Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0003989

Physical Location & Seq

Genomic Coordinates Reverse (-)

55225578 .. 55228059

Gene Structure 2482 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0410000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1512 bp

ATGCCATCTTCTTATTTATCGAAGCTTAGGACTGCAGTACAGAGATCGATTGTAGGCCAGGAAGGTGTTGTTCACGACTCGCTAGAGGGGCTAATTGGGCAAGGCAAATTGTTGTTTGGAAATTCTAGGCTGTTCCATTCGAGACCCTTTTCGGCTATTTCAGACCTGAATGCATTTCTGCCGCCGGGCACTGTTGTCGCTGCAAGGTCGGATTCGCAGTTAGTTAACCAGAGGACGCAGATTTCTGTTGTTGGGGAGATTTCGCGGATCATTTCAACTCCATCTGTGTCGGGGCCTTCGTTCCAAGTTTGTGGGTATCATATTGATTCTGTGCTTTCAGATCCCAGTCAGTTTCAGACTAAAGCCATGGCTTTGTGCGGTTCTAGAGCTCTAGTTGGGGGGTGTTCCCCGGATACTTTAACATCAAGGCGTGGGCTGCTTTCGTTGTTAACTGAAAGTGCTTGTACATTTTATAACAACAGAAGTAAAAGTTCTGATGGTTGCCAGAAAGCAAGCATGAGTTTGAAGAACAAGGGGCCTCCCAACACTAATGCAACTTATGGATATTTCGTATATGAAGTTGGGAAGAGATGGTGTAGTAACTTCCCAATAAATGGATTAGGCTCGAGAGAATTTCATAATTCTTCCACATGCTTCTCTGCTGGGACTGCCCACGATGTGTCTTTTGATAATTCTGCTCCTGAGGAGCAGCTTTCAAGTTCTACAGATTCATCAGATCAGAAGAACACAGATGCAAAGTCCTTAAAACTAAGTTCAGGATCATGCTACCTGCCCCATCCTGATAAAGAGGACACTGGCGGGGAGGATGCTCACTTCATATGTGTGAATGAACAAGCAATAGGGGTGGCAGATGGTGTTGGTGGCTGGGCAGATCATGGTGTTAACTCAGGATTGTATTCCCGAGAACTGATGTCTAATTCTGTAACAGCTGTTCAGGAGGAACCCAAAGGTTCAGTTGATCCTGCTAGGGTGTTGGAGAAAGCTCACTCCAGCACAAAAGCCAGAGGTTCCTCAACAGCATGCATCATAGCACTCACAGAACAGGGTATACATGCAATTAATTTAGGTGATAGTGGGTTTATAGTTGTTCGAGACGGGTGCACCATCTTCAGATCCCCTGTGCAGCAGCATGATTTCAATTTCACTTATCAACTGGAGAATGGAGTCAACAGTGATCTACCTAGCTCTGGCCAGGTTTTTACAGTTCCTGTTGCTCCTGGGGATGTTATAGTTGCTGGAACTGATGGCCTGTTTGACAACTTGTATAACAATGAGATTACTGCAGTTGTGGTTCATGCCATGAGAGCTGGATTAGGGCCTCAGGTGACAGCTCAAAAGATTGCAGCCTTGGCACGCCAACGAGCGCAGGACAGAGACCGGCAGACACCTTTCTCTACTGCTGCTCAAGATGCTGGGTTCCGTTACTATGGCGGCAAGCTCGATGATATCACTGTTGTAGTTTCCTATGTTACCAGTTCAAGCGATGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0003674 GO:0003824 GO:0003993 GO:0005575 GO:0005623 GO:0006793 GO:0006796 GO:0006873 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009636 GO:0009986 GO:0009987 GO:0010035 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019725 GO:0030002 GO:0030320 GO:0030643 GO:0042221 GO:0042493 GO:0042542 GO:0042578 GO:0042592 GO:0044237 GO:0044464 GO:0046677 GO:0048878 GO:0050801 GO:0050896 GO:0055062 GO:0055081 GO:0055082 GO:0055083 GO:0065007 GO:0065008 GO:0072501 GO:0072502 GO:0072505 GO:0072506 GO:0098771 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00740 ko01100 ko04142 ko04380 ko05323 map00740 map01100 map04142 map04380 map05323

