Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0011481

Physical Location & Seq

Genomic Coordinates Forward (+)

27800848 .. 27804080

Gene Structure 3233 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g26410.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1812 bp

ATGCTCGAGATTCTGGCCCGGAATCACATGGTGAGGTCGGCTTATTGGGTCGTTGAGAAAGTAACCTCTTTAGATATGACACGCGCCGTCGCGAGTGTCTTCATTCGGGACTACGTGTTTGCCAGAGTCTCGGATGGGCTGCTTGATTTAATTCTATTCGTTTGCGCTAAGAAGCTGTTGCTAGAGCAATGCTTGTCGATTTTTGATGATATGATAAGGAATGGTGTGGTGCCGGATGTGACTAACTGTAATAGGATTGTTAGGATGCTGAGAGATAAGGGAATGGGAGGTAGAGCTAAGCAGGTTTATAGGATGATGTGCGAGGCCGGGATTAAGCCTACTATTGTTACGTATAATACTATGTTGGATTTGTTCTGCAAGCAAGGGGATGTGCGGGAGGCGGTTGGCCTTGTGTCGGAGATGCAGAAGGTAGGGTGTGTTCCGAATGATGTGACGTATAATGTGTTGATCAGCGGGTTGGCCAAGAAAGGGGAGATGGAGGAGGCCGTGGGACTGATGCAGGATATGGTCAAGGCCGGGTTGAGGGCTTCCGCGTATACGTATAACTCTTTGATTTGTGAGTATTGCAAGAGAGGAATGCTTGAGGAGGCGTTGAGTCTTTGGGAAGAGATGGAGGCTAGAGGAGCCGCTCCTACTGTGGTTACGTATAACTCGATAATATATGGTCTCTGCAAGTGGAGCAGAGTTACTGAAGCCAAGGATTGGTTTGAGGATATGTTAAAGAGACGAATGTCTCCTGATATAGTTTCGTACAACACTCTTATATGTGGGTTTTGTAGGTTAGGGGACATATGGAATGCTTTTCTACTGTTTGATGAGTTGAGACACAGGGGTCTCGCGCCTACTGTCGTTACTTTTAATACACTCATGGATGGTCTATGCAGATTAGGGGAGTTCGAGTTTGCTCTGCAGCTAAAAAAAGAAATGGTCAATCAAGGAGTTTCCCCTGATGTTTTTACGTATACTATTCTTGTAAACAGATACTGCAAGGCAGGAAATTTATCAAAGGCCAGGGAGTTATTTGACGAGATGTTGCATAACGGACTGGAGCCGGATCGCTTTGCGTATAATACTCGAATAGTGGGGGAATTGGATCTTGGTGATCCATCAAAGGCATTCAATATGCAAGAAGAGATGCAAGCAAAGGGCTTGCCTCCTGATTTGTTCATATATAATGTTTTTGTGGATGTAATATGTAAATTGGGCAACTTGAAGGAAGCATATATCTTGGTGCAGAAAATGATACATAACGATCTTGTTCCAGATCATGTAATATTCACTAGCATCATTCATGCTTACCTGGTAAATGGCCGTCTCAGGAAGGCTAGAGAGGTATTTGATGAGATGCTGAGCAAAGACATACTTCCCTCAGTTGTAACTTATACAATAATGATCCATGCTCATGCCGCTAAGGGGAAACTGGAACTAGCGTCCATGTACTTTTCAGAGATGCAAGAGAAGCGTGTTTTGCCAAATGTTGTAACCTACAATGCTCTGATAAATGGTCTTTGTAAAGTTATGAGAATGGGCCAGGCTTACGAGTTCTTTACTCAGATGGAGGAAAAGGGTATACTTCCAAATAAGTATACATACACTATTCTAATAAATGAGAACTGCAACATTGGCAATTGGGAGGAGGCTTTGAGATTGTACAAACAGATGCTTGACAGAGAGATCGAGCCCGACTTTTGTACACACAGTGCACTGTTTAAGCAACTACACAGAGACTATGAACTGCATGCAGTTCGTTGCCTTGAGAGTTTAATTCTTGCCACAGAAGAATCTAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

604

Amino Acids

68.93

Weight (kDa)

5.89

Isoelectric Point (pI)

