Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00751

Orthogroup ID

OG0012825

Physical Location & Seq

Genomic Coordinates Reverse (-)

280596 .. 283993

Gene Structure 3398 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G016330.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3369 bp

ATGAGATGGTGTGGCCTCACAAACACCCTGTTTTTCCTCAAAGTCTTCTCCTTTCTGTTGTGCTTTTCAGTTTCCGGCGACAAAAACCGCTGGTCGGAGAAGTCGGTTCTGCTCGAGCTGAAGACCTCGGTGTCGGACCCAGATGGGGTTCTGTCGACCTGGGCGCACGGCAGCTCTGATCACCACTGTTCCTGGTTCGGGGTCTCCTGCGACTCGAAATCCAAGGTTGTCTCGCTCAGCGTTGCCGGGAGGAGTGAAAATAAAGGAGGTAACTTTGAAGCTTTTACTTGCTCTGAGACTGTAAAATTTCAATTTCAGTTCGATGGGTTTGGGGCATGGAGGAGGAGTGGTGAGGTTAGTGGTGGGAAATTAGGTGGAAAGCTTTCACCTTTGGTTGGGAAACTTACTGAGCTTAGAGTTTTATCGCTGCCGTTTAATGAACTTAGTGGTGAGATTCCCGAGGAGGTTTGGGGGTTGGAGAAACTTGAAGTGCTTGATCTTGAGGGTAATTTGTTGGAGGGGAAGTTGCCGAGTTGGTTCTCGGGTTTGAGAAAGTTGAGGGTTTTCAATGTTGGGTTTAATAGGATTGGTGGGGAGGTTCCGGTTTCGCTTTCGAAATGTAGGGAGTTGGAGGTCTTGAGTTTAGCTGGAAATGAAGTGAGTGGAGCCATCCCTGTGTTTTTTGGTGGTTTTGCAAAGTTAAATGGATCTATTCCGGCCAAATTTGGAAGGTCTTGTTTGAATCTTGAGCATTTTGATGTGTCGGGGAATTTCCTTGTTGGGAATATTCCGCCTACTTTGGGGAGTTGTCTGCGGTTACGGACGCTATTGTTGTTTTCAAATACTCTGGATGGTGGCATTCCTCGTGAACTTGGTAAGATTCGGGGGCTTGAAGTTCTGGATGTGTCTAGAAATAGCCTTAGCGGTCCAATCCCCGCTGAGCTCGGACAGTGTGTCAATTTGTCGGTACTTGTCCTTTCGAGTCTTTTTAATCCGTTGCCAATCAATCAGAATGCAAATGGAGATTCATCGGTTAACTCATATAAAGGAGTGGATGATGATTACAATTTTTATGAAGGCTCCATTCCCCAGGAGATTACAGGCTTACCAAATTTGAGAATAGTTTGGGCGCCAAGGGCAACCCTCGAAGGCCAGTTTCCGAGCAATTGGGGTGGTTGTGAGAACTTGGAAATGGTGAACTTGGCTCAGAACCTTTTCACTGGAGAAGTGATTGGAGTGTTTGATAGATGCAAGAAGCTGCAGTATCTGAATTTGAGCTCAAATAAGCTGAGTGGGAAGCTTGATGACAAACTCCCAGTTCCTTGTATGACCGTTTTCAGTGTCAGTGGGAACCTCTTGTCTGGACCCATCCCCACATTTAATTTCGCAGTGTGCCCCCACGTGCCCCGAAATTCAGATCTTGTCCGAGTCCAGAATCCATCATTTGCATATCAAGTTCTCTTTACTTGCAGAACTTATCTTGACACCCATTTACCACTTTTTGGTGCTAGTTTCACATTGATTCACGATTTTAGTGGTAACAACTTCACTGGTCCAATCCAACACCTTCCTCTTGCACCTGAGAGGTTGGGGAAGCGAACTGTTTATGCATTTCTTGCTGGTGGGAACAAGTTCACTGGATCATTTACTGAAACCTTAAAAGGAAAGTGTGATGGCTTACATGGAATGATATTTAATGTTAGCAACAACAAGTTATCAGGCCACATTCCTTTCAAGATTGGCAAGATGTGCTGGTCTCTCAGACTCTTGGATGCCTCTGGAAATCTCTTATCTGGTTCAATACCTCCAGATCTTGGGGATGTGAAGGCTCTTGTTTTTCTTGACTTGAGCAGGAACCAGTTGCAGGGTCAAATTCCCGCAGGTATCAGTAATTTGAAGTATCTCAAGTATCTATCCTTGGCTAATAACAACCTTACTGGTACGATTCCTGCTAGCTTTGTGGAGTTACGCTCCCTTGAAGTGTTAAAGCTATCTTCAAACTCTCTTTCTGGTGATATCCCGCAAGGTCTTGTTAAGTTGAAAAACCTAACTATTTTTAGGCTTGACAACAATAAGCTCTCTGGCCGCATCCCTTCTGGTTTGACTAATGTGAGATCCCTGTCTACATTTAATGTCTCATATAATAACTTGTCTGGTTCATTTCCATTGAACAATAATATGATGAACTGTAGCGGTGTCCTTGGAAACCCTTTCGTTAATCAATGCCGCATTGTTTCCCTTGCTGCGCCATACTCAGCTCAGCCGGTTAGCTCTGCCAATTCACCCCCTGATTATCAGTCAGCAAGTGCTCCTGGAAAGGATGGAATAAACTCAATTGAGATTGCATCCATAGTATCTGCATCAGCTATCGTGTTGGTTCTCTTCACTCTTGTTATCCTCTTCTTTTACACAAGAAAATGGATTCCAGATTCCAGAGTTCAGGGTTTTGAAAATAAAGAAATTACAATTTTCACGGAAATTGGGGCACCATTGACGTTTGAGAATATTGTTCAAGCAACAGGGAATTTTAATGCCAGTAACTACATTGGGAGTGGAGGATTTGGGGCAACATACAAAGCAGAAATTGCTCCAGGAACCATAATAGCTGTGAAGAGGCTTGCCGTTGGAAGGTTTCACGGTGTTCAACAGTTCCATGCTGAGATTAAGACCCTCGGAAGGGTGAGACACCCCAACCTGGTAACTTTAATAGGTTACCATGCCAGTGAAACCGAGATGCTACTCATATATAATTATTTACCAGGAGGGAATTTGGAAAATTTTATTCAGGAAAGATCTAGAAGATCTTTTACTTGGAAGATTCTCCACAAGATTGCTCTGGATATTGCCCATGCACTTTCTTATCTGCATGACGAGTGTATCCCGCGTGTCCTACACCGTGATGTCAAGCCAAGCAATATACTGTTAGATGATAACTTGAATGCTTATTTGTCTGACTTTGGATTGTCTAGGCTGCTGGGAACTTCTGAAACGCATGCTACAACTGGTGTTGCAGGAACTTTTGGGTACGTAGCACCCGAGTATGCTATGACCTGTCGTGTGTCTGAGAAGGCTGATGTTTACAGTTACGGTGTTGTGCTGCTTGAATTGATTTCTGATAAGAAAGCCCTGGACCCATCATTTTCTTCACATGGAAATGGTTTCAACATTGTTTCTTGGGCGTGCATGCTATTAAGAATGGGTCGGGCTAAGGACGTATTCATGGAAGGACTATGGGAGGCAGGACCCGAAGATGATCTGGTTGAGATGCTGTACTTGGCTGTCAAATGTACTGTTGAGACCCTCTCCATTAGGCCTACAATGAAGCAAGTTGTCCAAATACTGAAGCGAATACAACCTGCTTCAACCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000578 GO:0001101 GO:0003002 GO:0003006 GO:0005575 GO:0005623 GO:0005886 GO:0006725 GO:0006950 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009555 GO:0009628 GO:0009698 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009808 GO:0009846 GO:0009856 GO:0009880 GO:0009888 GO:0009908 GO:0009942 GO:0009945 GO:0009956 GO:0009987 GO:0010035 GO:0010073 GO:0010152 GO:0010154 GO:0016020 GO:0016043 GO:0019748 GO:0021700 GO:0022414 GO:0022607 GO:0032501 GO:0032502 GO:0042221 GO:0043933 GO:0044085 GO:0044237 GO:0044464 GO:0044706 GO:0048229 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048507 GO:0048508 GO:0048608 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0051259 GO:0051260 GO:0051704 GO:0061458 GO:0065003 GO:0071704 GO:0071840 GO:0071944 GO:0090567 GO:0099402 GO:1901360 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase

Protein Analysis

1122

Amino Acids

122.5

Weight (kDa)

8.29

Isoelectric Point (pI)

32.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	32 - 71	8.3e-11	Leucine rich repeat N-terminal domain
LRR_14	PF23598	132 - 216	7.7e-08	Leucine-rich repeat region
LRR_14	PF23598	603 - 711	8.5e-11	Leucine-rich repeat region
LRR_8	PF13855	630 - 669	2.2e-07	Leucine rich repeat
Pkinase	PF00069	845 - 1046	5.6e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	846 - 1113	1.3e-39	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0012825)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G69270
fragaria_vesca	FvH4_4g29970
malus_domestica	MD13G1062000.v1.1 MD16G1060500.v1.1
prunus_persica	Prupe.1G287800_v2.0.a1
pyrus_communis	pycom13g05450 pycom16g05270
rosa_chinensis	RchiOBHm_Chr4g0438241
rosa_laevigata	RLG00000006378
rosa_multiflora	Rmu_sc0002682.1_g000004
rosa_roxburghii	Rroxscaffold_5G00379330
rosa_rugosa	Rorug04G0308300
rosa_samantha	Rh4AG359300 Rh4BG370100 Rh4CG384300 Rh4DG365200
rosa_wichuraiana	Rw0G006390 Rw0G016330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	130
Acc36I	ACCTGC	2 cut(s)	1871, 3364
AccB1I	GGYRCC	2 cut(s)	1129, 2485
AccB7I	CCANNNNNTGG	2 cut(s)	1502, 1814
AccI	GTMKAC	2 cut(s)	155, 2123
AccII	CGCG	1 cut(s)	2884
AclWI	GGATC	3 cut(s)	715, 1648, 2109
AcoI	YGGCCR	2 cut(s)	717, 2083
AcuI	CTGAAG	2 cut(s)	140, 3362
AcvI	CACGTG	1 cut(s)	1402
AcyI	GRCGYC	1 cut(s)	1130
AfaI	GTAC	5 cut(s)	969, 1942, 3026, 3272, 3289
AhdI	GACNNNNNGTC	1 cut(s)	953
AjnI	CCWGG	8 cut(s)	158, 191, 1089, 2311, 2590, 2694, 2758, 3126
Alw21I	GWGCWC	3 cut(s)	945, 1280, 2311
Alw26I	GTCTC	7 cut(s)	208, 235, 290, 1761, 2140, 2677, 3290
AlwI	GGATC	3 cut(s)	715, 1648, 2109
AlwNI	CAGNNNCTG	1 cut(s)	1267
Ama87I	CYCGRG	4 cut(s)	113, 458, 541, 3035
AoxI	GGCC	6 cut(s)	13, 717, 1150, 1720, 2083, 3311
ApeKI	GCWGC	6 cut(s)	171, 427, 1258, 2243, 2971, 3097
Asp700I	GAANNNNTTC	3 cut(s)	382, 1214, 1631
AspLEI	GCGC	3 cut(s)	166, 1132, 2248
AspS9I	GGNCC	6 cut(s)	136, 926, 1364, 1553, 3130, 3242
AsuC2I	CCSGG	1 cut(s)	247
AsuHPI	GGTGA	8 cut(s)	173, 362, 378, 461, 1207, 2024, 2274, 2692
AsuII	TTCGAA	1 cut(s)	614
AsuNHI	GCTAGC	1 cut(s)	1952
AvaI	CYCGRG	4 cut(s)	113, 458, 541, 3035
AvaII	GGWCC	6 cut(s)	136, 926, 1364, 1553, 3130, 3242
BaeGI	GKGCMC	3 cut(s)	1397, 1407, 2488
BaeI	ACNNNNGTAYC	2 cut(s)	2860, 2893
BanI	GGYRCC	2 cut(s)	1129, 2485
BanII	GRGCYC	2 cut(s)	945, 1280