Pfam Domains

Protein Families

Metallophos

Protein Analysis

503

Amino Acids

53.5

Weight (kDa)

5.85

Isoelectric Point (pI)

43.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PP2C_2	PF13672	333 - 448	3.2e-06	Protein phosphatase 2C

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003989)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17790
fragaria_vesca	FvH4_4g33010 FvH4_5g17770 FvH4_5g17770
malus_domestica	MD06G1233500.v1.1 MD14G1240300.v1.1 MD16G1013500.v1.1
prunus_persica	Prupe.1G337700_v2.0.a1 Prupe.5G237900_v2.0.a1
pyrus_communis	pycom06g20810 pycom14g20180 pycom16g01260
rosa_chinensis	RchiOBHm_Chr4g0442041 RchiOBHm_Chr7g0177841
rosa_laevigata	RLG00000005498 RLG00000006049
rosa_multiflora	Rmu_sc0002501.1_g000015 Rmu_sc0006214.1_g000006
rosa_roxburghii	Rroxscaffold_3G00275510 Rroxscaffold_5G00382960
rosa_rugosa	Rorug04G0338300 Rorug04G0338300 Rorug06G0410000
rosa_samantha	Rh4AG389900 Rh4BG403300 Rh4CG418400 Rh4DG396500 Rh7AG009500 Rh7BG009600 Rh7CG009700 Rh7DG009600
rosa_wichuraiana	Rw4G033690 Rw7G000790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	474
Acc36I	ACCTGC	1 cut(s)	798
AccB7I	CCANNNNNTGG	1 cut(s)	614
AccI	GTMKAC	1 cut(s)	1069
AccII	CGCG	1 cut(s)	265
AciI	CCGC	5 cut(s)	182, 265, 378, 819, 1452
AclWI	GGATC	5 cut(s)	275, 335, 787, 974, 1128
AcoI	YGGCCR	1 cut(s)	1210
AcsI	RAATTY	2 cut(s)	121, 632
AcuI	CTGAAG	1 cut(s)	1114
AdeI	CACNNNGTG	1 cut(s)	679
AfaI	GTAC	2 cut(s)	39, 466
AfiI	CCNNNNNNNGG	2 cut(s)	614, 1208
AgsI	TTSAA	5 cut(s)	276, 526, 717, 1159, 1500
AjnI	CCWGG	3 cut(s)	57, 1212, 1237
AluBI	AGCT	9 cut(s)	25, 389, 712, 950, 1004, 1206, 1328, 1352, 1459
AluI	AGCT	9 cut(s)	25, 389, 712, 950, 1004, 1206, 1328, 1352, 1459
Alw21I	GWGCWC	2 cut(s)	391, 1124
Alw26I	GTCTC	3 cut(s)	136, 1107, 1389
Alw44I	GTGCAC	1 cut(s)	1120
AlwI	GGATC	5 cut(s)	275, 335, 787, 974, 1128
AlwNI	CAGNNNCTG	1 cut(s)	1229
Ama87I	CYCGRG	2 cut(s)	625, 921
AoxI	GGCC	6 cut(s)	55, 293, 536, 1210, 1267, 1337
ApaLI	GTGCAC	1 cut(s)	1120
ApeKI	GCWGC	7 cut(s)	200, 436, 709, 1144, 1147, 1364, 1421
ApoI	RAATTY	2 cut(s)	121, 632
AseI	ATTAAT	1 cut(s)	1080
AspLEI	GCGC	1 cut(s)	1387
AspS9I	GGNCC	3 cut(s)	293, 536, 1337
AsuC2I	CCSGG	2 cut(s)	186, 410
