Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000352.1

Orthogroup ID

OG0011481

Physical Location & Seq

Genomic Coordinates Forward (+)

102699 .. 104846

Gene Structure 2148 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000352.1_g000026.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2148 bp

atgaccctctgcgccagagcttctaaagctttcaaggtacgcctccctcctctacccctctcctcctcctccttccactccccttccctccccgccacgtcacctctctcggacacccactaccgcgacctcatcttctccaccatccgaacaaccccctcagctttccgcacccgcggctggtcctcccaccgcttccgccccgtgatttccgacccggacctcttcgtccgcgtcctcgcccagattcgggccaggcccaccgtcgccctccggttcttccgatgggccgaggcccagccggaggttaagcggtccgagtttgtcttctgcgtcattctcgagattctggcccaccacaacatgatgaggtctgcgtattgggtgatggagagagtgattagtgtagatatgcatcatggcattgtggatgttttgattggtgagtatgttttcgcaaaggtctccatcaagctgcttgatctcttgttgtgggtgtgcgccaacaagttgttggtggagcaatgcttgtccattttcgataagatgataaccagtgggttgttgccggatgtgaataactgtaataggcttcttaggatgcttagggataggaaccttgcgagtagagctcaagaggtttataggaggatggctgaggccgggatcaagcccaccattgttacttacaataccatgctggattccttttgcaagcaagggcaagtgcagcaggcgcttcaccttgtctcggagatgcagaaggtggagtgcttcccgaacgatgtgacctacaatgtgttgatcaatggcttgtcgaagaaagggaaactggagcaggccgagggactgttgcaagatatgttgaagtccggattgagggcttcagcgtacacgtataaccctttgatttgtgggtattgcaagaggggactgcttgcggaggcattgaatctcggggaagagatggcggcaagaggagccgctcctactgtggctacttataactcgataatgtatggcctctgcaagtggggcagagttactgaggccagggactggtttactgatatgttaaacaaacgattgtcgcctgatatagtttcatacaacactcttatatatgggtactgtaggttaggggacatatggaatgcttttctactgtttgatgagttaagacggagagctctcactcctactgtcgttacttataatacactcatggatggtctatgcagattgggggagttcgaggttgctcagcagcttaaaaaagaaatggtcaatcaaggaattttccctgatgtttttacatatactattcttgtaaatggatattgcaaggcaggaaatttatcaaaggccagggagttctttgatgagatgttgcataacggactggagccggatcgctttgcatacaatactcgaatggtgggggaattggatcttggtgacccatccaaggcatttaatatgcaagaagaaatgctagcaaagggtttgcctcctgatttgttcacatataatgtttttgtggatggagtatgtaaattgggcaacttgagtgaagcatataacatgttgcagaaaatggtacatgatggtctcgtgccagatcatgtaacatacactagcatcattcatgcttacctggtaagtggccgcctcaggaaggctagagaggtatatgatgagatgctgagcaaagacgtgcatccctcagttgtaacttatacagtactgattcatgctcatgcatctaaggggagactggaactagcatatatgtacttctcagagatgcaagagaagcgtgttctgccaaatgttgttacctacaatgctctgataaatggtctttgtaaagttatgagaatggaccaggcttacgagttctttactcatatggaggaaaagggtatacttccaaataagtatacatacactattctaataaatgagaactgcaacatcggcaattggaaggaggctttgagattgtacaaacagatgcttgacagagagattgagcctgacttttgtacgcacagtgcactttttaagcaactagacagagactataaactgcatgcggttcattgccttgagagtttaattcttgccacagaagaatctagctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

715

Amino Acids

81.78

Weight (kDa)

8.15

Isoelectric Point (pI)

