Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0012825

Physical Location & Seq

Genomic Coordinates Reverse (-)

3638516 .. 3640897

Gene Structure 2382 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g05450.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2382 bp

ATGCTTGAAGTTCTAGATGTTTCAAGAAATAGCCTTAGTGGCCCAGTCCCCGCTGAGCTTGGACAATGTATCAATTTATCTGTTCTTGTCCTATCGAATCTTTTTAATCCATTGACAACCAATCAGAATACAAATGGAGATACATCAATTGATTTATCTGGTGGTTTGGTGGATGATTACAATTATTACAAAGGCTCCATTCCAGAGGAAATTACAACCCTTCCAAATTTGAAAGTAGTTTGGGCTCCAAGGGCAACCCTTGAAGGAAAGCTTCCAAGCAATTGGGGTGGTTGTGAGAACTTGGAAATGTTGAACTTAGCTCGGAACCTTTTCAGCGGAGAAGTCACTGGAGTATTTGAAAGATGCAAGAAGCTGCATTATCTAAATTTGGGATCAAATAAGCTGAGTGGGAAGATCGATGAGAAGCTTCCAGTTCCATGTATGACTGTTTTCAATGTCAGTGGGAACTTCATGTCTGGACCTGTCCCCGAGTTTCTGTACAGATTGTGCCCCCAGGTGCCCCCAAATTCAGATCTTGTCCGAGTCAACAATCCATCATTTCCATATCAAGTGCTCTTTACTTGTCAAACTCAGCTTGATAGCCGTTTGCCTCTTTCAGGTGGTAGTTTCACTGTGGTTCATGATTTTAGCGGTAACAACTTCACTGGTCCAATCCAACACCTCCCTCTTGCAACTGAGAGACTGGGGAAGCAGACTGTTTATGCATTTCTTGCTGCTGGGAACAAGCTCACGGGATCATTTCCTGAAACCTTACTAGGAAAGTGTGACGGATTAGATGGAATGATTATTGATGTTAGCGACAATAAGTTGTCAGGTCAAATTCCTTTTCAGATTGGTGCGATGTGCAGATCTCTTAGATTCCTGGATGCCTCTGGCAATCTTTTATCTGGGTTAATACCTTCAGATATTGGGCATTTGGAATCTCTTGTCTTTCTTGACTTGAGCTGGAACCAGCTGCAGGGTCAAATTCCTGCAGGTATCAGTCATTTGAAGTATCTTAAGTATCTGTCCCTGGACAACAACAATCTCACTGGTGCAATTCCTGATAGCTTTGTGTGGTTGCACTCCCTCGAAGTTCTAAAGCTGTCTTCAAATTCTCTTTCTGGGGATATTCCGCAAGGTCTTGTGAACTTGAAAAATATAACTGTTTTTCTGCTCGACAATAATAAACTCTCTGGGCACATCCCTTCAGGCTTGACTAATCTGAAATCCCTATCTACATTCAATGCCTCCTTCAATAACCTGTCTGGTTCATTTCCATTGAACAATAGCGTGATGAACTGCAGCGGTGTCCTTGGGAACCCTTTCCTTATTCCATGCCATATTGTTTCACTAACTGCTCCATCTTCAGATCAGCCAGATAGTTATGGGAGTTCACAACATAATCCTGATTCTCTATCAGCAACTACTGGTGTTGATGATAATAGTGGATTAGGCACAATCGAGATCGCATCCATAGCAGCTGCATCAGCTGTTGTTTTGGTTCTGCTCTCTCTTGTTATCCTGTTCTTTTATATGAGAAAGTGGATACCAGATTCCAGGGTTCAGGGTTTTGAATATAAAGAAATGACTCTGTTTACAGACATTGGGGCTCCGTTGACATTTGAGAATATTGTTCAAGCAACAGGGAATTTTAATGGCAGCTACCACATTGGCAGCGGAGGATTTGGGGCCACTTACAAAGCCGAAATTGCTCCAGGAATCACTGTTGCTGTGAAAAGGCTAGCTGTTGGAAGGTTTCACGGTGTTCAACAGTTTCATGCTGAGATTAAAACCCTTGGTAGGGTGAGACACCCAAACCTGGTGACTTTAATAGGTTACCATGCCAGTGAAGCTGAGATGTTGCTCATATATAATTATTTACCAGGAGGGAATTTGGAAAACTTTATCAAGGAGAGATCTCAGAGGCCTTTTAATTGGCAAATTCTCCACAAGATTGCTTTGCATATAGCCCGTGCACTTGCTTATCTGCATAGCGAGTGTATTCCACGTGTCCTACACCGTGATGTCAAGCCAAGTAACATACTGTTGGATGATGAGTTCAATGCTTACTTGTCTGACTTTGGATTATCTAGGCTTTTGGGAACTTCAGAAACACACGCAACAACTGGTCCAGCAGGGACTTTTGGGTACGTAGCACCAGAGTATGCAATGACTTGCCATGTGTCTGAAAAGTCTGATGTTTACAGTTACGGTGTGGTGCTGCTTGAATTGATGTCGTACAAAAAACCCTTGGACCCTTCGTTTTCATCACATGGTGATGGTTTCAACATTGTCTCTTGGGTGGACATGCTGTTAGAAAAGGGTCAGGATAAGGAGGTCTTCATAGAAGGGCTATGGGATGCAGGACCCCAGAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000578 GO:0001101 GO:0003002 GO:0003006 GO:0005575 GO:0005623 GO:0005886 GO:0006725 GO:0006950 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009555 GO:0009628 GO:0009698 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009808 GO:0009846 GO:0009856 GO:0009880 GO:0009888 GO:0009908 GO:0009942 GO:0009945 GO:0009956 GO:0009987 GO:0010035 GO:0010073 GO:0010152 GO:0010154 GO:0016020 GO:0016043 GO:0019748 GO:0021700 GO:0022414 GO:0022607 GO:0032501 GO:0032502 GO:0042221 GO:0043933 GO:0044085 GO:0044237 GO:0044464 GO:0044706 GO:0048229 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048507 GO:0048508 GO:0048608 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0051259 GO:0051260 GO:0051704 GO:0061458 GO:0065003 GO:0071704 GO:0071840 GO:0071944 GO:0090567 GO:0099402 GO:1901360 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase

Protein Analysis

794

Amino Acids

86.39

Weight (kDa)

5.6

Isoelectric Point (pI)

33.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_14	PF23598	334 - 415	1.5e-07	Leucine-rich repeat region
LRR_8	PF13855	335 - 374	8e-07	Leucine rich repeat
Pkinase	PF00069	556 - 753	6.1e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	557 - 749	1.3e-40	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012825)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G69270
fragaria_vesca	FvH4_4g29970
malus_domestica	MD13G1062000.v1.1 MD16G1060500.v1.1
prunus_persica	Prupe.1G287800_v2.0.a1
pyrus_communis	pycom13g05450 pycom16g05270
rosa_chinensis	RchiOBHm_Chr4g0438241
rosa_laevigata	RLG00000006378
rosa_multiflora	Rmu_sc0002682.1_g000004
rosa_roxburghii	Rroxscaffold_5G00379330