AsuHPI	GGTGA	2 cut(s)	1100, 1357
AvaI	CYCGRG	2 cut(s)	625, 921
AxyI	CCTNAGG	2 cut(s)	702, 1341
BaeGI	GKGCMC	2 cut(s)	191, 1124
BalI	TGGCCA	1 cut(s)	1212
BanII	GRGCYC	1 cut(s)	391
Bbv12I	GWGCWC	2 cut(s)	391, 1124
BbvI	GCAGC	7 cut(s)	187, 423, 721, 1156, 1159, 1376, 1408
BccI	CCATC	8 cut(s)	13, 289, 491, 585, 804, 866, 1133, 1259
BcgI	CGANNNNNNTGC	4 cut(s)	178, 212, 1101, 1135
BciT130I	CCWGG	3 cut(s)	59, 1214, 1239
BciVI	GTATCC	1 cut(s)	406
BcnI	CCSGG	2 cut(s)	186, 410
BcoDI	GTCTC	3 cut(s)	136, 1107, 1389
BfaI	CTAG	6 cut(s)	83, 126, 384, 392, 987, 1203
BfmI	CTRYAG	3 cut(s)	33, 723, 1302
BfuAI	ACCTGC	1 cut(s)	798
BfuI	GTATCC	1 cut(s)	406
BisI	GCNGC	9 cut(s)	182, 201, 437, 710, 1145, 1148, 1365, 1422, 1453
BlsI	GCNGC	9 cut(s)	183, 202, 438, 711, 1146, 1149, 1366, 1423, 1454
Bme1390I	CCNGG	5 cut(s)	59, 186, 410, 1214, 1239
BmeT110I	CYCGRG	2 cut(s)	625, 921
BmgT120I	GGNCC	3 cut(s)	293, 536, 1337
BmiI	GGNNCC	5 cut(s)	294, 537, 963, 1030, 1439
BmrFI	CCNGG	5 cut(s)	59, 186, 410, 1214, 1239
BmrI	ACTGGG	1 cut(s)	339
BmsI	GCATC	5 cut(s)	742, 817, 1053, 1420, 1495
BmuI	ACTGGG	1 cut(s)	339
BpmI	CTGGAG	2 cut(s)	994, 1196
Bpu10I	CCTNAGC	1 cut(s)	26
BpuEI	CTTGAG	1 cut(s)	1410
BpuMI	CCSGG	2 cut(s)	186, 410
Bsa29I	ATCGAT	1 cut(s)	47
BsaI	GGTCTC	2 cut(s)	136, 1389
BsaJI	CCNNGG	4 cut(s)	366, 408, 1238, 1368
Bsc4I	CCNNNNNNNGG	2 cut(s)	614, 1208
Bse118I	RCCGGY	1 cut(s)	1398
Bse1I	ACTGG	4 cut(s)	345, 820, 1179, 1494
Bse21I	CCTNAGG	2 cut(s)	702, 1341
BseBI	CCWGG	3 cut(s)	59, 1214, 1239
BseCI	ATCGAT	1 cut(s)	47
BseDI	CCNNGG	4 cut(s)	366, 408, 1238, 1368
BseGI	GGATG	3 cut(s)	796, 832, 1249
BseLI	CCNNNNNNNGG	2 cut(s)	614, 1208
BseMII	CTCAG	3 cut(s)	693, 921, 1355
BseNI	ACTGG	4 cut(s)	345, 820, 1179, 1494
BseRI	GAGGAG	1 cut(s)	719
BseSI	GKGCMC	2 cut(s)	191, 1124
BseXI	GCAGC	7 cut(s)	187, 423, 721, 1156, 1159, 1376, 1408
BseYI	CCCAGC	3 cut(s)	662, 885, 1433
BsgI	GTGCAG	1 cut(s)	1163
Bsh1236I	CGCG	1 cut(s)	265
BshFI	GGCC	6 cut(s)	57, 295, 538, 1212, 1269, 1339
BshVI	ATCGAT	1 cut(s)	47
BsiHKAI	GWGCWC	2 cut(s)	391, 1124
BsiHKCI	CYCGRG	2 cut(s)	625, 921
BsiSI	CCGG	3 cut(s)	185, 410, 1399
BslFI	GGGAC	1 cut(s)	679
BslI	CCNNNNNNNGG	2 cut(s)	614, 1208
BsmAI	GTCTC	3 cut(s)	136, 1107, 1389
BsmBI	CGTCTC	1 cut(s)	1107
