Rh4CG335300

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Forward (+)
59559529 .. 59564006
4478 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG335300.1

Sequence Viewer

Length: 3681 bp
ATGGACAAGAACCCGAGCTCCGCCTCGGATGACGTCACTGTGTTCCTAGACACGAGCCTTGACACCCACTTGGCCATCACCGTCTCCGGCAACGACACCGTTTCCGACCTCAAAAGAAAATTGGAAAATGAGCATCCGTTGAGCTTCGAAGAAATCAAAATTCGAGCTTTGAAGGTGGACCGGAGGGGAACCTTGTATCACCTCTCGGATTCAATGCGTGTTAAATGTGCTGTCAGTGGCGTCGACAGGGAGTGTTTTCTTTTTGCTGATGCTTCTATTACAGAGAAGAGGGGTGAAATTCAGCATGGTTCCCACAATTTTGGTTCTCGAATTTTTGATAATCCTTTGGTTAGTGGGGCTGATCGTCCTTTTGATGTTCTTAGCAAAAGGTTGTTCAGTGTTGATGATTCGGTACCATTGCTACTAGAGGGCAAGAAGAATAATATTGTAGACCAGAATGGTTCAGTGGATTCTGGTACAGAAACTTTAAAAGATTTGGAGATGGGAATCAAGCATTCTGATGATGATCATTGCAAAACTTCATTTGATGAGACAATCAATGGGCTAGAACCTAAAACACAGGCGGATCGCAGCCGATGTAGTGAGGGGTTTAGAGTTCCCACAGCACAAGAACACAATGAAGATACCTCAAAGGAAGAAATAAGTGAAGCCAAAAGCAGCGCATCTTTGGGAAAAGCTTCACCTTCTTCAAAGAATAGACAACAGAAGGCTAAGCAAAAAAGTGAAGAGACAGCACATCTGAAAGAAAATGACACTCCAGTTTATGGATTCAATGAAGAACAGTCGCGGATAGATATTGTACCTCCAGAAGACTCATTAGGAAATGAGGGTGGAGATGTTCCCTGTGATACGGCAGTAGTAAACAGAACTACTACAGAAGAACCTTGCAGGGCTTCAGCTTCTAATATGGATAACAGGTCAGATTCTGGACTTCATAGGAACAATGATACATACAAAGAAACTGAAGTTTCAGGAAAACACACTGACATTAGGTTGGATACATTTATGCACTGCAATACAGCAGTAGAAGATGCTTCACAATCTCAGACTGTTTCAAAGAAAAAGCGCAAGTTTGAAAACATAACTGATCTTGAAGATTCGTTGAAAGAAAACAATGTCTTGATTTGTGATTCTAATAAAGAGGCTTCCCAACAAGATGCTTCTCAATCTTGGACTGCTTCAAAGAAAAGGCGCAAGTTTGAAAAAGTAACTGATCTTGAAGATTTGATCAAAGAAAACAATGTCTTGATTTGTGATTCTAATAAAGAGGCTTCCCAACCAGAAATTACATCTGAACTCTCTGCAGGGAAAACTGCAAGTACTACCTTAGATGGTTCACTTGCTGAAACCACAGATTTGTTGACAAACAGTTCCAGGGGAAAGAAGAACAAAAAGAAAAAGAAAGCATCGAATCCTCTGCACCAAGTAGTTGATGCAGCTCCTTCTGGAAACGGTGATATGGAAGAGAGATCTATGGTTGCTTCTGCAGGAATTAATAATAAAAATTCAAGTGGAGAAGATGTAGCACCTATCAGTAGACTAGGTCTGAAGGAAGATAACTGCGCTTCTATCCGAGAGTTGCAGGAAAATCGTAAAGCACCCTCTTCACTTGCTACTGAAGAAAAACCAGAAGGTCATCCTCCCCTTGTTGTCAAAGCTCCTGGTGAAAATGGAACAAGTTCAGCTGAAAGAGTTCAAGAGAAGAGAGAGCCATCACAGACAAATGACTCGGAAGCAATGCTGTCTGAAAGCCAGGGTAAAACAGATGGGAACAATGCAAAACTAATTGTGACATCTGAATTATTGGATACGAATGAACCTGTCACCCCTAGTAAGAAGAAAAGGAAGAAAAGGAAGACCAAGGATTCCATCGGTGCAGAACACATTGTAGATTCTCAGTGTGATATTTCATTGGCTGAACCTCATGAAGCTGTACGTGGTCAACAGGATAGTGATAAAGCTAAGAACGAGGAGAGTAATTTTTCTCAGAAAAATGGGAAAGATATATCAGAAAAGGATACAGTGAGTTGCCATTTAGTTATGGAACCTGTCACCCCTAGTAAGAAGAAAAAGAAGAAAAGGAAGACCAAGGATTTCACCGGTGCAGAACACATTGTAGATTCTCAGTGTGATATTTCATTGGCTGAACCTCATGAAGCTGTACATGGTGAACAGGACAGTGATAAAGCTAAGAACGAGGAGAGTAATTTTTCTCAGAAAAATGGGAAAGACATATCAGAAAAGGATACAAAGAGTTGCCATTTAGTTATGGAAGCTGATAAATGTGACGGCGATGAGGTTGAAACTTCACAGCAAGTTGGCAAAACTCCAGCAAATGCAGAAAGTACGAAAAAGAAATCTAAGAGGAAACATGATGCCATGACAAAAGATCTCCAGAAGTTGGAAGCAGAAGAGAAAAGTGCTAGTCACCAGGATCCTGCTCTAACAACTGATAATAGAACTGAGGCAGCAGCCAGCAAAAGAAAGAAAAGTAAGCTGGCAAAAACAATTCTGATTGATCAGTCAAAAGCAAAATGTCTGGAATCTGGTAGCGAGTATGGAGTTCAAATTGGTAGTCTCCGTGCTTGCTCAAATTTCATGTCTGAGTCTACTAAACTTCCTTCCCATGCACAAGAACACATTGCTGGGATGCCTCTCAAACCTAATCTTTCTGGCAACCATGAGGAGGTTTCTTGTGAAGGAGAAGAGATTAACTTTCATAAATATATGGTGCCTAGCCAAAGCAAGAATGAAGTTGTTGCTTCTGGTGAAGTACATGCTGAAGAGGTGACGAAATCAAAAAAAGTGGATAACAAGCAGAAGCCTAAAAAGAACCACAAAGCGGTTGATTCAAGTGGCTGCTCATGGGATCTGCAAAGTCCACTCAAGTCGCATGATAACCAAGGGATTGGTGAAAAGTCTGAAGCTAGCAAATCTAGCTCCATGCAACCGCAAGGATCAATATCTAATGTTGATGATGTTGTGCCTCAGCCTGAGGAAATTGTTCCCAAGAAAGTTTCCAAAACTGGGACTAAAGCCCAATCATCTGATGCATCTGGTAAAATAAATTCCATTCCCAAGGTAGCTGGAAAGCGCAGTCTTGCCAATGGTTCTGGGGCCAATAGTATTACCGAGAAAAAGAATGAAGCTGTTGCTATATCAAGTTCTAAGACGGAAAAATCAAACAATAAAGACCAAAAGAAACCAGTTAAGAAGCACCAATCAGGTGTGAGTCAGAATGTTGTGGCCAGTGGAAAAGCTTCTGGTAATGATGATGGGGAAGTGTTGAATGGCTCAAAAGACAAGAAGAGCTCAGCGATACCGTTGGCCCCTGAGTACAGGAATAAAAGTTCTGAAGGCAAATATGGATTTGTTGATTCAGGTGCCAGCACCACCTCATCTGATTACTCATTGTCCTCTGAATCTGACTACTCAGATGGCGAAAGCAATGCAGGATCTTGTGCCTCATCAGGGAAGAAGAATACAGGGAGAAGCGGTTATTCTAGCATAAAGGGTAAACCGGCAAGAAGGCTAAAAAACGATGAGATTTTTCTAAATTCAAGCGTCTACAAGAAGGCCAAACTTGCCGCATCTCAATCACAACTCGAAGAAGACAGCCAGGCTCCTGAATTTGTTCCAGACAGTCAGCCTGCCTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1226

Amino Acids

133.22

Weight (kDa)

6.04

Isoelectric Point (pI)

48.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 36
Acc65I GGTACC 1 cut(s) 412
AccB1I GGYRCC 3 cut(s) 412, 2752, 3404
AccB7I CCANNNNNTGG 2 cut(s) 785, 2422
