FvH4_4g30250

Methyltransferase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Reverse (-)
29970123 .. 29974368
4246 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g30250.t1

Sequence Viewer

Length: 1476 bp
ATGAGAAGCTCCTGGTTGAGTAAACTGTCTCTCATTTTTGGCCCTAGACCGCCACTCAACTGGTTACTCTTGTGCCTTGTGAGTGTACTTGCACTAATTGCGGTGTTGGGATCATCATCTTCAAGCTCATTTGATTCTTTAACCCCCAGTTCAGTACCAGACATTTACACAAACTATAGGAGGCTAAAGGAGCAAGCGGCAGTTGATTACTTGGAGCTGAGGTCTCTCTCACTGGGGGGTAGTAAAGAAAAAGAGCTCGGCCTTTGTGGCAGAGATAAAGAACACTCTGTGCCTTGTTACAATGTTTCAGCAAATCTTTTAGCTGGGTATAAAGATGGGGAGGAGTTTGATCGGCATTGTGAAGTATCAAGAGACAGAGAACAGTGTCTAGTTCGTCCCCCTAAAGACTATAAGATCCCTCTGAGGTGGCCAGCTGGTAGGGATGTGATATGGAGTGGAAATGTGAAGATAACCAAAGACCAATTTCTGTCATCTGGAAGCATGACCAAAAGGTTGATGTTACTAGAAGAAAATCAAATTGCCTTTCACTCTGAGGATGGTTTGATTTTTGATGGTGTCAAGGATTATTCTCGTCAAATTGCGGAGATGCTGGGTTTGAGCAGTGACTCTGAATTTCCACAAGCTGGTGTTCACACAGTACTAGATATTGGTTGTGGTTTTGGTAGCTTTGGTGCTCATTTAGTATCCCTAAAGTTAATGGCTATTTGTATTGCGGCATATGAGGCAACTGGCAGTCAAGTTCAGTTGGCCCTTGAGAGAGGTCTTCCTGCAATGATTGGCAACTTCATCGCAAGACAACTTCCATATCCGTCACTGTCATTTGAAATGGTTCATTGTGCTCAATGTGGTATTCTTTGGGACAAAAAAGGAGTTCAGCCTGATGATTTCTTTGAAGACTTACAGGTTTGGAGATCAGCTTTAAAGAACTACTGGTCTTTGCTTACCCCCTTGATTTTCTCTGACCACCCCAAGAGACCAGGCGATGAAGACCCTTTACCTCCCTTCAACATGATACGCAATGTGCTCGACATGAGTGCTCATTACGGGGGTTTAAATGCTGCTTTTCTGGAGGAAAAGAAATCAGTCTGGGTGATGAATGTTGTGCCTGTTAATGCTCCCTATACTCTCCCTCTCATACTAGATCAAGGTTTTGCTGGTGTTTTGCATGACTGGTGCGAACCATTTCCCACATATCCTCGAACATATGATCTGCTGCATGCAAATGGGCTGCTCTCACTCCTGTCTTCAGAGAGATGCAGCATGATGGACTTATTCTTGGAGATGGACCGGATCCTGCGCCCTGAGGGCTGGGTTGTTCTCTCTGATAAAGTGGGACCTATAGAGATGGCACGCATGTTTGCTACCCAAGTACGTTGGGAAGCAAGGGTGATTGACCCTCAGAATGGCAGTGACCAGAGACTACTCGTATGCCAGAAACCATTTGTGAAAAAATGA

Protein Analysis

492

Amino Acids

55.11

Weight (kDa)

5.76

Isoelectric Point (pI)

