Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0003989

Physical Location & Seq

Genomic Coordinates Reverse (-)

31831560 .. 31833578

Gene Structure 2019 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G337700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1020 bp

ATGGTTAGCAACTCTGCCATGGCTTGCCTTTATGAAAAAAACGTAGCTTCACGCCTTCATCTGGTATCGGTGTTTTGCATTTCTTTGGTCGTTTCCGGCTTTGCAGAGCTTCAGAGGTTTCAACACGCAACAAAAGATGATGGGTCGCTTAGCTTTTTGGTGGTTGGAGATTGGGGCAGAAGAGGGTTCTATAACCAATCCGCAGTTGCTTTACAGATGGGAAGGATTGGAGAGCAATTAGATATAGATTTTGTTGTATCCACCGGAGATAATTTCTACGGTGATGGATTAAGGGATGTAAACGATCCAGCATTTTTGGAGTCCTTCAAGGACATTTACACAGCAACTAGCTTGCAAAAACAGTGGTATAGTGTTTTAGGAAACCATGACTATAGGGGTGATACTGAGGCACAATTAAGCCCTGCCCTCCGAAAGATTGATAGCCGATGGCTTTGCCAGAGATCCTTTATTCTTAATACAGGAATTGCGGAGTTCTTTTTCGTGGACACCACTCCATTTGTGAACAAATACTTGGTTGACAAAGAACATAATTATGATTGGCGAGCAGTATCACCCCGTGGGACTTACGTCGCTAACCTTCTGCAGGATTTGAAAGTGGCATTGAACAAGTCAACAGCAAAGTGGAAGATAGTCGTTGGTCACCATGCGATCAGAAGTGTTGGACATCACGGCGACACTCCGGAGCTCATAAGTCTCCTCTTACCAATACTTAAGGCTCACAATGTTGATATGTACATGAATGGACATGACCACTGTTTGGAGCACATCAGTAGCCTCGACAGTCCTATTCAGTATTTAACAAGCGGGGCAGGTTCAAAAGCATGGAGAGGAGATGTTAAGAGTTATAAAAACAATCGAGCCATGAAGTTCTTCTATGATGGCCAAGGTTTCATGTCTGTGAAACTGACCGGATCGGATGCTAAGATTGCATTCTATGATGTTTTAGGCAGGCTTTTGCACACCTGGAAGATGTCCAAGCCGCTTCACTCTACCATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00740 ko01100 ko04142 ko04380 ko05323 map00740 map01100 map04142 map04380 map05323

Pfam Domains

Protein Families

Metallophos

Protein Analysis

340

Amino Acids

38.21

Weight (kDa)

8.22

Isoelectric Point (pI)