AccI GTMKAC 5 cut(s) 243, 450, 1558, 2630, 3588
AccII CGCG 1 cut(s) 808
AciI CCGC 7 cut(s) 21, 584, 808, 2864, 2972, 3516, 3609
AclWI GGATC 6 cut(s) 594, 2450, 2463, 2898, 2986, 3484
AcoI YGGCCR 2 cut(s) 72, 3267
AcsI RAATTY 8 cut(s) 159, 297, 330, 1525, 2614, 3088, 3577, 3650
AcuI CTGAAG 7 cut(s) 900, 1005, 1589, 1659, 2823, 2964, 3396
AcyI GRCGYC 2 cut(s) 33, 240
AfaI GTAC 9 cut(s) 414, 478, 822, 1342, 1956, 2184, 2368, 2796, 3359
AfiI CCNNNNNNNGG 6 cut(s) 785, 2422, 2707, 2863, 3048, 3492
AgeI ACCGGT 1 cut(s) 2120
AjnI CCWGG 5 cut(s) 1394, 1681, 1773, 2451, 3639
AloI GAACNNNNNNTCC 3 cut(s) 34, 3355, 3387
Alw21I GWGCWC 2 cut(s) 20, 3335
Alw26I GTCTC 4 cut(s) 88, 545, 743, 2603
AlwI GGATC 6 cut(s) 594, 2450, 2463, 2898, 2986, 3484
AlwNI CAGNNNCTG 1 cut(s) 947
Ama87I CYCGRG 1 cut(s) 13
AoxI GGCC 5 cut(s) 72, 3138, 3267, 3348, 3597
ApeKI GCWGC 6 cut(s) 591, 678, 1457, 2489, 2492, 2880
ApoI RAATTY 8 cut(s) 159, 297, 330, 1525, 2614, 3088, 3577, 3650
ArsI GACNNNNNNTTYG 4 cut(s) 2581, 2606, 2613, 2638
AseI ATTAAT 1 cut(s) 1515
AsiGI ACCGGT 1 cut(s) 2120
Asp700I GAANNNNTTC 6 cut(s) 697, 1699, 1713, 3024, 3280, 3654
Asp718I GGTACC 1 cut(s) 412
AspLEI GCGC 5 cut(s) 683, 1089, 1215, 1586, 3117
AspS9I GGNCC 3 cut(s) 178, 3138, 3349
AsuII TTCGAA 1 cut(s) 147
AsuNHI GCTAGC 1 cut(s) 2948
AvaI CYCGRG 1 cut(s) 13
AvaII GGWCC 1 cut(s) 178
AxyI CCTNAGG 1 cut(s) 3015
BaeI ACNNNNGTAYC 2 cut(s) 861, 894
BalI TGGCCA 2 cut(s) 74, 3269
BamHI GGATCC 1 cut(s) 2455
BanI GGYRCC 3 cut(s) 412, 2752, 3404
BanII GRGCYC 2 cut(s) 20, 3335
BauI CACGAG 1 cut(s) 52
BbsI GAAGAC 4 cut(s) 837, 1883, 2111, 3639
Bbv12I GWGCWC 2 cut(s) 20, 3335
BbvCI CCTCAGC 1 cut(s) 3009
BbvI GCAGC 6 cut(s) 603, 690, 1469, 2501, 2504, 2867
BccI CCATC 8 cut(s) 83, 496, 1346, 1741, 1781, 1898, 3290, 3452
BceAI ACGGC 2 cut(s) 888, 2326
BcgI CGANNNNNNTGC 6 cut(s) 1420, 1454, 1592, 1626, 3452, 3486
BciT130I CCWGG 5 cut(s) 1396, 1683, 1775, 2453, 3641
BciVI GTATCC 4 cut(s) 1012, 1822, 2032, 2260
BclI TGATCA 3 cut(s) 526, 1248, 2539
BcoDI GTCTC 4 cut(s) 88, 545, 743, 2603
BfmI CTRYAG 3 cut(s) 894, 1323, 1506
BfuI GTATCC 4 cut(s) 1012, 1822, 2032, 2260