BsmFI	GGGAC	1 cut(s)	679
BsmI	GAATGC	1 cut(s)	175
BsnI	GGCC	6 cut(s)	57, 295, 538, 1212, 1269, 1339
Bso31I	GGTCTC	2 cut(s)	136, 1389
BsoBI	CYCGRG	2 cut(s)	625, 921
Bsp1286I	GDGCHC	3 cut(s)	191, 391, 1124
Bsp1407I	TGTACA	1 cut(s)	464
Bsp143I	GATC	9 cut(s)	44, 267, 340, 736, 779, 892, 979, 1133, 1195
Bsp19I	CCATGG	1 cut(s)	366
BspACI	CCGC	5 cut(s)	182, 265, 378, 819, 1452
BspANI	GGCC	6 cut(s)	57, 295, 538, 1212, 1269, 1339
BspCNI	CTCAG	3 cut(s)	694, 920, 1354
BspDI	ATCGAT	1 cut(s)	47
BspFNI	CGCG	1 cut(s)	265
BspLI	GGNNCC	5 cut(s)	294, 537, 963, 1030, 1439
BspMAI	CTGCAG	2 cut(s)	37, 1306
BspMI	ACCTGC	1 cut(s)	798
BspPI	GGATC	5 cut(s)	275, 335, 787, 974, 1128
BspTNI	GGTCTC	2 cut(s)	136, 1389
BsrFI	RCCGGY	1 cut(s)	1398
BsrGI	TGTACA	1 cut(s)	464
BsrI	ACTGG	4 cut(s)	345, 820, 1179, 1494
BssAI	RCCGGY	1 cut(s)	1398
BssECI	CCNNGG	4 cut(s)	366, 408, 1238, 1368
BssMI	GATC	9 cut(s)	44, 267, 340, 736, 779, 892, 979, 1133, 1195
BssNAI	GTATAC	1 cut(s)	1070
BssT1I	CCWWGG	2 cut(s)	366, 1368
Bst1107I	GTATAC	1 cut(s)	1070
Bst2UI	CCWGG	3 cut(s)	59, 1214, 1239
Bst4CI	ACNGT	4 cut(s)	193, 1193, 1225, 1474
Bst6I	CTCTTC	1 cut(s)	581
BstAUI	TGTACA	1 cut(s)	464
BstC8I	GCNNGC	4 cut(s)	514, 1042, 1375, 1457
BstDEI	CTNAG	5 cut(s)	26, 702, 770, 907, 1341
BstDSI	CCRYGG	1 cut(s)	366
BstF5I	GGATG	3 cut(s)	796, 832, 1249
BstFNI	CGCG	1 cut(s)	265
BstHHI	GCGC	1 cut(s)	1387
BstKTI	GATC	9 cut(s)	47, 270, 343, 739, 782, 895, 982, 1136, 1198
BstMAI	GTCTC	3 cut(s)	136, 1107, 1389
BstMBI	GATC	9 cut(s)	44, 267, 340, 736, 779, 892, 979, 1133, 1195
BstMWI	GCNNNNNNNGC	7 cut(s)	88, 97, 436, 668, 1325, 1370, 1430
BstNI	CCWGG	3 cut(s)	59, 1214, 1239
BstNSI	RCATGY	3 cut(s)	654, 1044, 1076
BstSCI	CCNGG	5 cut(s)	57, 184, 408, 1212, 1237
BstSFI	CTRYAG	3 cut(s)	33, 723, 1302
BstSLI	GKGCMC	2 cut(s)	191, 1124
BstUI	CGCG	1 cut(s)	265
BstV1I	GCAGC	7 cut(s)	187, 423, 721, 1156, 1159, 1376, 1408
BstX2I	RGATCY	2 cut(s)	340, 1133
BstXI	CCANNNNNNTGG	1 cut(s)	311
BstYI	RGATCY	2 cut(s)	340, 1133
BstZ17I	GTATAC	1 cut(s)	1070
Bsu15I	ATCGAT	1 cut(s)	47
Bsu36I	CCTNAGG	2 cut(s)	702, 1341
BsuI	GTATCC	1 cut(s)	406
BsuRI	GGCC	6 cut(s)	57, 295, 538, 1212, 1269, 1339
BsuTUI	ATCGAT	1 cut(s)	47
BtgI	CCRYGG	1 cut(s)	366