rosa_rugosa	Rorug04G0308300
rosa_samantha	Rh4AG359300 Rh4BG370100 Rh4CG384300 Rh4DG365200
rosa_wichuraiana	Rw0G006390 Rw0G016330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	986
AccB1I	GGYRCC	1 cut(s)	517
AciI	CCGC	6 cut(s)	51, 336, 651, 1136, 1308, 1680
AclWI	GGATC	2 cut(s)	400, 763
AcsI	RAATTY	9 cut(s)	226, 385, 526, 840, 987, 1114, 1651, 1894, 1944
AcuI	CTGAAG	4 cut(s)	906, 1194, 1353, 2094
AcvI	CACGTG	1 cut(s)	2012
AdeI	CACNNNGTG	1 cut(s)	2279
AfaI	GTAC	3 cut(s)	500, 2153, 2243
AfiI	CCNNNNNNNGG	5 cut(s)	617, 979, 1803, 1804, 1822
AflII	CTTAAG	1 cut(s)	1019
AflIII	ACRYGT	1 cut(s)	2011
AjnI	CCWGG	7 cut(s)	513, 882, 1032, 1559, 1717, 1821, 1885
AloI	GAACNNNNNNTCC	2 cut(s)	2045, 2077
Alw21I	GWGCWC	2 cut(s)	576, 1981
Alw26I	GTCTC	3 cut(s)	694, 1804, 2302
Alw44I	GTGCAC	1 cut(s)	1977
AlwI	GGATC	2 cut(s)	400, 763
Ama87I	CYCGRG	1 cut(s)	488
AoxI	GGCC	3 cut(s)	40, 1692, 1928
ApaLI	GTGCAC	1 cut(s)	1977
ApeKI	GCWGC	9 cut(s)	373, 734, 976, 1305, 1481, 1484, 1662, 1677, 2224
ApoI	RAATTY	9 cut(s)	226, 385, 526, 840, 987, 1114, 1651, 1894, 1944
Asp700I	GAANNNNTTC	2 cut(s)	329, 1325
AspS9I	GGNCC	7 cut(s)	41, 479, 668, 1692, 2132, 2257, 2369
AsuHPI	GGTGA	3 cut(s)	1819, 1837, 2291
AsuNHI	GCTAGC	1 cut(s)	1744
AvaI	CYCGRG	1 cut(s)	488
AvaII	GGWCC	5 cut(s)	479, 668, 2132, 2257, 2369
BaeGI	GKGCMC	4 cut(s)	512, 522, 1203, 1981
BanI	GGYRCC	1 cut(s)	517
BanII	GRGCYC	2 cut(s)	247, 1615
BbrPI	CACGTG	1 cut(s)	2012
BbsI	GAAGAC	2 cut(s)	1101, 2335
Bbv12I	GWGCWC	2 cut(s)	576, 1981
BbvI	GCAGC	9 cut(s)	360, 721, 963, 1317, 1471, 1493, 1674, 1689, 2211
BccI	CCATC	4 cut(s)	562, 791, 1372, 2276
BceAI	ACGGC	1 cut(s)	588
BciT130I	CCWGG	7 cut(s)	515, 884, 1034, 1561, 1719, 1823, 1887
BciVI	GTATCC	1 cut(s)	1542
BcoDI	GTCTC	3 cut(s)	694, 1804, 2302
BfaI	CTAG	4 cut(s)	14, 776, 1745, 2094
BfmI	CTRYAG	3 cut(s)	977, 993, 1303
BfrI	CTTAAG	1 cut(s)	1019
BfuAI	ACCTGC	1 cut(s)	986
BfuI	GTATCC	1 cut(s)	1542
BglI	GCCNNNNNGGC	1 cut(s)	39
BglII	AGATCT	3 cut(s)	532, 869, 1919
BisI	GCNGC	9 cut(s)	374, 735, 977, 1306, 1482, 1485, 1663, 1678, 2225
BlpI	GCTNAGC	1 cut(s)	54
BlsI	GCNGC	9 cut(s)	375, 736, 978, 1307, 1483, 1486, 1664, 1679, 2226
Bme1390I	CCNGG	7 cut(s)	515, 884, 1034, 1561, 1719, 1823, 1887
