Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0004356

Physical Location & Seq

Genomic Coordinates Reverse (-)

4441418 .. 4445984

Gene Structure 4567 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1062400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1869 bp

ATGAGAAGCTCCTGGTTCAGTAAACTCTCCCTCATTTTTGGCCCTAGACCGCTGCTCAGTTGGTTACTCTTGTGTGTTGTTAGTGTACTCGCACTAATTGCAGTGCTGGGATCATCTTCTTCTCATACATTTGACTCTTTAACTACCACTTCAGTACCCGACATATATACAAACTATAGGAGGCTAAAGGAGCAAGCGGCGGTTGATTATCTGGAGCTGAGGTCTCTTTCATTGGGGGCTAGTCGACAAAGAGAGCTTGGTCTTTGTAGCAAAGAAAGAGAAAATCACGTGCCTTGTTACAATGTTTCAGCAAACCTTTTAGCTGGGTTTAAAGATGGGGAGGAGTTTGATCGGCATTGTGAAGTATCAAGAAACAGAGAACGGTGTCTAGTTCGCCCTCCTAAGGATTATAAGATCCCCCTTAGGTGGCCAGCTGGTAGGGATGTGATATGGAGTGGAAATGTGAAGATAACCAAAGACCAATTTCTTTCGTCTGGAAGCATGACCAAAAGGTTGATGCTACTAGAAGAAAATCAAATTGCCTTTCACTCTGACGATGGTCTGATTTTTGATGGTGTCAAGGATTATTCTCTTCAAATTGCAAAGATGATAGGTTTAAAAAGTGACTCTGACTTTCTTCAAGCCGGTGTGCAAACTGTACTGGATATTGGTTGTGGTTTTGGTAGTTTCGGAGCTCATTTAGTATCACTGAATGTAATGGCTATTTGTATTGCGGCCTATGAGGCAACTGGCAGTCAAGTTCAGTTGACCCTTGAGAGAGGTCTTCCAGCAATGATTGGAAACTTCATTACAAGACAGCTTCCTTACCCAGCATTGTCATTTGAAATGGTTCATTGTGCTCAGTGCGGTATTGTTTGGGACAAAAAAGATTCGATGTTGCTTTTAGAAGTTGACCGGGTACTCAAGCCCGGAGGCTACTTTGTTGTAACCTCATTGACAAGCCAACCATATGGAAGTTCATTGAGCATGAAGAATAGCATGTTCACAACAATGGAGGAATTGACCCCGAAAGTCTGTTGGACTCTAAAAGCTCAGCAATATGAAACTTTTATCTGGCAGAAAACTGTGGATTCTGATTGCTATGCATCTCGTAAGCAGGGTGCTCTACCAGTTTGTAATGAAGGGCATGACGTTCGATCATATTATAAGCCTCTCGTATCATGTATAAGTGGGACCACCAGCAAACGCTGGGCTCCAATTCGAAATAGGTCCTCTAGTCCCCATCGATTGAGCTCGGCTGAGCTTGAAGTTCATGGAAAGTTTTTTCAGCCTGAAGATTTCTTTGAAGACTTACGGGTTTGGAGATCAGCTCTGAAAAACTATTGGTCTTTGCTTACACCCTTGATTTTCTCTGACCACCCAAAGAGACCAGGCGATGAAGACCCATTACCTCCATTCAACATGCTACGCAATGTGATGGACATGAGTGCTCATTATGGGGGTTTAAATGCTGCTTTTCTGGAGGAAAGAAAATCAGTGTGGGTGATGAATGTCGTGCCTGTCAATGCTCCCTACACACTTCCTCTCATTCTAGATCAAGGTTTTGCTGGTGTTTTGCATGACTGGTGTGAACCATTCCCGACATATCCTCGAACATATGATTTGCTGCATGCAGATGGGCTGCTCTCACATCTCTCTTCAGAGAGGTGCGGCATGATGGACTTATTCTTGGAGATGGACCGGATTCTGCGACCTGAGGGATGGGTTGTTCTCTGTGATAAAAAGGGAGCTATAGAGATGGCGCGCATGTTTGCTACACAAATACGTTGGGAAGCAAGGGTGATTGACCTTGAGAATGGGAGTGATCAACGACTACTTGTTTGCCAAAAACCGTTCGTAAAAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0008150 GO:0008152 GO:0008168 GO:0008757 GO:0012505 GO:0016020 GO:0016740 GO:0016741 GO:0031090 GO:0032259 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_29