28.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	58 - 166	1.9e-08	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	66 - 126	6.9e-10	Pentatricopeptide repeat domain
PPR_2	PF13041	78 - 127	1.8e-08	PPR repeat family
PPR_1	PF12854	110 - 142	1.1e-11	PPR repeat
PPR_2	PF13041	113 - 162	1.6e-19	PPR repeat family
PPR	PF01535	116 - 146	1.7e-08	PPR repeat
PPR_3	PF13812	117 - 158	2.4e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	145 - 177	3.3e-10	PPR repeat
PPR_2	PF13041	148 - 197	6e-16	PPR repeat family
PPR	PF01535	151 - 181	1.3e-08	PPR repeat
PPR_long	PF17177	160 - 294	3e-06	Pentacotripeptide-repeat region of PRORP
TPR_24	PF23276	163 - 280	3.3e-07	Fungal tetratrico peptide repeats
PPR_3	PF13812	172 - 227	1.5e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	180 - 212	1.1e-09	PPR repeat
PPR_2	PF13041	185 - 232	2.1e-17	PPR repeat family
PPR	PF01535	186 - 215	3.7e-09	PPR repeat
PPR_1	PF12854	214 - 246	1.5e-07	PPR repeat
PPR_2	PF13041	218 - 267	4.7e-16	PPR repeat family
PPR	PF01535	221 - 250	1.2e-06	PPR repeat
PPR_3	PF13812	243 - 298	2.4e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	251 - 281	7.6e-11	PPR repeat
PPR_2	PF13041	253 - 302	7.7e-17	PPR repeat family
PPR	PF01535	256 - 286	8.8e-07	PPR repeat
PPR_1	PF12854	284 - 317	1.6e-09	PPR repeat
PPR_2	PF13041	288 - 337	8.1e-18	PPR repeat family
PPR	PF01535	291 - 321	9e-07	PPR repeat
PPR_3	PF13812	312 - 365	2e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	320 - 351	6.9e-14	PPR repeat
PPR	PF01535	326 - 356	1.8e-08	PPR repeat
PPR_2	PF13041	331 - 365	5.6e-08	PPR repeat family
PPR_1	PF12854	389 - 421	8.4e-06	PPR repeat
PPR_3	PF13812	417 - 468	3.3e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	425 - 456	6.8e-06	PPR repeat
PPR_2	PF13041	428 - 476	2.7e-14	PPR repeat family
PPR	PF01535	431 - 461	1.5e-06	PPR repeat
PPR_long	PF17177	443 - 556	5.9e-11	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	453 - 508	2.7e-14	Pentatricopeptide repeat domain
PPR_2	PF13041	463 - 512	1.5e-17	PPR repeat family
PPR	PF01535	466 - 495	4.9e-06	PPR repeat
PPR_1	PF12854	495 - 527	1e-11	PPR repeat
PPR_2	PF13041	498 - 547	2.6e-19	PPR repeat family
PPR	PF01535	501 - 531	6.6e-07	PPR repeat
PPR_3	PF13812	523 - 578	1.7e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	529 - 561	1.2e-07	PPR repeat