35.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011481)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22960 AT1G22960
fragaria_vesca	FvH4_4g26410
malus_domestica	MD13G1032800.v1.1 MD16G1034800.v1.1
pyrus_communis	pycom13g02830 pycom16g02960
rosa_chinensis	RchiOBHm_Chr4g0434041
rosa_laevigata	RLG00000006706
rosa_multiflora	Rmu_co8498505.1_g000001 Rmu_sc0000352.1_g000026
rosa_roxburghii	Rroxscaffold_5G00375450
rosa_rugosa	Rorug04G0272900
rosa_samantha	Rh4AG328600 Rh4BG335900 Rh4CG351400 Rh4DG332300 Rh5AG231100 Rh5BG086200
rosa_wichuraiana	Rw4G028490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1005, 1215
AasI	GACNNNNNNGTC	1 cut(s)	227
AccB7I	CCANNNNNTGG	1 cut(s)	1059
AccBSI	CCGCTC	1 cut(s)	986
AccI	GTMKAC	2 cut(s)	1927, 1943
AccII	CGCG	3 cut(s)	126, 177, 234
AccIII	TCCGGA	1 cut(s)	872
AclWI	GGATC	3 cut(s)	674, 1419, 1458
AcoI	YGGCCR	1 cut(s)	1666
AcsI	RAATTY	2 cut(s)	1296, 1354
AcuI	CTGAAG	1 cut(s)	870
AfaI	GTAC	8 cut(s)	39, 893, 1130, 1602, 1746, 1796, 2009, 2050
AfiI	CCNNNNNNNGG	9 cut(s)	180, 249, 250, 304, 751, 879, 1059, 1468, 1678
AflIII	ACRYGT	2 cut(s)	894, 1584
AgsI	TTSAA	3 cut(s)	34, 868, 952
AjiI	CACGTC	2 cut(s)	99, 1717
AjnI	CCWGG	5 cut(s)	254, 1052, 1367, 1656, 1887
AjuI	GAANNNNNNNTTGG	2 cut(s)	1437, 1469
AluBI	AGCT	8 cut(s)	20, 29, 164, 475, 632, 1190, 1270, 2145
AluI	AGCT	8 cut(s)	20, 29, 164, 475, 632, 1190, 1270, 2145
Alw21I	GWGCWC	3 cut(s)	634, 1192, 2062
Alw26I	GTCTC	5 cut(s)	469, 754, 1616, 1768, 2076
Alw44I	GTGCAC	1 cut(s)	2058
AlwI	GGATC	3 cut(s)	674, 1419, 1458
AlwNI	CAGNNNCTG	1 cut(s)	1059
Ama87I	CYCGRG	2 cut(s)	341, 956
Aor13HI	TCCGGA	1 cut(s)	872
ApaLI	GTGCAC	1 cut(s)	2058
ApeKI	GCWGC	3 cut(s)	475, 730, 1267
ApoI	RAATTY	2 cut(s)	1296, 1354
AspLEI	GCGC	3 cut(s)	14, 503, 739
AspS9I	GGNCC	9 cut(s)	183, 220, 252, 258, 288, 295, 315, 352, 1885
AsuC2I	CCSGG	2 cut(s)	218, 664
AsuHPI	GGTGA	5 cut(s)	93, 397, 455, 734, 1469
AsuNHI	GCTAGC	1 cut(s)	1495
AvaI	CYCGRG	2 cut(s)	341, 956
AvaII	GGWCC	4 cut(s)	183, 220, 315, 1885
AxyI	CCTNAGG	1 cut(s)	1673
BaeGI	GKGCMC	1 cut(s)	2062