BglII AGATCT 2 cut(s) 1490, 2410
BisI GCNGC 7 cut(s) 592, 679, 1458, 2490, 2493, 2881, 3609
BlpI GCTNAGC 2 cut(s) 732, 3334
BlsI GCNGC 7 cut(s) 593, 680, 1459, 2491, 2494, 2882, 3610
BmcAI AGTACT 1 cut(s) 1342
Bme1390I CCNGG 5 cut(s) 1396, 1683, 1775, 2453, 3641
Bme18I GGWCC 1 cut(s) 178
BmeT110I CYCGRG 1 cut(s) 13
BmgT120I GGNCC 3 cut(s) 178, 3138, 3349
BmrFI CCNGG 5 cut(s) 1396, 1683, 1775, 2453, 3641
BmrI ACTGGG 1 cut(s) 3057
BmtI GCTAGC 1 cut(s) 2952
BmuI ACTGGG 1 cut(s) 3057
BpiI GAAGAC 4 cut(s) 837, 1883, 2111, 3639
BpmI CTGGAG 4 cut(s) 762, 810, 2334, 2399
Bpu10I CCTNAGC 1 cut(s) 3009
Bpu1102I GCTNAGC 2 cut(s) 732, 3334
Bpu14I TTCGAA 1 cut(s) 147
BpuEI CTTGAG 1 cut(s) 2891
BsaAI YACGTR 1 cut(s) 1958
BsaBI GATNNNNATC 3 cut(s) 506, 525, 2983
BsaHI GRCGYC 2 cut(s) 33, 240
BsaJI CCNNGG 7 cut(s) 24, 1395, 1774, 1881, 2109, 2923, 3099
BsaWI WCCGGW 2 cut(s) 180, 2120
BsaXI ACNNNNNCTCC 5 cut(s) 32, 1527, 1557, 3502, 3532
Bsc4I CCNNNNNNNGG 6 cut(s) 785, 2422, 2707, 2863, 3048, 3492
Bse118I RCCGGY 2 cut(s) 2120, 3541
Bse1I ACTGG 4 cut(s) 779, 3052, 3227, 3270
Bse21I CCTNAGG 1 cut(s) 3015
Bse3DI GCAATG 5 cut(s) 416, 529, 1764, 2661, 3475
Bse8I GATNNNNATC 3 cut(s) 506, 525, 2983
BseBI CCWGG 5 cut(s) 1396, 1683, 1775, 2453, 3641
BseDI CCNNGG 7 cut(s) 24, 1395, 1774, 1881, 2109, 2923, 3099
BseGI GGATG 4 cut(s) 34, 133, 1657, 2676
BseJI GATNNNNATC 3 cut(s) 506, 525, 2983
BseLI CCNNNNNNNGG 6 cut(s) 785, 2422, 2707, 2863, 3048, 3492
BseMI GCAATG 5 cut(s) 416, 529, 1764, 2661, 3475
BseNI ACTGG 4 cut(s) 779, 3052, 3227, 3270
BseRI GAGGAG 3 cut(s) 2006, 2234, 2720
BseXI GCAGC 6 cut(s) 603, 690, 1469, 2501, 2504, 2867
BseYI CCCAGC 1 cut(s) 2666
BsgI GTGCAG 3 cut(s) 1424, 1917, 2145
Bsh1236I CGCG 1 cut(s) 808
BshFI GGCC 5 cut(s) 74, 3140, 3269, 3350, 3599
BshNI GGYRCC 3 cut(s) 412, 2752, 3404
BshTI ACCGGT 1 cut(s) 2120
BsiHKAI GWGCWC 2 cut(s) 20, 3335
BsiHKCI CYCGRG 1 cut(s) 13
BsiSI CCGG 4 cut(s) 87, 181, 2121, 3542
BslFI GGGAC 1 cut(s) 3064
BslI CCNNNNNNNGG 6 cut(s) 785, 2422, 2707, 2863, 3048, 3492
BsmAI GTCTC 4 cut(s) 88, 545, 743, 2603
BsmBI CGTCTC 1 cut(s) 88