39.66

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003989)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17790
fragaria_vesca	FvH4_4g33010 FvH4_5g17770 FvH4_5g17770
malus_domestica	MD06G1233500.v1.1 MD14G1240300.v1.1 MD16G1013500.v1.1
prunus_persica	Prupe.1G337700_v2.0.a1 Prupe.5G237900_v2.0.a1
pyrus_communis	pycom06g20810 pycom14g20180 pycom16g01260
rosa_chinensis	RchiOBHm_Chr4g0442041 RchiOBHm_Chr7g0177841
rosa_laevigata	RLG00000005498 RLG00000006049
rosa_multiflora	Rmu_sc0002501.1_g000015 Rmu_sc0006214.1_g000006
rosa_roxburghii	Rroxscaffold_3G00275510 Rroxscaffold_5G00382960
rosa_rugosa	Rorug04G0338300 Rorug04G0338300 Rorug06G0410000
rosa_samantha	Rh4AG389900 Rh4BG403300 Rh4CG418400 Rh4DG396500 Rh7AG009500 Rh7BG009600 Rh7CG009700 Rh7DG009600
rosa_wichuraiana	Rw4G033690 Rw7G000790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	867
Acc36I	ACCTGC	1 cut(s)	821
AccB7I	CCANNNNNTGG	1 cut(s)	778
AccIII	TCCGGA	1 cut(s)	700
AciI	CCGC	4 cut(s)	201, 488, 825, 1001
AclWI	GGATC	3 cut(s)	299, 456, 940
AcoI	YGGCCR	1 cut(s)	901
AcuI	CTGAAG	1 cut(s)	95
AdeI	CACNNNGTG	1 cut(s)	578
AfaI	GTAC	1 cut(s)	755
AfiI	CCNNNNNNNGG	3 cut(s)	61, 604, 778
AflII	CTTAAG	1 cut(s)	731
AgsI	TTSAA	5 cut(s)	122, 328, 613, 625, 837
AjnI	CCWGG	1 cut(s)	983
AjuI	GAANNNNNNNTTGG	2 cut(s)	515, 547
AluBI	AGCT	5 cut(s)	47, 109, 153, 351, 706
AluI	AGCT	5 cut(s)	47, 109, 153, 351, 706
Alw21I	GWGCWC	2 cut(s)	708, 786
Alw26I	GTCTC	1 cut(s)	719
AlwI	GGATC	3 cut(s)	299, 456, 940
Aor13HI	TCCGGA	1 cut(s)	700
AoxI	GGCC	1 cut(s)	901
Asp700I	GAANNNNTTC	1 cut(s)	890
AsuHPI	GGTGA	4 cut(s)	293, 410, 564, 653
BalI	TGGCCA	1 cut(s)	903
BanII	GRGCYC	1 cut(s)	708
Bbv12I	GWGCWC	2 cut(s)	708, 786
BccI	CCATC	5 cut(s)	134, 211, 278, 441, 893
BceAI	ACGGC	1 cut(s)	706
BcgI	CGANNNNNNTGC	2 cut(s)	435, 469
BciT130I	CCWGG	1 cut(s)	985
BciVI	GTATCC	1 cut(s)	268
BcoDI	GTCTC	1 cut(s)	719
BfaI	CTAG	1 cut(s)	348
BfmI	CTRYAG	2 cut(s)	391, 602
BfrI	CTTAAG	1 cut(s)	731
BfuAI	ACCTGC	1 cut(s)	821
BfuI	GTATCC	1 cut(s)	268
BisI	GCNGC	1 cut(s)	1001
BlpI	GCTNAGC	1 cut(s)	149
BlsI	GCNGC	1 cut(s)	1002
Bme1390I	CCNGG	1 cut(s)	985
BmrFI	CCNGG	1 cut(s)	985
BmsI	GCATC	1 cut(s)	928
BoxI	GACNNNNGTC	1 cut(s)	587
Bpu1102I	GCTNAGC	1 cut(s)	149