BarI	GAAGNNNNNNTAC	2 cut(s)	2791, 2823
BauI	CACGAG	1 cut(s)	864
BbrPI	CACGTG	1 cut(s)	1402
BbsI	GAAGAC	2 cut(s)	37, 128
Bbv12I	GWGCWC	3 cut(s)	945, 1280, 2311
BbvI	GCAGC	6 cut(s)	183, 414, 1245, 2230, 2958, 3084
BccI	CCATC	9 cut(s)	137, 317, 677, 845, 1376, 1447, 1667, 2315, 3142
BceAI	ACGGC	3 cut(s)	184, 415, 2606
BciT130I	CCWGG	8 cut(s)	160, 193, 1091, 2313, 2592, 2696, 2760, 3128
BciVI	GTATCC	1 cut(s)	2888
BclI	TGATCA	1 cut(s)	178
BcnI	CCSGG	1 cut(s)	247
BcoDI	GTCTC	7 cut(s)	208, 235, 290, 1761, 2140, 2677, 3290
BfaI	CTAG	6 cut(s)	909, 1509, 1953, 2796, 2967, 3367
BfmI	CTRYAG	2 cut(s)	1259, 2188
BfoI	RGCGCY	1 cut(s)	1133
BfuAI	ACCTGC	2 cut(s)	1871, 3364
BfuI	GTATCC	1 cut(s)	2888
BglII	AGATCT	4 cut(s)	1417, 1810, 2792, 2801
BisI	GCNGC	8 cut(s)	172, 428, 1259, 2086, 2227, 2244, 2972, 3098
BlpI	GCTNAGC	3 cut(s)	236, 939, 2259
BlsI	GCNGC	8 cut(s)	173, 429, 1260, 2087, 2228, 2245, 2973, 3099
Bme1390I	CCNGG	9 cut(s)	160, 193, 247, 1091, 2313, 2592, 2696, 2760, 3128
Bme18I	GGWCC	6 cut(s)	136, 926, 1364, 1553, 3130, 3242
BmeRI	GACNNNNNGTC	1 cut(s)	953
BmeT110I	CYCGRG	4 cut(s)	113, 458, 541, 3035
BmgT120I	GGNCC	6 cut(s)	136, 926, 1364, 1553, 3130, 3242
BmrFI	CCNGG	9 cut(s)	160, 193, 247, 1091, 2313, 2592, 2696, 2760, 3128
BmrI	ACTGGG	1 cut(s)	1310
BmsI	GCATC	7 cut(s)	1238, 1762, 2097, 2354, 2369, 2724, 3255
BmtI	GCTAGC	1 cut(s)	1956
BmuI	ACTGGG	1 cut(s)	1310
BpiI	GAAGAC	2 cut(s)	37, 128
BplI	GAGNNNNNCTC	4 cut(s)	1955, 1987, 3287, 3319
BpmI	CTGGAG	3 cut(s)	1242, 1791, 2574
Bpu10I	CCTNAGC	2 cut(s)	920, 3207
Bpu1102I	GCTNAGC	3 cut(s)	236, 939, 2259
Bpu14I	TTCGAA	1 cut(s)	614
BpuEI	CTTGAG	5 cut(s)	521, 658, 767, 1867, 1889
BpuMI	CCSGG	1 cut(s)	247
BsaAI	YACGTR	2 cut(s)	1402, 3028
BsaHI	GRCGYC	1 cut(s)	1130
BsaI	GGTCTC	3 cut(s)	208, 1761, 3290
BsaWI	WCCGGW	1 cut(s)	601
BsaXI	ACNNNNNCTCC	6 cut(s)	331, 334, 361, 364, 509, 539
Bse118I	RCCGGY	1 cut(s)	2263
BseBI	CCWGG	8 cut(s)	160, 193, 1091, 2313, 2592, 2696, 2760, 3128
BseRI	GAGGAG	4 cut(s)	265, 355, 358, 476
BseSI	GKGCMC	3 cut(s)	1397, 1407, 2488
BseXI	GCAGC	6 cut(s)	183, 414, 1245, 2230, 2958, 3084
BseYI	CCCAGC	1 cut(s)	2974
Bsh1236I	CGCG	1 cut(s)	2884
BshFI	GGCC	6 cut(s)	15, 719, 1152, 1722, 2085, 3313
BshNI	GGYRCC	2 cut(s)	1129, 2485
BsiHKAI	GWGCWC	3 cut(s)	945, 1280, 2311
BsiHKCI	CYCGRG	4 cut(s)	113, 458, 541, 3035
BsiSI	CCGG	5 cut(s)	75, 246, 602, 716, 2264
BsmAI	GTCTC	7 cut(s)	208, 235, 290, 1761, 2140, 2677, 3290
