FvH4_5g10140
MYB Family

Trihelix transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0006309
Physical Location & Seq
Forward (+)
5781401 .. 5788216
6816 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g10140.t1

Sequence Viewer

Length: 2310 bp
ATGCAAGGAGGTGGAGGAGGGACGCAATCCCATTACGGAGTTGTAGTTTCTTCAGCTGCTGAAGCAAGTACTGCTGCTGCTCCGTCCATGGCGGCGGAGGCAGCAGACCAAGCGCATGTGGTGGAAGAGGCCTCGCCTATCAGCAGCAGGCCGCCGGCTGGAGGAGCAATCTCCGCCGTCAACTTGGACGAGCTCATGACGCTGTCCGGCGCGGCAGCTGACGTGGCAGCAGATCAAGGCGGTGGTGGCGGTGGAGGGTCCGGCGGGAACAGATGGCCGCGTCAGGAGACACTGGCGCTTCTCAAGATTCGTTCCGAGATGGACGTGGCCTTCCGCGACGCCACTCTCAAAGGTCCCCTATGGGAAGATGTTTCCAGGAAGCTAGCGGAGTTGGGATACAAGAGGAATGCCAAGAAGTGCAAAGAGAAATTCGAGAACGTTCACAAGTATTACAAACGGACCAAAGAAGGCCGCGCCGGAAGGCAAGACGGCAAGAGTTACAAGTTTTTCAGTGAGCTTGAGGCGCTCCACGGCTCCCCCTCCCCCAACGTGTCGGCTTCTCCGCCTGTACACGTCACCACCGCCGCTGCTGCCCCGGTTTCTATTGGCTTCGGATCCATCAGCAACCCCATGCCCATTTCGTCTTTCCGGATGACTGGTGGGAATACTTCTACTGTGCCAATTATGTCCACGCAAGCTACTGGTGCAATTCCTATAATGCCCTCGTCACAGCCACCGCTGCCTGCGAGCACCGCCGCTCCGATGGATATTAATTTCTCATCCAACAGCTCGTCCTCGTCCCATGGCGAGGATGAGGACTACGAGGACGACGATGAGGTGGCGGGAGAGCCGCCGGCGAACACGAGCCGGAAGAGGAAGAGAGGGACGTCGTCGAGAGAGAGCGGTGGGAGCACGAGGAGGATGATGGAGTTTTTCGAGATTCTGATGAAGCAAGTGATGCAGAAGCAAGAGACGATGCAGCAGAGGTTTCTGGAAGTGATTGAGAAGAGAGAGCAGGATCGAAACATAAGGGAAGAAGCTTGGAAGAGGCAAGAGATGGCCAGGCTGACTAGAGAGCACGAGCTCATGACTCAAGAGCGAGCGATTTCAGCTTCCAGAGACGCCGCGATTATCGCATTTCTGCAGAAAATTACCGGCCAGACTATCCAATTGCCTCCGCCGCTAAACGTGCACAATGCTCCTCCGCCGCCAGTGCCGCCGTCTGTGTCGGTCCATGTCACGCCTGTATCAGCACCACCGCCACCTCTAGCGCAACAACAGTCACTACACCAAGTTCATCAGCATCAACCACAGCAGCAGACTCCACCTACTCAAATTTCACGGCATCAAATTCGAACTTCGATCCCTCCAACTCCTAGTGCTAATCAGACGGAGGTAGTTATGGCTGTGCCGGAGCAACAGGTGGCACAGTCGCAGGAGATTGTAGTCGGTAGTGGAGGAGGTTTCGAGGCGACAACCTCATCTTCGAGGTGGCCGAAGGCTGAAGTTCTCGCACTGATAAAGCTGAGGAGCGGATTGGAGACTAGGTATCAAGAGGCTGGGCCGAAAGGGCCACTTTGGGAGGAGATTTCCGCAGGGATGCAGCGAATGGGGTACAAGAGGAATCCCAAGAGGTGCAAAGAGAAATGGGAGAACATCAACAAGTACTTCAAGAAAGTGAAGGAGAGCAACAAGGTTAGGCCGGAAGATGCGAAAACGTGTCCCTATTTTCACGAACTTGATGCACTCTACCGGAAAAGGATACTCGGCGGTGGCCCTAGCGGAGGAAGCAGCAGCTCATTGGGTAATCAGACCGTCCAACAACAGCCACAACAAGCACCGCCGCAGCCGAAATTGGATTCTGCTGCCCAAGGGACAGTGGCAAATACACAACAAACACAAGGAACAGTAGCAGCTACTGATCAATCAGTAAACAAGAGTGGAGATGATAGCCCAAATCTGCAAAAAAATCTATTCGGAGATGCACCTGAAGAGGCAGCCAAGAAGCCAGAAGACATTGTGAAGGAGTTGATGGGGCAACAACAACAACATCATCATCAAGTTCTCAACCAACAAGGGGTACAACAGCAATTAGTAGTAGAAGACTACGATAGAGTCGAGGAAGGTGATAGCGACGTTAATCTCGATCAAGATGAGGAGGAAGACGAAGAGGACGAAGAGGATGAAGAAATGGATGACGAGAGCAGGAAGATGGATTATAAGATAGAGTTTCAGAAGCAACAAAACACAGGCCCTTCATCTAATGGGGGAGGCAATGGGGCACCCTCCTTCTTGGCAATGGTTCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000902 GO:0000904 GO:0001101 GO:0001558 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006275 GO:0006351 GO:0006355 GO:0006725 GO:0006807 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0008156 GO:0008361 GO:0009058 GO:0009059 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009653 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0009991 GO:0010026 GO:0010035 GO:0010090 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010564 GO:0010605 GO:0010629 GO:0010948 GO:0016043 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030154 GO:0030308 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031668 GO:0032502 GO:0032535 GO:0032774 GO:0032875 GO:0032876 GO:0032989 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0040008 GO:0042221 GO:0042631 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045786 GO:0045892 GO:0045926 GO:0045934 GO:0046483 GO:0048468 GO:0048519 GO:0048523 GO:0048580 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051128 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065008 GO:0070887 GO:0071214 GO:0071229 GO:0071462 GO:0071496 GO:0071704 GO:0071840 GO:0080090 GO:0090066 GO:0090304 GO:0090329 GO:0090558 GO:0090626 GO:0097159 GO:0097659 GO:0104004 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1901700 GO:1901701 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000037 GO:2000038 GO:2000104 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-bind_4