PPR_2	PF13041	542 - 581	5e-07	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0011481)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22960 AT1G22960
fragaria_vesca	FvH4_4g26410
malus_domestica	MD13G1032800.v1.1 MD16G1034800.v1.1
pyrus_communis	pycom13g02830 pycom16g02960
rosa_chinensis	RchiOBHm_Chr4g0434041
rosa_laevigata	RLG00000006706
rosa_multiflora	Rmu_co8498505.1_g000001 Rmu_sc0000352.1_g000026
rosa_roxburghii	Rroxscaffold_5G00375450
rosa_rugosa	Rorug04G0272900
rosa_samantha	Rh4AG328600 Rh4BG335900 Rh4CG351400 Rh4DG332300 Rh5AG231100 Rh5BG086200
rosa_wichuraiana	Rw4G028490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	852
Acc36I	ACCTGC	1 cut(s)	292
AccB1I	GGYRCC	1 cut(s)	229
AccB7I	CCANNNNNTGG	1 cut(s)	723
AccBSI	CCGCTC	1 cut(s)	650
AccI	GTMKAC	4 cut(s)	557, 983, 1591, 1607
AccII	CGCG	4 cut(s)	84, 92, 554, 860
AciI	CCGC	6 cut(s)	394, 401, 474, 552, 648, 1428
AclWI	GGATC	4 cut(s)	1083, 1118, 1122, 1408
AcoI	YGGCCR	2 cut(s)	480, 1330
AcsI	RAATTY	1 cut(s)	1018
AcuI	CTGAAG	1 cut(s)	732
AdeI	CACNNNGTG	2 cut(s)	31, 1721
AfaI	GTAC	4 cut(s)	773, 1460, 1673, 1714
AfiI	CCNNNNNNNGG	5 cut(s)	415, 489, 543, 723, 1434
AflIII	ACRYGT	1 cut(s)	114
AgsI	TTSAA	2 cut(s)	1141, 1234
AjnI	CCWGG	3 cut(s)	1031, 1320, 1551
AjuI	GAANNNNNNNTTGG	2 cut(s)	1101, 1133
AluBI	AGCT	4 cut(s)	175, 296, 934, 1809
AluI	AGCT	4 cut(s)	175, 296, 934, 1809
Alw21I	GWGCWC	1 cut(s)	1726
Alw26I	GTCTC	8 cut(s)	133, 692, 739, 759, 838, 860, 1340, 1740
Alw44I	GTGCAC	1 cut(s)	1722
AlwI	GGATC	4 cut(s)	1083, 1118, 1122, 1408
AlwNI	CAGNNNCTG	1 cut(s)	1005
Ama87I	CYCGRG	1 cut(s)	5
AoxI	GGCC	9 cut(s)	15, 324, 406, 480, 504, 534, 1029, 1330, 1549
ApaLI	GTGCAC	1 cut(s)	1722
ApeKI	GCWGC	2 cut(s)	139, 931
ApoI	RAATTY	1 cut(s)	1018
ArsI	GACNNNNNNTTYG	2 cut(s)	101, 133
AspLEI	GCGC	3 cut(s)	86, 167, 862
AspS9I	GGNCC	2 cut(s)	16, 1549
AsuC2I	CCSGG	3 cut(s)	19, 328, 538
AsuHPI	GGTGA	2 cut(s)	43, 1133
AvaI	CYCGRG	1 cut(s)	5
BaeGI	GKGCMC	1 cut(s)	1726
BalI	TGGCCA	1 cut(s)	482
BanI	GGYRCC	1 cut(s)	229
BanII	GRGCYC	1 cut(s)	1704
BbsI	GAAGAC	1 cut(s)	91
Bbv12I	GWGCWC	1 cut(s)	1726
BbvI	GCAGC	2 cut(s)	126, 943
BccI	CCATC	6 cut(s)	128, 490, 625, 887, 1135, 1570
BceAI	ACGGC	3 cut(s)	71, 491, 1317
BcgI	CGANNNNNNTGC	2 cut(s)	1748, 1782
BciT130I	CCWGG	3 cut(s)	1033, 1322, 1553
BclI	TGATCA	1 cut(s)	468
BcnI	CCSGG	3 cut(s)	19, 328, 538