Bme18I	GGWCC	5 cut(s)	479, 668, 2132, 2257, 2369
BmeT110I	CYCGRG	1 cut(s)	488
BmgT120I	GGNCC	7 cut(s)	41, 479, 668, 1692, 2132, 2257, 2369
BmrFI	CCNGG	7 cut(s)	515, 884, 1034, 1561, 1719, 1823, 1887
BmrI	ACTGGG	2 cut(s)	38, 713
BmsI	GCATC	5 cut(s)	353, 877, 1481, 1496, 2353
BmtI	GCTAGC	1 cut(s)	1748
BmuI	ACTGGG	2 cut(s)	38, 713
BpiI	GAAGAC	2 cut(s)	1101, 2335
BpmI	CTGGAG	2 cut(s)	369, 1701
Bpu1102I	GCTNAGC	1 cut(s)	54
BpuEI	CTTGAG	1 cut(s)	982
Bsa29I	ATCGAT	1 cut(s)	417
BsaAI	YACGTR	2 cut(s)	2012, 2155
BsaJI	CCNNGG	7 cut(s)	248, 513, 1032, 1315, 1560, 1798, 2253
BsaXI	ACNNNNNCTCC	2 cut(s)	179, 209
Bsc4I	CCNNNNNNNGG	5 cut(s)	617, 979, 1803, 1804, 1822
Bse1I	ACTGG	9 cut(s)	44, 352, 431, 670, 708, 1057, 1435, 1848, 2134
Bse3DI	GCAATG	1 cut(s)	2178
BseBI	CCWGG	7 cut(s)	515, 884, 1034, 1561, 1719, 1823, 1887
BseCI	ATCGAT	1 cut(s)	417
BseDI	CCNNGG	7 cut(s)	248, 513, 1032, 1315, 1560, 1798, 2253
BseGI	GGATG	6 cut(s)	178, 892, 1203, 1472, 2059, 2368
BseLI	CCNNNNNNNGG	5 cut(s)	617, 979, 1803, 1804, 1822
BseMI	GCAATG	1 cut(s)	2178
BseMII	CTCAG	7 cut(s)	45, 395, 605, 687, 1776, 1848, 1937
BseNI	ACTGG	9 cut(s)	44, 352, 431, 670, 708, 1057, 1435, 1848, 2134
BseSI	GKGCMC	4 cut(s)	512, 522, 1203, 1981
BseXI	GCAGC	9 cut(s)	360, 721, 963, 1317, 1471, 1493, 1674, 1689, 2211
BseYI	CCCAGC	1 cut(s)	737
BsgI	GTGCAG	1 cut(s)	886
BshFI	GGCC	3 cut(s)	42, 1694, 1930
BshNI	GGYRCC	1 cut(s)	517
BshVI	ATCGAT	1 cut(s)	417
BsiHKAI	GWGCWC	2 cut(s)	576, 1981
BsiHKCI	CYCGRG	1 cut(s)	488
BslFI	GGGAC	4 cut(s)	32, 470, 1015, 2155
BslI	CCNNNNNNNGG	5 cut(s)	617, 979, 1803, 1804, 1822
BsmAI	GTCTC	3 cut(s)	694, 1804, 2302
BsmFI	GGGAC	4 cut(s)	32, 470, 1015, 2155
BsnI	GGCC	3 cut(s)	42, 1694, 1930
BsoBI	CYCGRG	1 cut(s)	488
Bsp1286I	GDGCHC	7 cut(s)	247, 512, 522, 576, 1203, 1615, 1981
Bsp1407I	TGTACA	1 cut(s)	498
Bsp143I	GATC	8 cut(s)	392, 414, 532, 755, 869, 1372, 1467, 1919
Bsp1720I	GCTNAGC	1 cut(s)	54
BspACI	CCGC	6 cut(s)	51, 336, 651, 1136, 1308, 1680
BspANI	GGCC	3 cut(s)	42, 1694, 1930
BspCNI	CTCAG	7 cut(s)	46, 396, 604, 688, 1777, 1849, 1936
BspDI	ATCGAT	1 cut(s)	417
BspHI	TCATGA	1 cut(s)	640
BspMAI	CTGCAG	3 cut(s)	981, 997, 1307
BspMI	ACCTGC	1 cut(s)	986
BspOI	GCTAGC	1 cut(s)	1748
