Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0012825

Physical Location & Seq

Genomic Coordinates Reverse (-)

29839533 .. 29842928

Gene Structure 3396 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g29970.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3396 bp

ATGAAATGGAGTGTCCCGACCAAGACCCTGTTTCTCCTCAAAGTTGTCTGCTTTCTATGCTTCTCAGTTTCCGGCGACAACCGCTGGCCGGAGAAGTCGGTTCTGCTCGACCTGAAAGCCTCGGTGTCGGACCCAGATGGGGTTCTGTCTACCTGGGCCGACAGCAGCTCTGATCACCACTGTTCCTGGTTCGGGGTCTCCTGCGACTCGAAGTCCAAGGTTGTCTCGCTCACCATAACCGGCGGCGGTGAAAATAAAAGAGGTAACTTTGAAGCCTTTACTTGCTCTGAGACTGTGAAATTTCAATTCCAGTATGATGGGTTTGGGGCTTGGAGAAGTAGTGAGGTTAGTGATGGGAGATTAGGTGGAAAGCTTTCACCTTTGATTGGGAAACTGAGAGAGCTTAGAGTTTTGTCACTGCCGTTTAATGAGCTTAGAGGTGAGATTCCCGAGGAGGTTTGGGGGTTAGAGAAGCTTGAAGTGCTTGATCTTGAGGGGAACTTGTTGGAGGGGGAATTGCCGAGGAGGTTTGAGGGTTTGAGGAAGTTGAGGGTTTTGAATGTTGGGTTTAATCGGATTGGTGGGGAGGTTCCGGTTTCGCTTTCGAAATGTAAGGATTTGGAGGTTATGAGTTTGGCTGGGAATGAAGTGAGTGGAGCTGTTCCTGTGTTTTTGGGTGGTTTTGCAAAGTTGAAGGGGGTGAATTTGGGTGGGAATAGGTTGAATGGATCGATTCCGGGCAATTTTGGAAGATCTTGCCGGAATCTTGAGCATTTTGATGTGTCGGGGAATTCCCTTGTTGGGAAGATTCCGCGTAGTTTGGGGAATTGTCTGCGGTTACGGACTGTTTTGTTGTTTTCGAATATGCTGGATGGTGTGATTCCTGGTGAACTTGGTAAGATTCGGGGGCTTGAAGTTCTGGATGTGTCTAGGAATAGCCTTAGTGGTCCTATCTCTGCTGAGCTTGGACAATGCGCCAATTTGTCGGTTCTTGTCCTGTCAAATCTTTTTAATCCATTGCCAATCGATCAGAATACAAGTGGAGATTCGTCGGTTGAGTTATACAAAGGAGTGGTTGATGATTACAATTTTTATGAAGGCTCCATTCCTGAGGAGATTACAAGGTTACCGAATTTGAGAATAGTTTGGGCGCCAAGGGCAACCCTCGAAGGCCAGCTTCCGAGCAATTGGGGTGGTTGTGAGAACTTGGAGATGGTGAACTTGGCTCAGAACCTTTTCACTGGAGAGGTCATTGGAGTGTTTGATAGATGCAAGAAGCTGCAGTATCTAAATTTGAGCTCAAATAAGCTGAGTGGGAAGCTTGATGGAAAACTACCAGTTCCTTGTATGACCATTTTCAGTGTCAGTGGGAACCTCTTGTCTGGACCCATCCCTACATTTGATTTCGCAGTGTGCCCCCATGTGCCTCGAAATTCAGATCTTGTCCGAGTCCACAATCCATCATTTCCGTATCAAGTTCTCTTTATTTGCAGAACTTATCTTGACACCCATTTACCACTTTTTGGTGCTAGTTTCACATTGATTCATGATTTTAGTGGTAACAACTTCACTGGTCCAATCCAACACCTTCCTCTTGCACCTGAGAGGTTAGGGAAGCAAACTGTTTATGCATTTCTTGCTGGTGGGAACAAGTTCACTGGATCATTTGCTGAAATCTTAAATGGAAAGTGTGATGGCTTATATGGGATGGTTTTTAATGTTAGCTACAACAAGTTATCAGGTCACATTCCATTCAAGACTAGCGTGATATGCAGATCACTTAGACTCTTGGATGCCTCTGGAAATCTCTTATCTGGGTCAATACCACCAGATCTTGGGGATGTGAAGTCTCTCGTCTTTCTCGACTTGAGCAGGAACCAGTTGCAGGGTGAAATTCCTACAGGACTCAGTAATTTGAGGTATCTCAAGTATCTGTCCTTGGCTGATAACAACTTTACTGGTACTATTCCTGCTAGCTTTGTGAAGTTGCGCTCCCTTGAAGTTTTAAAGCTATCAGCAAACTCTCTTTCTGGCGATATCCCCCAAGGTCTTGTTAAGTTGAAAAACTTAACTATTTTTATGCTCAACAACAATAAGCTCTCTGGGCACATCCCTTCTGGTTTGACTAATGTGAGATCCCTGTCTACATTTAATGTCTCATTTAACAACCTGTCTGGTTCATTTCCATTGAGCAATAATATGATGAACTGTAGCGGTGTCCTTGGGAACCCTTTTGTTAATCAATGCCGCATTGTTTCCCTCGCTGCGCCGTATTCAGCTCAGCCAGGTAGCTCTGTGAGTTCACCAGATACCTCTGATTCTCAGTCAACAAGTGCTCCTGGAAATAATGGTATAAAGTCAATTGAGATTGCATCCATAGTATCTGCATCAGCTATCGTGTTGGTTCTCATCACTCTTATTATCCTCTTCTTTTACACAAGAAAATGGATACCAGATTCCAGAGTTCAGGTTTTTGAAAATAAAGAAATTACAATTTTCACAGAGATTGGGGCACCATTGACGTTTGAGAATATTGTTCAGGCAACAGGGAATTTTAATGCCAGTAACTACATTGGGAGTGGAGGATTCGGGGCAACTTACAAAGCAGAGATTGCTCCAGGAACCATAATAGCTGTCAAGAGGCTTGCTGTTGGAAGGTTTCACGGTGTTCAACAATTCCATGCTGAGATTAAGACCCTCGGAAGTGTGAGACACCCCAACCTGGTAACTTTAATAGGTTACCATGCCAGTGAAACCGAGATGCTACTCATATATAATTATTTACCAGGAGGGAATTTGGAAAATTTTATCAAGGAAAGATCTAAAAGATCTTTTACCTGGAAGATTCTCCACAAAATTGCTCTTGATATTGCTCATGCCCTTTCTTATCTTCATGACGACTGTATCCCGCGTGTCCTACACCGTGATGTCAAGCCAAGCAATATACTGTTAGATGATAACTTGAATGCTTATTTGTCTGACTTTGGATTGTCTAGGCTGCTGGGAACTTCTGAAACGCATGCAACAACCGGTGTCGCAGGAACTTTTGGGTACGTAGCACCCGAGTATGCTATGACCTGTCGTGTCTCTGAGAAGGCCGATGTTTACAGCTATGGTGTTGTGCTGCTTGAATTGATTTCGGATAAGAAAGCCCTGGACCCATCTTTCTCTTCACATGGAAATGGTTTCAACATTGTTTCTTGGGTGTGCATGCTGTTAAAAATGGGTCGGGCTAAAGATGTATTCATGGAAGGACTATGGGAGGCAGGACCTGAAGATGATCTGGTCGAGATGCTGTACTTGGCTGTCAAATGTACTGTTGAGGTCCTCTCCATTAGGCCTACAATGAGGCAAGTTGTCCGAACACTGAAGCGTATACAACCTGTTTCAAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000578 GO:0001101 GO:0003002 GO:0003006 GO:0005575 GO:0005623 GO:0005886 GO:0006725 GO:0006950 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009555 GO:0009628 GO:0009698 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009808 GO:0009846 GO:0009856 GO:0009880 GO:0009888 GO:0009908 GO:0009942 GO:0009945 GO:0009956 GO:0009987 GO:0010035 GO:0010073 GO:0010152 GO:0010154 GO:0016020 GO:0016043 GO:0019748 GO:0021700 GO:0022414 GO:0022607 GO:0032501 GO:0032502 GO:0042221 GO:0043933 GO:0044085 GO:0044237 GO:0044464 GO:0044706 GO:0048229 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048507 GO:0048508 GO:0048608 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0051259 GO:0051260 GO:0051704 GO:0061458 GO:0065003 GO:0071704 GO:0071840 GO:0071944 GO:0090567 GO:0099402 GO:1901360 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase

Protein Analysis

1132

Amino Acids

123.41

Weight (kDa)

8.07

Isoelectric Point (pI)

31.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	31 - 69	7.6e-12	Leucine rich repeat N-terminal domain
LRR_14	PF23598	129 - 232	1.1e-08	Leucine-rich repeat region
LRR_14	PF23598	592 - 718	3e-10	Leucine-rich repeat region
LRR_8	PF13855	618 - 676	8.7e-08	Leucine rich repeat
Pkinase	PF00069	854 - 1053	1.7e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	855 - 1122	1.7e-39	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0012825)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G69270
fragaria_vesca	FvH4_4g29970
malus_domestica	MD13G1062000.v1.1 MD16G1060500.v1.1
prunus_persica	Prupe.1G287800_v2.0.a1
pyrus_communis	pycom13g05450 pycom16g05270
rosa_chinensis	RchiOBHm_Chr4g0438241
rosa_laevigata	RLG00000006378
rosa_multiflora	Rmu_sc0002682.1_g000004
rosa_roxburghii	Rroxscaffold_5G00379330
rosa_rugosa	Rorug04G0308300
rosa_samantha	Rh4AG359300 Rh4BG370100 Rh4CG384300 Rh4DG365200
rosa_wichuraiana	Rw0G006390 Rw0G016330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	1150, 2512
AccB7I	CCANNNNNTGG	2 cut(s)	1523, 1835
AccI	GTMKAC	3 cut(s)	149, 2144, 3376
AccII	CGCG	2 cut(s)	814, 2911
AciI	CCGC	8 cut(s)	82, 243, 246, 812, 835, 2214, 2248, 2909
AclWI	GGATC	3 cut(s)	736, 1669, 2130
AcoI	YGGCCR	1 cut(s)	86
AcuI	CTGAAG	2 cut(s)	3294, 3389
AcyI	GRCGYC	1 cut(s)	1151
AfaI	GTAC	4 cut(s)	1963, 3053, 3299, 3316
AfiI	CCNNNNNNNGG	9 cut(s)	88, 139, 192, 386, 801, 1523, 1835, 1885, 2722
AgeI	ACCGGT	1 cut(s)	3029
AhdI	GACNNNNNGTC	1 cut(s)	211
Alw21I	GWGCWC	2 cut(s)	1301, 2338
Alw26I	GTCTC	7 cut(s)	202, 229, 284, 1854, 2161, 2704, 3091
AlwI	GGATC	3 cut(s)	736, 1669, 2130
AlwNI	CAGNNNCTG	1 cut(s)	3272
Ama87I	CYCGRG	2 cut(s)	449, 3062
AoxI	GGCC	5 cut(s)	86, 156, 1171, 3096, 3338
ApeKI	GCWGC	5 cut(s)	165, 1279, 2264, 2998, 3124
AsiGI	ACCGGT	1 cut(s)	3029
Asp700I	GAANNNNTTC	3 cut(s)	373, 1235, 1652
AspLEI	GCGC	4 cut(s)	977, 1153, 1992, 2269
AspS9I	GGNCC	8 cut(s)	130, 156, 947, 1385, 1574, 3157, 3269, 3325
AsuC2I	CCSGG	1 cut(s)	738
AsuII	TTCGAA	2 cut(s)	605, 860
AsuNHI	GCTAGC	1 cut(s)	1973
AvaI	CYCGRG	2 cut(s)	449, 3062
AvaII	GGWCC	7 cut(s)	130, 947, 1385, 1574, 3157, 3269, 3325
AxyI	CCTNAGG	1 cut(s)	1110
BaeGI	GKGCMC	3 cut(s)	1418, 2109, 2515