BcoDI	GTCTC	8 cut(s)	133, 692, 739, 759, 838, 860, 1340, 1740
BfaI	CTAG	7 cut(s)	182, 639, 1302, 1347, 1448, 1806, 1810
BfmI	CTRYAG	1 cut(s)	929
BfuAI	ACCTGC	1 cut(s)	292
BisI	GCNGC	4 cut(s)	140, 648, 932, 1428
BlpI	GCTNAGC	2 cut(s)	297, 1370
BlsI	GCNGC	4 cut(s)	141, 649, 933, 1429
Bme1390I	CCNGG	6 cut(s)	19, 328, 538, 1033, 1322, 1553
BmeT110I	CYCGRG	1 cut(s)	5
BmgT120I	GGNCC	2 cut(s)	16, 1549
BmiI	GGNNCC	3 cut(s)	231, 646, 1071
BmrFI	CCNGG	6 cut(s)	19, 328, 538, 1033, 1322, 1553
BmsI	GCATC	8 cut(s)	255, 411, 507, 1146, 1314, 1356, 1461, 1671
BoxI	GACNNNNGTC	1 cut(s)	751
BpiI	GAAGAC	1 cut(s)	91
BpmI	CTGGAG	1 cut(s)	1088
Bpu10I	CCTNAGC	1 cut(s)	1431
Bpu1102I	GCTNAGC	2 cut(s)	297, 1370
BpuEI	CTTGAG	2 cut(s)	623, 1796
BpuMI	CCSGG	3 cut(s)	19, 328, 538
BsaAI	YACGTR	5 cut(s)	115, 351, 561, 666, 981
BsaI	GGTCTC	2 cut(s)	692, 860
BsaJI	CCNNGG	3 cut(s)	507, 717, 1032
BsaXI	ACNNNNNCTCC	2 cut(s)	905, 935
Bsc4I	CCNNNNNNNGG	5 cut(s)	415, 489, 543, 723, 1434
Bse1I	ACTGG	2 cut(s)	1071, 1446
Bse3DI	GCAATG	1 cut(s)	194
BseBI	CCWGG	3 cut(s)	1033, 1322, 1553
BseDI	CCNNGG	3 cut(s)	507, 717, 1032
BseGI	GGATG	7 cut(s)	139, 241, 270, 318, 394, 898, 1213
BseLI	CCNNNNNNNGG	5 cut(s)	415, 489, 543, 723, 1434
BseMI	GCAATG	1 cut(s)	194
BseMII	CTCAG	5 cut(s)	260, 1351, 1361, 1404, 1586
BseNI	ACTGG	2 cut(s)	1071, 1446
BseRI	GAGGAG	4 cut(s)	515, 620, 657, 1670
BseSI	GKGCMC	1 cut(s)	1726
BseXI	GCAGC	2 cut(s)	126, 943
BsgI	GTGCAG	1 cut(s)	1274
Bsh1236I	CGCG	4 cut(s)	84, 92, 554, 860
BshFI	GGCC	9 cut(s)	17, 326, 408, 482, 506, 536, 1031, 1332, 1551
BshNI	GGYRCC	1 cut(s)	229
BsiHKAI	GWGCWC	1 cut(s)	1726
BsiHKCI	CYCGRG	1 cut(s)	5
BsiSI	CCGG	5 cut(s)	19, 233, 327, 537, 1073
BslFI	GGGAC	3 cut(s)	122, 525, 821
BslI	CCNNNNNNNGG	5 cut(s)	415, 489, 543, 723, 1434
BsmAI	GTCTC	8 cut(s)	133, 692, 739, 759, 838, 860, 1340, 1740
BsmBI	CGTCTC	2 cut(s)	739, 1340
BsmFI	GGGAC	3 cut(s)	122, 525, 821
BsmI	GAATGC	3 cut(s)	603, 823, 1136
BsnI	GGCC	9 cut(s)	17, 326, 408, 482, 506, 536, 1031, 1332, 1551
Bso31I	GGTCTC	2 cut(s)	692, 860
BsoBI	CYCGRG	1 cut(s)	5
Bsp1286I	GDGCHC	2 cut(s)	1704, 1726
Bsp1407I	TGTACA	2 cut(s)	1671, 1712
Bsp143I	GATC	8 cut(s)	468, 1075, 1114, 1123, 1273, 1285, 1413, 1695
Bsp1720I	GCTNAGC	2 cut(s)	297, 1370
Bsp68I	TCGCGA	1 cut(s)	92
BspACI	CCGC	6 cut(s)	394, 401, 474, 552, 648, 1428