BanII	GRGCYC	2 cut(s)	634, 1192
BauI	CACGAG	1 cut(s)	1613
BbsI	GAAGAC	1 cut(s)	319
Bbv12I	GWGCWC	3 cut(s)	634, 1192, 2062
BbvCI	CCTCAGC	2 cut(s)	160, 657
BbvI	GCAGC	3 cut(s)	462, 742, 1279
BciT130I	CCWGG	5 cut(s)	256, 1054, 1369, 1658, 1889
BclI	TGATCA	1 cut(s)	804
BcnI	CCSGG	2 cut(s)	218, 664
BcoDI	GTCTC	5 cut(s)	469, 754, 1616, 1768, 2076
BfaI	CTAG	7 cut(s)	1496, 1638, 1683, 1784, 2075, 2142, 2146
BfmI	CTRYAG	1 cut(s)	1132
BfoI	RGCGCY	1 cut(s)	740
BisI	GCNGC	7 cut(s)	178, 476, 731, 972, 984, 1268, 1669
BlpI	GCTNAGC	2 cut(s)	1263, 1706
BlsI	GCNGC	7 cut(s)	179, 477, 732, 973, 985, 1269, 1670
BmcAI	AGTACT	1 cut(s)	1746
Bme1390I	CCNGG	7 cut(s)	218, 256, 664, 1054, 1369, 1658, 1889
Bme18I	GGWCC	4 cut(s)	183, 220, 315, 1885
BmeT110I	CYCGRG	2 cut(s)	341, 956
BmgBI	CACGTC	2 cut(s)	99, 1717
BmgT120I	GGNCC	9 cut(s)	183, 220, 252, 258, 288, 295, 315, 352, 1885
BmiI	GGNNCC	3 cut(s)	617, 982, 1407
BmrFI	CCNGG	7 cut(s)	218, 256, 664, 1054, 1369, 1658, 1889
BmsI	GCATC	9 cut(s)	424, 591, 747, 1650, 1692, 1729, 1772, 1797, 2007
BmtI	GCTAGC	1 cut(s)	1499
BpiI	GAAGAC	1 cut(s)	319
BplI	GAGNNNNNCTC	2 cut(s)	616, 648
BpmI	CTGGAG	2 cut(s)	854, 1424
Bpu10I	CCTNAGC	3 cut(s)	160, 605, 657
Bpu1102I	GCTNAGC	2 cut(s)	1263, 1706
BpuEI	CTTGAG	3 cut(s)	618, 1588, 2132
BpuMI	CCSGG	2 cut(s)	218, 664
BsaAI	YACGTR	1 cut(s)	897
BsaBI	GATNNNNATC	1 cut(s)	414
BsaI	GGTCTC	2 cut(s)	469, 1616
BsaJI	CCNNGG	6 cut(s)	175, 291, 843, 1053, 1368, 1467
BsaWI	WCCGGW	2 cut(s)	273, 872
Bsc4I	CCNNNNNNNGG	9 cut(s)	180, 249, 250, 304, 751, 879, 1059, 1468, 1678
Bse1I	ACTGG	5 cut(s)	555, 837, 1064, 1407, 1782
Bse21I	CCTNAGG	1 cut(s)	1673
Bse3DI	GCAATG	2 cut(s)	530, 2104
Bse8I	GATNNNNATC	1 cut(s)	414
BseAI	TCCGGA	1 cut(s)	872
BseBI	CCWGG	5 cut(s)	256, 1054, 1369, 1658, 1889
BseDI	CCNNGG	6 cut(s)	175, 291, 843, 1053, 1368, 1467
BseGI	GGATG	9 cut(s)	144, 436, 577, 606, 657, 1234, 1463, 1549, 1720
BseJI	GATNNNNATC	1 cut(s)	414
BseLI	CCNNNNNNNGG	9 cut(s)	180, 249, 250, 304, 751, 879, 1059, 1468, 1678
BseMI	GCAATG	2 cut(s)	530, 2104
BseMII	CTCAG	8 cut(s)	174, 648, 1038, 1277, 1687, 1697, 1740, 1815