BsaJI	CCNNGG	3 cut(s)	18, 577, 904
BsaWI	WCCGGW	3 cut(s)	263, 700, 929
Bsc4I	CCNNNNNNNGG	3 cut(s)	61, 604, 778
BseAI	TCCGGA	1 cut(s)	700
BseBI	CCWGG	1 cut(s)	985
BseDI	CCNNGG	3 cut(s)	18, 577, 904
BseGI	GGATG	2 cut(s)	301, 943
BseLI	CCNNNNNNNGG	3 cut(s)	61, 604, 778
BseMII	CTCAG	1 cut(s)	396
BseRI	GAGGAG	2 cut(s)	707, 864
BshFI	GGCC	1 cut(s)	903
BsiHKAI	GWGCWC	2 cut(s)	708, 786
BsiSI	CCGG	4 cut(s)	96, 264, 701, 930
BslFI	GGGAC	1 cut(s)	595
BslI	CCNNNNNNNGG	3 cut(s)	61, 604, 778
BsmAI	GTCTC	1 cut(s)	719
BsmFI	GGGAC	1 cut(s)	595
BsmI	GAATGC	1 cut(s)	950
BsnI	GGCC	1 cut(s)	903
Bsp1286I	GDGCHC	2 cut(s)	708, 786
Bsp13I	TCCGGA	1 cut(s)	700
Bsp1407I	TGTACA	1 cut(s)	753
Bsp143I	GATC	4 cut(s)	304, 461, 669, 932
Bsp1720I	GCTNAGC	1 cut(s)	149
Bsp19I	CCATGG	1 cut(s)	18
BspACI	CCGC	4 cut(s)	201, 488, 825, 1001
BspANI	GGCC	1 cut(s)	903
BspCNI	CTCAG	1 cut(s)	397
BspEI	TCCGGA	1 cut(s)	700
BspMAI	CTGCAG	1 cut(s)	606
BspMI	ACCTGC	1 cut(s)	821
BspPI	GGATC	3 cut(s)	299, 456, 940
BspTI	CTTAAG	1 cut(s)	731
BsrGI	TGTACA	1 cut(s)	753
BssECI	CCNNGG	3 cut(s)	18, 577, 904
BssMI	GATC	4 cut(s)	304, 461, 669, 932
BssT1I	CCWWGG	2 cut(s)	18, 904
Bst2UI	CCWGG	1 cut(s)	985
Bst4CI	ACNGT	4 cut(s)	281, 363, 776, 803
Bst6I	CTCTTC	1 cut(s)	175
BstAFI	CTTAAG	1 cut(s)	731
BstAUI	TGTACA	1 cut(s)	753
BstC8I	GCNNGC	4 cut(s)	25, 353, 564, 971
BstDEI	CTNAG	3 cut(s)	149, 405, 942
BstDSI	CCRYGG	2 cut(s)	18, 577
BstEII	GGTNACC	1 cut(s)	659
BstENI	CCTNNNNNAGG	1 cut(s)	602
BstF5I	GGATG	2 cut(s)	301, 943
BstKTI	GATC	4 cut(s)	307, 464, 672, 935
BstMAI	GTCTC	1 cut(s)	719
BstMBI	GATC	4 cut(s)	304, 461, 669, 932
BstMWI	GCNNNNNNNGC	1 cut(s)	947
BstNI	CCWGG	1 cut(s)	985
BstPAI	GACNNNNGTC	1 cut(s)	587
BstPI	GGTNACC	1 cut(s)	659
BstSCI	CCNGG	1 cut(s)	983
BstSFI	CTRYAG	2 cut(s)	391, 602
BstX2I	RGATCY	1 cut(s)	461
BstYI	RGATCY	1 cut(s)	461
BsuI	GTATCC	1 cut(s)	268
BsuRI	GGCC	1 cut(s)	903
BtgI	CCRYGG	2 cut(s)	18, 577
BtsCI	GGATG	2 cut(s)	301, 943
BtsIMutI	CAGTG	2 cut(s)	368, 772
BveI	ACCTGC	1 cut(s)	821
Cac8I	GCNNGC	4 cut(s)	25, 353, 564, 971
Csp6I	GTAC	1 cut(s)	754
CspCI	CAANNNNNGTGG	4 cut(s)	344, 379, 499, 534
CviAII	CATG	9 cut(s)	19, 386, 665, 757, 767, 843, 883, 913, 1015
CviQI	GTAC	1 cut(s)	754
DdeI	CTNAG	3 cut(s)	149, 405, 942