BspANI	GGCC	9 cut(s)	17, 326, 408, 482, 506, 536, 1031, 1332, 1551
BspCNI	CTCAG	5 cut(s)	261, 1350, 1362, 1403, 1585
BspFNI	CGCG	4 cut(s)	84, 92, 554, 860
BspLI	GGNNCC	3 cut(s)	231, 646, 1071
BspMAI	CTGCAG	1 cut(s)	933
BspMI	ACCTGC	1 cut(s)	292
BspPI	GGATC	4 cut(s)	1083, 1118, 1122, 1408
BspT107I	GGYRCC	1 cut(s)	229
BspTNI	GGTCTC	2 cut(s)	692, 860
BsrBI	CCGCTC	1 cut(s)	650
BsrDI	GCAATG	1 cut(s)	194
BsrGI	TGTACA	2 cut(s)	1671, 1712
BsrI	ACTGG	2 cut(s)	1071, 1446
BssECI	CCNNGG	3 cut(s)	507, 717, 1032
BssMI	GATC	8 cut(s)	468, 1075, 1114, 1123, 1273, 1285, 1413, 1695
BssNAI	GTATAC	4 cut(s)	558, 984, 1592, 1608
BssT1I	CCWWGG	1 cut(s)	717
Bst1107I	GTATAC	4 cut(s)	558, 984, 1592, 1608
Bst2UI	CCWGG	3 cut(s)	1033, 1322, 1553
Bst4CI	ACNGT	6 cut(s)	248, 658, 831, 868, 1721, 1728
Bst6I	CTCTTC	2 cut(s)	621, 1146
BstAUI	TGTACA	2 cut(s)	1671, 1712
BstBAI	YACGTR	5 cut(s)	115, 351, 561, 666, 981
BstC8I	GCNNGC	4 cut(s)	380, 1161, 1172, 1761
BstDEI	CTNAG	8 cut(s)	168, 269, 297, 1337, 1370, 1390, 1431, 1572
BstDSI	CCRYGG	1 cut(s)	507
BstF5I	GGATG	7 cut(s)	139, 241, 270, 318, 394, 898, 1213
BstFNI	CGCG	4 cut(s)	84, 92, 554, 860
BstHHI	GCGC	3 cut(s)	86, 167, 862
BstKTI	GATC	8 cut(s)	471, 1078, 1117, 1126, 1276, 1288, 1416, 1698
BstMAI	GTCTC	8 cut(s)	133, 692, 739, 759, 838, 860, 1340, 1740
BstMBI	GATC	8 cut(s)	468, 1075, 1114, 1123, 1273, 1285, 1413, 1695
BstMWI	GCNNNNNNNGC	6 cut(s)	644, 699, 1427, 1480, 1489, 1644
BstNI	CCWGG	3 cut(s)	1033, 1322, 1553
BstNSI	RCATGY	1 cut(s)	1763
BstPAI	GACNNNNGTC	1 cut(s)	751
BstSCI	CCNGG	6 cut(s)	17, 326, 536, 1031, 1320, 1551
BstSFI	CTRYAG	1 cut(s)	929
BstSLI	GKGCMC	1 cut(s)	1726
BstSNI	TACGTA	4 cut(s)	351, 561, 666, 981
BstUI	CGCG	4 cut(s)	84, 92, 554, 860
BstV1I	GCAGC	2 cut(s)	126, 943
BstV2I	GAAGAC	1 cut(s)	91
BstX2I	RGATCY	1 cut(s)	1114
BstYI	RGATCY	1 cut(s)	1114
BstZ17I	GTATAC	4 cut(s)	558, 984, 1592, 1608
BsuRI	GGCC	9 cut(s)	17, 326, 408, 482, 506, 536, 1031, 1332, 1551
BtgI	CCRYGG	1 cut(s)	507
BtsCI	GGATG	7 cut(s)	139, 241, 270, 318, 394, 898, 1213
BtsIMutI	CAGTG	2 cut(s)	1724, 1726
BtuMI	TCGCGA	1 cut(s)	92
BveI	ACCTGC	1 cut(s)	292
Cac8I	GCNNGC	4 cut(s)	380, 1161, 1172, 1761
CaiI	CAGNNNCTG	1 cut(s)	1005
CfoI	GCGC	3 cut(s)	86, 167, 862
Cfr13I	GGNCC	2 cut(s)	16, 1549
CseI	GACGC	1 cut(s)	1440
CsiI	ACCWGGT	1 cut(s)	1320