Protein Analysis

623

Amino Acids

70.35

Weight (kDa)

7.18

Isoelectric Point (pI)

40.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_29	PF03141	95 - 617	2.6e-133	Putative S-adenosyl-L-methionine-dependent methyltransferase
Methyltransf_25	PF13649	220 - 312	8.6e-07	Methyltransferase domain
Methyltransf_11	PF08241	221 - 316	5e-07	Methyltransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004356)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13860 AT1G13860 AT1G13860 AT1G13860 AT1G13860 AT2G03480 AT2G03480 AT2G03480
fragaria_vesca	FvH4_4g30250 FvH4_5g37070 FvH4_5g37070
malus_domestica	MD13G1063700.v1.1 MD16G1062200.v1.1 MD16G1062400.v1.1
prunus_persica	Prupe.1G284100_v2.0.a1 Prupe.1G285100_v2.0.a1
pyrus_communis	pycom13g05630 pycom16g05450
rosa_chinensis	RchiOBHm_Chr4g0438551 RchiOBHm_Chr7g0238621
rosa_laevigata	RLG00000006352
rosa_multiflora	Rmu_sc0002327.1_g000004 Rmu_sc0003812.1_g000002
rosa_roxburghii	Rroxscaffold_5G00379560
rosa_rugosa	Rorug04G0311400
rosa_samantha	Rh4AG361800 Rh4BG373200 Rh4CG387100 Rh4DG367800 Rh4DG367900
rosa_wichuraiana	Rw0G006650 Rw0G016600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	411, 1167
AccI	GTMKAC	1 cut(s)	244
AccII	CGCG	1 cut(s)	1765
AciI	CCGC	6 cut(s)	50, 197, 200, 734, 867, 1671
AclWI	GGATC	2 cut(s)	118, 409
AcoI	YGGCCR	1 cut(s)	428
AcuI	CTGAAG	3 cut(s)	135, 1314, 1644
AcvI	CACGTG	1 cut(s)	289
AfaI	GTAC	4 cut(s)	87, 156, 660, 921
AfiI	CCNNNNNNNGG	2 cut(s)	403, 426
AgsI	TTSAA	6 cut(s)	596, 641, 845, 1268, 1307, 1420
AjnI	CCWGG	2 cut(s)	11, 1390
AloI	GAACNNNNNNTCC	2 cut(s)	1713, 1745
Alw21I	GWGCWC	5 cut(s)	697, 862, 1126, 1256, 1453
Alw26I	GTCTC	2 cut(s)	228, 1381
AlwI	GGATC	2 cut(s)	118, 409
AoxI	GGCC	3 cut(s)	40, 428, 735
ApeKI	GCWGC	4 cut(s)	52, 1472, 1627, 1642
ArsI	GACNNNNNNTTYG	2 cut(s)	1824, 1856
Asp700I	GAANNNNTTC	1 cut(s)	849
AspLEI	GCGC	2 cut(s)	1765, 1767
AspS9I	GGNCC	4 cut(s)	41, 1194, 1230, 1699
AsuC2I	CCSGG	2 cut(s)	917, 930
AsuHPI	GGTGA	2 cut(s)	1516, 1813
AsuII	TTCGAA	1 cut(s)	1222
AvaII	GGWCC	3 cut(s)	1194, 1230, 1699
AxyI	CCTNAGG	3 cut(s)	402, 422, 1716
BaeI	ACNNNNGTAYC	2 cut(s)	138, 171
BalI	TGGCCA	1 cut(s)	430