41.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_29 PF03141 97 - 297 1.2e-46 Putative S-adenosyl-L-methionine-dependent methyltransferase
Methyltransf_29 PF03141 297 - 486 4.2e-51 Putative S-adenosyl-L-methionine-dependent methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 644
AciI CCGC 5 cut(s) 50, 101, 197, 602, 734
AclWI GGATC 4 cut(s) 118, 409, 1306, 1319
AcoI YGGCCR 1 cut(s) 428
AcsI RAATTY 1 cut(s) 632
AcuI CTGAAG 1 cut(s) 1251
AdeI CACNNNGTG 1 cut(s) 289
AfaI GTAC 4 cut(s) 87, 156, 660, 1392
AfiI CCNNNNNNNGG 2 cut(s) 644, 1424
AgsI TTSAA 4 cut(s) 123, 845, 914, 1027
AjnI CCWGG 2 cut(s) 11, 997
AluBI AGCT 9 cut(s) 9, 126, 217, 256, 323, 434, 644, 687, 938
AluI AGCT 9 cut(s) 9, 126, 217, 256, 323, 434, 644, 687, 938
Alw21I GWGCWC 5 cut(s) 258, 697, 862, 1047, 1060
Alw26I GTCTC 5 cut(s) 33, 228, 366, 988, 1432
AlwI GGATC 4 cut(s) 118, 409, 1306, 1319
AoxI GGCC 4 cut(s) 40, 259, 428, 768
ApeKI GCWGC 4 cut(s) 1079, 1234, 1249, 1278
ApoI RAATTY 1 cut(s) 632
Asp700I GAANNNNTTC 2 cut(s) 849, 1203
AspLEI GCGC 1 cut(s) 1320
AspS9I GGNCC 4 cut(s) 41, 769, 1306, 1355
AsuHPI GGTGA 2 cut(s) 1123, 1420
AvaII GGWCC 2 cut(s) 1306, 1355
AxyI CCTNAGG 1 cut(s) 1323
BalI TGGCCA 1 cut(s) 430
BamHI GGATCC 1 cut(s) 1311
BanII GRGCYC 1 cut(s) 258
BarI GAAGNNNNNNTAC 2 cut(s) 999, 1031
BbsI GAAGAC 4 cut(s) 776, 921, 1014, 1257
Bbv12I GWGCWC 5 cut(s) 258, 697, 862, 1047, 1060
BbvCI CCTCAGC 1 cut(s) 218
BbvI GCAGC 4 cut(s) 1066, 1221, 1236, 1290
BccI CCATC 6 cut(s) 329, 551, 566, 1279, 1297, 1360
BcgI CGANNNNNNTGC 6 cut(s) 790, 824, 1027, 1037, 1061, 1071
BciT130I CCWGG 2 cut(s) 13, 999
BciVI GTATCC 1 cut(s) 715
BcoDI GTCTC 5 cut(s) 33, 228, 366, 988, 1432
BfaI CTAG 5 cut(s) 45, 389, 524, 662, 1160
BfmI CTRYAG 2 cut(s) 175, 1359
BfuI GTATCC 1 cut(s) 715
BglI GCCNNNNNGGC 2 cut(s) 267, 1326
BisI GCNGC 6 cut(s) 198, 735, 1080, 1235, 1250, 1279
BlsI GCNGC 6 cut(s) 199, 736, 1081, 1236, 1251, 1280
BmcAI AGTACT 1 cut(s) 660
Bme1390I CCNGG 2 cut(s) 13, 999
Bme18I GGWCC 2 cut(s) 1306, 1355
BmgT120I GGNCC 4 cut(s) 41, 769, 1306, 1355
BmiI GGNNCC 2 cut(s) 1313, 1356
BmrFI CCNGG 2 cut(s) 13, 999