Csp6I	GTAC	4 cut(s)	772, 1459, 1672, 1713
CviAII	CATG	8 cut(s)	28, 889, 1289, 1313, 1418, 1424, 1456, 1760
CviQI	GTAC	4 cut(s)	772, 1459, 1672, 1713
DdeI	CTNAG	8 cut(s)	168, 269, 297, 1337, 1370, 1390, 1431, 1572
DpnI	GATC	8 cut(s)	470, 1077, 1116, 1125, 1275, 1287, 1415, 1697
DpnII	GATC	8 cut(s)	468, 1075, 1114, 1123, 1273, 1285, 1413, 1695
DraIII	CACNNNGTG	2 cut(s)	31, 1721
DrdI	GACNNNNNNGTC	1 cut(s)	852
DseDI	GACNNNNNNGTC	1 cut(s)	852
EaeI	YGGCCR	2 cut(s)	480, 1330
Eam1104I	CTCTTC	2 cut(s)	621, 1146
EarI	CTCTTC	2 cut(s)	621, 1146
Eco105I	TACGTA	4 cut(s)	351, 561, 666, 981
Eco130I	CCWWGG	1 cut(s)	717
Eco24I	GRGCYC	1 cut(s)	1704
Eco31I	GGTCTC	2 cut(s)	692, 860
Eco57I	CTGAAG	1 cut(s)	732
Eco88I	CYCGRG	1 cut(s)	5
EcoRII	CCWGG	3 cut(s)	1031, 1320, 1551
EcoT14I	CCWWGG	1 cut(s)	717
EcoT38I	GRGCYC	1 cut(s)	1704
ErhI	CCWWGG	1 cut(s)	717
Esp3I	CGTCTC	2 cut(s)	739, 1340
FaeI	CATG	8 cut(s)	31, 892, 1292, 1316, 1421, 1427, 1459, 1763
FalI	AAGNNNNNCTT	2 cut(s)	1368, 1400
FaqI	GGGAC	3 cut(s)	122, 525, 821
FatI	CATG	8 cut(s)	27, 888, 1288, 1312, 1417, 1423, 1455, 1759
FauI	CCCGC	2 cut(s)	387, 467
FauNDI	CATATG	1 cut(s)	812
FbaI	TGATCA	1 cut(s)	468
FblI	GTMKAC	4 cut(s)	557, 983, 1591, 1607
Fnu4HI	GCNGC	4 cut(s)	140, 648, 932, 1428
FokI	GGATG	7 cut(s)	146, 248, 277, 325, 401, 905, 1220
FriOI	GRGCYC	1 cut(s)	1704
Fsp4HI	GCNGC	4 cut(s)	140, 648, 932, 1428
FspBI	CTAG	7 cut(s)	182, 639, 1302, 1347, 1448, 1806, 1810
GlaI	GCGC	3 cut(s)	85, 166, 861
GluI	GCNGC	4 cut(s)	140, 648, 932, 1428
GsuI	CTGGAG	1 cut(s)	1088
HaeIII	GGCC	9 cut(s)	17, 326, 408, 482, 506, 536, 1031, 1332, 1551
HapII	CCGG	5 cut(s)	19, 233, 327, 537, 1073
HgaI	GACGC	1 cut(s)	1440
HhaI	GCGC	3 cut(s)	86, 167, 862
Hin1II	CATG	8 cut(s)	31, 892, 1292, 1316, 1421, 1427, 1459, 1763
Hin6I	GCGC	3 cut(s)	84, 165, 860
HinP1I	GCGC	3 cut(s)	84, 165, 860
HinfI	GANTC	5 cut(s)	10, 22, 126, 616, 1802
HpaII	CCGG	5 cut(s)	19, 233, 327, 537, 1073
HphI	GGTGA	2 cut(s)	43, 1133
Hpy166II	GTNNAC	7 cut(s)	558, 984, 997, 1592, 1608, 1715, 1724
Hpy188I	TCNGA	6 cut(s)	133, 418, 444, 1468, 1518, 1575
Hpy188III	TCNNGA	7 cut(s)	7, 91, 107, 758, 1178, 1283, 1339
Hpy8I	GTNNAC	7 cut(s)	558, 984, 997, 1592, 1608, 1715, 1724
Hpy99I	CGWCG	1 cut(s)	92
HpyAV	CCTTC	3 cut(s)	421, 1228, 1336
HpyCH4III	ACNGT	6 cut(s)	248, 658, 831, 868, 1721, 1728