BanII	GRGCYC	3 cut(s)	697, 1216, 1256
BarI	GAAGNNNNNNTAC	2 cut(s)	1392, 1424
BbrPI	CACGTG	1 cut(s)	289
BbsI	GAAGAC	3 cut(s)	776, 1314, 1407
Bbv12I	GWGCWC	5 cut(s)	697, 862, 1126, 1256, 1453
BbvCI	CCTCAGC	1 cut(s)	218
BbvI	GCAGC	4 cut(s)	39, 1459, 1614, 1629
BcgI	CGANNNNNNTGC	2 cut(s)	1136, 1170
BciT130I	CCWGG	2 cut(s)	13, 1392
BclI	TGATCA	1 cut(s)	1825
BcnI	CCSGG	2 cut(s)	917, 930
BcoDI	GTCTC	2 cut(s)	228, 1381
BfaI	CTAG	6 cut(s)	45, 240, 389, 524, 1236, 1553
BfmI	CTRYAG	2 cut(s)	175, 1752
BglI	GCCNNNNNGGC	1 cut(s)	743
BisI	GCNGC	7 cut(s)	53, 198, 735, 1473, 1628, 1643, 1672
BlpI	GCTNAGC	2 cut(s)	1053, 1260
BlsI	GCNGC	7 cut(s)	54, 199, 736, 1474, 1629, 1644, 1673
Bme1390I	CCNGG	4 cut(s)	13, 917, 930, 1392
Bme18I	GGWCC	3 cut(s)	1194, 1230, 1699
BmgT120I	GGNCC	4 cut(s)	41, 1194, 1230, 1699
BmiI	GGNNCC	2 cut(s)	1195, 1215
BmrFI	CCNGG	4 cut(s)	13, 917, 930, 1392
BmsI	GCATC	2 cut(s)	507, 1115
BoxI	GACNNNNGTC	1 cut(s)	558
BpiI	GAAGAC	3 cut(s)	776, 1314, 1407
BplI	GAGNNNNNCTC	2 cut(s)	1315, 1347
BpmI	CTGGAG	2 cut(s)	233, 1502
Bpu10I	CCTNAGC	1 cut(s)	218
Bpu1102I	GCTNAGC	2 cut(s)	1053, 1260
Bpu14I	TTCGAA	1 cut(s)	1222
BpuEI	CTTGAG	3 cut(s)	794, 908, 1832
BpuMI	CCSGG	2 cut(s)	917, 930
Bsa29I	ATCGAT	1 cut(s)	1246
BsaAI	YACGTR	1 cut(s)	289
BsaI	GGTCTC	2 cut(s)	228, 1381
BsaWI	WCCGGW	1 cut(s)	1701
BsaXI	ACNNNNNCTCC	2 cut(s)	206, 236
Bsc4I	CCNNNNNNNGG	2 cut(s)	403, 426
Bse118I	RCCGGY	1 cut(s)	644
Bse1I	ACTGG	4 cut(s)	666, 754, 1130, 1589
Bse21I	CCTNAGG	3 cut(s)	402, 422, 1716
Bse3DI	GCAATG	2 cut(s)	798, 1438
BseBI	CCWGG	2 cut(s)	13, 1392
BseCI	ATCGAT	1 cut(s)	1246
BseGI	GGATG	2 cut(s)	448, 1727
BseLI	CCNNNNNNNGG	2 cut(s)	403, 426
BseMI	GCAATG	2 cut(s)	798, 1438
BseMII	CTCAG	6 cut(s)	70, 209, 875, 1067, 1251, 1707
BseNI	ACTGG	4 cut(s)	666, 754, 1130, 1589
BsePI	GCGCGC	1 cut(s)	1763
BseRI	GAGGAG	1 cut(s)	356
BseXI	GCAGC	4 cut(s)	39, 1459, 1614, 1629
BseYI	CCCAGC	4 cut(s)	106, 323, 829, 1209
Bsh1236I	CGCG	1 cut(s)	1765
BshFI	GGCC	3 cut(s)	42, 430, 737
BshVI	ATCGAT	1 cut(s)	1246
BsiHKAI	GWGCWC	5 cut(s)	697, 862, 1126, 1256, 1453
BsiSI	CCGG	4 cut(s)	645, 916, 930, 1702
BslFI	GGGAC	3 cut(s)	893, 1207, 1224