BtsCI	GGATG	3 cut(s)	796, 832, 1249
BtsIMutI	CAGTG	4 cut(s)	189, 813, 1198, 1470
BveI	ACCTGC	1 cut(s)	798
Cac8I	GCNNGC	4 cut(s)	514, 1042, 1375, 1457
CaiI	CAGNNNCTG	1 cut(s)	1229
CfoI	GCGC	1 cut(s)	1387
Cfr10I	RCCGGY	1 cut(s)	1398
Cfr13I	GGNCC	3 cut(s)	293, 536, 1337
ClaI	ATCGAT	1 cut(s)	47
CseI	GACGC	1 cut(s)	244
Csp6I	GTAC	2 cut(s)	38, 465
CspCI	CAANNNNNGTGG	2 cut(s)	846, 881
CviQI	GTAC	2 cut(s)	38, 465
DdeI	CTNAG	5 cut(s)	26, 702, 770, 907, 1341
DpnI	GATC	9 cut(s)	46, 269, 342, 738, 781, 894, 981, 1135, 1197
DpnII	GATC	9 cut(s)	44, 267, 340, 736, 779, 892, 979, 1133, 1195
DraIII	CACNNNGTG	1 cut(s)	679
EaeI	YGGCCR	1 cut(s)	1210
Eam1104I	CTCTTC	1 cut(s)	581
EarI	CTCTTC	1 cut(s)	581
Ecl136II	GAGCTC	1 cut(s)	389
Eco130I	CCWWGG	2 cut(s)	366, 1368
Eco24I	GRGCYC	1 cut(s)	391
Eco31I	GGTCTC	2 cut(s)	136, 1389
Eco32I	GATATC	1 cut(s)	1468
Eco53kI	GAGCTC	1 cut(s)	389
Eco57I	CTGAAG	1 cut(s)	1114
Eco81I	CCTNAGG	2 cut(s)	702, 1341
Eco88I	CYCGRG	2 cut(s)	625, 921
EcoICRI	GAGCTC	1 cut(s)	389
EcoO109I	RGGNCCY	3 cut(s)	293, 536, 1337
EcoRII	CCWGG	3 cut(s)	57, 1212, 1237
EcoRV	GATATC	1 cut(s)	1468
EcoT14I	CCWWGG	2 cut(s)	366, 1368
EcoT22I	ATGCAT	3 cut(s)	175, 1046, 1510
EcoT38I	GRGCYC	1 cut(s)	391
ErhI	CCWWGG	2 cut(s)	366, 1368
Esp3I	CGTCTC	1 cut(s)	1107
FaqI	GGGAC	1 cut(s)	679
FauI	CCCGC	1 cut(s)	812
FauNDI	CATATG	1 cut(s)	839
FblI	GTMKAC	1 cut(s)	1069
Fnu4HI	GCNGC	9 cut(s)	182, 201, 437, 710, 1145, 1148, 1365, 1422, 1453
FokI	GGATG	3 cut(s)	783, 839, 1256
FriOI	GRGCYC	1 cut(s)	391
Fsp4HI	GCNGC	9 cut(s)	182, 201, 437, 710, 1145, 1148, 1365, 1422, 1453
FspBI	CTAG	6 cut(s)	83, 126, 384, 392, 987, 1203
GlaI	GCGC	1 cut(s)	1386
GluI	GCNGC	9 cut(s)	182, 201, 437, 710, 1145, 1148, 1365, 1422, 1453
GsaI	CCCAGC	3 cut(s)	666, 889, 1437
GsuI	CTGGAG	2 cut(s)	994, 1196
HaeIII	GGCC	6 cut(s)	57, 295, 538, 1212, 1269, 1339
HapII	CCGG	3 cut(s)	185, 410, 1399
HgaI	GACGC	1 cut(s)	244
HhaI	GCGC	1 cut(s)	1387
Hin6I	GCGC	1 cut(s)	1385
HinP1I	GCGC	1 cut(s)	1385
HincII	GTYRAC	4 cut(s)	226, 450, 904, 1189
HindII	GTYRAC	4 cut(s)	226, 450, 904, 1189
HindIII	AAGCTT	1 cut(s)	23
HinfI	GANTC	5 cut(s)	77, 212, 326, 728, 1185
HpaI	GTTAAC	3 cut(s)	226, 450, 904
HpaII	CCGG	3 cut(s)	185, 410, 1399
HphI	GGTGA	2 cut(s)	1100, 1357