HpyCH4IV	ACGT	6 cut(s)	114, 350, 455, 560, 665, 980
HpyF10VI	GCNNNNNNNGC	6 cut(s)	644, 699, 1427, 1480, 1489, 1644
HpyF3I	CTNAG	8 cut(s)	168, 269, 297, 1337, 1370, 1390, 1431, 1572
HpySE526I	ACGT	6 cut(s)	114, 350, 455, 560, 665, 980
Hsp92II	CATG	8 cut(s)	31, 892, 1292, 1316, 1421, 1427, 1459, 1763
HspAI	GCGC	3 cut(s)	84, 165, 860
Ksp22I	TGATCA	1 cut(s)	468
Kzo9I	GATC	8 cut(s)	468, 1075, 1114, 1123, 1273, 1285, 1413, 1695
LmnI	GCTCC	4 cut(s)	644, 655, 699, 1069
Lsp1109I	GCAGC	2 cut(s)	126, 943
LweI	GCATC	8 cut(s)	255, 411, 507, 1146, 1314, 1356, 1461, 1671
MabI	ACCWGGT	1 cut(s)	1320
MaeI	CTAG	7 cut(s)	182, 639, 1302, 1347, 1448, 1806, 1810
MaeII	ACGT	6 cut(s)	114, 350, 455, 560, 665, 980
MaeIII	GTNAC	9 cut(s)	61, 238, 346, 451, 661, 706, 871, 1396, 1501
MalI	GATC	8 cut(s)	470, 1077, 1116, 1125, 1275, 1287, 1415, 1697
MbiI	CCGCTC	1 cut(s)	650
MboI	GATC	8 cut(s)	468, 1075, 1114, 1123, 1273, 1285, 1413, 1695
MboII	GAAGA	4 cut(s)	91, 638, 1163, 1811
MfeI	CAATTG	1 cut(s)	1648
MflI	RGATCY	1 cut(s)	1114
MhlI	GDGCHC	2 cut(s)	1704, 1726
MlsI	TGGCCA	1 cut(s)	482
MluCI	AATT	6 cut(s)	150, 1018, 1109, 1220, 1648, 1785
MluNI	TGGCCA	1 cut(s)	482
MlyI	GAGTC	2 cut(s)	135, 625
MmeI	TCCRAC	2 cut(s)	345, 396
Mox20I	TGGCCA	1 cut(s)	482
MscI	TGGCCA	1 cut(s)	482
MseI	TTAA	6 cut(s)	149, 333, 740, 879, 1731, 1784
MslI	CAYNNNNRTG	1 cut(s)	1422
Msp20I	TGGCCA	1 cut(s)	482
MspA1I	CMGCKG	1 cut(s)	474
MspI	CCGG	5 cut(s)	19, 233, 327, 537, 1073
MspR9I	CCNGG	6 cut(s)	19, 328, 538, 1033, 1322, 1553
MunI	CAATTG	1 cut(s)	1648
Mva1269I	GAATGC	3 cut(s)	603, 823, 1136
MvaI	CCWGG	3 cut(s)	1033, 1322, 1553
MvnI	CGCG	4 cut(s)	84, 92, 554, 860
MwoI	GCNNNNNNNGC	6 cut(s)	644, 699, 1427, 1480, 1489, 1644
NciI	CCSGG	3 cut(s)	19, 328, 538
NdeI	CATATG	1 cut(s)	812
NdeII	GATC	8 cut(s)	468, 1075, 1114, 1123, 1273, 1285, 1413, 1695
NlaIII	CATG	8 cut(s)	31, 892, 1292, 1316, 1421, 1427, 1459, 1763
NlaIV	GGNNCC	3 cut(s)	231, 646, 1071
NmuCI	GTSAC	2 cut(s)	238, 451
NruI	TCGCGA	1 cut(s)	92
NspI	RCATGY	1 cut(s)	1763
PaeI	GCATGC	1 cut(s)	1763
PaeR7I	CTCGAG	1 cut(s)	5
PcsI	WCGNNNNNNNCGW	1 cut(s)	671
PctI	GAATGC	3 cut(s)	603, 823, 1136
PfeI	GAWTC	3 cut(s)	10, 22, 1802
PflMI	CCANNNNNTGG	1 cut(s)	723
PkrI	GCNGC	4 cut(s)	141, 649, 933, 1429
PleI	GAGTC	2 cut(s)	134, 624
PpsI	GAGTC	2 cut(s)	134, 624