BseNI	ACTGG	5 cut(s)	555, 837, 1064, 1407, 1782
BseRI	GAGGAG	5 cut(s)	39, 52, 55, 58, 993
BseSI	GKGCMC	1 cut(s)	2062
BseXI	GCAGC	3 cut(s)	462, 742, 1279
BseYI	CCCAGC	1 cut(s)	297
BsgI	GTGCAG	1 cut(s)	749
Bsh1236I	CGCG	3 cut(s)	126, 177, 234
BsiHKAI	GWGCWC	3 cut(s)	634, 1192, 2062
BsiHKCI	CYCGRG	2 cut(s)	341, 956
BsiSI	CCGG	7 cut(s)	218, 274, 302, 569, 663, 873, 1409
BslFI	GGGAC	4 cut(s)	861, 945, 1070, 1157
BslI	CCNNNNNNNGG	9 cut(s)	180, 249, 250, 304, 751, 879, 1059, 1468, 1678
BsmAI	GTCTC	5 cut(s)	469, 754, 1616, 1768, 2076
BsmFI	GGGAC	4 cut(s)	861, 945, 1070, 1157
BsmI	GAATGC	1 cut(s)	1159
Bso31I	GGTCTC	2 cut(s)	469, 1616
BsoBI	CYCGRG	2 cut(s)	341, 956
Bsp1286I	GDGCHC	3 cut(s)	634, 1192, 2062
Bsp13I	TCCGGA	1 cut(s)	872
Bsp1407I	TGTACA	1 cut(s)	2007
Bsp143I	GATC	6 cut(s)	481, 666, 804, 1411, 1450, 1621
Bsp1720I	GCTNAGC	2 cut(s)	1263, 1706
BspCNI	CTCAG	8 cut(s)	173, 649, 1039, 1276, 1686, 1698, 1739, 1814
BspEI	TCCGGA	1 cut(s)	872
BspFNI	CGCG	3 cut(s)	126, 177, 234
BspLI	GGNNCC	3 cut(s)	617, 982, 1407
BspOI	GCTAGC	1 cut(s)	1499
BspPI	GGATC	3 cut(s)	674, 1419, 1458
BspTNI	GGTCTC	2 cut(s)	469, 1616
BsrBI	CCGCTC	1 cut(s)	986
BsrDI	GCAATG	2 cut(s)	530, 2104
BsrGI	TGTACA	1 cut(s)	2007
BsrI	ACTGG	5 cut(s)	555, 837, 1064, 1407, 1782
BssECI	CCNNGG	6 cut(s)	175, 291, 843, 1053, 1368, 1467
BssMI	GATC	6 cut(s)	481, 666, 804, 1411, 1450, 1621
BssNAI	GTATAC	2 cut(s)	1928, 1944
BssSI	CACGAG	1 cut(s)	1613
BssT1I	CCWWGG	1 cut(s)	1467
Bst1107I	GTATAC	2 cut(s)	1928, 1944
Bst2BI	CACGAG	1 cut(s)	1613
Bst2UI	CCWGG	5 cut(s)	256, 1054, 1369, 1658, 1889
Bst4CI	ACNGT	9 cut(s)	265, 584, 852, 994, 1133, 1167, 1204, 1744, 2057
Bst6I	CTCTTC	2 cut(s)	230, 957
BstAUI	TGTACA	1 cut(s)	2007
BstBAI	YACGTR	1 cut(s)	897
BstC8I	GCNNGC	6 cut(s)	716, 735, 840, 939, 1497, 2097
BstDSI	CCRYGG	1 cut(s)	175
BstEII	GGTNACC	1 cut(s)	1457
BstENI	CCTNNNNNAGG	1 cut(s)	1676
BstF5I	GGATG	9 cut(s)	144, 436, 577, 606, 657, 1234, 1463, 1549, 1720
BstFNI	CGCG	3 cut(s)	126, 177, 234
BstH2I	RGCGCY	1 cut(s)	740
BstHHI	GCGC	3 cut(s)	14, 503, 739