BmrI ACTGGG 2 cut(s) 141, 242
BmsI GCATC 2 cut(s) 597, 1265
BmuI ACTGGG 2 cut(s) 141, 242
BpiI GAAGAC 4 cut(s) 776, 921, 1014, 1257
BpmI CTGGAG 1 cut(s) 1109
Bpu10I CCTNAGC 1 cut(s) 218
BpuEI CTTGAG 1 cut(s) 794
BsaBI GATNNNNATC 1 cut(s) 115
BsaI GGTCTC 2 cut(s) 228, 988
BsaWI WCCGGW 1 cut(s) 1308
BsaXI ACNNNNNCTCC 2 cut(s) 206, 236
Bsc4I CCNNNNNNNGG 2 cut(s) 644, 1424
Bse1I ACTGG 6 cut(s) 65, 147, 237, 754, 956, 1196
Bse21I CCTNAGG 1 cut(s) 1323
Bse3DI GCAATG 2 cut(s) 798, 1045
Bse8I GATNNNNATC 1 cut(s) 115
BseBI CCWGG 2 cut(s) 13, 999
BseGI GGATG 2 cut(s) 448, 562
BseJI GATNNNNATC 1 cut(s) 115
BseLI CCNNNNNNNGG 2 cut(s) 644, 1424
BseMI GCAATG 2 cut(s) 798, 1045
BseMII CTCAG 5 cut(s) 209, 413, 543, 1314, 1433
BseNI ACTGG 6 cut(s) 65, 147, 237, 754, 956, 1196
BseRI GAGGAG 1 cut(s) 356
BseXI GCAGC 4 cut(s) 1066, 1221, 1236, 1290
BseYI CCCAGC 3 cut(s) 323, 610, 1329
BshFI GGCC 4 cut(s) 42, 261, 430, 770
BsiHKAI GWGCWC 5 cut(s) 258, 697, 862, 1047, 1060
BsiSI CCGG 1 cut(s) 1309
BslFI GGGAC 3 cut(s) 381, 893, 1368
BslI CCNNNNNNNGG 2 cut(s) 644, 1424
BsmAI GTCTC 5 cut(s) 33, 228, 366, 988, 1432
BsmFI GGGAC 3 cut(s) 381, 893, 1368
BsnI GGCC 4 cut(s) 42, 261, 430, 770
Bso31I GGTCTC 2 cut(s) 228, 988
Bsp1286I GDGCHC 5 cut(s) 258, 697, 862, 1047, 1060
Bsp143I GATC 7 cut(s) 110, 349, 414, 932, 1162, 1228, 1311
BspACI CCGC 5 cut(s) 50, 101, 197, 602, 734
BspANI GGCC 4 cut(s) 42, 261, 430, 770
BspCNI CTCAG 5 cut(s) 210, 414, 544, 1315, 1432
BspLI GGNNCC 2 cut(s) 1313, 1356
BspPI GGATC 4 cut(s) 118, 409, 1306, 1319
BspTNI GGTCTC 2 cut(s) 228, 988
BsrDI GCAATG 2 cut(s) 798, 1045
BsrI ACTGG 6 cut(s) 65, 147, 237, 754, 956, 1196
BssMI GATC 7 cut(s) 110, 349, 414, 932, 1162, 1228, 1311
Bst2UI CCWGG 2 cut(s) 13, 999
Bst4CI ACNGT 4 cut(s) 27, 384, 658, 837
BstAPI GCANNNNNTGC 1 cut(s) 98
BstC8I GCNNGC 4 cut(s) 195, 432, 1239, 1372
BstDEI CTNAG 5 cut(s) 218, 422, 552, 1323, 1419
BstF5I GGATG 2 cut(s) 448, 562
BstHHI GCGC 1 cut(s) 1320
BstKTI GATC 7 cut(s) 113, 352, 417, 935, 1165, 1231, 1314
BstMAI GTCTC 5 cut(s) 33, 228, 366, 988, 1432
BstMBI GATC 7 cut(s) 110, 349, 414, 932, 1162, 1228, 1311