Protein Analysis

770

Amino Acids

83.55

Weight (kDa)

5.56

Isoelectric Point (pI)

66.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-bind_4 PF13837 90 - 176 9.3e-24 Myb/SANT-like DNA-binding domain
Myb_DNA-bind_4 PF13837 496 - 583 1.4e-25 Myb/SANT-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2220
AatII GACGTC 1 cut(s) 890
AccB1I GGYRCC 1 cut(s) 2281
AccBSI CCGCTC 3 cut(s) 758, 903, 1533
AccII CGCG 5 cut(s) 212, 280, 336, 474, 1127
AccIII TCCGGA 1 cut(s) 648
AclI AACGTT 1 cut(s) 438
AclWI GGATC 4 cut(s) 609, 622, 1026, 1357
AcoI YGGCCR 4 cut(s) 275, 1059, 1156, 1493
AcsI RAATTY 3 cut(s) 428, 1335, 1350
AcuI CTGAAG 4 cut(s) 36, 81, 1524, 2010
AcyI GRCGYC 3 cut(s) 339, 887, 1122
AfaI GTAC 5 cut(s) 70, 570, 1616, 1667, 2082
AfiI CCNNNNNNNGG 5 cut(s) 158, 161, 808, 1784, 2077
AflIII ACRYGT 3 cut(s) 549, 571, 1718
AgsI TTSAA 1 cut(s) 1672
AjiI CACGTC 3 cut(s) 223, 325, 574
AjnI CCWGG 2 cut(s) 374, 1061
Alw21I GWGCWC 6 cut(s) 195, 752, 914, 1080, 1086, 1194
Alw26I GTCTC 4 cut(s) 281, 965, 1113, 1535
Alw44I GTGCAC 1 cut(s) 1190
AlwI GGATC 4 cut(s) 609, 622, 1026, 1357
AlwNI CAGNNNCTG 2 cut(s) 59, 1919
Aor13HI TCCGGA 1 cut(s) 648
ApaLI GTGCAC 1 cut(s) 1190
ApoI RAATTY 3 cut(s) 428, 1335, 1350
AseI ATTAAT 1 cut(s) 771
AspLEI GCGC 6 cut(s) 115, 212, 298, 476, 526, 1273
AspS9I GGNCC 8 cut(s) 258, 353, 459, 1231, 1562, 1571, 1775, 2252
AsuC2I CCSGG 1 cut(s) 596
AsuHPI GGTGA 2 cut(s) 568, 2138
AsuII TTCGAA 1 cut(s) 1354
AsuNHI GCTAGC 1 cut(s) 382
AvaII GGWCC 4 cut(s) 258, 353, 459, 1231
BaeGI GKGCMC 2 cut(s) 1194, 2284
BaeI ACNNNNGTAYC 2 cut(s) 1230, 1263
BalI TGGCCA 1 cut(s) 1061
BamHI GGATCC 1 cut(s) 614
BanI GGYRCC 1 cut(s) 2281
BanII GRGCYC 2 cut(s) 195, 1086
BauI CACGAG 3 cut(s) 862, 913, 1079
BbsI GAAGAC 3 cut(s) 2019, 2109, 2169
Bbv12I GWGCWC 6 cut(s) 195, 752, 914, 1080, 1086, 1194
BbvCI CCTCAGC 1 cut(s) 1526
BccI CCATC 8 cut(s) 267, 313, 626, 757, 919, 1051, 2026, 2206
BceAI ACGGC 5 cut(s) 161, 505, 547, 1204, 1358
BcgI CGANNNNNNTGC 4 cut(s) 1334, 1368, 1724, 1758
BciT130I CCWGG 2 cut(s) 376, 1063
BciVI GTATCC 2 cut(s) 389, 1755
BclI TGATCA 1 cut(s) 1921
BcnI CCSGG 1 cut(s) 596
BcoDI GTCTC 4 cut(s) 281, 965, 1113, 1535
BfaI CTAG 6 cut(s) 383, 1071, 1268, 1377, 1545, 1779
BfmI CTRYAG 1 cut(s) 1142
BfoI RGCGCY 2 cut(s) 299, 527
BfuI GTATCC 2 cut(s) 389, 1755
BglI GCCNNNNNGGC 1 cut(s) 1570
BmcAI AGTACT 2 cut(s) 70, 1667
Bme1390I CCNGG 3 cut(s) 376, 596, 1063
Bme18I GGWCC 4 cut(s) 258, 353, 459, 1231
BmgBI CACGTC 3 cut(s) 223, 325, 574
BmgT120I GGNCC 8 cut(s) 258, 353, 459, 1231, 1562, 1571, 1775, 2252