DpnI	GATC	4 cut(s)	306, 463, 671, 934
DpnII	GATC	4 cut(s)	304, 461, 669, 932
DraIII	CACNNNGTG	1 cut(s)	578
EaeI	YGGCCR	1 cut(s)	901
Eam1104I	CTCTTC	1 cut(s)	175
EarI	CTCTTC	1 cut(s)	175
Ecl136II	GAGCTC	1 cut(s)	706
Eco130I	CCWWGG	2 cut(s)	18, 904
Eco24I	GRGCYC	1 cut(s)	708
Eco53kI	GAGCTC	1 cut(s)	706
Eco57I	CTGAAG	1 cut(s)	95
Eco91I	GGTNACC	1 cut(s)	659
EcoICRI	GAGCTC	1 cut(s)	706
EcoNI	CCTNNNNNAGG	1 cut(s)	602
EcoO65I	GGTNACC	1 cut(s)	659
EcoRII	CCWGG	1 cut(s)	983
EcoT14I	CCWWGG	2 cut(s)	18, 904
EcoT38I	GRGCYC	1 cut(s)	708
ErhI	CCWWGG	2 cut(s)	18, 904
FaeI	CATG	9 cut(s)	22, 389, 668, 760, 770, 846, 886, 916, 1018
FaqI	GGGAC	1 cut(s)	595
FatI	CATG	9 cut(s)	18, 385, 664, 756, 766, 842, 882, 912, 1014
FauI	CCCGC	1 cut(s)	818
Fnu4HI	GCNGC	1 cut(s)	1001
FokI	GGATG	2 cut(s)	308, 950
FriOI	GRGCYC	1 cut(s)	708
Fsp4HI	GCNGC	1 cut(s)	1001
FspBI	CTAG	1 cut(s)	348
GluI	GCNGC	1 cut(s)	1001
HaeIII	GGCC	1 cut(s)	903
HapII	CCGG	4 cut(s)	96, 264, 701, 930
Hin1II	CATG	9 cut(s)	22, 389, 668, 760, 770, 846, 886, 916, 1018
HincII	GTYRAC	2 cut(s)	538, 633
HindII	GTYRAC	2 cut(s)	538, 633
HinfI	GANTC	1 cut(s)	320
HpaII	CCGG	4 cut(s)	96, 264, 701, 930
HphI	GGTGA	4 cut(s)	293, 410, 564, 653
Hpy166II	GTNNAC	5 cut(s)	301, 505, 523, 538, 633
Hpy188I	TCNGA	4 cut(s)	114, 431, 674, 937
Hpy188III	TCNNGA	1 cut(s)	701
Hpy8I	GTNNAC	5 cut(s)	301, 505, 523, 538, 633
Hpy99I	CGWCG	1 cut(s)	593
HpyAV	CCTTC	4 cut(s)	65, 216, 334, 608
HpyCH4III	ACNGT	4 cut(s)	281, 363, 776, 803
HpyCH4IV	ACGT	2 cut(s)	42, 588
HpyCH4V	TGCA	6 cut(s)	78, 104, 355, 604, 950, 979
HpyF10VI	GCNNNNNNNGC	1 cut(s)	947
HpyF3I	CTNAG	3 cut(s)	149, 405, 942
HpySE526I	ACGT	2 cut(s)	42, 588
Hsp92II	CATG	9 cut(s)	22, 389, 668, 760, 770, 846, 886, 916, 1018
Kpn2I	TCCGGA	1 cut(s)	700
Kzo9I	GATC	4 cut(s)	304, 461, 669, 932
LmnI	GCTCC	2 cut(s)	703, 781
LweI	GCATC	1 cut(s)	928
MaeI	CTAG	1 cut(s)	348
MaeII	ACGT	2 cut(s)	42, 588
MaeIII	GTNAC	1 cut(s)	659
MalI	GATC	4 cut(s)	306, 463, 671, 934
MboI	GATC	4 cut(s)	304, 461, 669, 932
MboII	GAAGA	4 cut(s)	192, 658, 883, 1000
MflI	RGATCY	1 cut(s)	461
MhlI	GDGCHC	2 cut(s)	708, 786
MlsI	TGGCCA	1 cut(s)	903
MluCI	AATT	5 cut(s)	236, 271, 413, 483, 550
MluNI	TGGCCA	1 cut(s)	903
MlyI	GAGTC	1 cut(s)	329
MmeI	TCCRAC	2 cut(s)	145, 661
