FvH4_4g33010

Purple acid phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0003989
Physical Location & Seq
Forward (+)
31391735 .. 31393818
2084 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g33010.t1

Sequence Viewer

Length: 1038 bp
ATGGTACTTAGCAACTTGGCCATGGCTTGTCTTAGTTATGAAAAAACCAGAATGTCACGCCTTCATTTGGTTTTGGTAGTGTTACTGTATTGCATTTCTTCGGAGATTAGTACGAGTTTTGCAGAGCTTCAGAGGTTTGAACACGCACCGAAAGATGATGGCTCGGTTAGATTTCTGGTGGTCGGAGATTGGGGCAGAAGAGGGTTCTATAACCAATCCAAAGTTGCCGTGCAGATGGGAAGGATTGGAGAAAAGTTAGATATGGATTTTGTGATATCTACTGGAGATAATTTCTATGGGGATGGATTAAAGAGTGTAAAAGACCCTGCATTTTTGGACTCCTTTAAAAACATTTACACAGCTAAGAGCCTGCAAAAACAGTGGTATAGTGTTTTAGGAAATCATGACTATAGGGGTAGTACAGAAGCACAATTGAGCCCTGCCCTCCGAAAGATTGATAACCGATGGCTTTGCCTCAGATCTTTTATTGTCAATGCTGCAGATATTGCTGACTTTTTCTTCGTTGATACCACTCCATTTGTGATCAAATACATAATCGAGAAAAAACATCACTATGATTGGAGCGGGGTGTCTCCCCGTGGAATTTACATTACCAATCTTCTAAAGGATTTAGATGCAGCATTGAGGAAGTCGAGTGCCAAGTGGAAGATAGTGATCGGTCACCATGCAATCAGAAGTGCAGGGCATCACGGCGACACACATGAGCTGGTGAGGCACCTCTTGCCATTGCTCAAGGCTCACAATGTTGATATGTACATGAATGGACATGACCACTGCCTGCAGCACATTAGCAGCCTCAATAGTCCTATTCAGTATATGACAAGCGGAGCGGGTTCGAAAGCATGGAGGGGTGATATTAAGGAATACGATAGTCAGGCCATGAAGTTCTTCCATGATGGTCAAGGTTTCATGTCTGTAAACTTGACCCGATCGGATGGTTTAGTCGTGTTTTATGATGTTTTAGGCAGGGTTTTGCATACATGGAAGCTCAATAAGCAGCTTCACTCTGCTTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00740 ko01100 ko04142 ko04380 ko05323 map00740 map01100 map04142 map04380 map05323
Pfam Domains
Protein Families
Metallophos

Protein Analysis

346

Amino Acids

39.27

Weight (kDa)

9.07

Isoelectric Point (pI)