BstMWI GCNNNNNNNGC 5 cut(s) 98, 190, 267, 743, 1326
BstNI CCWGG 2 cut(s) 13, 999
BstNSI RCATGY 2 cut(s) 1241, 1378
BstSCI CCNGG 2 cut(s) 11, 997
BstSFI CTRYAG 2 cut(s) 175, 1359
BstV1I GCAGC 4 cut(s) 1066, 1221, 1236, 1290
BstV2I GAAGAC 4 cut(s) 776, 921, 1014, 1257
BstX2I RGATCY 2 cut(s) 414, 1311
BstXI CCANNNNNNTGG 1 cut(s) 60
BstYI RGATCY 2 cut(s) 414, 1311
Bsu36I CCTNAGG 1 cut(s) 1323
BsuI GTATCC 1 cut(s) 715
BsuRI GGCC 4 cut(s) 42, 261, 430, 770
BtgZI GCGATG 2 cut(s) 793, 1017
BtsCI GGATG 2 cut(s) 448, 562
BtsI GCAGTG 2 cut(s) 628, 1435
BtsIMutI CAGTG 5 cut(s) 230, 389, 628, 833, 1435
Cac8I GCNNGC 4 cut(s) 195, 432, 1239, 1372
CfoI GCGC 1 cut(s) 1320
Cfr13I GGNCC 4 cut(s) 41, 769, 1306, 1355
Csp6I GTAC 4 cut(s) 86, 155, 659, 1391
CviAII CATG 7 cut(s) 502, 1030, 1051, 1187, 1238, 1282, 1375
CviQI GTAC 4 cut(s) 86, 155, 659, 1391
DdeI CTNAG 5 cut(s) 218, 422, 552, 1323, 1419
DpnI GATC 7 cut(s) 112, 351, 416, 934, 1164, 1230, 1313
DpnII GATC 7 cut(s) 110, 349, 414, 932, 1162, 1228, 1311
DraI TTTAAA 2 cut(s) 942, 1074
DraIII CACNNNGTG 1 cut(s) 289
EaeI YGGCCR 1 cut(s) 428
Ecl136II GAGCTC 1 cut(s) 256
Eco24I GRGCYC 1 cut(s) 258
Eco31I GGTCTC 2 cut(s) 228, 988
Eco47I GGWCC 2 cut(s) 1306, 1355
Eco53kI GAGCTC 1 cut(s) 256
Eco57I CTGAAG 1 cut(s) 1251
Eco81I CCTNAGG 1 cut(s) 1323
EcoICRI GAGCTC 1 cut(s) 256
EcoO109I RGGNCCY 1 cut(s) 1355
EcoRII CCWGG 2 cut(s) 11, 997
EcoT38I GRGCYC 1 cut(s) 258
FaeI CATG 7 cut(s) 505, 1033, 1054, 1190, 1241, 1285, 1378
FaqI GGGAC 3 cut(s) 381, 893, 1368
FatI CATG 7 cut(s) 501, 1029, 1050, 1186, 1237, 1281, 1374
FauNDI CATATG 2 cut(s) 739, 1225
Fnu4HI GCNGC 6 cut(s) 198, 735, 1080, 1235, 1250, 1279
FokI GGATG 2 cut(s) 455, 569
FriOI GRGCYC 1 cut(s) 258
Fsp4HI GCNGC 6 cut(s) 198, 735, 1080, 1235, 1250, 1279
FspBI CTAG 5 cut(s) 45, 389, 524, 662, 1160
GlaI GCGC 1 cut(s) 1319
GluI GCNGC 6 cut(s) 198, 735, 1080, 1235, 1250, 1279
GsaI CCCAGC 3 cut(s) 327, 614, 1333
GsuI CTGGAG 1 cut(s) 1109
HaeIII GGCC 4 cut(s) 42, 261, 430, 770
HapII CCGG 1 cut(s) 1309
HhaI GCGC 1 cut(s) 1320
Hin1II CATG 7 cut(s) 505, 1033, 1054, 1190, 1241, 1285, 1378