BslI	CCNNNNNNNGG	2 cut(s)	403, 426
BsmAI	GTCTC	2 cut(s)	228, 1381
BsmFI	GGGAC	3 cut(s)	893, 1207, 1224
BsnI	GGCC	3 cut(s)	42, 430, 737
Bso31I	GGTCTC	2 cut(s)	228, 1381
Bsp119I	TTCGAA	1 cut(s)	1222
Bsp1286I	GDGCHC	6 cut(s)	697, 862, 1126, 1216, 1256, 1453
Bsp143I	GATC	7 cut(s)	110, 349, 414, 1157, 1325, 1555, 1825
Bsp1720I	GCTNAGC	2 cut(s)	1053, 1260
BspACI	CCGC	6 cut(s)	50, 197, 200, 734, 867, 1671
BspANI	GGCC	3 cut(s)	42, 430, 737
BspCNI	CTCAG	6 cut(s)	69, 210, 874, 1066, 1252, 1708
BspDI	ATCGAT	1 cut(s)	1246
BspFNI	CGCG	1 cut(s)	1765
BspLI	GGNNCC	2 cut(s)	1195, 1215
BspPI	GGATC	2 cut(s)	118, 409
BspT104I	TTCGAA	1 cut(s)	1222
BspTNI	GGTCTC	2 cut(s)	228, 1381
BsrDI	GCAATG	2 cut(s)	798, 1438
BsrFI	RCCGGY	1 cut(s)	644
BsrI	ACTGG	4 cut(s)	666, 754, 1130, 1589
BssAI	RCCGGY	1 cut(s)	644
BssHII	GCGCGC	1 cut(s)	1763
BssMI	GATC	7 cut(s)	110, 349, 414, 1157, 1325, 1555, 1825
Bst2UI	CCWGG	2 cut(s)	13, 1392
Bst4CI	ACNGT	4 cut(s)	384, 658, 1087, 1854
Bst6I	CTCTTC	2 cut(s)	597, 1663
BstAPI	GCANNNNNTGC	1 cut(s)	98
BstBAI	YACGTR	1 cut(s)	289
BstBI	TTCGAA	1 cut(s)	1222
BstC8I	GCNNGC	4 cut(s)	195, 432, 1632, 1765
BstDEI	CTNAG	8 cut(s)	56, 218, 402, 422, 861, 1053, 1260, 1716
BstF5I	GGATG	2 cut(s)	448, 1727
BstFNI	CGCG	1 cut(s)	1765
BstHHI	GCGC	2 cut(s)	1765, 1767
BstKTI	GATC	7 cut(s)	113, 352, 417, 1160, 1328, 1558, 1828
BstMAI	GTCTC	2 cut(s)	228, 1381
BstMBI	GATC	7 cut(s)	110, 349, 414, 1157, 1325, 1555, 1825
BstMWI	GCNNNNNNNGC	3 cut(s)	98, 190, 743
BstNI	CCWGG	2 cut(s)	13, 1392
BstNSI	RCATGY	4 cut(s)	1003, 1426, 1634, 1771
BstPAI	GACNNNNGTC	1 cut(s)	558
BstSCI	CCNGG	4 cut(s)	11, 915, 928, 1390
BstSFI	CTRYAG	2 cut(s)	175, 1752
BstUI	CGCG	1 cut(s)	1765
BstV1I	GCAGC	4 cut(s)	39, 1459, 1614, 1629
BstV2I	GAAGAC	3 cut(s)	776, 1314, 1407
BstX2I	RGATCY	1 cut(s)	414
BstXI	CCANNNNNNTGG	1 cut(s)	971
BstYI	RGATCY	1 cut(s)	414
Bsu15I	ATCGAT	1 cut(s)	1246
Bsu36I	CCTNAGG	3 cut(s)	402, 422, 1716
BsuRI	GGCC	3 cut(s)	42, 430, 737
BsuTUI	ATCGAT	1 cut(s)	1246
BtgZI	GCGATG	1 cut(s)	1410
BtsCI	GGATG	2 cut(s)	448, 1727
BtsI	GCAGTG	1 cut(s)	108
BtsIMutI	CAGTG	4 cut(s)	108, 707, 869, 1503
Cac8I	GCNNGC	4 cut(s)	195, 432, 1632, 1765
CfoI	GCGC	2 cut(s)	1765, 1767