BaeI	ACNNNNGTAYC	2 cut(s)	2887, 2920
BanI	GGYRCC	2 cut(s)	1150, 2512
BanII	GRGCYC	1 cut(s)	1301
Bbv12I	GWGCWC	2 cut(s)	1301, 2338
BbvI	GCAGC	5 cut(s)	177, 1266, 2251, 2985, 3111
BceAI	ACGGC	2 cut(s)	406, 2254
BciVI	GTATCC	2 cut(s)	2442, 2915
BclI	TGATCA	1 cut(s)	172
BcnI	CCSGG	1 cut(s)	738
BcoDI	GTCTC	7 cut(s)	202, 229, 284, 1854, 2161, 2704, 3091
BfaI	CTAG	6 cut(s)	930, 1530, 1761, 1974, 2994, 3394
BfmI	CTRYAG	3 cut(s)	1280, 1899, 2209
BfoI	RGCGCY	1 cut(s)	1154
BfuI	GTATCC	2 cut(s)	2442, 2915
BglII	AGATCT	5 cut(s)	752, 1438, 1831, 2819, 2828
BisI	GCNGC	7 cut(s)	166, 244, 1280, 2248, 2265, 2999, 3125
BlpI	GCTNAGC	2 cut(s)	960, 2280
BlsI	GCNGC	7 cut(s)	167, 245, 1281, 2249, 2266, 3000, 3126
Bme18I	GGWCC	7 cut(s)	130, 947, 1385, 1574, 3157, 3269, 3325
BmeRI	GACNNNNNGTC	1 cut(s)	211
BmeT110I	CYCGRG	2 cut(s)	449, 3062
BmgT120I	GGNCC	8 cut(s)	130, 156, 947, 1385, 1574, 3157, 3269, 3325
BmsI	GCATC	6 cut(s)	1259, 1783, 2381, 2396, 2751, 3282
BmtI	GCTAGC	1 cut(s)	1977
BplI	GAGNNNNNCTC	2 cut(s)	3314, 3346
BpmI	CTGGAG	2 cut(s)	1263, 2601
Bpu1102I	GCTNAGC	2 cut(s)	960, 2280
Bpu14I	TTCGAA	2 cut(s)	605, 860
BpuEI	CTTGAG	4 cut(s)	512, 788, 1888, 1910
BpuMI	CCSGG	1 cut(s)	738
Bsa29I	ATCGAT	2 cut(s)	731, 1026
BsaAI	YACGTR	1 cut(s)	3055
BsaHI	GRCGYC	1 cut(s)	1151
BsaI	GGTCTC	1 cut(s)	202
BsaWI	WCCGGW	2 cut(s)	592, 3029
BsaXI	ACNNNNNCTCC	6 cut(s)	325, 349, 355, 379, 2320, 2350
Bsc4I	CCNNNNNNNGG	9 cut(s)	88, 139, 192, 386, 801, 1523, 1835, 1885, 2722
Bse118I	RCCGGY	2 cut(s)	239, 3029
Bse1I	ACTGG	9 cut(s)	310, 1246, 1337, 1576, 1663, 1879, 1963, 2562, 2748
Bse21I	CCTNAGG	1 cut(s)	1110
Bse3DI	GCAATG	1 cut(s)	1016
BseCI	ATCGAT	2 cut(s)	731, 1026
BseGI	GGATG	8 cut(s)	877, 928, 1389, 1713, 1798, 1846, 2109, 2372
BseLI	CCNNNNNNNGG	9 cut(s)	88, 139, 192, 386, 801, 1523, 1835, 1885, 2722
BseMI	GCAATG	1 cut(s)	1016
BseNI	ACTGG	9 cut(s)	310, 1246, 1337, 1576, 1663, 1879, 1963, 2562, 2748
BseRI	GAGGAG	4 cut(s)	26, 467, 538, 1127
BseSI	GKGCMC	3 cut(s)	1418, 2109, 2515
BseXI	GCAGC	5 cut(s)	177, 1266, 2251, 2985, 3111
BseYI	CCCAGC	2 cut(s)	638, 3001
Bsh1236I	CGCG	2 cut(s)	814, 2911
BshFI	GGCC	5 cut(s)	88, 158, 1173, 3098, 3340
BshNI	GGYRCC	2 cut(s)	1150, 2512
BshTI	ACCGGT	1 cut(s)	3029
BshVI	ATCGAT	2 cut(s)	731, 1026
BsiHKAI	GWGCWC	2 cut(s)	1301, 2338