44.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metallophos PF00149 57 - 266 2.7e-18 Calcineurin-like phosphoesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 735
AccBSI CCGCTC 2 cut(s) 585, 851
AciI CCGC 3 cut(s) 585, 846, 851
AcoI YGGCCR 1 cut(s) 18
AcsI RAATTY 1 cut(s) 603
AcuI CTGAAG 1 cut(s) 113
AfaI GTAC 4 cut(s) 6, 112, 421, 776
AfiI CCNNNNNNNGG 1 cut(s) 67
AgsI TTSAA 1 cut(s) 140
AluBI AGCT 5 cut(s) 127, 362, 727, 1009, 1021
AluI AGCT 5 cut(s) 127, 362, 727, 1009, 1021
Alw26I GTCTC 1 cut(s) 597
AoxI GGCC 2 cut(s) 18, 897
ApeKI GCWGC 5 cut(s) 497, 638, 802, 813, 1018
ApoI RAATTY 1 cut(s) 603
ArsI GACNNNNNNTTYG 2 cut(s) 503, 535
Asp700I GAANNNNTTC 1 cut(s) 908
AsuHPI GGTGA 3 cut(s) 674, 742, 884
AsuII TTCGAA 1 cut(s) 857
BalI TGGCCA 1 cut(s) 20
BanI GGYRCC 1 cut(s) 735
BanII GRGCYC 1 cut(s) 440
BbvI GCAGC 5 cut(s) 484, 650, 814, 825, 1030
BccI CCATC 6 cut(s) 152, 229, 296, 459, 911, 950
BceAI ACGGC 2 cut(s) 212, 727
BcgI CGANNNNNNTGC 2 cut(s) 453, 487
BclI TGATCA 1 cut(s) 543
BcoDI GTCTC 1 cut(s) 597
BfmI CTRYAG 3 cut(s) 409, 498, 800
BglII AGATCT 1 cut(s) 479
BisI GCNGC 5 cut(s) 498, 639, 803, 814, 1019
BlsI GCNGC 5 cut(s) 499, 640, 804, 815, 1020
BmiI GGNNCC 1 cut(s) 737
BmsI GCATC 2 cut(s) 625, 715
BpmI CTGGAG 1 cut(s) 303
Bpu14I TTCGAA 1 cut(s) 857
BpuEI CTTGAG 1 cut(s) 737
BsaBI GATNNNNATC 1 cut(s) 674
BsaJI CCNNGG 2 cut(s) 21, 598
Bsc4I CCNNNNNNNGG 1 cut(s) 67
Bse1I ACTGG 1 cut(s) 286
Bse3DI GCAATG 1 cut(s) 746
Bse8I GATNNNNATC 1 cut(s) 674
BseDI CCNNGG 2 cut(s) 21, 598
BseGI GGATG 2 cut(s) 307, 961
BseJI GATNNNNATC 1 cut(s) 674
BseLI CCNNNNNNNGG 1 cut(s) 67
BseMI GCAATG 1 cut(s) 746
BseMII CTCAG 1 cut(s) 490
BseNI ACTGG 1 cut(s) 286
BseXI GCAGC 5 cut(s) 484, 650, 814, 825, 1030
BsgI GTGCAG 2 cut(s) 251, 720
Bsh1285I CGRYCG 1 cut(s) 953
BshFI GGCC 2 cut(s) 20, 899
BshNI GGYRCC 1 cut(s) 735
BsiEI CGRYCG 1 cut(s) 953
BslI CCNNNNNNNGG 1 cut(s) 67
BsmAI GTCTC 1 cut(s) 597
BsnI GGCC 2 cut(s) 20, 899
Bsp119I TTCGAA 1 cut(s) 857
Bsp1286I GDGCHC 1 cut(s) 440
Bsp1407I TGTACA 1 cut(s) 774
Bsp143I GATC 4 cut(s) 479, 543, 675, 950
Bsp19I CCATGG 1 cut(s) 21
BspACI CCGC 3 cut(s) 585, 846, 851
BspANI GGCC 2 cut(s) 20, 899
BspCNI CTCAG 1 cut(s) 489
BspHI TCATGA 1 cut(s) 403
BspLI GGNNCC 1 cut(s) 737
BspMAI CTGCAG 2 cut(s) 502, 804
BspT104I TTCGAA 1 cut(s) 857
BspT107I GGYRCC 1 cut(s) 735
BsrBI CCGCTC 2 cut(s) 585, 851