BstKTI	GATC	6 cut(s)	484, 669, 807, 1414, 1453, 1624
BstMAI	GTCTC	5 cut(s)	469, 754, 1616, 1768, 2076
BstMBI	GATC	6 cut(s)	481, 666, 804, 1411, 1450, 1621
BstNI	CCWGG	5 cut(s)	256, 1054, 1369, 1658, 1889
BstNSI	RCATGY	2 cut(s)	1588, 2099
BstPI	GGTNACC	1 cut(s)	1457
BstSCI	CCNGG	7 cut(s)	216, 254, 662, 1052, 1367, 1656, 1887
BstSFI	CTRYAG	1 cut(s)	1132
BstSLI	GKGCMC	1 cut(s)	2062
BstUI	CGCG	3 cut(s)	126, 177, 234
BstV1I	GCAGC	3 cut(s)	462, 742, 1279
BstV2I	GAAGAC	1 cut(s)	319
BstX2I	RGATCY	1 cut(s)	1450
BstYI	RGATCY	1 cut(s)	1450
BstZ17I	GTATAC	2 cut(s)	1928, 1944
Bsu36I	CCTNAGG	1 cut(s)	1673
BtgI	CCRYGG	1 cut(s)	175
BtrI	CACGTC	2 cut(s)	99, 1717
BtsCI	GGATG	9 cut(s)	144, 436, 577, 606, 657, 1234, 1463, 1549, 1720
BtsIMutI	CAGTG	2 cut(s)	562, 2062
Cac8I	GCNNGC	6 cut(s)	716, 735, 840, 939, 1497, 2097
CaiI	CAGNNNCTG	1 cut(s)	1059
CfoI	GCGC	3 cut(s)	14, 503, 739
Cfr13I	GGNCC	9 cut(s)	183, 220, 252, 258, 288, 295, 315, 352, 1885
Cfr42I	CCGCGG	1 cut(s)	178
CpoI	CGGWCCG	1 cut(s)	315
CseI	GACGC	2 cut(s)	223, 322
CsiI	ACCWGGT	1 cut(s)	1656
Csp6I	GTAC	8 cut(s)	38, 892, 1129, 1601, 1745, 1795, 2008, 2049
CspI	CGGWCCG	1 cut(s)	315
CviQI	GTAC	8 cut(s)	38, 892, 1129, 1601, 1745, 1795, 2008, 2049
DpnI	GATC	6 cut(s)	483, 668, 806, 1413, 1452, 1623
DpnII	GATC	6 cut(s)	481, 666, 804, 1411, 1450, 1621
DrdI	GACNNNNNNGTC	1 cut(s)	227
DseDI	GACNNNNNNGTC	1 cut(s)	227
EaeI	YGGCCR	1 cut(s)	1666
Eam1104I	CTCTTC	2 cut(s)	230, 957
EarI	CTCTTC	2 cut(s)	230, 957
EciI	GGCGGA	1 cut(s)	188
Ecl136II	GAGCTC	2 cut(s)	632, 1190
Eco130I	CCWWGG	1 cut(s)	1467
Eco24I	GRGCYC	2 cut(s)	634, 1192
Eco31I	GGTCTC	2 cut(s)	469, 1616
Eco47I	GGWCC	4 cut(s)	183, 220, 315, 1885
Eco53kI	GAGCTC	2 cut(s)	632, 1190
Eco57I	CTGAAG	1 cut(s)	870
Eco81I	CCTNAGG	1 cut(s)	1673
Eco88I	CYCGRG	2 cut(s)	341, 956
Eco91I	GGTNACC	1 cut(s)	1457
EcoICRI	GAGCTC	2 cut(s)	632, 1190
EcoNI	CCTNNNNNAGG	1 cut(s)	1676
EcoO65I	GGTNACC	1 cut(s)	1457
EcoRII	CCWGG	5 cut(s)	254, 1052, 1367, 1656, 1887
EcoT14I	CCWWGG	1 cut(s)	1467
EcoT22I	ATGCAT	2 cut(s)	417, 1765
EcoT38I	GRGCYC	2 cut(s)	634, 1192
ErhI	CCWWGG	1 cut(s)	1467