BsiHKCI	CYCGRG	2 cut(s)	449, 3062
BsiSI	CCGG	7 cut(s)	72, 89, 240, 593, 737, 760, 3030
BslI	CCNNNNNNNGG	9 cut(s)	88, 139, 192, 386, 801, 1523, 1835, 1885, 2722
BsmAI	GTCTC	7 cut(s)	202, 229, 284, 1854, 2161, 2704, 3091
BsmI	GAATGC	1 cut(s)	2971
BsnI	GGCC	5 cut(s)	88, 158, 1173, 3098, 3340
Bso31I	GGTCTC	1 cut(s)	202
BsoBI	CYCGRG	2 cut(s)	449, 3062
Bsp119I	TTCGAA	2 cut(s)	605, 860
Bsp1286I	GDGCHC	5 cut(s)	1301, 1418, 2109, 2338, 2515
Bsp1720I	GCTNAGC	2 cut(s)	960, 2280
BspACI	CCGC	8 cut(s)	82, 243, 246, 812, 835, 2214, 2248, 2909
BspANI	GGCC	5 cut(s)	88, 158, 1173, 3098, 3340
BspDI	ATCGAT	2 cut(s)	731, 1026
BspFNI	CGCG	2 cut(s)	814, 2911
BspHI	TCATGA	2 cut(s)	1546, 2893
BspMAI	CTGCAG	1 cut(s)	1284
BspOI	GCTAGC	1 cut(s)	1977
BspPI	GGATC	3 cut(s)	736, 1669, 2130
BspT104I	TTCGAA	2 cut(s)	605, 860
BspT107I	GGYRCC	2 cut(s)	1150, 2512
BspTNI	GGTCTC	1 cut(s)	202
BsrDI	GCAATG	1 cut(s)	1016
BsrFI	RCCGGY	2 cut(s)	239, 3029
BsrI	ACTGG	9 cut(s)	310, 1246, 1337, 1576, 1663, 1879, 1963, 2562, 2748
BssAI	RCCGGY	2 cut(s)	239, 3029
BssNAI	GTATAC	1 cut(s)	3377
BssNI	GRCGYC	1 cut(s)	1151
BssT1I	CCWWGG	5 cut(s)	216, 1154, 1938, 2044, 2221
Bst1107I	GTATAC	1 cut(s)	3377
Bst6I	CTCTTC	2 cut(s)	2432, 3175
BstACI	GRCGYC	1 cut(s)	1151
BstAPI	GCANNNNNTGC	2 cut(s)	1637, 2612
BstBAI	YACGTR	1 cut(s)	3055
BstBI	TTCGAA	2 cut(s)	605, 860
BstC8I	GCNNGC	6 cut(s)	86, 1175, 1975, 2646, 3021, 3212
BstEII	GGTNACC	2 cut(s)	1125, 2738
BstF5I	GGATG	8 cut(s)	877, 928, 1389, 1713, 1798, 1846, 2109, 2372
BstFNI	CGCG	2 cut(s)	814, 2911
BstH2I	RGCGCY	1 cut(s)	1154
BstHHI	GCGC	4 cut(s)	977, 1153, 1992, 2269
BstMAI	GTCTC	7 cut(s)	202, 229, 284, 1854, 2161, 2704, 3091
BstMWI	GCNNNNNNNGC	8 cut(s)	57, 81, 481, 1157, 1637, 1770, 2104, 2612
BstNSI	RCATGY	2 cut(s)	3023, 3214
BstPI	GGTNACC	2 cut(s)	1125, 2738
BstSFI	CTRYAG	3 cut(s)	1280, 1899, 2209
BstSLI	GKGCMC	3 cut(s)	1418, 2109, 2515
BstSNI	TACGTA	1 cut(s)	3055
BstUI	CGCG	2 cut(s)	814, 2911
BstV1I	GCAGC	5 cut(s)	177, 1266, 2251, 2985, 3111
BstX2I	RGATCY	6 cut(s)	752, 1438, 1831, 2135, 2819, 2828
BstXI	CCANNNNNNTGG	1 cut(s)	317
BstYI	RGATCY	6 cut(s)	752, 1438, 1831, 2135, 2819, 2828
BstZ17I	GTATAC	1 cut(s)	3377
Bsu15I	ATCGAT	2 cut(s)	731, 1026
Bsu36I	CCTNAGG	1 cut(s)	1110
BsuI	GTATCC	2 cut(s)	2442, 2915
BsuRI	GGCC	5 cut(s)	88, 158, 1173, 3098, 3340