BsmI	GAATGC	3 cut(s)	858, 1018, 2944
BsnI	GGCC	6 cut(s)	15, 719, 1152, 1722, 2085, 3313
Bso31I	GGTCTC	3 cut(s)	208, 1761, 3290
BsoBI	CYCGRG	4 cut(s)	113, 458, 541, 3035
Bsp119I	TTCGAA	1 cut(s)	614
Bsp1286I	GDGCHC	6 cut(s)	945, 1280, 1397, 1407, 2311, 2488
Bsp1720I	GCTNAGC	3 cut(s)	236, 939, 2259
BspANI	GGCC	6 cut(s)	15, 719, 1152, 1722, 2085, 3313
BspFNI	CGCG	1 cut(s)	2884
BspMAI	CTGCAG	1 cut(s)	1263
BspMI	ACCTGC	2 cut(s)	1871, 3364
BspOI	GCTAGC	1 cut(s)	1956
BspPI	GGATC	3 cut(s)	715, 1648, 2109
BspT104I	TTCGAA	1 cut(s)	614
BspT107I	GGYRCC	2 cut(s)	1129, 2485
BspTNI	GGTCTC	3 cut(s)	208, 1761, 3290
BsrFI	RCCGGY	1 cut(s)	2263
BssAI	RCCGGY	1 cut(s)	2263
BssNI	GRCGYC	1 cut(s)	1130
BssSI	CACGAG	1 cut(s)	864
BssT1I	CCWWGG	4 cut(s)	222, 1133, 1917, 2200
Bst2BI	CACGAG	1 cut(s)	864
Bst2UI	CCWGG	8 cut(s)	160, 193, 1091, 2313, 2592, 2696, 2760, 3128
Bst6I	CTCTTC	3 cut(s)	2387, 2405, 2606
BstACI	GRCGYC	1 cut(s)	1130
BstAPI	GCANNNNNTGC	3 cut(s)	1616, 1749, 2585
BstBAI	YACGTR	2 cut(s)	1402, 3028
BstBI	TTCGAA	1 cut(s)	614
BstC8I	GCNNGC	5 cut(s)	1954, 2619, 2994, 3181, 3185
BstEII	GGTNACC	1 cut(s)	2711
BstFNI	CGCG	1 cut(s)	2884
BstH2I	RGCGCY	1 cut(s)	1133
BstHHI	GCGC	3 cut(s)	166, 1132, 2248
BstMAI	GTCTC	7 cut(s)	208, 235, 290, 1761, 2140, 2677, 3290
BstMWI	GCNNNNNNNGC	4 cut(s)	1136, 1616, 1749, 2585
BstNI	CCWGG	8 cut(s)	160, 193, 1091, 2313, 2592, 2696, 2760, 3128
BstNSI	RCATGY	2 cut(s)	2996, 3187
BstPI	GGTNACC	1 cut(s)	2711
BstSCI	CCNGG	9 cut(s)	158, 191, 245, 1089, 2311, 2590, 2694, 2758, 3126
BstSFI	CTRYAG	2 cut(s)	1259, 2188
BstSLI	GKGCMC	3 cut(s)	1397, 1407, 2488
BstSNI	TACGTA	1 cut(s)	3028
BstUI	CGCG	1 cut(s)	2884
BstV1I	GCAGC	6 cut(s)	183, 414, 1245, 2230, 2958, 3084
BstV2I	GAAGAC	2 cut(s)	37, 128
BstX2I	RGATCY	6 cut(s)	707, 1417, 1810, 2114, 2792, 2801
BstYI	RGATCY	6 cut(s)	707, 1417, 1810, 2114, 2792, 2801
BsuI	GTATCC	1 cut(s)	2888
BsuRI	GGCC	6 cut(s)	15, 719, 1152, 1722, 2085, 3313
BtsI	GCAGTG	1 cut(s)	1395
BtsIMutI	CAGTG	9 cut(s)	184, 956, 1218, 1345, 1351, 1395, 1548, 1635, 2728
BveI	ACCTGC	2 cut(s)	1871, 3364
Cac8I	GCNNGC	5 cut(s)	1954, 2619, 2994, 3181, 3185
CaiI	CAGNNNCTG	1 cut(s)	1267
CfoI	GCGC	3 cut(s)	166, 1132, 2248
Cfr10I	RCCGGY	1 cut(s)	2263
Cfr13I	GGNCC	6 cut(s)	136, 926, 1364, 1553, 3130, 3242
CseI	GACGC	1 cut(s)	832
CsiI	ACCWGGT	1 cut(s)	2694
Csp6I	GTAC	5 cut(s)	968, 1941, 3025, 3271, 3288
CspCI	CAANNNNNGTGG	2 cut(s)	1153, 1188