BspPI	GGATC	2 cut(s)	400, 763
BspT107I	GGYRCC	1 cut(s)	517
BspTI	CTTAAG	1 cut(s)	1019
BsrDI	GCAATG	1 cut(s)	2178
BsrGI	TGTACA	1 cut(s)	498
BsrI	ACTGG	9 cut(s)	44, 352, 431, 670, 708, 1057, 1435, 1848, 2134
BssECI	CCNNGG	7 cut(s)	248, 513, 1032, 1315, 1560, 1798, 2253
BssMI	GATC	8 cut(s)	392, 414, 532, 755, 869, 1372, 1467, 1919
BssT1I	CCWWGG	4 cut(s)	248, 1315, 1798, 2253
Bst2UI	CCWGG	7 cut(s)	515, 884, 1034, 1561, 1719, 1823, 1887
BstAFI	CTTAAG	1 cut(s)	1019
BstAPI	GCANNNNNTGC	1 cut(s)	731
BstAUI	TGTACA	1 cut(s)	498
BstBAI	YACGTR	2 cut(s)	2012, 2155
BstC8I	GCNNGC	1 cut(s)	1746
BstEII	GGTNACC	1 cut(s)	1838
BstENI	CCTNNNNNAGG	1 cut(s)	615
BstF5I	GGATG	6 cut(s)	178, 892, 1203, 1472, 2059, 2368
BstKTI	GATC	8 cut(s)	395, 417, 535, 758, 872, 1375, 1470, 1922
BstMAI	GTCTC	3 cut(s)	694, 1804, 2302
BstMBI	GATC	8 cut(s)	392, 414, 532, 755, 869, 1372, 1467, 1919
BstMWI	GCNNNNNNNGC	7 cut(s)	39, 251, 731, 1478, 1490, 1712, 1853
BstNI	CCWGG	7 cut(s)	515, 884, 1034, 1561, 1719, 1823, 1887
BstNSI	RCATGY	1 cut(s)	2314
BstPI	GGTNACC	1 cut(s)	1838
BstSCI	CCNGG	7 cut(s)	513, 882, 1032, 1559, 1717, 1821, 1885
BstSFI	CTRYAG	3 cut(s)	977, 993, 1303
BstSLI	GKGCMC	4 cut(s)	512, 522, 1203, 1981
BstSNI	TACGTA	1 cut(s)	2155
BstV1I	GCAGC	9 cut(s)	360, 721, 963, 1317, 1471, 1493, 1674, 1689, 2211
BstV2I	GAAGAC	2 cut(s)	1101, 2335
BstX2I	RGATCY	3 cut(s)	532, 869, 1919
BstXI	CCANNNNNNTGG	1 cut(s)	282
BstYI	RGATCY	3 cut(s)	532, 869, 1919
Bsu15I	ATCGAT	1 cut(s)	417
BsuI	GTATCC	1 cut(s)	1542
BsuRI	GGCC	3 cut(s)	42, 1694, 1930
BsuTUI	ATCGAT	1 cut(s)	417
BtgZI	GCGATG	1 cut(s)	875
BtsCI	GGATG	6 cut(s)	178, 892, 1203, 1472, 2059, 2368
BtsIMutI	CAGTG	7 cut(s)	345, 466, 630, 663, 1050, 1725, 1855
BveI	ACCTGC	1 cut(s)	986
Cac8I	GCNNGC	1 cut(s)	1746
CciI	TCATGA	1 cut(s)	640
Cfr13I	GGNCC	7 cut(s)	41, 479, 668, 1692, 2132, 2257, 2369
ClaI	ATCGAT	1 cut(s)	417
CsiI	ACCWGGT	1 cut(s)	1821
Csp6I	GTAC	3 cut(s)	499, 2152, 2242
CspCI	CAANNNNNGTGG	4 cut(s)	268, 303, 442, 477
CviAII	CATG	9 cut(s)	438, 472, 641, 1338, 1781, 1844, 2183, 2276, 2311
CviQI	GTAC	3 cut(s)	499, 2152, 2242
DpnI	GATC	8 cut(s)	394, 416, 534, 757, 871, 1374, 1469, 1921
DpnII	GATC	8 cut(s)	392, 414, 532, 755, 869, 1372, 1467, 1919