BsuTUI	ATCGAT	2 cut(s)	731, 1026
BtsCI	GGATG	8 cut(s)	877, 928, 1389, 1713, 1798, 1846, 2109, 2372
BtsI	GCAGTG	2 cut(s)	416, 1416
Cac8I	GCNNGC	6 cut(s)	86, 1175, 1975, 2646, 3021, 3212
CaiI	CAGNNNCTG	1 cut(s)	3272
CciI	TCATGA	2 cut(s)	1546, 2893
CfoI	GCGC	4 cut(s)	977, 1153, 1992, 2269
Cfr10I	RCCGGY	2 cut(s)	239, 3029
Cfr13I	GGNCC	8 cut(s)	130, 156, 947, 1385, 1574, 3157, 3269, 3325
ClaI	ATCGAT	2 cut(s)	731, 1026
CsiI	ACCWGGT	1 cut(s)	2721
Csp6I	GTAC	4 cut(s)	1962, 3052, 3298, 3315
CspAI	ACCGGT	1 cut(s)	3029
CspCI	CAANNNNNGTGG	2 cut(s)	1174, 1209
CviQI	GTAC	4 cut(s)	1962, 3052, 3298, 3315
DinI	GGCGCC	1 cut(s)	1152
DraI	TTTAAA	1 cut(s)	2007
DriI	GACNNNNNGTC	1 cut(s)	211
EaeI	YGGCCR	1 cut(s)	86
Eam1104I	CTCTTC	2 cut(s)	2432, 3175
Eam1105I	GACNNNNNGTC	1 cut(s)	211
EarI	CTCTTC	2 cut(s)	2432, 3175
Ecl136II	GAGCTC	1 cut(s)	1299
Eco105I	TACGTA	1 cut(s)	3055
Eco130I	CCWWGG	5 cut(s)	216, 1154, 1938, 2044, 2221
Eco147I	AGGCCT	1 cut(s)	3340
Eco24I	GRGCYC	1 cut(s)	1301
Eco31I	GGTCTC	1 cut(s)	202
Eco32I	GATATC	1 cut(s)	2038
Eco47I	GGWCC	7 cut(s)	130, 947, 1385, 1574, 3157, 3269, 3325
Eco53kI	GAGCTC	1 cut(s)	1299
Eco57I	CTGAAG	2 cut(s)	3294, 3389
Eco81I	CCTNAGG	1 cut(s)	1110
Eco88I	CYCGRG	2 cut(s)	449, 3062
Eco91I	GGTNACC	2 cut(s)	1125, 2738
EcoICRI	GAGCTC	1 cut(s)	1299
EcoO109I	RGGNCCY	2 cut(s)	3269, 3325
EcoO65I	GGTNACC	2 cut(s)	1125, 2738
EcoRI	GAATTC	1 cut(s)	790
EcoRV	GATATC	1 cut(s)	2038
EcoT14I	CCWWGG	5 cut(s)	216, 1154, 1938, 2044, 2221
EcoT22I	ATGCAT	1 cut(s)	1633
EcoT38I	GRGCYC	1 cut(s)	1301
EgeI	GGCGCC	1 cut(s)	1152
EheI	GGCGCC	1 cut(s)	1152
ErhI	CCWWGG	5 cut(s)	216, 1154, 1938, 2044, 2221
FalI	AAGNNNNNCTT	2 cut(s)	1161, 1193
FauI	CCCGC	1 cut(s)	2916
FbaI	TGATCA	1 cut(s)	172
FblI	GTMKAC	3 cut(s)	149, 2144, 3376
Fnu4HI	GCNGC	7 cut(s)	166, 244, 1280, 2248, 2265, 2999, 3125
FokI	GGATG	8 cut(s)	884, 935, 1376, 1720, 1805, 1853, 2096, 2359
FriOI	GRGCYC	1 cut(s)	1301
Fsp4HI	GCNGC	7 cut(s)	166, 244, 1280, 2248, 2265, 2999, 3125
FspBI	CTAG	6 cut(s)	930, 1530, 1761, 1974, 2994, 3394
GlaI	GCGC	4 cut(s)	976, 1152, 1991, 2268
GluI	GCNGC	7 cut(s)	166, 244, 1280, 2248, 2265, 2999, 3125
GsaI	CCCAGC	2 cut(s)	642, 3005
GsuI	CTGGAG	2 cut(s)	1263, 2601
HaeII	RGCGCY	1 cut(s)	1154
HaeIII	GGCC	5 cut(s)	88, 158, 1173, 3098, 3340