CviQI	GTAC	5 cut(s)	968, 1941, 3025, 3271, 3288
DinI	GGCGCC	1 cut(s)	1131
DrdI	GACNNNNNNGTC	1 cut(s)	130
DriI	GACNNNNNGTC	1 cut(s)	953
DseDI	GACNNNNNNGTC	1 cut(s)	130
EaeI	YGGCCR	2 cut(s)	717, 2083
Eam1104I	CTCTTC	3 cut(s)	2387, 2405, 2606
Eam1105I	GACNNNNNGTC	1 cut(s)	953
EarI	CTCTTC	3 cut(s)	2387, 2405, 2606
EciI	GGCGGA	1 cut(s)	780
Ecl136II	GAGCTC	2 cut(s)	943, 1278
Eco105I	TACGTA	1 cut(s)	3028
Eco130I	CCWWGG	4 cut(s)	222, 1133, 1917, 2200
Eco147I	AGGCCT	1 cut(s)	3313
Eco24I	GRGCYC	2 cut(s)	945, 1280
Eco31I	GGTCTC	3 cut(s)	208, 1761, 3290
Eco32I	GATATC	1 cut(s)	2017
Eco47I	GGWCC	6 cut(s)	136, 926, 1364, 1553, 3130, 3242
Eco53kI	GAGCTC	2 cut(s)	943, 1278
Eco57I	CTGAAG	2 cut(s)	140, 3362
Eco72I	CACGTG	1 cut(s)	1402
Eco88I	CYCGRG	4 cut(s)	113, 458, 541, 3035
Eco91I	GGTNACC	1 cut(s)	2711
EcoICRI	GAGCTC	2 cut(s)	943, 1278
EcoO109I	RGGNCCY	1 cut(s)	3242
EcoO65I	GGTNACC	1 cut(s)	2711
EcoRII	CCWGG	8 cut(s)	158, 191, 1089, 2311, 2590, 2694, 2758, 3126
EcoRV	GATATC	1 cut(s)	2017
EcoT14I	CCWWGG	4 cut(s)	222, 1133, 1917, 2200
EcoT22I	ATGCAT	1 cut(s)	1612
EcoT38I	GRGCYC	2 cut(s)	945, 1280
EgeI	GGCGCC	1 cut(s)	1131
EheI	GGCGCC	1 cut(s)	1131
ErhI	CCWWGG	4 cut(s)	222, 1133, 1917, 2200
FauI	CCCGC	4 cut(s)	943, 1885, 2028, 2889
FbaI	TGATCA	1 cut(s)	178
FblI	GTMKAC	2 cut(s)	155, 2123
Fnu4HI	GCNGC	8 cut(s)	172, 428, 1259, 2086, 2227, 2244, 2972, 3098
FriOI	GRGCYC	2 cut(s)	945, 1280
Fsp4HI	GCNGC	8 cut(s)	172, 428, 1259, 2086, 2227, 2244, 2972, 3098
FspBI	CTAG	6 cut(s)	909, 1509, 1953, 2796, 2967, 3367
GlaI	GCGC	3 cut(s)	165, 1131, 2247
GluI	GCNGC	8 cut(s)	172, 428, 1259, 2086, 2227, 2244, 2972, 3098
GsaI	CCCAGC	1 cut(s)	2978
GsuI	CTGGAG	3 cut(s)	1242, 1791, 2574
HaeII	RGCGCY	1 cut(s)	1133
HaeIII	GGCC	6 cut(s)	15, 719, 1152, 1722, 2085, 3313
HapII	CCGG	5 cut(s)	75, 246, 602, 716, 2264
HgaI	GACGC	1 cut(s)	832
HhaI	GCGC	3 cut(s)	166, 1132, 2248
Hin1I	GRCGYC	1 cut(s)	1130
Hin6I	GCGC	3 cut(s)	164, 1130, 2246
HinP1I	GCGC	3 cut(s)	164, 1130, 2246
HincII	GTYRAC	2 cut(s)	156, 1036
HindII	GTYRAC	2 cut(s)	156, 1036
HindIII	AAGCTT	3 cut(s)	279, 380, 1298
HpaI	GTTAAC	1 cut(s)	1036
HpaII	CCGG	5 cut(s)	75, 246, 602, 716, 2264
HphI	GGTGA	8 cut(s)	173, 362, 378, 461, 1207, 2024, 2274, 2692
Hpy166II	GTNNAC	7 cut(s)	156, 869, 1036, 1198, 1635, 2124, 3079
Hpy8I	GTNNAC	7 cut(s)	156, 869, 1036, 1198, 1635, 2124, 3079
HpyCH4IV	ACGT	4 cut(s)	1401, 2495, 3027, 3213