BsmFI GGGAC 1 cut(s) 3064
BsmI GAATGC 1 cut(s) 514
BsnI GGCC 5 cut(s) 74, 3140, 3269, 3350, 3599
BsoBI CYCGRG 1 cut(s) 13
Bsp119I TTCGAA 1 cut(s) 147
Bsp1286I GDGCHC 2 cut(s) 20, 3335
Bsp1407I TGTACA 1 cut(s) 2182
Bsp1720I GCTNAGC 2 cut(s) 732, 3334
BspACI CCGC 7 cut(s) 21, 584, 808, 2864, 2972, 3516, 3609
BspANI GGCC 5 cut(s) 74, 3140, 3269, 3350, 3599
BspFNI CGCG 1 cut(s) 808
BspHI TCATGA 2 cut(s) 1945, 2173
BspMAI CTGCAG 2 cut(s) 1327, 1510
BspOI GCTAGC 1 cut(s) 2952
BspPI GGATC 6 cut(s) 594, 2450, 2463, 2898, 2986, 3484
BspQI GCTCTTC 1 cut(s) 3323
BspT104I TTCGAA 1 cut(s) 147
BspT107I GGYRCC 3 cut(s) 412, 2752, 3404
BsrDI GCAATG 5 cut(s) 416, 529, 1764, 2661, 3475
BsrFI RCCGGY 2 cut(s) 2120, 3541
BsrGI TGTACA 1 cut(s) 2182
BsrI ACTGG 4 cut(s) 779, 3052, 3227, 3270
BssAI RCCGGY 2 cut(s) 2120, 3541
BssECI CCNNGG 7 cut(s) 24, 1395, 1774, 1881, 2109, 2923, 3099
BssNI GRCGYC 2 cut(s) 33, 240
BssSI CACGAG 1 cut(s) 52
BssT1I CCWWGG 4 cut(s) 1881, 2109, 2923, 3099
Bst2BI CACGAG 1 cut(s) 52
Bst2UI CCWGG 5 cut(s) 1396, 1683, 1775, 2453, 3641
Bst6I CTCTTC 9 cut(s) 281, 741, 1479, 1630, 1718, 2427, 2721, 2799, 3323
BstACI GRCGYC 2 cut(s) 33, 240
BstAUI TGTACA 1 cut(s) 2182
BstBAI YACGTR 1 cut(s) 1958
BstBI TTCGAA 1 cut(s) 147
BstC8I GCNNGC 6 cut(s) 2497, 2520, 2608, 2950, 3409, 3672
BstF5I GGATG 4 cut(s) 34, 133, 1657, 2676
BstFNI CGCG 1 cut(s) 808
BstHHI GCGC 5 cut(s) 683, 1089, 1215, 1586, 3117
BstMAI GTCTC 4 cut(s) 88, 545, 743, 2603
BstMWI GCNNNNNNNGC 2 cut(s) 2958, 3605
BstNI CCWGG 5 cut(s) 1396, 1683, 1775, 2453, 3641
BstNSI RCATGY 1 cut(s) 2801
BstSCI CCNGG 5 cut(s) 1394, 1681, 1773, 2451, 3639
BstSFI CTRYAG 3 cut(s) 894, 1323, 1506
BstUI CGCG 1 cut(s) 808
BstV1I GCAGC 6 cut(s) 603, 690, 1469, 2501, 2504, 2867
BstV2I GAAGAC 4 cut(s) 837, 1883, 2111, 3639
BstX2I RGATCY 5 cut(s) 1490, 2410, 2455, 2890, 3476
BstXI CCANNNNNNTGG 2 cut(s) 320, 2930
BstYI RGATCY 5 cut(s) 1490, 2410, 2455, 2890, 3476
Bsu36I CCTNAGG 1 cut(s) 3015
BsuI GTATCC 4 cut(s) 1012, 1822, 2032, 2260
BsuRI GGCC 5 cut(s) 74, 3140, 3269, 3350, 3599
BtgZI GCGATG 1 cut(s) 2328