HapII	CCGG	7 cut(s)	72, 89, 240, 593, 737, 760, 3030
HhaI	GCGC	4 cut(s)	977, 1153, 1992, 2269
Hin1I	GRCGYC	1 cut(s)	1151
Hin6I	GCGC	4 cut(s)	975, 1151, 1990, 2267
HinP1I	GCGC	4 cut(s)	975, 1151, 1990, 2267
HincII	GTYRAC	1 cut(s)	2328
HindII	GTYRAC	1 cut(s)	2328
HindIII	AAGCTT	3 cut(s)	371, 473, 1319
HpaII	CCGG	7 cut(s)	72, 89, 240, 593, 737, 760, 3030
Hpy99I	CGWCG	1 cut(s)	1054
HpyAV	CCTTC	8 cut(s)	688, 1091, 1163, 1598, 2124, 2649, 3088, 3245
HpyCH4IV	ACGT	2 cut(s)	2522, 3054
HpyF10VI	GCNNNNNNNGC	8 cut(s)	57, 81, 481, 1157, 1637, 1770, 2104, 2612
HpySE526I	ACGT	2 cut(s)	2522, 3054
Hsp92I	GRCGYC	1 cut(s)	1151
HspAI	GCGC	4 cut(s)	975, 1151, 1990, 2267
KasI	GGCGCC	1 cut(s)	1150
Ksp22I	TGATCA	1 cut(s)	172
LmnI	GCTCC	5 cut(s)	656, 1106, 1997, 2341, 2620
Lsp1109I	GCAGC	5 cut(s)	177, 1266, 2251, 2985, 3111
LweI	GCATC	6 cut(s)	1259, 1783, 2381, 2396, 2751, 3282
MabI	ACCWGGT	1 cut(s)	2721
MaeI	CTAG	6 cut(s)	930, 1530, 1761, 1974, 2994, 3394
MaeII	ACGT	2 cut(s)	2522, 3054
MaeIII	GTNAC	9 cut(s)	263, 414, 837, 1125, 1559, 1742, 2564, 2725, 2738
MboII	GAAGA	7 cut(s)	762, 817, 2419, 2854, 2882, 3162, 3287
MfeI	CAATTG	2 cut(s)	1186, 2361
MflI	RGATCY	6 cut(s)	752, 1438, 1831, 2135, 2819, 2828
MhlI	GDGCHC	5 cut(s)	1301, 1418, 2109, 2338, 2515
Mly113I	GGCGCC	1 cut(s)	1151
MlyI	GAGTC	4 cut(s)	200, 1458, 1779, 1899
MmeI	TCCRAC	4 cut(s)	108, 486, 1606, 2632
Mph1103I	ATGCAT	1 cut(s)	1633
MroXI	GAANNNNTTC	3 cut(s)	373, 1235, 1652
MslI	CAYNNNNRTG	5 cut(s)	777, 1256, 2748, 2925, 3180
MspA1I	CMGCKG	1 cut(s)	84
MspI	CCGG	7 cut(s)	72, 89, 240, 593, 737, 760, 3030
MunI	CAATTG	2 cut(s)	1186, 2361
Mva1269I	GAATGC	1 cut(s)	2971
MvnI	CGCG	2 cut(s)	814, 2911
MwoI	GCNNNNNNNGC	8 cut(s)	57, 81, 481, 1157, 1637, 1770, 2104, 2612
NarI	GGCGCC	1 cut(s)	1151
NciI	CCSGG	1 cut(s)	738
NheI	GCTAGC	1 cut(s)	1973
NmeAIII	GCCGAG	1 cut(s)	546
NmuCI	GTSAC	2 cut(s)	414, 1742
NsiI	ATGCAT	1 cut(s)	1633
NspI	RCATGY	2 cut(s)	3023, 3214
NspV	TTCGAA	2 cut(s)	605, 860
PaeI	GCATGC	2 cut(s)	3023, 3214
PagI	TCATGA	2 cut(s)	1546, 2893
PceI	AGGCCT	1 cut(s)	3340
PcsI	WCGNNNNNNNCGW	2 cut(s)	1860, 3060
PctI	GAATGC	1 cut(s)	2971
PdmI	GAANNNNTTC	3 cut(s)	373, 1235, 1652
PflMI	CCANNNNNTGG	2 cut(s)	1523, 1835
PfoI	TCCNGGA	2 cut(s)	2338, 2617
PinAI	ACCGGT	1 cut(s)	3029
PkrI	GCNGC	7 cut(s)	167, 245, 1281, 2249, 2266, 3000, 3126