FaqI	GGGAC	4 cut(s)	861, 945, 1070, 1157
FauI	CCCGC	2 cut(s)	100, 182
FauNDI	CATATG	2 cut(s)	1148, 1911
FbaI	TGATCA	1 cut(s)	804
FblI	GTMKAC	2 cut(s)	1927, 1943
Fnu4HI	GCNGC	7 cut(s)	178, 476, 731, 972, 984, 1268, 1669
FokI	GGATG	9 cut(s)	131, 443, 584, 613, 664, 1241, 1450, 1556, 1707
FriOI	GRGCYC	2 cut(s)	634, 1192
Fsp4HI	GCNGC	7 cut(s)	178, 476, 731, 972, 984, 1268, 1669
FspBI	CTAG	7 cut(s)	1496, 1638, 1683, 1784, 2075, 2142, 2146
GlaI	GCGC	3 cut(s)	13, 502, 738
GluI	GCNGC	7 cut(s)	178, 476, 731, 972, 984, 1268, 1669
GsaI	CCCAGC	1 cut(s)	301
GsuI	CTGGAG	2 cut(s)	854, 1424
HaeII	RGCGCY	1 cut(s)	740
HapII	CCGG	7 cut(s)	218, 274, 302, 569, 663, 873, 1409
HgaI	GACGC	2 cut(s)	223, 322
HhaI	GCGC	3 cut(s)	14, 503, 739
Hin6I	GCGC	3 cut(s)	12, 501, 737
HinP1I	GCGC	3 cut(s)	12, 501, 737
HindIII	AAGCTT	1 cut(s)	27
HinfI	GANTC	6 cut(s)	247, 346, 704, 952, 1750, 2138
HpaII	CCGG	7 cut(s)	218, 274, 302, 569, 663, 873, 1409
HphI	GGTGA	5 cut(s)	93, 397, 455, 734, 1469
Hpy166II	GTNNAC	6 cut(s)	894, 1065, 1524, 1928, 1944, 2060
Hpy188I	TCNGA	8 cut(s)	112, 149, 214, 284, 319, 754, 1804, 1854
Hpy188III	TCNNGA	7 cut(s)	341, 343, 635, 778, 873, 1514, 1675
Hpy8I	GTNNAC	6 cut(s)	894, 1065, 1524, 1928, 1944, 2060
Hpy99I	CGWCG	1 cut(s)	269
HpyAV	CCTTC	5 cut(s)	82, 93, 757, 1672, 1984
HpyCH4III	ACNGT	9 cut(s)	265, 584, 852, 994, 1133, 1167, 1204, 1744, 2057
HpyCH4IV	ACGT	3 cut(s)	98, 896, 1716
HpySE526I	ACGT	3 cut(s)	98, 896, 1716
HspAI	GCGC	3 cut(s)	12, 501, 737
Kpn2I	TCCGGA	1 cut(s)	872
Ksp22I	TGATCA	1 cut(s)	804
KspI	CCGCGG	1 cut(s)	178
Kzo9I	GATC	6 cut(s)	481, 666, 804, 1411, 1450, 1621
LmnI	GCTCC	5 cut(s)	520, 835, 980, 991, 1405
Lsp1109I	GCAGC	3 cut(s)	462, 742, 1279
LweI	GCATC	9 cut(s)	424, 591, 747, 1650, 1692, 1729, 1772, 1797, 2007
MabI	ACCWGGT	1 cut(s)	1656
MaeI	CTAG	7 cut(s)	1496, 1638, 1683, 1784, 2075, 2142, 2146
MaeII	ACGT	3 cut(s)	98, 896, 1716
MaeIII	GTNAC	9 cut(s)	99, 682, 787, 1042, 1207, 1457, 1627, 1732, 1837
MalI	GATC	6 cut(s)	483, 668, 806, 1413, 1452, 1623
MbiI	CCGCTC	1 cut(s)	986
MboI	GATC	6 cut(s)	481, 666, 804, 1411, 1450, 1621