BtsCI GGATG 4 cut(s) 34, 133, 1657, 2676
BtsI GCAGTG 1 cut(s) 1030
Cac8I GCNNGC 6 cut(s) 2497, 2520, 2608, 2950, 3409, 3672
CaiI CAGNNNCTG 1 cut(s) 947
CciI TCATGA 2 cut(s) 1945, 2173
CfoI GCGC 5 cut(s) 683, 1089, 1215, 1586, 3117
Cfr10I RCCGGY 2 cut(s) 2120, 3541
Cfr13I GGNCC 3 cut(s) 178, 3138, 3349
CseI GACGC 2 cut(s) 229, 3574
Csp6I GTAC 9 cut(s) 413, 477, 821, 1341, 1955, 2183, 2367, 2795, 3358
CspAI ACCGGT 1 cut(s) 2120
CspCI CAANNNNNGTGG 2 cut(s) 2808, 2843
CviQI GTAC 9 cut(s) 413, 477, 821, 1341, 1955, 2183, 2367, 2795, 3358
DraI TTTAAA 1 cut(s) 489
EaeI YGGCCR 2 cut(s) 72, 3267
Eam1104I CTCTTC 9 cut(s) 281, 741, 1479, 1630, 1718, 2427, 2721, 2799, 3323
EarI CTCTTC 9 cut(s) 281, 741, 1479, 1630, 1718, 2427, 2721, 2799, 3323
EciI GGCGGA 2 cut(s) 10, 599
Ecl136II GAGCTC 2 cut(s) 18, 3333
Eco130I CCWWGG 4 cut(s) 1881, 2109, 2923, 3099
Eco24I GRGCYC 2 cut(s) 20, 3335
Eco47I GGWCC 1 cut(s) 178
Eco53kI GAGCTC 2 cut(s) 18, 3333
Eco57I CTGAAG 7 cut(s) 900, 1005, 1589, 1659, 2823, 2964, 3396
Eco81I CCTNAGG 1 cut(s) 3015
Eco88I CYCGRG 1 cut(s) 13
EcoICRI GAGCTC 2 cut(s) 18, 3333
EcoRII CCWGG 5 cut(s) 1394, 1681, 1773, 2451, 3639
EcoT14I CCWWGG 4 cut(s) 1881, 2109, 2923, 3099
EcoT22I ATGCAT 1 cut(s) 3076
EcoT38I GRGCYC 2 cut(s) 20, 3335
ErhI CCWWGG 4 cut(s) 1881, 2109, 2923, 3099
Esp3I CGTCTC 1 cut(s) 88
FaqI GGGAC 1 cut(s) 3064
FbaI TGATCA 3 cut(s) 526, 1248, 2539
FblI GTMKAC 5 cut(s) 243, 450, 1558, 2630, 3588
Fnu4HI GCNGC 7 cut(s) 592, 679, 1458, 2490, 2493, 2881, 3609
FokI GGATG 4 cut(s) 41, 120, 1644, 2683
FriOI GRGCYC 2 cut(s) 20, 3335
Fsp4HI GCNGC 7 cut(s) 592, 679, 1458, 2490, 2493, 2881, 3609
GlaI GCGC 5 cut(s) 682, 1088, 1214, 1585, 3116
GluI GCNGC 7 cut(s) 592, 679, 1458, 2490, 2493, 2881, 3609
GsaI CCCAGC 1 cut(s) 2670
GsuI CTGGAG 4 cut(s) 762, 810, 2334, 2399
HaeIII GGCC 5 cut(s) 74, 3140, 3269, 3350, 3599
HapII CCGG 4 cut(s) 87, 181, 2121, 3542
HgaI GACGC 2 cut(s) 229, 3574
HhaI GCGC 5 cut(s) 683, 1089, 1215, 1586, 3117
Hin1I GRCGYC 2 cut(s) 33, 240
Hin6I GCGC 5 cut(s) 681, 1087, 1213, 1584, 3115
HinP1I GCGC 5 cut(s) 681, 1087, 1213, 1584, 3115