Hin6I GCGC 1 cut(s) 1318
HinP1I GCGC 1 cut(s) 1318
HinfI GANTC 2 cut(s) 134, 626
HpaII CCGG 1 cut(s) 1309
HphI GGTGA 2 cut(s) 1123, 1420
Hpy166II GTNNAC 3 cut(s) 23, 86, 652
Hpy188I TCNGA 7 cut(s) 423, 553, 631, 982, 1270, 1345, 1422
Hpy188III TCNNGA 3 cut(s) 369, 495, 1088
Hpy8I GTNNAC 3 cut(s) 23, 86, 652
HpyAV CCTTC 1 cut(s) 1033
HpyCH4III ACNGT 4 cut(s) 27, 384, 658, 837
HpyCH4IV ACGT 1 cut(s) 1393
HpyCH4V TGCA 6 cut(s) 92, 791, 1186, 1237, 1241, 1278
HpyF10VI GCNNNNNNNGC 5 cut(s) 98, 190, 267, 743, 1326
HpyF3I CTNAG 5 cut(s) 218, 422, 552, 1323, 1419
HpySE526I ACGT 1 cut(s) 1393
Hsp92II CATG 7 cut(s) 505, 1033, 1054, 1190, 1241, 1285, 1378
HspAI GCGC 1 cut(s) 1318
Kzo9I GATC 7 cut(s) 110, 349, 414, 932, 1162, 1228, 1311
LmnI GCTCC 4 cut(s) 14, 190, 214, 1141
Lsp1109I GCAGC 4 cut(s) 1066, 1221, 1236, 1290
LweI GCATC 2 cut(s) 597, 1265
MaeI CTAG 5 cut(s) 45, 389, 524, 662, 1160
MaeII ACGT 1 cut(s) 1393
MaeIII GTNAC 6 cut(s) 63, 296, 519, 623, 831, 1430
MalI GATC 7 cut(s) 112, 351, 416, 934, 1164, 1230, 1313
MboI GATC 7 cut(s) 110, 349, 414, 932, 1162, 1228, 1311
MboII GAAGA 7 cut(s) 111, 478, 539, 776, 926, 1019, 1257
MflI RGATCY 2 cut(s) 414, 1311
MhlI GDGCHC 5 cut(s) 258, 697, 862, 1047, 1060
MlsI TGGCCA 1 cut(s) 430
MluCI AATT 5 cut(s) 96, 482, 537, 597, 632
MluNI TGGCCA 1 cut(s) 430
MlyI GAGTC 1 cut(s) 620
Mox20I TGGCCA 1 cut(s) 430
MroXI GAANNNNTTC 2 cut(s) 849, 1203
MscI TGGCCA 1 cut(s) 430
MseI TTAA 5 cut(s) 140, 716, 941, 1073, 1131
MslI CAYNNNNRTG 1 cut(s) 1242
Msp20I TGGCCA 1 cut(s) 430
MspA1I CMGCKG 1 cut(s) 434
MspI CCGG 1 cut(s) 1309
MspR9I CCNGG 2 cut(s) 13, 999
MvaI CCWGG 2 cut(s) 13, 999
MwoI GCNNNNNNNGC 5 cut(s) 98, 190, 267, 743, 1326
NdeI CATATG 2 cut(s) 739, 1225
NdeII GATC 7 cut(s) 110, 349, 414, 932, 1162, 1228, 1311
NlaIII CATG 7 cut(s) 505, 1033, 1054, 1190, 1241, 1285, 1378
NlaIV GGNNCC 2 cut(s) 1313, 1356
NmeAIII GCCGAG 1 cut(s) 237
NmuCI GTSAC 3 cut(s) 623, 831, 1430
NspI RCATGY 2 cut(s) 1241, 1378
PaeI GCATGC 1 cut(s) 1241
PdmI GAANNNNTTC 2 cut(s) 849, 1203
PfeI GAWTC 1 cut(s) 134
PflMI CCANNNNNTGG 1 cut(s) 644
PkrI GCNGC 6 cut(s) 199, 736, 1081, 1236, 1251, 1280