Hpy166II	GTNNAC	7 cut(s)	73, 226, 450, 904, 1070, 1122, 1189
Hpy188I	TCNGA	8 cut(s)	163, 211, 340, 357, 496, 736, 741, 1133
Hpy8I	GTNNAC	7 cut(s)	73, 226, 450, 904, 1070, 1122, 1189
HpyAV	CCTTC	2 cut(s)	56, 306
HpyCH4III	ACNGT	4 cut(s)	193, 1193, 1225, 1474
HpyF10VI	GCNNNNNNNGC	7 cut(s)	88, 97, 436, 668, 1325, 1370, 1430
HpyF3I	CTNAG	5 cut(s)	26, 702, 770, 907, 1341
HspAI	GCGC	1 cut(s)	1385
KspAI	GTTAAC	3 cut(s)	226, 450, 904
Kzo9I	GATC	9 cut(s)	44, 267, 340, 736, 779, 892, 979, 1133, 1195
LmnI	GCTCC	3 cut(s)	703, 706, 1240
Lsp1109I	GCAGC	7 cut(s)	187, 423, 721, 1156, 1159, 1376, 1408
LweI	GCATC	5 cut(s)	742, 817, 1053, 1420, 1495
MaeI	CTAG	6 cut(s)	83, 126, 384, 392, 987, 1203
MaeIII	GTNAC	5 cut(s)	599, 943, 1345, 1442, 1489
MalI	GATC	9 cut(s)	46, 269, 342, 738, 781, 894, 981, 1135, 1197
MboI	GATC	9 cut(s)	44, 267, 340, 736, 779, 892, 979, 1133, 1195
MboII	GAAGA	5 cut(s)	538, 598, 636, 754, 1120
MflI	RGATCY	2 cut(s)	340, 1133
MhlI	GDGCHC	3 cut(s)	191, 391, 1124
MlsI	TGGCCA	1 cut(s)	1212
MluNI	TGGCCA	1 cut(s)	1212
MlyI	GAGTC	2 cut(s)	71, 1194
MmeI	TCCRAC	2 cut(s)	189, 975
Mox20I	TGGCCA	1 cut(s)	1212
Mph1103I	ATGCAT	3 cut(s)	175, 1046, 1510
MscI	TGGCCA	1 cut(s)	1212
MseI	TTAA	6 cut(s)	225, 419, 449, 764, 903, 1080
MslI	CAYNNNNRTG	1 cut(s)	842
Msp20I	TGGCCA	1 cut(s)	1212
MspA1I	CMGCKG	1 cut(s)	950
MspI	CCGG	3 cut(s)	185, 410, 1399
MspR9I	CCNGG	5 cut(s)	59, 186, 410, 1214, 1239
Mva1269I	GAATGC	1 cut(s)	175
MvaI	CCWGG	3 cut(s)	59, 1214, 1239
MvnI	CGCG	1 cut(s)	265
MwoI	GCNNNNNNNGC	7 cut(s)	88, 97, 436, 668, 1325, 1370, 1430
NciI	CCSGG	2 cut(s)	186, 410
NcoI	CCATGG	1 cut(s)	366
NdeI	CATATG	1 cut(s)	839
NdeII	GATC	9 cut(s)	44, 267, 340, 736, 779, 892, 979, 1133, 1195
NlaIV	GGNNCC	5 cut(s)	294, 537, 963, 1030, 1439
NmuCI	GTSAC	1 cut(s)	1345
NsiI	ATGCAT	3 cut(s)	175, 1046, 1510
NspI	RCATGY	3 cut(s)	654, 1044, 1076
PaeI	GCATGC	1 cut(s)	1044
PaeR7I	CTCGAG	1 cut(s)	625
PcsI	WCGNNNNNNNCGW	1 cut(s)	296
PctI	GAATGC	1 cut(s)	175
PfeI	GAWTC	3 cut(s)	212, 326, 728
PflMI	CCANNNNNTGG	1 cut(s)	614
PkrI	GCNGC	9 cut(s)	183, 202, 438, 711, 1146, 1149, 1366, 1423, 1454
PleI	GAGTC	2 cut(s)	71, 1193
PpsI	GAGTC	2 cut(s)	71, 1193
PshBI	ATTAAT	1 cut(s)	1080
PsiI	TTATAA	1 cut(s)	474