HincII GTYRAC 3 cut(s) 244, 1383, 1964
HindII GTYRAC 3 cut(s) 244, 1383, 1964
HindIII AAGCTT 2 cut(s) 696, 3279
HpaII CCGG 4 cut(s) 87, 181, 2121, 3542
Hpy99I CGWCG 1 cut(s) 245
HpyCH4IV ACGT 2 cut(s) 33, 1957
HpyF10VI GCNNNNNNNGC 2 cut(s) 2958, 3605
HpySE526I ACGT 2 cut(s) 33, 1957
Hsp92I GRCGYC 2 cut(s) 33, 240
HspAI GCGC 5 cut(s) 681, 1087, 1213, 1584, 3115
KpnI GGTACC 1 cut(s) 416
Ksp22I TGATCA 3 cut(s) 526, 1248, 2539
LguI GCTCTTC 1 cut(s) 3323
LmnI GCTCC 5 cut(s) 23, 1465, 1684, 2966, 3649
Lsp1109I GCAGC 6 cut(s) 603, 690, 1469, 2501, 2504, 2867
MaeII ACGT 2 cut(s) 33, 1957
MaeIII GTNAC 8 cut(s) 34, 1228, 1810, 1843, 2071, 2306, 2447, 2809
MflI RGATCY 5 cut(s) 1490, 2410, 2455, 2890, 3476
MhlI GDGCHC 2 cut(s) 20, 3335
MlsI TGGCCA 2 cut(s) 74, 3269
MluNI TGGCCA 2 cut(s) 74, 3269
MlyI GAGTC 4 cut(s) 827, 1742, 2636, 3262
MmeI TCCRAC 3 cut(s) 129, 996, 2403
Mox20I TGGCCA 2 cut(s) 74, 3269
Mph1103I ATGCAT 1 cut(s) 3076
MroXI GAANNNNTTC 6 cut(s) 697, 1699, 1713, 3024, 3280, 3654
MscI TGGCCA 2 cut(s) 74, 3269
MseI TTAA 5 cut(s) 222, 488, 1515, 2733, 3231
MslI CAYNNNNRTG 1 cut(s) 519
Msp20I TGGCCA 2 cut(s) 74, 3269
MspA1I CMGCKG 1 cut(s) 1706
MspI CCGG 4 cut(s) 87, 181, 2121, 3542
MspR9I CCNGG 5 cut(s) 1396, 1683, 1775, 2453, 3641
Mva1269I GAATGC 1 cut(s) 514
MvaI CCWGG 5 cut(s) 1396, 1683, 1775, 2453, 3641
MvnI CGCG 1 cut(s) 808
MwoI GCNNNNNNNGC 2 cut(s) 2958, 3605
NheI GCTAGC 1 cut(s) 2948
NmuCI GTSAC 7 cut(s) 34, 1810, 1843, 2071, 2306, 2447, 2809
NsiI ATGCAT 1 cut(s) 3076
NspI RCATGY 1 cut(s) 2801
NspV TTCGAA 1 cut(s) 147
PagI TCATGA 2 cut(s) 1945, 2173
PciSI GCTCTTC 1 cut(s) 3323
PctI GAATGC 1 cut(s) 514
PdmI GAANNNNTTC 6 cut(s) 697, 1699, 1713, 3024, 3280, 3654
PflFI GACNNNGTC 1 cut(s) 1563
PflMI CCANNNNNTGG 2 cut(s) 785, 2422
PinAI ACCGGT 1 cut(s) 2120
PkrI GCNGC 7 cut(s) 593, 680, 1459, 2491, 2494, 2882, 3610
PleI GAGTC 4 cut(s) 827, 1742, 2635, 3261
PpsI GAGTC 4 cut(s) 827, 1742, 2635, 3261
Ppu21I YACGTR 1 cut(s) 1958
PshBI ATTAAT 1 cut(s) 1515
Psp124BI GAGCTC 2 cut(s) 20, 3335
Psp6I CCWGG 5 cut(s) 1394, 1681, 1773, 2451, 3639
PspFI CCCAGC 1 cut(s) 2666
