Pentatricopeptide repeat-containing protein At1g22960
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G22960 AT1G22960 |
| fragaria_vesca | FvH4_4g26410 |
| malus_domestica | MD13G1032800.v1.1 MD16G1034800.v1.1 |
| pyrus_communis | pycom13g02830 pycom16g02960 |
| rosa_chinensis | RchiOBHm_Chr4g0434041 |
| rosa_laevigata | RLG00000006706 |
| rosa_multiflora | Rmu_co8498505.1_g000001 Rmu_sc0000352.1_g000026 |
| rosa_roxburghii | Rroxscaffold_5G00375450 |
| rosa_rugosa | Rorug04G0272900 |
| rosa_samantha | Rh4AG328600 Rh4BG335900 Rh4CG351400 Rh4DG332300 Rh5AG231100 Rh5BG086200 |
| rosa_wichuraiana | Rw4G028490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 17, 23 |
| AatII | GACGTC | 1 cut(s) | 21 |
| AccII | CGCG | 1 cut(s) | 38 |
| AcyI | GRCGYC | 1 cut(s) | 18 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 64, 189 |
| AjiI | CACGTC | 1 cut(s) | 31 |
| AluBI | AGCT | 1 cut(s) | 152 |
| AluI | AGCT | 1 cut(s) | 152 |
| AoxI | GGCC | 1 cut(s) | 54 |
| ApeKI | GCWGC | 2 cut(s) | 121, 168 |
| AspLEI | GCGC | 1 cut(s) | 40 |
| AspS9I | GGNCC | 1 cut(s) | 55 |
| AsuC2I | CCSGG | 1 cut(s) | 14 |
| BbsI | GAAGAC | 1 cut(s) | 13 |
| BbvI | GCAGC | 2 cut(s) | 108, 180 |
| BcnI | CCSGG | 1 cut(s) | 14 |
| BisI | GCNGC | 2 cut(s) | 122, 169 |
| BlsI | GCNGC | 2 cut(s) | 123, 170 |
| Bme1390I | CCNGG | 1 cut(s) | 14 |
| BmgBI | CACGTC | 1 cut(s) | 31 |
| BmgT120I | GGNCC | 1 cut(s) | 55 |
| BmiI | GGNNCC | 1 cut(s) | 137 |
| BmrFI | CCNGG | 1 cut(s) | 14 |
| BpiI | GAAGAC | 1 cut(s) | 13 |
| Bpu10I | CCTNAGC | 1 cut(s) | 125 |
| BpuMI | CCSGG | 1 cut(s) | 14 |
| BsaHI | GRCGYC | 1 cut(s) | 18 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 64, 189 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 64, 189 |
| BseXI | GCAGC | 2 cut(s) | 108, 180 |
| BsgI | GTGCAG | 1 cut(s) | 187 |
| Bsh1236I | CGCG | 1 cut(s) | 38 |
| BshFI | GGCC | 1 cut(s) | 56 |
| BsiSI | CCGG | 1 cut(s) | 14 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 64, 189 |
| BsnI | GGCC | 1 cut(s) | 56 |
| BspANI | GGCC | 1 cut(s) | 56 |
| BspFNI | CGCG | 1 cut(s) | 38 |
| BspLI | GGNNCC | 1 cut(s) | 137 |
| BssNI | GRCGYC | 1 cut(s) | 18 |
| Bst4CI | ACNGT | 1 cut(s) | 104 |
| BstACI | GRCGYC | 1 cut(s) | 18 |
| BstC8I | GCNNGC | 1 cut(s) | 173 |
| BstDEI | CTNAG | 2 cut(s) | 116, 125 |
| BstFNI | CGCG | 1 cut(s) | 38 |
| BstHHI | GCGC | 1 cut(s) | 40 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 149 |
| BstSCI | CCNGG | 1 cut(s) | 12 |
| BstUI | CGCG | 1 cut(s) | 38 |
| BstV1I | GCAGC | 2 cut(s) | 108, 180 |
| BstV2I | GAAGAC | 1 cut(s) | 13 |
| BsuRI | GGCC | 1 cut(s) | 56 |