Cfr10I	RCCGGY	1 cut(s)	644
Cfr13I	GGNCC	4 cut(s)	41, 1194, 1230, 1699
ClaI	ATCGAT	1 cut(s)	1246
Csp6I	GTAC	4 cut(s)	86, 155, 659, 920
CviQI	GTAC	4 cut(s)	86, 155, 659, 920
DdeI	CTNAG	8 cut(s)	56, 218, 402, 422, 861, 1053, 1260, 1716
DpnI	GATC	7 cut(s)	112, 351, 416, 1159, 1327, 1557, 1827
DpnII	GATC	7 cut(s)	110, 349, 414, 1157, 1325, 1555, 1825
DraI	TTTAAA	3 cut(s)	331, 618, 1467
EaeI	YGGCCR	1 cut(s)	428
Eam1104I	CTCTTC	2 cut(s)	597, 1663
EarI	CTCTTC	2 cut(s)	597, 1663
Ecl136II	GAGCTC	2 cut(s)	695, 1254
Eco24I	GRGCYC	3 cut(s)	697, 1216, 1256
Eco31I	GGTCTC	2 cut(s)	228, 1381
Eco47I	GGWCC	3 cut(s)	1194, 1230, 1699
Eco53kI	GAGCTC	2 cut(s)	695, 1254
Eco57I	CTGAAG	3 cut(s)	135, 1314, 1644
Eco72I	CACGTG	1 cut(s)	289
Eco81I	CCTNAGG	3 cut(s)	402, 422, 1716
EcoICRI	GAGCTC	2 cut(s)	695, 1254
EcoO109I	RGGNCCY	1 cut(s)	1230
EcoRII	CCWGG	2 cut(s)	11, 1390
EcoT22I	ATGCAT	1 cut(s)	1108
EcoT38I	GRGCYC	3 cut(s)	697, 1216, 1256
FaqI	GGGAC	3 cut(s)	893, 1207, 1224
FauNDI	CATATG	2 cut(s)	970, 1618
FbaI	TGATCA	1 cut(s)	1825
FblI	GTMKAC	1 cut(s)	244
Fnu4HI	GCNGC	7 cut(s)	53, 198, 735, 1473, 1628, 1643, 1672
FokI	GGATG	2 cut(s)	455, 1734
FriOI	GRGCYC	3 cut(s)	697, 1216, 1256
Fsp4HI	GCNGC	7 cut(s)	53, 198, 735, 1473, 1628, 1643, 1672
FspBI	CTAG	6 cut(s)	45, 240, 389, 524, 1236, 1553
GlaI	GCGC	2 cut(s)	1764, 1766
GluI	GCNGC	7 cut(s)	53, 198, 735, 1473, 1628, 1643, 1672
GsaI	CCCAGC	4 cut(s)	110, 327, 833, 1213
GsuI	CTGGAG	2 cut(s)	233, 1502
HaeIII	GGCC	3 cut(s)	42, 430, 737
HapII	CCGG	4 cut(s)	645, 916, 930, 1702
HhaI	GCGC	2 cut(s)	1765, 1767
Hin6I	GCGC	2 cut(s)	1763, 1765
HinP1I	GCGC	2 cut(s)	1763, 1765
HincII	GTYRAC	3 cut(s)	245, 768, 913
HindII	GTYRAC	3 cut(s)	245, 768, 913
HinfI	GANTC	6 cut(s)	134, 626, 890, 1042, 1091, 1705
HpaII	CCGG	4 cut(s)	645, 916, 930, 1702
HphI	GGTGA	2 cut(s)	1516, 1813
Hpy166II	GTNNAC	7 cut(s)	23, 86, 245, 768, 913, 1005, 1592
Hpy188I	TCNGA	8 cut(s)	553, 564, 631, 692, 1096, 1335, 1375, 1663
Hpy188III	TCNNGA	6 cut(s)	212, 369, 495, 1481, 1553, 1600
Hpy8I	GTNNAC	7 cut(s)	23, 86, 245, 768, 913, 1005, 1592
HpyAV	CCTTC	1 cut(s)	1136
HpyCH4III	ACNGT	4 cut(s)	384, 658, 1087, 1854