BmiI GGNNCC 5 cut(s) 259, 355, 535, 616, 2283
BmrFI CCNGG 3 cut(s) 376, 596, 1063
BmsI GCATC 8 cut(s) 948, 966, 1312, 1354, 1590, 1699, 1732, 1972
BmtI GCTAGC 1 cut(s) 386
BpiI GAAGAC 3 cut(s) 2019, 2109, 2169
BpmI CTGGAG 1 cut(s) 180
Bpu10I CCTNAGC 1 cut(s) 1526
Bpu14I TTCGAA 1 cut(s) 1354
BpuEI CTTGAG 3 cut(s) 287, 539, 1077
BpuMI CCSGG 1 cut(s) 596
BsaHI GRCGYC 3 cut(s) 339, 887, 1122
BsaJI CCNNGG 5 cut(s) 87, 529, 594, 802, 1870
BsaWI WCCGGW 2 cut(s) 648, 1752
BsaXI ACNNNNNCTCC 6 cut(s) 30, 60, 742, 772, 1532, 1562
Bsc4I CCNNNNNNNGG 5 cut(s) 158, 161, 808, 1784, 2077
Bse118I RCCGGY 3 cut(s) 154, 853, 1154
Bse1I ACTGG 4 cut(s) 297, 661, 706, 1211
Bse3DI GCAATG 2 cut(s) 2281, 2304
BseAI TCCGGA 1 cut(s) 648
BseBI CCWGG 2 cut(s) 376, 1063
BseDI CCNNGG 5 cut(s) 87, 529, 594, 802, 1870
BseGI GGATG 7 cut(s) 657, 779, 817, 927, 1605, 2188, 2200
BseLI CCNNNNNNNGG 5 cut(s) 158, 161, 808, 1784, 2077
BseMI GCAATG 2 cut(s) 2281, 2304
BseMII CTCAG 1 cut(s) 1517
BseNI ACTGG 4 cut(s) 297, 661, 706, 1211
BseRI GAGGAG 8 cut(s) 30, 177, 931, 1191, 1473, 1543, 1598, 2171
BseSI GKGCMC 2 cut(s) 1194, 2284
BseYI CCCAGC 1 cut(s) 1559
Bsh1236I CGCG 5 cut(s) 212, 280, 336, 474, 1127
BshNI GGYRCC 1 cut(s) 2281
BsiHKAI GWGCWC 6 cut(s) 195, 752, 914, 1080, 1086, 1194
BslFI GGGAC 6 cut(s) 34, 339, 784, 898, 1707, 1888
BslI CCNNNNNNNGG 5 cut(s) 158, 161, 808, 1784, 2077
BsmAI GTCTC 4 cut(s) 281, 965, 1113, 1535
BsmBI CGTCTC 2 cut(s) 965, 1113
BsmFI GGGAC 6 cut(s) 34, 339, 784, 898, 1707, 1888
BsmI GAATGC 1 cut(s) 412
Bsp119I TTCGAA 1 cut(s) 1354
Bsp1286I GDGCHC 7 cut(s) 195, 752, 914, 1080, 1086, 1194, 2284
Bsp13I TCCGGA 1 cut(s) 648
Bsp1407I TGTACA 1 cut(s) 568
Bsp143I GATC 6 cut(s) 232, 614, 1018, 1362, 1921, 2146
Bsp19I CCATGG 2 cut(s) 87, 802
BspCNI CTCAG 1 cut(s) 1518
BspEI TCCGGA 1 cut(s) 648
BspFNI CGCG 5 cut(s) 212, 280, 336, 474, 1127
BspHI TCATGA 2 cut(s) 195, 1086
BspLI GGNNCC 5 cut(s) 259, 355, 535, 616, 2283
BspMAI CTGCAG 1 cut(s) 1146
BspOI GCTAGC 1 cut(s) 386
BspPI GGATC 4 cut(s) 609, 622, 1026, 1357
BspT104I TTCGAA 1 cut(s) 1354
BspT107I GGYRCC 1 cut(s) 2281
BsrBI CCGCTC 3 cut(s) 758, 903, 1533
BsrDI GCAATG 2 cut(s) 2281, 2304
BsrFI RCCGGY 3 cut(s) 154, 853, 1154
BsrGI TGTACA 1 cut(s) 568
BsrI ACTGG 4 cut(s) 297, 661, 706, 1211
BssAI RCCGGY 3 cut(s) 154, 853, 1154
BssECI CCNNGG 5 cut(s) 87, 529, 594, 802, 1870
BssMI GATC 6 cut(s) 232, 614, 1018, 1362, 1921, 2146
BssNI GRCGYC 3 cut(s) 339, 887, 1122
BssSI CACGAG 3 cut(s) 862, 913, 1079
BssT1I CCWWGG 3 cut(s) 87, 802, 1870
Bst2BI CACGAG 3 cut(s) 862, 913, 1079