| BtrI | CACGTC | 1 cut(s) | 31 |
| Cac8I | GCNNGC | 1 cut(s) | 173 |
| CfoI | GCGC | 1 cut(s) | 40 |
| Cfr13I | GGNCC | 1 cut(s) | 55 |
| CviJI | RGCY | 3 cut(s) | 56, 121, 152 |
| CviKI_1 | RGCY | 3 cut(s) | 56, 121, 152 |
| DdeI | CTNAG | 2 cut(s) | 116, 125 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 17, 23 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 17, 23 |
| Fnu4HI | GCNGC | 2 cut(s) | 122, 169 |
| Fsp4HI | GCNGC | 2 cut(s) | 122, 169 |
| GlaI | GCGC | 1 cut(s) | 39 |
| GluI | GCNGC | 2 cut(s) | 122, 169 |
| HaeIII | GGCC | 1 cut(s) | 56 |
| HapII | CCGG | 1 cut(s) | 14 |
| HhaI | GCGC | 1 cut(s) | 40 |
| Hin1I | GRCGYC | 1 cut(s) | 18 |
| Hin6I | GCGC | 1 cut(s) | 38 |
| HinP1I | GCGC | 1 cut(s) | 38 |
| HinfI | GANTC | 2 cut(s) | 43, 48 |
| HpaII | CCGG | 1 cut(s) | 14 |
| Hpy166II | GTNNAC | 1 cut(s) | 28 |
| Hpy188I | TCNGA | 3 cut(s) | 10, 192, 218 |
| Hpy8I | GTNNAC | 1 cut(s) | 28 |
| HpyAV | CCTTC | 1 cut(s) | 195 |
| HpyCH4III | ACNGT | 1 cut(s) | 104 |
| HpyCH4IV | ACGT | 2 cut(s) | 18, 30 |
| HpyCH4V | TGCA | 2 cut(s) | 143, 168 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 149 |
| HpyF3I | CTNAG | 2 cut(s) | 116, 125 |
| HpySE526I | ACGT | 2 cut(s) | 18, 30 |
| Hsp92I | GRCGYC | 1 cut(s) | 18 |
| HspAI | GCGC | 1 cut(s) | 38 |
| LpnPI | CCDG | 3 cut(s) | 27, 75, 157 |
| Lsp1109I | GCAGC | 2 cut(s) | 108, 180 |
| MaeII | ACGT | 2 cut(s) | 18, 30 |
| MboII | GAAGA | 1 cut(s) | 13 |
| MlyI | GAGTC | 1 cut(s) | 57 |
| MmeI | TCCRAC | 1 cut(s) | 170 |
| MnlI | CCTC | 4 cut(s) | 44, 46, 58, 151 |
| MseI | TTAA | 2 cut(s) | 69, 179 |
| MspI | CCGG | 1 cut(s) | 14 |
| MspR9I | CCNGG | 1 cut(s) | 14 |
| MvnI | CGCG | 1 cut(s) | 38 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 149 |
| NciI | CCSGG | 1 cut(s) | 14 |
| NlaIV | GGNNCC | 1 cut(s) | 137 |
| PfeI | GAWTC | 1 cut(s) | 43 |
| PkrI | GCNGC | 2 cut(s) | 123, 170 |
| PleI | GAGTC | 1 cut(s) | 56 |
| PpsI | GAGTC | 1 cut(s) | 56 |
| PspN4I | GGNNCC | 1 cut(s) | 137 |
| PspPI | GGNCC | 1 cut(s) | 55 |
| SaqAI | TTAA | 2 cut(s) | 69, 179 |
| SatI | GCNGC | 2 cut(s) | 122, 169 |
| Sau96I | GGNCC | 1 cut(s) | 55 |
| SchI | GAGTC | 1 cut(s) | 57 |
| ScrFI | CCNGG | 1 cut(s) | 14 |
| SetI | ASST | 8 cut(s) | 21, 33, 69, 113, 141, 154, 185, 206 |
| StyD4I | CCNGG | 1 cut(s) | 12 |
| TaaI | ACNGT | 1 cut(s) | 104 |
| TaiI | ACGT | 2 cut(s) | 21, 33 |
| TaqI | TCGA | 2 cut(s) | 46, 51 |
| TfiI | GAWTC | 1 cut(s) | 43 |
| Tru1I | TTAA | 2 cut(s) | 69, 179 |
| Tru9I | TTAA | 2 cut(s) | 69, 179 |
| TseI | GCWGC | 2 cut(s) | 121, 168 |
| ZraI | GACGTC | 1 cut(s) | 19 |