HpyCH4IV	ACGT	3 cut(s)	288, 1152, 1786
HpyCH4V	TGCA	7 cut(s)	101, 602, 652, 1106, 1579, 1630, 1634
HpyF10VI	GCNNNNNNNGC	3 cut(s)	98, 190, 743
HpyF3I	CTNAG	8 cut(s)	56, 218, 402, 422, 861, 1053, 1260, 1716
HpySE526I	ACGT	3 cut(s)	288, 1152, 1786
HspAI	GCGC	2 cut(s)	1763, 1765
Ksp22I	TGATCA	1 cut(s)	1825
Kzo9I	GATC	7 cut(s)	110, 349, 414, 1157, 1325, 1555, 1825
LmnI	GCTCC	7 cut(s)	14, 190, 214, 692, 1219, 1534, 1748
Lsp1109I	GCAGC	4 cut(s)	39, 1459, 1614, 1629
LweI	GCATC	2 cut(s)	507, 1115
MaeI	CTAG	6 cut(s)	45, 240, 389, 524, 1236, 1553
MaeII	ACGT	3 cut(s)	288, 1152, 1786
MaeIII	GTNAC	4 cut(s)	63, 296, 623, 946
MalI	GATC	7 cut(s)	112, 351, 416, 1159, 1327, 1557, 1827
MboI	GATC	7 cut(s)	110, 349, 414, 1157, 1325, 1555, 1825
MflI	RGATCY	1 cut(s)	414
MhlI	GDGCHC	6 cut(s)	697, 862, 1126, 1216, 1256, 1453
MlsI	TGGCCA	1 cut(s)	430
MluCI	AATT	6 cut(s)	96, 482, 537, 597, 1019, 1218
MluNI	TGGCCA	1 cut(s)	430
MlyI	GAGTC	3 cut(s)	128, 620, 1036
MmeI	TCCRAC	1 cut(s)	1019
Mox20I	TGGCCA	1 cut(s)	430
Mph1103I	ATGCAT	1 cut(s)	1108
MroXI	GAANNNNTTC	1 cut(s)	849
MscI	TGGCCA	1 cut(s)	430
MseI	TTAA	4 cut(s)	140, 330, 617, 1466
MslI	CAYNNNNRTG	2 cut(s)	1010, 1635
Msp20I	TGGCCA	1 cut(s)	430
MspA1I	CMGCKG	2 cut(s)	52, 434
MspI	CCGG	4 cut(s)	645, 916, 930, 1702
MspR9I	CCNGG	4 cut(s)	13, 917, 930, 1392
MvaI	CCWGG	2 cut(s)	13, 1392
MvnI	CGCG	1 cut(s)	1765
MwoI	GCNNNNNNNGC	3 cut(s)	98, 190, 743
NciI	CCSGG	2 cut(s)	917, 930
NdeI	CATATG	2 cut(s)	970, 1618
NdeII	GATC	7 cut(s)	110, 349, 414, 1157, 1325, 1555, 1825
NlaIV	GGNNCC	2 cut(s)	1195, 1215
NmeAIII	GCCGAG	1 cut(s)	1235
NmuCI	GTSAC	1 cut(s)	623
NsiI	ATGCAT	1 cut(s)	1108
NspI	RCATGY	4 cut(s)	1003, 1426, 1634, 1771
NspV	TTCGAA	1 cut(s)	1222
PaeI	GCATGC	1 cut(s)	1634
PauI	GCGCGC	1 cut(s)	1763
PdmI	GAANNNNTTC	1 cut(s)	849
PfeI	GAWTC	3 cut(s)	890, 1091, 1705
PkrI	GCNGC	7 cut(s)	54, 199, 736, 1474, 1629, 1644, 1673
PleI	GAGTC	3 cut(s)	128, 620, 1036
PmaCI	CACGTG	1 cut(s)	289
PmlI	CACGTG	1 cut(s)	289
PpsI	GAGTC	3 cut(s)	128, 620, 1036
Ppu21I	YACGTR	1 cut(s)	289
PpuMI	RGGWCCY	1 cut(s)	1230
PshAI	GACNNNNGTC	1 cut(s)	558
PsiI	TTATAA	2 cut(s)	411, 1167
Psp124BI	GAGCTC	2 cut(s)	697, 1256
