340, 2634, 2712 |
| EciI | GGCGGA | 1 cut(s) | 512 |
| Ecl136II | GAGCTC | 1 cut(s) | 3246 |
| Eco130I | CCWWGG | 4 cut(s) | 1794, 2022, 2836, 3012 |
| Eco24I | GRGCYC | 1 cut(s) | 3248 |
| Eco47I | GGWCC | 2 cut(s) | 91, 1478 |
| Eco53kI | GAGCTC | 1 cut(s) | 3246 |
| Eco57I | CTGAAG | 6 cut(s) | 813, 918, 1572, 2736, 2877, 3309 |
| Eco88I | CYCGRG | 1 cut(s) | 2927 |
| EcoICRI | GAGCTC | 1 cut(s) | 3246 |
| EcoRII | CCWGG | 4 cut(s) | 1307, 2364, 2559, 3552 |
| EcoT14I | CCWWGG | 4 cut(s) | 1794, 2022, 2836, 3012 |
| EcoT22I | ATGCAT | 1 cut(s) | 2989 |
| EcoT38I | GRGCYC | 1 cut(s) | 3248 |
| ErhI | CCWWGG | 4 cut(s) | 1794, 2022, 2836, 3012 |
| FaqI | GGGAC | 1 cut(s) | 2977 |
| FauI | CCCGC | 1 cut(s) | 260 |
| FbaI | TGATCA | 2 cut(s) | 1161, 2452 |
| FblI | GTMKAC | 4 cut(s) | 156, 363, 2543, 3501 |
| Fnu4HI | GCNGC | 5 cut(s) | 505, 592, 1371, 2794, 3522 |
| FokI | GGATG | 3 cut(s) | 33, 1557, 2596 |
| FriOI | GRGCYC | 1 cut(s) | 3248 |
| Fsp4HI | GCNGC | 5 cut(s) | 505, 592, 1371, 2794, 3522 |
| GlaI | GCGC | 6 cut(s) | 595, 1001, 1127, 1355, 1498, 3029 |
| GluI | GCNGC | 5 cut(s) | 505, 592, 1371, 2794, 3522 |
| GsaI | CCCAGC | 1 cut(s) | 2583 |
| GsuI | CTGGAG | 4 cut(s) | 675, 723, 2247, 2312 |
| HaeIII | GGCC | 3 cut(s) | 3053, 3263, 3512 |
| HapII | CCGG | 4 cut(s) | 94, 1562, 2034, 3455 |
| HgaI | GACGC | 2 cut(s) | 142, 3487 |
| HhaI | GCGC | 6 cut(s) | 596, 1002, 1128, 1356, 1499, 3030 |
| Hin1I | GRCGYC | 1 cut(s) | 153 |
| Hin6I | GCGC | 6 cut(s) | 594, 1000, 1126, 1354, 1497, 3028 |
| HinP1I | GCGC | 6 cut(s) | 594, 1000, 1126, 1354, 1497, 3028 |
| HincII | GTYRAC | 3 cut(s) | 157, 1296, 1877 |
| HindII | GTYRAC | 3 cut(s) | 157, 1296, 1877 |
| HindIII | AAGCTT | 2 cut(s) | 609, 3192 |
| HpaII | CCGG | 4 cut(s) | 94, 1562, 2034, 3455 |
| Hpy99I | CGWCG | 1 cut(s) | 158 |
| HpyAV | CCTTC | 9 cut(s) | 79, 627, 1477, 1559, 2565, 2627, 3284, 3456, 3502 |
| HpyCH4III | ACNGT | 8 cut(s) | 717, 787, 985, 1304, 1388, 2114, 3258, 3578 |
| HpyCH4IV | ACGT | 1 cut(s) | 1938 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 2871, 3234, 3243, 3518 |
| HpySE526I | ACGT | 1 cut(s) | 1938 |
| Hsp92I | GRCGYC | 1 cut(s) | 153 |
| HspAI | GCGC | 6 cut(s) | 594, 1000, 1126, 1354, 1497, 3028 |