Psp124BI	GAGCTC	1 cut(s)	391
Psp6I	CCWGG	3 cut(s)	57, 1212, 1237
PspFI	CCCAGC	3 cut(s)	662, 885, 1433
PspGI	CCWGG	3 cut(s)	57, 1212, 1237
PspN4I	GGNNCC	5 cut(s)	294, 537, 963, 1030, 1439
PspPI	GGNCC	3 cut(s)	293, 536, 1337
PsrI	GAACNNNNNNTAC	4 cut(s)	936, 968, 1053, 1085
PstI	CTGCAG	2 cut(s)	37, 1306
PstNI	CAGNNNCTG	1 cut(s)	1229
PsuI	RGATCY	2 cut(s)	340, 1133
PvuII	CAGCTG	1 cut(s)	950
RsaI	GTAC	2 cut(s)	39, 466
RsaNI	GTAC	2 cut(s)	38, 465
RseI	CAYNNNNRTG	1 cut(s)	842
SacI	GAGCTC	1 cut(s)	391
SaqAI	TTAA	6 cut(s)	225, 419, 449, 764, 903, 1080
SatI	GCNGC	9 cut(s)	182, 201, 437, 710, 1145, 1148, 1365, 1422, 1453
Sau3AI	GATC	9 cut(s)	44, 267, 340, 736, 779, 892, 979, 1133, 1195
Sau96I	GGNCC	3 cut(s)	293, 536, 1337
SchI	GAGTC	2 cut(s)	71, 1194
ScrFI	CCNGG	5 cut(s)	59, 186, 410, 1214, 1239
SduI	GDGCHC	3 cut(s)	191, 391, 1124
SfaNI	GCATC	5 cut(s)	742, 817, 1053, 1420, 1495
SfcI	CTRYAG	3 cut(s)	33, 723, 1302
Sfr274I	CTCGAG	1 cut(s)	625
SlaI	CTCGAG	1 cut(s)	625
SmiMI	CAYNNNNRTG	1 cut(s)	842
SmlI	CTYRAG	2 cut(s)	625, 1425
SmoI	CTYRAG	2 cut(s)	625, 1425
SphI	GCATGC	1 cut(s)	1044
SsiI	CCGC	5 cut(s)	182, 265, 378, 819, 1452
SspMI	CTAG	6 cut(s)	83, 126, 384, 392, 987, 1203
SstI	GAGCTC	1 cut(s)	391
StyD4I	CCNGG	5 cut(s)	57, 184, 408, 1212, 1237
StyI	CCWWGG	2 cut(s)	366, 1368
TaaI	ACNGT	4 cut(s)	193, 1193, 1225, 1474
TaqI	TCGA	6 cut(s)	20, 47, 140, 626, 1111, 1461
TatI	WGTACW	2 cut(s)	37, 464
TauI	GCSGC	2 cut(s)	184, 1455
TfiI	GAWTC	3 cut(s)	212, 326, 728
Tru1I	TTAA	6 cut(s)	225, 419, 449, 764, 903, 1080
Tru9I	TTAA	6 cut(s)	225, 419, 449, 764, 903, 1080
TscAI	CASTG	4 cut(s)	196, 820, 1198, 1477
TseFI	GTSAC	1 cut(s)	1345
TseI	GCWGC	7 cut(s)	200, 436, 709, 1144, 1147, 1364, 1421
Tsp45I	GTSAC	1 cut(s)	1345
TspDTI	ATGAA	6 cut(s)	591, 626, 720, 826, 864, 1304
TspGWI	ACGGA	1 cut(s)	1430
TspRI	CASTG	4 cut(s)	196, 820, 1198, 1477
Van91I	CCANNNNNTGG	1 cut(s)	614
VneI	GTGCAC	1 cut(s)	1120
VspI	ATTAAT	1 cut(s)	1080
XapI	RAATTY	2 cut(s)	121, 632
XbaI	TCTAGA	1 cut(s)	383
XceI	RCATGY	3 cut(s)	654, 1044, 1076
XhoI	CTCGAG	1 cut(s)	625
XmiI	GTMKAC	1 cut(s)	1069
XspI	CTAG	6 cut(s)	83, 126, 384, 392, 987, 1203
Zsp2I	ATGCAT	3 cut(s)	175, 1046, 1510

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.