BsrDI GCAATG 1 cut(s) 746
BsrGI TGTACA 1 cut(s) 774
BsrI ACTGG 1 cut(s) 286
BssECI CCNNGG 2 cut(s) 21, 598
BssMI GATC 4 cut(s) 479, 543, 675, 950
BssT1I CCWWGG 1 cut(s) 21
Bst4CI ACNGT 2 cut(s) 87, 381
Bst6I CTCTTC 1 cut(s) 193
BstAPI GCANNNNNTGC 2 cut(s) 506, 742
BstAUI TGTACA 1 cut(s) 774
BstBI TTCGAA 1 cut(s) 857
BstC8I GCNNGC 2 cut(s) 371, 800
BstDEI CTNAG 4 cut(s) 8, 32, 363, 476
BstDSI CCRYGG 2 cut(s) 21, 598
BstEII GGTNACC 1 cut(s) 680
BstF5I GGATG 2 cut(s) 307, 961
BstKTI GATC 4 cut(s) 482, 546, 678, 953
BstMAI GTCTC 1 cut(s) 597
BstMBI GATC 4 cut(s) 479, 543, 675, 950
BstMCI CGRYCG 1 cut(s) 953
BstMWI GCNNNNNNNGC 4 cut(s) 506, 733, 742, 1015
BstPI GGTNACC 1 cut(s) 680
BstSFI CTRYAG 3 cut(s) 409, 498, 800
BstV1I GCAGC 5 cut(s) 484, 650, 814, 825, 1030
BstX2I RGATCY 1 cut(s) 479
BstYI RGATCY 1 cut(s) 479
BsuRI GGCC 2 cut(s) 20, 899
BtgI CCRYGG 2 cut(s) 21, 598
BtsCI GGATG 2 cut(s) 307, 961
BtsI GCAGTG 1 cut(s) 793
BtsIMutI CAGTG 2 cut(s) 386, 793
Cac8I GCNNGC 2 cut(s) 371, 800
CciI TCATGA 1 cut(s) 403
Csp6I GTAC 4 cut(s) 5, 111, 420, 775
CspCI CAANNNNNGTGG 4 cut(s) 362, 397, 520, 555
CviQI GTAC 4 cut(s) 5, 111, 420, 775
DdeI CTNAG 4 cut(s) 8, 32, 363, 476
DpnI GATC 4 cut(s) 481, 545, 677, 952
DpnII GATC 4 cut(s) 479, 543, 675, 950
DraI TTTAAA 1 cut(s) 346
EaeI YGGCCR 1 cut(s) 18
Eam1104I CTCTTC 1 cut(s) 193
EarI CTCTTC 1 cut(s) 193
Eco130I CCWWGG 1 cut(s) 21
Eco24I GRGCYC 1 cut(s) 440
Eco32I GATATC 1 cut(s) 276
Eco57I CTGAAG 1 cut(s) 113
Eco91I GGTNACC 1 cut(s) 680
EcoO65I GGTNACC 1 cut(s) 680
EcoRV GATATC 1 cut(s) 276
EcoT14I CCWWGG 1 cut(s) 21
EcoT38I GRGCYC 1 cut(s) 440
ErhI CCWWGG 1 cut(s) 21
FauI CCCGC 2 cut(s) 578, 844
FbaI TGATCA 1 cut(s) 543
Fnu4HI GCNGC 5 cut(s) 498, 639, 803, 814, 1019
FokI GGATG 2 cut(s) 314, 968
FriOI GRGCYC 1 cut(s) 440
Fsp4HI GCNGC 5 cut(s) 498, 639, 803, 814, 1019
GluI GCNGC 5 cut(s) 498, 639, 803, 814, 1019
GsuI CTGGAG 1 cut(s) 303
HaeIII GGCC 2 cut(s) 20, 899
HinfI GANTC 1 cut(s) 338
HphI GGTGA 3 cut(s) 674, 742, 884
Hpy166II GTNNAC 1 cut(s) 940
Hpy188I TCNGA 7 cut(s) 103, 132, 185, 449, 479, 695, 955
Hpy188III TCNNGA 2 cut(s) 404, 559
Hpy8I GTNNAC 1 cut(s) 940
HpyAV CCTTC 2 cut(s) 71, 234
HpyCH4III ACNGT 2 cut(s) 87, 381
HpyF10VI GCNNNNNNNGC 4 cut(s) 506, 733, 742, 1015
HpyF3I CTNAG 4 cut(s) 8, 32, 363, 476
Ksp22I TGATCA 1 cut(s) 543
Kzo9I GATC 4 cut(s) 479, 543, 675, 950