| KpnI | GGTACC | 1 cut(s) | 329 |
| Ksp22I | TGATCA | 2 cut(s) | 1161, 2452 |
| LmnI | GCTCC | 4 cut(s) | 1378, 1597, 2879, 3562 |
| Lsp1109I | GCAGC | 4 cut(s) | 516, 603, 1382, 2780 |
| MaeII | ACGT | 1 cut(s) | 1938 |
| MaeIII | GTNAC | 6 cut(s) | 1141, 1723, 1756, 1984, 2360, 2722 |
| MflI | RGATCY | 5 cut(s) | 1403, 2323, 2368, 2803, 3389 |
| MhlI | GDGCHC | 1 cut(s) | 3248 |
| MlyI | GAGTC | 4 cut(s) | 740, 1655, 2549, 3175 |
| MmeI | TCCRAC | 2 cut(s) | 1108, 2316 |
| Mph1103I | ATGCAT | 1 cut(s) | 2989 |
| MroXI | GAANNNNTTC | 6 cut(s) | 610, 1612, 1626, 2937, 3193, 3567 |
| MseI | TTAA | 6 cut(s) | 135, 285, 401, 1428, 2646, 3144 |
| MslI | CAYNNNNRTG | 1 cut(s) | 432 |
| MspA1I | CMGCKG | 1 cut(s) | 1619 |
| MspI | CCGG | 4 cut(s) | 94, 1562, 2034, 3455 |
| MspR9I | CCNGG | 4 cut(s) | 1309, 2366, 2561, 3554 |
| Mva1269I | GAATGC | 2 cut(s) | 427, 646 |
| MvaI | CCWGG | 4 cut(s) | 1309, 2366, 2561, 3554 |
| MvnI | CGCG | 1 cut(s) | 721 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 2871, 3234, 3243, 3518 |
| NheI | GCTAGC | 1 cut(s) | 2861 |
| NmuCI | GTSAC | 5 cut(s) | 1723, 1756, 1984, 2360, 2722 |
| NsiI | ATGCAT | 1 cut(s) | 2989 |
| NspV | TTCGAA | 1 cut(s) | 60 |
| PagI | TCATGA | 2 cut(s) | 1858, 2086 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3248 |
| PctI | GAATGC | 2 cut(s) | 427, 646 |
| PdmI | GAANNNNTTC | 6 cut(s) | 610, 1612, 1626, 2937, 3193, 3567 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 698, 2335 |
| PinAI | ACCGGT | 1 cut(s) | 2033 |
| PkrI | GCNGC | 5 cut(s) | 506, 593, 1372, 2795, 3523 |
| PleI | GAGTC | 4 cut(s) | 740, 1655, 2548, 3174 |
| PpsI | GAGTC | 4 cut(s) | 740, 1655, 2548, 3174 |
| PshBI | ATTAAT | 1 cut(s) | 1428 |
| Psp124BI | GAGCTC | 1 cut(s) | 3248 |
| Psp6I | CCWGG | 4 cut(s) | 1307, 2364, 2559, 3552 |
| PspFI | CCCAGC | 1 cut(s) | 2579 |
| PspGI | CCWGG | 4 cut(s) | 1307, 2364, 2559, 3552 |
| PspPI | GGNCC | 4 cut(s) | 91, 1478, 3051, 3262 |
| PstI | CTGCAG | 2 cut(s) | 1240, 1423 |
| PstNI | CAGNNNCTG | 1 cut(s) | 860 |
| PsuI | RGATCY | 5 cut(s) | 1403, 2323, 2368, 2803, 3389 |
| PvuII | CAGCTG | 1 cut(s) | 1619 |
| RsaI | GTAC | 8 cut(s) | 327, 735, 1255, 1869, 2097, 2281, 2709, 3272 |