MboII	GAAGA	8 cut(s)	127, 217, 271, 319, 832, 974, 1499, 2147
MfeI	CAATTG	1 cut(s)	1984
MflI	RGATCY	1 cut(s)	1450
MhlI	GDGCHC	3 cut(s)	634, 1192, 2062
MluCI	AATT	6 cut(s)	1296, 1354, 1445, 1556, 1984, 2121
MmeI	TCCRAC	1 cut(s)	237
Mph1103I	ATGCAT	2 cut(s)	417, 1765
MroI	TCCGGA	1 cut(s)	872
MseI	TTAA	7 cut(s)	309, 1076, 1178, 1272, 1476, 2067, 2120
MslI	CAYNNNNRTG	1 cut(s)	1758
MspA1I	CMGCKG	1 cut(s)	177
MspI	CCGG	7 cut(s)	218, 274, 302, 569, 663, 873, 1409
MspR9I	CCNGG	7 cut(s)	218, 256, 664, 1054, 1369, 1658, 1889
MunI	CAATTG	1 cut(s)	1984
Mva1269I	GAATGC	1 cut(s)	1159
MvaI	CCWGG	5 cut(s)	256, 1054, 1369, 1658, 1889
MvnI	CGCG	3 cut(s)	126, 177, 234
NciI	CCSGG	2 cut(s)	218, 664
NdeI	CATATG	2 cut(s)	1148, 1911
NdeII	GATC	6 cut(s)	481, 666, 804, 1411, 1450, 1621
NheI	GCTAGC	1 cut(s)	1495
NlaIV	GGNNCC	3 cut(s)	617, 982, 1407
NmeAIII	GCCGAG	2 cut(s)	316, 868
NmuCI	GTSAC	3 cut(s)	99, 787, 1457
NsiI	ATGCAT	2 cut(s)	417, 1765
NspI	RCATGY	2 cut(s)	1588, 2099
PaeI	GCATGC	1 cut(s)	2099
PaeR7I	CTCGAG	1 cut(s)	341
PciI	ACATGT	1 cut(s)	1584
PctI	GAATGC	1 cut(s)	1159
PfeI	GAWTC	6 cut(s)	247, 346, 704, 952, 1750, 2138
PflMI	CCANNNNNTGG	1 cut(s)	1059
PkrI	GCNGC	7 cut(s)	179, 477, 732, 973, 985, 1269, 1670
Ppu21I	YACGTR	1 cut(s)	897
PscI	ACATGT	1 cut(s)	1584
PsiI	TTATAA	2 cut(s)	1005, 1215
Psp124BI	GAGCTC	2 cut(s)	634, 1192
Psp6I	CCWGG	5 cut(s)	254, 1052, 1367, 1656, 1887
PspEI	GGTNACC	1 cut(s)	1457
PspFI	CCCAGC	1 cut(s)	297
PspGI	CCWGG	5 cut(s)	254, 1052, 1367, 1656, 1887
PspN4I	GGNNCC	3 cut(s)	617, 982, 1407
PspPI	GGNCC	9 cut(s)	183, 220, 252, 258, 288, 295, 315, 352, 1885
PstNI	CAGNNNCTG	1 cut(s)	1059
PsuI	RGATCY	1 cut(s)	1450
RsaI	GTAC	8 cut(s)	39, 893, 1130, 1602, 1746, 1796, 2009, 2050
RsaNI	GTAC	8 cut(s)	38, 892, 1129, 1601, 1745, 1795, 2008, 2049
RseI	CAYNNNNRTG	1 cut(s)	1758
Rsr2I	CGGWCCG	1 cut(s)	315
RsrII	CGGWCCG	1 cut(s)	315
SacI	GAGCTC	2 cut(s)	634, 1192
SacII	CCGCGG	1 cut(s)	178
SaqAI	TTAA	7 cut(s)	309, 1076, 1178, 1272, 1476, 2067, 2120
SatI	GCNGC	7 cut(s)	178, 476, 731, 972, 984, 1268, 1669