LmnI GCTCC 2 cut(s) 582, 848
Lsp1109I GCAGC 5 cut(s) 484, 650, 814, 825, 1030
LweI GCATC 2 cut(s) 625, 715
MaeIII GTNAC 3 cut(s) 54, 81, 680
MalI GATC 4 cut(s) 481, 545, 677, 952
MbiI CCGCTC 2 cut(s) 585, 851
MboI GATC 4 cut(s) 479, 543, 675, 950
MboII GAAGA 6 cut(s) 90, 210, 511, 611, 679, 901
MfeI CAATTG 1 cut(s) 431
MflI RGATCY 1 cut(s) 479
MhlI GDGCHC 1 cut(s) 440
MlsI TGGCCA 1 cut(s) 20
MluCI AATT 3 cut(s) 289, 431, 603
MluNI TGGCCA 1 cut(s) 20
MlyI GAGTC 1 cut(s) 332
MmeI TCCRAC 1 cut(s) 163
MnlI CCTC 9 cut(s) 126, 194, 455, 485, 639, 726, 749, 827, 861
Mox20I TGGCCA 1 cut(s) 20
MroXI GAANNNNTTC 1 cut(s) 908
MscI TGGCCA 1 cut(s) 20
MseI TTAA 3 cut(s) 308, 345, 879
MslI CAYNNNNRTG 1 cut(s) 573
Msp20I TGGCCA 1 cut(s) 20
MunI CAATTG 1 cut(s) 431
MwoI GCNNNNNNNGC 4 cut(s) 506, 733, 742, 1015
NcoI CCATGG 1 cut(s) 21
NdeII GATC 4 cut(s) 479, 543, 675, 950
NlaIV GGNNCC 1 cut(s) 737
NmuCI GTSAC 2 cut(s) 54, 680
NspV TTCGAA 1 cut(s) 857
PagI TCATGA 1 cut(s) 403
PdmI GAANNNNTTC 1 cut(s) 908
PkrI GCNGC 5 cut(s) 499, 640, 804, 815, 1020
Ple19I CGATCG 1 cut(s) 953
PleI GAGTC 1 cut(s) 332
PpsI GAGTC 1 cut(s) 332
PspEI GGTNACC 1 cut(s) 680
PspN4I GGNNCC 1 cut(s) 737
PstI CTGCAG 2 cut(s) 502, 804
PsuI RGATCY 1 cut(s) 479
PvuI CGATCG 1 cut(s) 953
RsaI GTAC 4 cut(s) 6, 112, 421, 776
RsaNI GTAC 4 cut(s) 5, 111, 420, 775
RseI CAYNNNNRTG 1 cut(s) 573
SaqAI TTAA 3 cut(s) 308, 345, 879
SatI GCNGC 5 cut(s) 498, 639, 803, 814, 1019
Sau3AI GATC 4 cut(s) 479, 543, 675, 950
SchI GAGTC 1 cut(s) 332
SduI GDGCHC 1 cut(s) 440
SetI ASST 8 cut(s) 129, 137, 364, 729, 741, 928, 1011, 1023
SfaNI GCATC 2 cut(s) 625, 715
SfcI CTRYAG 3 cut(s) 409, 498, 800
SfuI TTCGAA 1 cut(s) 857
SmiMI CAYNNNNRTG 1 cut(s) 573
SmlI CTYRAG 1 cut(s) 752
SmoI CTYRAG 1 cut(s) 752
Sse9I AATT 3 cut(s) 289, 431, 603
SsiI CCGC 3 cut(s) 585, 846, 851
StyI CCWWGG 1 cut(s) 21
TaaI ACNGT 2 cut(s) 87, 381
TaqI TCGA 3 cut(s) 558, 653, 857
TaqII GACCGA 1 cut(s) 668
TasI AATT 3 cut(s) 289, 431, 603
TatI WGTACW 2 cut(s) 419, 774
Tru1I TTAA 3 cut(s) 308, 345, 879
Tru9I TTAA 3 cut(s) 308, 345, 879
TscAI CASTG 2 cut(s) 386, 800
TseFI GTSAC 2 cut(s) 54, 680
TseI GCWGC 5 cut(s) 497, 638, 802, 813, 1018
Tsp45I GTSAC 2 cut(s) 54, 680
TspDTI ATGAA 5 cut(s) 53, 54, 794, 917, 919
TspRI CASTG 2 cut(s) 386, 800
XapI RAATTY 1 cut(s) 603
XmnI GAANNNNTTC 1 cut(s) 908
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.