MnlI	CCTC	7 cut(s)	108, 176, 400, 437, 728, 806, 842
Mox20I	TGGCCA	1 cut(s)	903
MroI	TCCGGA	1 cut(s)	700
MroXI	GAANNNNTTC	1 cut(s)	890
MscI	TGGCCA	1 cut(s)	903
MseI	TTAA	6 cut(s)	290, 416, 474, 732, 818, 858
MslI	CAYNNNNRTG	2 cut(s)	552, 917
Msp20I	TGGCCA	1 cut(s)	903
MspCI	CTTAAG	1 cut(s)	731
MspI	CCGG	4 cut(s)	96, 264, 701, 930
MspR9I	CCNGG	1 cut(s)	985
Mva1269I	GAATGC	1 cut(s)	950
MvaI	CCWGG	1 cut(s)	985
MwoI	GCNNNNNNNGC	1 cut(s)	947
NcoI	CCATGG	1 cut(s)	18
NdeII	GATC	4 cut(s)	304, 461, 669, 932
NlaIII	CATG	9 cut(s)	22, 389, 668, 760, 770, 846, 886, 916, 1018
NmuCI	GTSAC	1 cut(s)	659
PctI	GAATGC	1 cut(s)	950
PdmI	GAANNNNTTC	1 cut(s)	890
PflMI	CCANNNNNTGG	1 cut(s)	778
PkrI	GCNGC	1 cut(s)	1002
PleI	GAGTC	1 cut(s)	328
PpsI	GAGTC	1 cut(s)	328
PshAI	GACNNNNGTC	1 cut(s)	587
PsiI	TTATAA	1 cut(s)	867
Psp124BI	GAGCTC	1 cut(s)	708
Psp6I	CCWGG	1 cut(s)	983
PspEI	GGTNACC	1 cut(s)	659
PspGI	CCWGG	1 cut(s)	983
PstI	CTGCAG	1 cut(s)	606
PsuI	RGATCY	1 cut(s)	461
RsaI	GTAC	1 cut(s)	755
RsaNI	GTAC	1 cut(s)	754
RseI	CAYNNNNRTG	2 cut(s)	552, 917
SacI	GAGCTC	1 cut(s)	708
SaqAI	TTAA	6 cut(s)	290, 416, 474, 732, 818, 858
SatI	GCNGC	1 cut(s)	1001
Sau3AI	GATC	4 cut(s)	304, 461, 669, 932
SchI	GAGTC	1 cut(s)	329
ScrFI	CCNGG	1 cut(s)	985
SduI	GDGCHC	2 cut(s)	708, 786
SfaNI	GCATC	1 cut(s)	928
SfcI	CTRYAG	2 cut(s)	391, 602
SmiMI	CAYNNNNRTG	2 cut(s)	552, 917
SmlI	CTYRAG	1 cut(s)	731
SmoI	CTYRAG	1 cut(s)	731
Sse9I	AATT	5 cut(s)	236, 271, 413, 483, 550
SsiI	CCGC	4 cut(s)	201, 488, 825, 1001
SspMI	CTAG	1 cut(s)	348
SstI	GAGCTC	1 cut(s)	708
StyD4I	CCNGG	1 cut(s)	983
StyI	CCWWGG	2 cut(s)	18, 904
TaaI	ACNGT	4 cut(s)	281, 363, 776, 803
TaiI	ACGT	2 cut(s)	45, 591
TaqI	TCGA	2 cut(s)	798, 877
TasI	AATT	5 cut(s)	236, 271, 413, 483, 550
TatI	WGTACW	1 cut(s)	753
TauI	GCSGC	1 cut(s)	1003
Tru1I	TTAA	6 cut(s)	290, 416, 474, 732, 818, 858
Tru9I	TTAA	6 cut(s)	290, 416, 474, 732, 818, 858
TscAI	CASTG	2 cut(s)	368, 779
TseFI	GTSAC	1 cut(s)	659
Tsp45I	GTSAC	1 cut(s)	659
TspDTI	ATGAA	5 cut(s)	47, 48, 773, 899, 901
TspRI	CASTG	2 cut(s)	368, 779
Van91I	CCANNNNNTGG	1 cut(s)	778
Vha464I	CTTAAG	1 cut(s)	731
XagI	CCTNNNNNAGG	1 cut(s)	602
XmnI	GAANNNNTTC	1 cut(s)	890
XspI	CTAG	1 cut(s)	348

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.