Sau3AI	GATC	6 cut(s)	481, 666, 804, 1411, 1450, 1621
Sau96I	GGNCC	9 cut(s)	183, 220, 252, 258, 288, 295, 315, 352, 1885
ScaI	AGTACT	1 cut(s)	1746
ScrFI	CCNGG	7 cut(s)	218, 256, 664, 1054, 1369, 1658, 1889
SduI	GDGCHC	3 cut(s)	634, 1192, 2062
SexAI	ACCWGGT	1 cut(s)	1656
SfaNI	GCATC	9 cut(s)	424, 591, 747, 1650, 1692, 1729, 1772, 1797, 2007
SfcI	CTRYAG	1 cut(s)	1132
Sfr274I	CTCGAG	1 cut(s)	341
Sfr303I	CCGCGG	1 cut(s)	178
SgrBI	CCGCGG	1 cut(s)	178
SinI	GGWCC	4 cut(s)	183, 220, 315, 1885
SlaI	CTCGAG	1 cut(s)	341
SmiMI	CAYNNNNRTG	1 cut(s)	1758
SmlI	CTYRAG	4 cut(s)	341, 633, 1567, 2111
SmoI	CTYRAG	4 cut(s)	341, 633, 1567, 2111
SphI	GCATGC	1 cut(s)	2099
Sse9I	AATT	6 cut(s)	1296, 1354, 1445, 1556, 1984, 2121
SspMI	CTAG	7 cut(s)	1496, 1638, 1683, 1784, 2075, 2142, 2146
SstI	GAGCTC	2 cut(s)	634, 1192
StyD4I	CCNGG	7 cut(s)	216, 254, 662, 1052, 1367, 1656, 1887
StyI	CCWWGG	1 cut(s)	1467
TaaI	ACNGT	9 cut(s)	265, 584, 852, 994, 1133, 1167, 1204, 1744, 2057
TaiI	ACGT	3 cut(s)	101, 899, 1719
TaqI	TCGA	6 cut(s)	342, 540, 818, 1010, 1254, 1432
TasI	AATT	6 cut(s)	1296, 1354, 1445, 1556, 1984, 2121
TatI	WGTACW	3 cut(s)	1744, 1794, 2007
TauI	GCSGC	4 cut(s)	180, 974, 986, 1671
TfiI	GAWTC	6 cut(s)	247, 346, 704, 952, 1750, 2138
Tru1I	TTAA	7 cut(s)	309, 1076, 1178, 1272, 1476, 2067, 2120
Tru9I	TTAA	7 cut(s)	309, 1076, 1178, 1272, 1476, 2067, 2120
TscAI	CASTG	2 cut(s)	562, 2062
TseFI	GTSAC	3 cut(s)	99, 787, 1457
TseI	GCWGC	3 cut(s)	475, 730, 1267
Tsp45I	GTSAC	3 cut(s)	99, 787, 1457
TspDTI	ATGAA	4 cut(s)	1095, 1637, 1742, 2093
TspGWI	ACGGA	2 cut(s)	1198, 1413
TspRI	CASTG	2 cut(s)	562, 2062
Van91I	CCANNNNNTGG	1 cut(s)	1059
VneI	GTGCAC	1 cut(s)	2058
VpaK11BI	GGWCC	4 cut(s)	183, 220, 315, 1885
XagI	CCTNNNNNAGG	1 cut(s)	1676
XapI	RAATTY	2 cut(s)	1296, 1354
XceI	RCATGY	2 cut(s)	1588, 2099
XcmI	CCANNNNNNNNNTGG	1 cut(s)	511
XhoI	CTCGAG	1 cut(s)	341
XmiI	GTMKAC	2 cut(s)	1927, 1943
XspI	CTAG	7 cut(s)	1496, 1638, 1683, 1784, 2075, 2142, 2146
ZrmI	AGTACT	1 cut(s)	1746
Zsp2I	ATGCAT	2 cut(s)	417, 1765

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.