Psp5II	RGGWCCY	1 cut(s)	1230
Psp6I	CCWGG	2 cut(s)	11, 1390
PspCI	CACGTG	1 cut(s)	289
PspFI	CCCAGC	4 cut(s)	106, 323, 829, 1209
PspGI	CCWGG	2 cut(s)	11, 1390
PspN4I	GGNNCC	2 cut(s)	1195, 1215
PspPI	GGNCC	4 cut(s)	41, 1194, 1230, 1699
PspPPI	RGGWCCY	1 cut(s)	1230
PsuI	RGATCY	1 cut(s)	414
PteI	GCGCGC	1 cut(s)	1763
PvuII	CAGCTG	1 cut(s)	434
RsaI	GTAC	4 cut(s)	87, 156, 660, 921
RsaNI	GTAC	4 cut(s)	86, 155, 659, 920
RseI	CAYNNNNRTG	2 cut(s)	1010, 1635
SacI	GAGCTC	2 cut(s)	697, 1256
SalI	GTCGAC	1 cut(s)	243
SaqAI	TTAA	4 cut(s)	140, 330, 617, 1466
SatI	GCNGC	7 cut(s)	53, 198, 735, 1473, 1628, 1643, 1672
Sau3AI	GATC	7 cut(s)	110, 349, 414, 1157, 1325, 1555, 1825
Sau96I	GGNCC	4 cut(s)	41, 1194, 1230, 1699
SchI	GAGTC	3 cut(s)	128, 620, 1036
ScrFI	CCNGG	4 cut(s)	13, 917, 930, 1392
SduI	GDGCHC	6 cut(s)	697, 862, 1126, 1216, 1256, 1453
SfaNI	GCATC	2 cut(s)	507, 1115
SfcI	CTRYAG	2 cut(s)	175, 1752
SfuI	TTCGAA	1 cut(s)	1222
SinI	GGWCC	3 cut(s)	1194, 1230, 1699
SmiMI	CAYNNNNRTG	2 cut(s)	1010, 1635
SmlI	CTYRAG	3 cut(s)	773, 923, 1811
SmoI	CTYRAG	3 cut(s)	773, 923, 1811
SphI	GCATGC	1 cut(s)	1634
Sse9I	AATT	6 cut(s)	96, 482, 537, 597, 1019, 1218
SsiI	CCGC	6 cut(s)	50, 197, 200, 734, 867, 1671
SspMI	CTAG	6 cut(s)	45, 240, 389, 524, 1236, 1553
SstI	GAGCTC	2 cut(s)	697, 1256
StyD4I	CCNGG	4 cut(s)	11, 915, 928, 1390
TaaI	ACNGT	4 cut(s)	384, 658, 1087, 1854
TaiI	ACGT	3 cut(s)	291, 1155, 1789
TaqI	TCGA	6 cut(s)	244, 893, 1156, 1222, 1246, 1612
TasI	AATT	6 cut(s)	96, 482, 537, 597, 1019, 1218
TatI	WGTACW	2 cut(s)	85, 658
TauI	GCSGC	3 cut(s)	200, 737, 1674
TfiI	GAWTC	3 cut(s)	890, 1091, 1705
Tru1I	TTAA	4 cut(s)	140, 330, 617, 1466
Tru9I	TTAA	4 cut(s)	140, 330, 617, 1466
TscAI	CASTG	4 cut(s)	108, 714, 869, 1503
TseFI	GTSAC	1 cut(s)	623
TseI	GCWGC	4 cut(s)	52, 1472, 1627, 1642
Tsp45I	GTSAC	1 cut(s)	623
TspRI	CASTG	4 cut(s)	108, 714, 869, 1503
VpaK11BI	GGWCC	3 cut(s)	1194, 1230, 1699
XbaI	TCTAGA	1 cut(s)	1552
XceI	RCATGY	4 cut(s)	1003, 1426, 1634, 1771
XmiI	GTMKAC	1 cut(s)	244
XmnI	GAANNNNTTC	1 cut(s)	849
XspI	CTAG	6 cut(s)	45, 240, 389, 524, 1236, 1553
Zsp2I	ATGCAT	1 cut(s)	1108

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.