DraIII	CACNNNGTG	1 cut(s)	2279
Eco105I	TACGTA	1 cut(s)	2155
Eco130I	CCWWGG	4 cut(s)	248, 1315, 1798, 2253
Eco147I	AGGCCT	1 cut(s)	1930
Eco24I	GRGCYC	2 cut(s)	247, 1615
Eco47I	GGWCC	5 cut(s)	479, 668, 2132, 2257, 2369
Eco57I	CTGAAG	4 cut(s)	906, 1194, 1353, 2094
Eco72I	CACGTG	1 cut(s)	2012
Eco88I	CYCGRG	1 cut(s)	488
Eco91I	GGTNACC	1 cut(s)	1838
EcoNI	CCTNNNNNAGG	1 cut(s)	615
EcoO109I	RGGNCCY	1 cut(s)	2369
EcoO65I	GGTNACC	1 cut(s)	1838
EcoRII	CCWGG	7 cut(s)	513, 882, 1032, 1559, 1717, 1821, 1885
EcoT14I	CCWWGG	4 cut(s)	248, 1315, 1798, 2253
EcoT22I	ATGCAT	1 cut(s)	727
EcoT38I	GRGCYC	2 cut(s)	247, 1615
ErhI	CCWWGG	4 cut(s)	248, 1315, 1798, 2253
FaeI	CATG	9 cut(s)	441, 475, 644, 1341, 1784, 1847, 2186, 2279, 2314
FalI	AAGNNNNNCTT	4 cut(s)	255, 287, 2327, 2359
FaqI	GGGAC	4 cut(s)	32, 470, 1015, 2155
FatI	CATG	9 cut(s)	437, 471, 640, 1337, 1780, 1843, 2182, 2275, 2310
FauI	CCCGC	1 cut(s)	58
Fnu4HI	GCNGC	9 cut(s)	374, 735, 977, 1306, 1482, 1485, 1663, 1678, 2225
FokI	GGATG	6 cut(s)	185, 899, 1190, 1459, 2066, 2375
FriOI	GRGCYC	2 cut(s)	247, 1615
Fsp4HI	GCNGC	9 cut(s)	374, 735, 977, 1306, 1482, 1485, 1663, 1678, 2225
FspBI	CTAG	4 cut(s)	14, 776, 1745, 2094
GluI	GCNGC	9 cut(s)	374, 735, 977, 1306, 1482, 1485, 1663, 1678, 2225
GsaI	CCCAGC	1 cut(s)	741
GsuI	CTGGAG	2 cut(s)	369, 1701
HaeIII	GGCC	3 cut(s)	42, 1694, 1930
Hin1II	CATG	9 cut(s)	441, 475, 644, 1341, 1784, 1847, 2186, 2279, 2314
HincII	GTYRAC	2 cut(s)	547, 1620
HindII	GTYRAC	2 cut(s)	547, 1620
HindIII	AAGCTT	2 cut(s)	269, 425
HinfI	GANTC	8 cut(s)	97, 543, 879, 941, 1412, 1556, 1591, 1722
HphI	GGTGA	3 cut(s)	1819, 1837, 2291
Hpy166II	GTNNAC	8 cut(s)	547, 1150, 1397, 1599, 1620, 1979, 2206, 2308
Hpy8I	GTNNAC	8 cut(s)	547, 1150, 1397, 1599, 1620, 1979, 2206, 2308
HpyAV	CCTTC	8 cut(s)	230, 257, 930, 1218, 1264, 1749, 2271, 2345
HpyCH4IV	ACGT	2 cut(s)	2011, 2154
HpyF10VI	GCNNNNNNNGC	7 cut(s)	39, 251, 731, 1478, 1490, 1712, 1853
HpySE526I	ACGT	2 cut(s)	2011, 2154
Hsp92II	CATG	9 cut(s)	441, 475, 644, 1341, 1784, 1847, 2186, 2279, 2314
Kzo9I	GATC	8 cut(s)	392, 414, 532, 755, 869, 1372, 1467, 1919
LmnI	GCTCC	5 cut(s)	200, 250, 1366, 1618, 1720
Lsp1109I	GCAGC	9 cut(s)	360, 721, 963, 1317, 1471, 1493, 1674, 1689, 2211