| RsaNI | GTAC | 8 cut(s) | 326, 734, 1254, 1868, 2096, 2280, 2708, 3271 |
| RseI | CAYNNNNRTG | 1 cut(s) | 432 |
| SacI | GAGCTC | 1 cut(s) | 3248 |
| SalI | GTCGAC | 1 cut(s) | 155 |
| SaqAI | TTAA | 6 cut(s) | 135, 285, 401, 1428, 2646, 3144 |
| SatI | GCNGC | 5 cut(s) | 505, 592, 1371, 2794, 3522 |
| Sau96I | GGNCC | 4 cut(s) | 91, 1478, 3051, 3262 |
| ScaI | AGTACT | 1 cut(s) | 1255 |
| SchI | GAGTC | 4 cut(s) | 740, 1655, 2549, 3175 |
| ScrFI | CCNGG | 4 cut(s) | 1309, 2366, 2561, 3554 |
| SduI | GDGCHC | 1 cut(s) | 3248 |
| SfcI | CTRYAG | 3 cut(s) | 807, 1236, 1419 |
| SfuI | TTCGAA | 1 cut(s) | 60 |
| SgrAI | CRCCGGYG | 1 cut(s) | 2033 |
| SinI | GGWCC | 2 cut(s) | 91, 1478 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 432 |
| SmlI | CTYRAG | 1 cut(s) | 2819 |
| SmoI | CTYRAG | 1 cut(s) | 2819 |
| SsiI | CCGC | 8 cut(s) | 267, 497, 721, 2770, 2777, 2885, 3429, 3522 |
| SspI | AATATT | 1 cut(s) | 358 |
| SstI | GAGCTC | 1 cut(s) | 3248 |
| StyD4I | CCNGG | 4 cut(s) | 1307, 2364, 2559, 3552 |
| StyI | CCWWGG | 4 cut(s) | 1794, 2022, 2836, 3012 |
| TaaI | ACNGT | 8 cut(s) | 717, 787, 985, 1304, 1388, 2114, 3258, 3578 |
| TaiI | ACGT | 1 cut(s) | 1941 |
| TaqI | TCGA | 5 cut(s) | 60, 76, 156, 1343, 3540 |
| TatI | WGTACW | 5 cut(s) | 1253, 1867, 2095, 2707, 3270 |
| TauI | GCSGC | 1 cut(s) | 3524 |
| Tru1I | TTAA | 6 cut(s) | 135, 285, 401, 1428, 2646, 3144 |
| Tru9I | TTAA | 6 cut(s) | 135, 285, 401, 1428, 2646, 3144 |
| TscAI | CASTG | 9 cut(s) | 154, 316, 922, 950, 1393, 1838, 2066, 2119, 3190 |
| TseFI | GTSAC | 5 cut(s) | 1723, 1756, 1984, 2360, 2722 |
| TseI | GCWGC | 4 cut(s) | 504, 591, 1370, 2793 |
| Tsp45I | GTSAC | 5 cut(s) | 1723, 1756, 1984, 2360, 2722 |
| TspGWI | ACGGA | 1 cut(s) | 39 |
| TspRI | CASTG | 9 cut(s) | 154, 316, 922, 950, 1393, 1838, 2066, 2119, 3190 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 698, 2335 |
| VpaK11BI | GGWCC | 2 cut(s) | 91, 1478 |
| VspI | ATTAAT | 1 cut(s) | 1428 |
| XapI | RAATTY | 8 cut(s) | 72, 210, 243, 1438, 2527, 3001, 3490, 3563 |
| XmiI | GTMKAC | 4 cut(s) | 156, 363, 2543, 3501 |
| XmnI | GAANNNNTTC | 6 cut(s) | 610, 1612, 1626, 2937, 3193, 3567 |
| ZrmI | AGTACT | 1 cut(s) | 1255 |
| Zsp2I | ATGCAT | 1 cut(s) | 2989 |