PleI	GAGTC	4 cut(s)	200, 1457, 1779, 1899
PluTI	GGCGCC	1 cut(s)	1154
PpsI	GAGTC	4 cut(s)	200, 1457, 1779, 1899
Ppu21I	YACGTR	1 cut(s)	3055
PpuMI	RGGWCCY	2 cut(s)	3269, 3325
Psp124BI	GAGCTC	1 cut(s)	1301
Psp5II	RGGWCCY	2 cut(s)	3269, 3325
PspEI	GGTNACC	2 cut(s)	1125, 2738
PspFI	CCCAGC	2 cut(s)	638, 3001
PspPI	GGNCC	8 cut(s)	130, 156, 947, 1385, 1574, 3157, 3269, 3325
PspPPI	RGGWCCY	2 cut(s)	3269, 3325
PstI	CTGCAG	1 cut(s)	1284
PstNI	CAGNNNCTG	1 cut(s)	3272
PsuI	RGATCY	6 cut(s)	752, 1438, 1831, 2135, 2819, 2828
RsaI	GTAC	4 cut(s)	1963, 3053, 3299, 3316
RsaNI	GTAC	4 cut(s)	1962, 3052, 3298, 3315
RseI	CAYNNNNRTG	5 cut(s)	777, 1256, 2748, 2925, 3180
SacI	GAGCTC	1 cut(s)	1301
SatI	GCNGC	7 cut(s)	166, 244, 1280, 2248, 2265, 2999, 3125
Sau96I	GGNCC	8 cut(s)	130, 156, 947, 1385, 1574, 3157, 3269, 3325
SchI	GAGTC	4 cut(s)	200, 1458, 1779, 1899
SduI	GDGCHC	5 cut(s)	1301, 1418, 2109, 2338, 2515
SexAI	ACCWGGT	1 cut(s)	2721
SfaNI	GCATC	6 cut(s)	1259, 1783, 2381, 2396, 2751, 3282
SfcI	CTRYAG	3 cut(s)	1280, 1899, 2209
SfoI	GGCGCC	1 cut(s)	1152
SfuI	TTCGAA	2 cut(s)	605, 860
SinI	GGWCC	7 cut(s)	130, 947, 1385, 1574, 3157, 3269, 3325
SmiMI	CAYNNNNRTG	5 cut(s)	777, 1256, 2748, 2925, 3180
SmlI	CTYRAG	4 cut(s)	491, 767, 1867, 1925
SmoI	CTYRAG	4 cut(s)	491, 767, 1867, 1925
SnaBI	TACGTA	1 cut(s)	3055
SphI	GCATGC	2 cut(s)	3023, 3214
SseBI	AGGCCT	1 cut(s)	3340
SsiI	CCGC	8 cut(s)	82, 243, 246, 812, 835, 2214, 2248, 2909
SspDI	GGCGCC	1 cut(s)	1150
SspI	AATATT	1 cut(s)	2533
SspMI	CTAG	6 cut(s)	930, 1530, 1761, 1974, 2994, 3394
SstI	GAGCTC	1 cut(s)	1301
StuI	AGGCCT	1 cut(s)	3340
StyI	CCWWGG	5 cut(s)	216, 1154, 1938, 2044, 2221
TaiI	ACGT	2 cut(s)	2525, 3057
TatI	WGTACW	2 cut(s)	3297, 3314
TauI	GCSGC	2 cut(s)	246, 2250
TseFI	GTSAC	2 cut(s)	414, 1742
TseI	GCWGC	5 cut(s)	165, 1279, 2264, 2998, 3124
Tsp45I	GTSAC	2 cut(s)	414, 1742
TspDTI	ATGAA	8 cut(s)	17, 660, 1110, 1535, 2169, 2219, 2882, 3235
TspGWI	ACGGA	2 cut(s)	856, 1458
Van91I	CCANNNNNTGG	2 cut(s)	1523, 1835
VpaK11BI	GGWCC	7 cut(s)	130, 947, 1385, 1574, 3157, 3269, 3325
XceI	RCATGY	2 cut(s)	3023, 3214
XmiI	GTMKAC	3 cut(s)	149, 2144, 3376
XmnI	GAANNNNTTC	3 cut(s)	373, 1235, 1652
XspI	CTAG	6 cut(s)	930, 1530, 1761, 1974, 2994, 3394
Zsp2I	ATGCAT	1 cut(s)	1633

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.