PleI GAGTC 1 cut(s) 620
PpsI GAGTC 1 cut(s) 620
PpuMI RGGWCCY 1 cut(s) 1355
Psp124BI GAGCTC 1 cut(s) 258
Psp5II RGGWCCY 1 cut(s) 1355
Psp6I CCWGG 2 cut(s) 11, 997
PspFI CCCAGC 3 cut(s) 323, 610, 1329
PspGI CCWGG 2 cut(s) 11, 997
PspN4I GGNNCC 2 cut(s) 1313, 1356
PspPI GGNCC 4 cut(s) 41, 769, 1306, 1355
PspPPI RGGWCCY 1 cut(s) 1355
PsuI RGATCY 2 cut(s) 414, 1311
PvuII CAGCTG 1 cut(s) 434
RsaI GTAC 4 cut(s) 87, 156, 660, 1392
RsaNI GTAC 4 cut(s) 86, 155, 659, 1391
RseI CAYNNNNRTG 1 cut(s) 1242
SacI GAGCTC 1 cut(s) 258
SaqAI TTAA 5 cut(s) 140, 716, 941, 1073, 1131
SatI GCNGC 6 cut(s) 198, 735, 1080, 1235, 1250, 1279
Sau3AI GATC 7 cut(s) 110, 349, 414, 932, 1162, 1228, 1311
Sau96I GGNCC 4 cut(s) 41, 769, 1306, 1355
ScaI AGTACT 1 cut(s) 660
SchI GAGTC 1 cut(s) 620
ScrFI CCNGG 2 cut(s) 13, 999
SduI GDGCHC 5 cut(s) 258, 697, 862, 1047, 1060
SfaNI GCATC 2 cut(s) 597, 1265
SfcI CTRYAG 2 cut(s) 175, 1359
SinI GGWCC 2 cut(s) 1306, 1355
SmiMI CAYNNNNRTG 1 cut(s) 1242
SmlI CTYRAG 1 cut(s) 773
SmoI CTYRAG 1 cut(s) 773
SphI GCATGC 1 cut(s) 1241
Sse9I AATT 5 cut(s) 96, 482, 537, 597, 632
SsiI CCGC 5 cut(s) 50, 101, 197, 602, 734
SspMI CTAG 5 cut(s) 45, 389, 524, 662, 1160
SstI GAGCTC 1 cut(s) 258
StyD4I CCNGG 2 cut(s) 11, 997
TaaI ACNGT 4 cut(s) 27, 384, 658, 837
TaiI ACGT 1 cut(s) 1396
TaqI TCGA 2 cut(s) 1047, 1219
TasI AATT 5 cut(s) 96, 482, 537, 597, 632
TatI WGTACW 2 cut(s) 85, 658
TauI GCSGC 2 cut(s) 200, 737
TfiI GAWTC 1 cut(s) 134
Tru1I TTAA 5 cut(s) 140, 716, 941, 1073, 1131
Tru9I TTAA 5 cut(s) 140, 716, 941, 1073, 1131
TscAI CASTG 5 cut(s) 237, 389, 628, 840, 1435
TseFI GTSAC 3 cut(s) 623, 831, 1430
TseI GCWGC 4 cut(s) 1079, 1234, 1249, 1278
Tsp45I GTSAC 3 cut(s) 623, 831, 1430
TspDTI ATGAA 4 cut(s) 796, 842, 1020, 1130
TspGWI ACGGA 1 cut(s) 819
TspRI CASTG 5 cut(s) 237, 389, 628, 840, 1435
Van91I CCANNNNNTGG 1 cut(s) 644
VpaK11BI GGWCC 2 cut(s) 1306, 1355
XapI RAATTY 1 cut(s) 632
XceI RCATGY 2 cut(s) 1241, 1378
XmnI GAANNNNTTC 2 cut(s) 849, 1203
XspI CTAG 5 cut(s) 45, 389, 524, 662, 1160
ZrmI AGTACT 1 cut(s) 660
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.