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1136, 1616, 1749, 2585
HpySE526I	ACGT	4 cut(s)	1401, 2495, 3027, 3213
Hsp92I	GRCGYC	1 cut(s)	1130
HspAI	GCGC	3 cut(s)	164, 1130, 2246
KasI	GGCGCC	1 cut(s)	1129
Ksp22I	TGATCA	1 cut(s)	178
KspAI	GTTAAC	1 cut(s)	1036
LmnI	GCTCC	5 cut(s)	665, 1085, 1976, 2314, 2593
Lsp1109I	GCAGC	6 cut(s)	183, 414, 1245, 2230, 2958, 3084
LweI	GCATC	7 cut(s)	1238, 1762, 2097, 2354, 2369, 2724, 3255
MabI	ACCWGGT	1 cut(s)	2694
MaeI	CTAG	6 cut(s)	909, 1509, 1953, 2796, 2967, 3367
MaeII	ACGT	4 cut(s)	1401, 2495, 3027, 3213
MaeIII	GTNAC	8 cut(s)	269, 816, 1538, 1965, 2537, 2698, 2711, 3083
MfeI	CAATTG	2 cut(s)	1165, 2334
MflI	RGATCY	6 cut(s)	707, 1417, 1810, 2114, 2792, 2801
MhlI	GDGCHC	6 cut(s)	945, 1280, 1397, 1407, 2311, 2488
Mly113I	GGCGCC	1 cut(s)	1130
MlyI	GAGTC	4 cut(s)	206, 991, 1437, 1758
MmeI	TCCRAC	7 cut(s)	75, 114, 456, 495, 609, 1585, 2605
Mph1103I	ATGCAT	1 cut(s)	1612
MroXI	GAANNNNTTC	3 cut(s)	382, 1214, 1631
MslI	CAYNNNNRTG	5 cut(s)	674, 756, 2721, 2898, 3153
MspA1I	CMGCKG	2 cut(s)	90, 938
MspI	CCGG	5 cut(s)	75, 246, 602, 716, 2264
MspR9I	CCNGG	9 cut(s)	160, 193, 247, 1091, 2313, 2592, 2696, 2760, 3128
MunI	CAATTG	2 cut(s)	1165, 2334
Mva1269I	GAATGC	3 cut(s)	858, 1018, 2944
MvaI	CCWGG	8 cut(s)	160, 193, 1091, 2313, 2592, 2696, 2760, 3128
MvnI	CGCG	1 cut(s)	2884
MwoI	GCNNNNNNNGC	4 cut(s)	1136, 1616, 1749, 2585
NarI	GGCGCC	1 cut(s)	1130
NciI	CCSGG	1 cut(s)	247
NheI	GCTAGC	1 cut(s)	1952
NmeAIII	GCCGAG	1 cut(s)	555
NsiI	ATGCAT	1 cut(s)	1612
NspI	RCATGY	2 cut(s)	2996, 3187
NspV	TTCGAA	1 cut(s)	614
PaeI	GCATGC	2 cut(s)	2996, 3187
PaeR7I	CTCGAG	1 cut(s)	113
PceI	AGGCCT	1 cut(s)	3313
PcsI	WCGNNNNNNNCGW	1 cut(s)	3033
PctI	GAATGC	3 cut(s)	858, 1018, 2944
PdmI	GAANNNNTTC	3 cut(s)	382, 1214, 1631
PflMI	CCANNNNNTGG	2 cut(s)	1502, 1814
PfoI	TCCNGGA	2 cut(s)	2311, 2590
PkrI	GCNGC	8 cut(s)	173, 429, 1260, 2087, 2228, 2245, 2973, 3099
PleI	GAGTC	4 cut(s)	206, 990, 1436, 1758
PluTI	GGCGCC	1 cut(s)	1133
PmaCI	CACGTG	1 cut(s)	1402
PmlI	CACGTG	1 cut(s)	1402
PpsI	GAGTC	4 cut(s)	206, 990, 1436, 1758
Ppu21I	YACGTR	2 cut(s)	1402, 3028
PpuMI	RGGWCCY	1 cut(s)	3242
Psp124BI	GAGCTC	2 cut(s)	945, 1280
Psp5II	RGGWCCY	1 cut(s)	3242
Psp6I	CCWGG	8 cut(s)	158, 191, 1089, 2311, 2590, 2694, 2758, 3126
PspCI	CACGTG	1 cut(s)	1402
PspEI	GGTNACC	1 cut(s)	2711
PspFI	CCCAGC	1 cut(s)	2974
PspGI	CCWGG	8 cut(s)	158, 191, 1089, 2311, 2590, 2694, 2758, 3126