Bst2UI CCWGG 2 cut(s) 376, 1063
Bst4CI ACNGT 6 cut(s) 676, 1281, 1431, 1816, 1879, 1909
Bst6I CTCTTC 8 cut(s) 120, 866, 872, 1001, 1040, 1986, 2163, 2172
BstACI GRCGYC 3 cut(s) 339, 887, 1122
BstAPI GCANNNNNTGC 2 cut(s) 71, 958
BstAUI TGTACA 1 cut(s) 568
BstBI TTCGAA 1 cut(s) 1354
BstC8I GCNNGC 8 cut(s) 149, 156, 384, 696, 744, 748, 855, 1101
BstDEI CTNAG 1 cut(s) 1526
BstDSI CCRYGG 3 cut(s) 87, 529, 802
BstENI CCTNNNNNAGG 1 cut(s) 1782
BstF5I GGATG 7 cut(s) 657, 779, 817, 927, 1605, 2188, 2200
BstFNI CGCG 5 cut(s) 212, 280, 336, 474, 1127
BstH2I RGCGCY 2 cut(s) 299, 527
BstHHI GCGC 6 cut(s) 115, 212, 298, 476, 526, 1273
BstKTI GATC 6 cut(s) 235, 617, 1021, 1365, 1924, 2149
BstMAI GTCTC 4 cut(s) 281, 965, 1113, 1535
BstMBI GATC 6 cut(s) 232, 614, 1018, 1362, 1921, 2146
BstNI CCWGG 2 cut(s) 376, 1063
BstNSI RCATGY 1 cut(s) 119
BstSCI CCNGG 3 cut(s) 374, 594, 1061
BstSFI CTRYAG 1 cut(s) 1142
BstSLI GKGCMC 2 cut(s) 1194, 2284
BstUI CGCG 5 cut(s) 212, 280, 336, 474, 1127
BstV2I GAAGAC 3 cut(s) 2019, 2109, 2169
BstX2I RGATCY 1 cut(s) 614
BstYI RGATCY 1 cut(s) 614
BsuI GTATCC 2 cut(s) 389, 1755
BtgI CCRYGG 3 cut(s) 87, 529, 802
BtrI CACGTC 3 cut(s) 223, 325, 574
BtsCI GGATG 7 cut(s) 657, 779, 817, 927, 1605, 2188, 2200
BtsIMutI CAGTG 5 cut(s) 290, 517, 1218, 1514, 1884
Cac8I GCNNGC 8 cut(s) 149, 156, 384, 696, 744, 748, 855, 1101
CaiI CAGNNNCTG 2 cut(s) 59, 1919
CciI TCATGA 2 cut(s) 195, 1086
CfoI GCGC 6 cut(s) 115, 212, 298, 476, 526, 1273
Cfr10I RCCGGY 3 cut(s) 154, 853, 1154
Cfr13I GGNCC 8 cut(s) 258, 353, 459, 1231, 1562, 1571, 1775, 2252
CseI GACGC 5 cut(s) 31, 208, 269, 347, 1130
Csp6I GTAC 5 cut(s) 69, 569, 1615, 1666, 2081
CviAII CATG 7 cut(s) 88, 116, 196, 631, 803, 1087, 1235
CviQI GTAC 5 cut(s) 69, 569, 1615, 1666, 2081
DdeI CTNAG 1 cut(s) 1526
DpnI GATC 6 cut(s) 234, 616, 1020, 1364, 1923, 2148
DpnII GATC 6 cut(s) 232, 614, 1018, 1362, 1921, 2146
EaeI YGGCCR 4 cut(s) 275, 1059, 1156, 1493
Eam1104I CTCTTC 8 cut(s) 120, 866, 872, 1001, 1040, 1986, 2163, 2172
EarI CTCTTC 8 cut(s) 120, 866, 872, 1001, 1040, 1986, 2163, 2172
EciI GGCGGA 5 cut(s) 110, 163, 552, 1167, 1194
Ecl136II GAGCTC 2 cut(s) 193, 1084
Eco130I CCWWGG 3 cut(s) 87, 802, 1870
Eco147I AGGCCT 1 cut(s) 131
Eco24I GRGCYC 2 cut(s) 195, 1086
Eco47I GGWCC 4 cut(s) 258, 353, 459, 1231
Eco53kI GAGCTC 2 cut(s) 193, 1084
Eco57I CTGAAG 4 cut(s) 36, 81, 1524, 2010
EcoICRI GAGCTC 2 cut(s) 193, 1084
EcoNI CCTNNNNNAGG 1 cut(s) 1782
EcoO109I RGGNCCY 2 cut(s) 353, 2252
EcoRII CCWGG 2 cut(s) 374, 1061
EcoT14I CCWWGG 3 cut(s) 87, 802, 1870