LweI	GCATC	5 cut(s)	353, 877, 1481, 1496, 2353
MabI	ACCWGGT	1 cut(s)	1821
MaeI	CTAG	4 cut(s)	14, 776, 1745, 2094
MaeII	ACGT	2 cut(s)	2011, 2154
MaeIII	GTNAC	7 cut(s)	343, 653, 785, 1825, 1838, 2039, 2210
MalI	GATC	8 cut(s)	394, 416, 534, 757, 871, 1374, 1469, 1921
MboI	GATC	8 cut(s)	392, 414, 532, 755, 869, 1372, 1467, 1919
MboII	GAAGA	4 cut(s)	424, 1101, 1359, 2335
MfeI	CAATTG	2 cut(s)	147, 280
MflI	RGATCY	3 cut(s)	532, 869, 1919
MhlI	GDGCHC	7 cut(s)	247, 512, 522, 576, 1203, 1615, 1981
MlyI	GAGTC	2 cut(s)	552, 1585
MmeI	TCCRAC	3 cut(s)	700, 1732, 2031
Mph1103I	ATGCAT	1 cut(s)	727
MroXI	GAANNNNTTC	2 cut(s)	329, 1325
MseI	TTAA	8 cut(s)	105, 914, 1020, 1656, 1791, 1832, 1935, 2380
MslI	CAYNNNNRTG	3 cut(s)	1848, 2025, 2280
MspA1I	CMGCKG	7 cut(s)	53, 336, 976, 1308, 1484, 1493, 1680
MspCI	CTTAAG	1 cut(s)	1019
MspR9I	CCNGG	7 cut(s)	515, 884, 1034, 1561, 1719, 1823, 1887
MunI	CAATTG	2 cut(s)	147, 280
MvaI	CCWGG	7 cut(s)	515, 884, 1034, 1561, 1719, 1823, 1887
MwoI	GCNNNNNNNGC	7 cut(s)	39, 251, 731, 1478, 1490, 1712, 1853
NdeII	GATC	8 cut(s)	392, 414, 532, 755, 869, 1372, 1467, 1919
NheI	GCTAGC	1 cut(s)	1744
NlaIII	CATG	9 cut(s)	441, 475, 644, 1341, 1784, 1847, 2186, 2279, 2314
NmuCI	GTSAC	3 cut(s)	343, 785, 1825
NsiI	ATGCAT	1 cut(s)	727
NspI	RCATGY	1 cut(s)	2314
PagI	TCATGA	1 cut(s)	640
PceI	AGGCCT	1 cut(s)	1930
PdmI	GAANNNNTTC	2 cut(s)	329, 1325
PfeI	GAWTC	6 cut(s)	97, 879, 941, 1412, 1556, 1722
PfoI	TCCNGGA	2 cut(s)	882, 1717
PkrI	GCNGC	9 cut(s)	375, 736, 978, 1307, 1483, 1486, 1664, 1679, 2226
PleI	GAGTC	2 cut(s)	551, 1585
PmaCI	CACGTG	1 cut(s)	2012
PmlI	CACGTG	1 cut(s)	2012
PpsI	GAGTC	2 cut(s)	551, 1585
Ppu21I	YACGTR	2 cut(s)	2012, 2155
PpuMI	RGGWCCY	1 cut(s)	2369
Psp5II	RGGWCCY	1 cut(s)	2369
Psp6I	CCWGG	7 cut(s)	513, 882, 1032, 1559, 1717, 1821, 1885
PspCI	CACGTG	1 cut(s)	2012
PspEI	GGTNACC	1 cut(s)	1838
PspFI	CCCAGC	1 cut(s)	737
PspGI	CCWGG	7 cut(s)	513, 882, 1032, 1559, 1717, 1821, 1885
PspPI	GGNCC	7 cut(s)	41, 479, 668, 1692, 2132, 2257, 2369
PspPPI	RGGWCCY	1 cut(s)	2369
PstI	CTGCAG	3 cut(s)	981, 997, 1307
PsuI	RGATCY	3 cut(s)	532, 869, 1919
PvuII	CAGCTG	3 cut(s)	976, 1484, 1493
RsaI	GTAC	3 cut(s)	500, 2153, 2243