PspPI	GGNCC	6 cut(s)	136, 926, 1364, 1553, 3130, 3242
PspPPI	RGGWCCY	1 cut(s)	3242
PspXI	VCTCGAGB	1 cut(s)	113
PstI	CTGCAG	1 cut(s)	1263
PstNI	CAGNNNCTG	1 cut(s)	1267
PsuI	RGATCY	6 cut(s)	707, 1417, 1810, 2114, 2792, 2801
RsaI	GTAC	5 cut(s)	969, 1942, 3026, 3272, 3289
RsaNI	GTAC	5 cut(s)	968, 1941, 3025, 3271, 3288
RseI	CAYNNNNRTG	5 cut(s)	674, 756, 2721, 2898, 3153
SacI	GAGCTC	2 cut(s)	945, 1280
SalI	GTCGAC	1 cut(s)	154
SatI	GCNGC	8 cut(s)	172, 428, 1259, 2086, 2227, 2244, 2972, 3098
Sau96I	GGNCC	6 cut(s)	136, 926, 1364, 1553, 3130, 3242
SchI	GAGTC	4 cut(s)	206, 991, 1437, 1758
ScrFI	CCNGG	9 cut(s)	160, 193, 247, 1091, 2313, 2592, 2696, 2760, 3128
SduI	GDGCHC	6 cut(s)	945, 1280, 1397, 1407, 2311, 2488
SexAI	ACCWGGT	1 cut(s)	2694
SfaNI	GCATC	7 cut(s)	1238, 1762, 2097, 2354, 2369, 2724, 3255
SfcI	CTRYAG	2 cut(s)	1259, 2188
SfoI	GGCGCC	1 cut(s)	1131
Sfr274I	CTCGAG	1 cut(s)	113
SfuI	TTCGAA	1 cut(s)	614
SinI	GGWCC	6 cut(s)	136, 926, 1364, 1553, 3130, 3242
SlaI	CTCGAG	1 cut(s)	113
SmiMI	CAYNNNNRTG	5 cut(s)	674, 756, 2721, 2898, 3153
SmlI	CTYRAG	6 cut(s)	113, 500, 637, 746, 1846, 1904
SmoI	CTYRAG	6 cut(s)	113, 500, 637, 746, 1846, 1904
SnaBI	TACGTA	1 cut(s)	3028
SphI	GCATGC	2 cut(s)	2996, 3187
SseBI	AGGCCT	1 cut(s)	3313
SspDI	GGCGCC	1 cut(s)	1129
SspI	AATATT	2 cut(s)	787, 2506
SspMI	CTAG	6 cut(s)	909, 1509, 1953, 2796, 2967, 3367
SstI	GAGCTC	2 cut(s)	945, 1280
StuI	AGGCCT	1 cut(s)	3313
StyD4I	CCNGG	9 cut(s)	158, 191, 245, 1089, 2311, 2590, 2694, 2758, 3126
StyI	CCWWGG	4 cut(s)	222, 1133, 1917, 2200
TaiI	ACGT	4 cut(s)	1404, 2498, 3030, 3216
TaqI	TCGA	7 cut(s)	114, 155, 215, 321, 614, 980, 1146
TatI	WGTACW	2 cut(s)	3270, 3287
TauI	GCSGC	2 cut(s)	2088, 2229
TscAI	CASTG	9 cut(s)	191, 956, 1225, 1345, 1351, 1395, 1555, 1642, 2728
TseI	GCWGC	6 cut(s)	171, 427, 1258, 2243, 2971, 3097
TspDTI	ATGAA	8 cut(s)	453, 669, 1017, 1089, 2148, 2198, 3208, 3335
TspGWI	ACGGA	3 cut(s)	835, 984, 2489
TspRI	CASTG	9 cut(s)	191, 956, 1225, 1345, 1351, 1395, 1555, 1642, 2728
Van91I	CCANNNNNTGG	2 cut(s)	1502, 1814
VpaK11BI	GGWCC	6 cut(s)	136, 926, 1364, 1553, 3130, 3242
XbaI	TCTAGA	2 cut(s)	908, 2795
XceI	RCATGY	2 cut(s)	2996, 3187
XhoI	CTCGAG	1 cut(s)	113
XmiI	GTMKAC	2 cut(s)	155, 2123
XmnI	GAANNNNTTC	3 cut(s)	382, 1214, 1631
XspI	CTAG	6 cut(s)	909, 1509, 1953, 2796, 2967, 3367
Zsp2I	ATGCAT	1 cut(s)	1612

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.