Ppu21I	YACGTR	5 cut(s)	115, 351, 561, 666, 981
PshAI	GACNNNNGTC	1 cut(s)	751
Psp6I	CCWGG	3 cut(s)	1031, 1320, 1551
PspGI	CCWGG	3 cut(s)	1031, 1320, 1551
PspN4I	GGNNCC	3 cut(s)	231, 646, 1071
PspPI	GGNCC	2 cut(s)	16, 1549
PsrI	GAACNNNNNNTAC	2 cut(s)	423, 455
PstI	CTGCAG	1 cut(s)	933
PstNI	CAGNNNCTG	1 cut(s)	1005
PsuI	RGATCY	1 cut(s)	1114
RruI	TCGCGA	1 cut(s)	92
RsaI	GTAC	4 cut(s)	773, 1460, 1673, 1714
RsaNI	GTAC	4 cut(s)	772, 1459, 1672, 1713
RseI	CAYNNNNRTG	1 cut(s)	1422
SaqAI	TTAA	6 cut(s)	149, 333, 740, 879, 1731, 1784
SatI	GCNGC	4 cut(s)	140, 648, 932, 1428
Sau3AI	GATC	8 cut(s)	468, 1075, 1114, 1123, 1273, 1285, 1413, 1695
Sau96I	GGNCC	2 cut(s)	16, 1549
SchI	GAGTC	2 cut(s)	135, 625
ScrFI	CCNGG	6 cut(s)	19, 328, 538, 1033, 1322, 1553
SduI	GDGCHC	2 cut(s)	1704, 1726
SexAI	ACCWGGT	1 cut(s)	1320
SfaNI	GCATC	8 cut(s)	255, 411, 507, 1146, 1314, 1356, 1461, 1671
SfcI	CTRYAG	1 cut(s)	929
Sfr274I	CTCGAG	1 cut(s)	5
SlaI	CTCGAG	1 cut(s)	5
SmiMI	CAYNNNNRTG	1 cut(s)	1422
SmlI	CTYRAG	3 cut(s)	5, 602, 1775
SmoI	CTYRAG	3 cut(s)	5, 602, 1775
SnaBI	TACGTA	4 cut(s)	351, 561, 666, 981
SphI	GCATGC	1 cut(s)	1763
Sse9I	AATT	6 cut(s)	150, 1018, 1109, 1220, 1648, 1785
SsiI	CCGC	6 cut(s)	394, 401, 474, 552, 648, 1428
SspI	AATATT	1 cut(s)	1296
SspMI	CTAG	7 cut(s)	182, 639, 1302, 1347, 1448, 1806, 1810
StyD4I	CCNGG	6 cut(s)	17, 326, 536, 1031, 1320, 1551
StyI	CCWWGG	1 cut(s)	717
TaaI	ACNGT	6 cut(s)	248, 658, 831, 868, 1721, 1728
TaiI	ACGT	6 cut(s)	117, 353, 458, 563, 668, 983
TaqI	TCGA	6 cut(s)	6, 197, 674, 918, 1096, 1698
TasI	AATT	6 cut(s)	150, 1018, 1109, 1220, 1648, 1785
TatI	WGTACW	3 cut(s)	1458, 1671, 1712
TauI	GCSGC	2 cut(s)	650, 1430
TfiI	GAWTC	3 cut(s)	10, 22, 1802
Tru1I	TTAA	6 cut(s)	149, 333, 740, 879, 1731, 1784
Tru9I	TTAA	6 cut(s)	149, 333, 740, 879, 1731, 1784
TscAI	CASTG	2 cut(s)	1726, 1731
TseFI	GTSAC	2 cut(s)	238, 451
TseI	GCWGC	2 cut(s)	139, 931
Tsp45I	GTSAC	2 cut(s)	238, 451
TspDTI	ATGAA	4 cut(s)	91, 1177, 1301, 1767
TspGWI	ACGGA	1 cut(s)	1077
TspRI	CASTG	2 cut(s)	1726, 1731
Van91I	CCANNNNNTGG	1 cut(s)	723
VneI	GTGCAC	1 cut(s)	1722
XapI	RAATTY	1 cut(s)	1018
XceI	RCATGY	1 cut(s)	1763
XhoI	CTCGAG	1 cut(s)	5
XmiI	GTMKAC	4 cut(s)	557, 983, 1591, 1607
XspI	CTAG	7 cut(s)	182, 639, 1302, 1347, 1448, 1806, 1810

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.