RsaNI	GTAC	3 cut(s)	499, 2152, 2242
RseI	CAYNNNNRTG	3 cut(s)	1848, 2025, 2280
SaqAI	TTAA	8 cut(s)	105, 914, 1020, 1656, 1791, 1832, 1935, 2380
SatI	GCNGC	9 cut(s)	374, 735, 977, 1306, 1482, 1485, 1663, 1678, 2225
Sau3AI	GATC	8 cut(s)	392, 414, 532, 755, 869, 1372, 1467, 1919
Sau96I	GGNCC	7 cut(s)	41, 479, 668, 1692, 2132, 2257, 2369
SbfI	CCTGCAGG	1 cut(s)	997
SchI	GAGTC	2 cut(s)	552, 1585
ScrFI	CCNGG	7 cut(s)	515, 884, 1034, 1561, 1719, 1823, 1887
SdaI	CCTGCAGG	1 cut(s)	997
SduI	GDGCHC	7 cut(s)	247, 512, 522, 576, 1203, 1615, 1981
SexAI	ACCWGGT	1 cut(s)	1821
SfaNI	GCATC	5 cut(s)	353, 877, 1481, 1496, 2353
SfcI	CTRYAG	3 cut(s)	977, 993, 1303
SinI	GGWCC	5 cut(s)	479, 668, 2132, 2257, 2369
SmiMI	CAYNNNNRTG	3 cut(s)	1848, 2025, 2280
SmlI	CTYRAG	2 cut(s)	961, 1019
SmoI	CTYRAG	2 cut(s)	961, 1019
SnaBI	TACGTA	1 cut(s)	2155
Sse8387I	CCTGCAGG	1 cut(s)	997
SseBI	AGGCCT	1 cut(s)	1930
SsiI	CCGC	6 cut(s)	51, 336, 651, 1136, 1308, 1680
SspI	AATATT	1 cut(s)	1633
SspMI	CTAG	4 cut(s)	14, 776, 1745, 2094
StuI	AGGCCT	1 cut(s)	1930
StyD4I	CCNGG	7 cut(s)	513, 882, 1032, 1559, 1717, 1821, 1885
StyI	CCWWGG	4 cut(s)	248, 1315, 1798, 2253
TaiI	ACGT	2 cut(s)	2014, 2157
TaqI	TCGA	5 cut(s)	95, 417, 1092, 1179, 1464
TatI	WGTACW	1 cut(s)	498
TfiI	GAWTC	6 cut(s)	97, 879, 941, 1412, 1556, 1722
Tru1I	TTAA	8 cut(s)	105, 914, 1020, 1656, 1791, 1832, 1935, 2380
Tru9I	TTAA	8 cut(s)	105, 914, 1020, 1656, 1791, 1832, 1935, 2380
TscAI	CASTG	7 cut(s)	352, 466, 637, 670, 1057, 1732, 1855
TseFI	GTSAC	3 cut(s)	343, 785, 1825
TseI	GCWGC	9 cut(s)	373, 734, 976, 1305, 1481, 1484, 1662, 1677, 2224
Tsp45I	GTSAC	3 cut(s)	343, 785, 1825
TspDTI	ATGAA	7 cut(s)	460, 629, 1263, 1313, 1769, 2259, 2335
TspGWI	ACGGA	2 cut(s)	804, 1605
TspRI	CASTG	7 cut(s)	352, 466, 637, 670, 1057, 1732, 1855
Vha464I	CTTAAG	1 cut(s)	1019
VneI	GTGCAC	1 cut(s)	1977
VpaK11BI	GGWCC	5 cut(s)	479, 668, 2132, 2257, 2369
XagI	CCTNNNNNAGG	1 cut(s)	615
XapI	RAATTY	9 cut(s)	226, 385, 526, 840, 987, 1114, 1651, 1894, 1944
XbaI	TCTAGA	1 cut(s)	13
XceI	RCATGY	1 cut(s)	2314
XmnI	GAANNNNTTC	2 cut(s)	329, 1325
XspI	CTAG	4 cut(s)	14, 776, 1745, 2094
Zsp2I	ATGCAT	1 cut(s)	727

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.