PspGI CCWGG 5 cut(s) 1394, 1681, 1773, 2451, 3639
PspPI GGNCC 3 cut(s) 178, 3138, 3349
PstI CTGCAG 2 cut(s) 1327, 1510
PstNI CAGNNNCTG 1 cut(s) 947
PsuI RGATCY 5 cut(s) 1490, 2410, 2455, 2890, 3476
PsyI GACNNNGTC 1 cut(s) 1563
PvuII CAGCTG 1 cut(s) 1706
RsaI GTAC 9 cut(s) 414, 478, 822, 1342, 1956, 2184, 2368, 2796, 3359
RsaNI GTAC 9 cut(s) 413, 477, 821, 1341, 1955, 2183, 2367, 2795, 3358
RseI CAYNNNNRTG 1 cut(s) 519
SacI GAGCTC 2 cut(s) 20, 3335
SalI GTCGAC 1 cut(s) 242
SapI GCTCTTC 1 cut(s) 3323
SaqAI TTAA 5 cut(s) 222, 488, 1515, 2733, 3231
SatI GCNGC 7 cut(s) 592, 679, 1458, 2490, 2493, 2881, 3609
Sau96I GGNCC 3 cut(s) 178, 3138, 3349
ScaI AGTACT 1 cut(s) 1342
SchI GAGTC 4 cut(s) 827, 1742, 2636, 3262
ScrFI CCNGG 5 cut(s) 1396, 1683, 1775, 2453, 3641
SduI GDGCHC 2 cut(s) 20, 3335
SfcI CTRYAG 3 cut(s) 894, 1323, 1506
SfuI TTCGAA 1 cut(s) 147
SgrAI CRCCGGYG 1 cut(s) 2120
SinI GGWCC 1 cut(s) 178
SmiMI CAYNNNNRTG 1 cut(s) 519
SmlI CTYRAG 1 cut(s) 2906
SmoI CTYRAG 1 cut(s) 2906
SsiI CCGC 7 cut(s) 21, 584, 808, 2864, 2972, 3516, 3609
SspI AATATT 1 cut(s) 445
SstI GAGCTC 2 cut(s) 20, 3335
StyD4I CCNGG 5 cut(s) 1394, 1681, 1773, 2451, 3639
StyI CCWWGG 4 cut(s) 1881, 2109, 2923, 3099
TaiI ACGT 2 cut(s) 36, 1960
TaqI TCGA 6 cut(s) 147, 163, 243, 328, 1430, 3627
TatI WGTACW 4 cut(s) 1340, 2182, 2794, 3357
TauI GCSGC 1 cut(s) 3611
Tru1I TTAA 5 cut(s) 222, 488, 1515, 2733, 3231
Tru9I TTAA 5 cut(s) 222, 488, 1515, 2733, 3231
TseFI GTSAC 7 cut(s) 34, 1810, 1843, 2071, 2306, 2447, 2809
TseI GCWGC 6 cut(s) 591, 678, 1457, 2489, 2492, 2880
Tsp45I GTSAC 7 cut(s) 34, 1810, 1843, 2071, 2306, 2447, 2809
TspGWI ACGGA 3 cut(s) 126, 2591, 3209
Tth111I GACNNNGTC 1 cut(s) 1563
Van91I CCANNNNNTGG 2 cut(s) 785, 2422
VpaK11BI GGWCC 1 cut(s) 178
VspI ATTAAT 1 cut(s) 1515
XapI RAATTY 8 cut(s) 159, 297, 330, 1525, 2614, 3088, 3577, 3650
XceI RCATGY 1 cut(s) 2801
XmiI GTMKAC 5 cut(s) 243, 450, 1558, 2630, 3588
XmnI GAANNNNTTC 6 cut(s) 697, 1699, 1713, 3024, 3280, 3654
ZraI GACGTC 1 cut(s) 34
ZrmI AGTACT 1 cut(s) 1342
Zsp2I ATGCAT 1 cut(s) 3076
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.