EcoT38I GRGCYC 2 cut(s) 195, 1086
ErhI CCWWGG 3 cut(s) 87, 802, 1870
Esp3I CGTCTC 2 cut(s) 965, 1113
FaeI CATG 7 cut(s) 91, 119, 199, 634, 806, 1090, 1238
FalI AAGNNNNNCTT 2 cut(s) 1560, 1592
FaqI GGGAC 6 cut(s) 34, 339, 784, 898, 1707, 1888
FatI CATG 7 cut(s) 87, 115, 195, 630, 802, 1086, 1234
FauI CCCGC 2 cut(s) 257, 835
FbaI TGATCA 1 cut(s) 1921
FokI GGATG 7 cut(s) 664, 766, 824, 934, 1612, 2195, 2207
FriOI GRGCYC 2 cut(s) 195, 1086
FspBI CTAG 6 cut(s) 383, 1071, 1268, 1377, 1545, 1779
GlaI GCGC 6 cut(s) 114, 211, 297, 475, 525, 1272
GsaI CCCAGC 1 cut(s) 1563
GsuI CTGGAG 1 cut(s) 180
HaeII RGCGCY 2 cut(s) 299, 527
HgaI GACGC 5 cut(s) 31, 208, 269, 347, 1130
HhaI GCGC 6 cut(s) 115, 212, 298, 476, 526, 1273
Hin1I GRCGYC 3 cut(s) 339, 887, 1122
Hin1II CATG 7 cut(s) 91, 119, 199, 634, 806, 1090, 1238
Hin6I GCGC 6 cut(s) 113, 210, 296, 474, 524, 1271
HinP1I GCGC 6 cut(s) 113, 210, 296, 474, 524, 1271
HincII GTYRAC 1 cut(s) 181
HindII GTYRAC 1 cut(s) 181
HindIII AAGCTT 1 cut(s) 1038
HinfI GANTC 7 cut(s) 307, 940, 1090, 1321, 1624, 1859, 2115
HphI GGTGA 2 cut(s) 568, 2138
Hpy166II GTNNAC 6 cut(s) 181, 442, 571, 690, 1192, 1933
Hpy188I TCNGA 8 cut(s) 316, 614, 762, 945, 1389, 1812, 1979, 2235
Hpy8I GTNNAC 6 cut(s) 181, 442, 571, 690, 1192, 1933
Hpy99I CGWCG 5 cut(s) 341, 833, 892, 895, 2138
HpyAV CCTTC 9 cut(s) 340, 461, 474, 1492, 1675, 2017, 2117, 2265, 2299
HpyCH4III ACNGT 6 cut(s) 676, 1281, 1431, 1816, 1879, 1909
HpyCH4IV ACGT 9 cut(s) 222, 324, 438, 549, 573, 887, 1188, 1718, 2136
HpyF3I CTNAG 1 cut(s) 1526
HpySE526I ACGT 9 cut(s) 222, 324, 438, 549, 573, 887, 1188, 1718, 2136
Hsp92I GRCGYC 3 cut(s) 339, 887, 1122
Hsp92II CATG 7 cut(s) 91, 119, 199, 634, 806, 1090, 1238
HspAI GCGC 6 cut(s) 113, 210, 296, 474, 524, 1271
Kpn2I TCCGGA 1 cut(s) 648
KroI GCCGGC 2 cut(s) 154, 853
KroNI GCCGGC 2 cut(s) 156, 855
Ksp22I TGATCA 1 cut(s) 1921
Kzo9I GATC 6 cut(s) 232, 614, 1018, 1362, 1921, 2146
LmnI GCTCC 9 cut(s) 85, 164, 531, 539, 763, 909, 1204, 1414, 1530
LweI GCATC 8 cut(s) 948, 966, 1312, 1354, 1590, 1699, 1732, 1972
MaeI CTAG 6 cut(s) 383, 1071, 1268, 1377, 1545, 1779
MaeII ACGT 9 cut(s) 222, 324, 438, 549, 573, 887, 1188, 1718, 2136
MaeIII GTNAC 5 cut(s) 497, 574, 726, 1237, 1281
MalI GATC 6 cut(s) 234, 616, 1020, 1364, 1923, 2148
MbiI CCGCTC 3 cut(s) 758, 903, 1533
MboI GATC 6 cut(s) 232, 614, 1018, 1362, 1921, 2146
MfeI CAATTG 1 cut(s) 1169
MflI RGATCY 1 cut(s) 614
MhlI GDGCHC 7 cut(s) 195, 752, 914, 1080, 1086, 1194, 2284
MlsI TGGCCA 1 cut(s) 1061
MluNI TGGCCA 1 cut(s) 1061
MlyI GAGTC 3 cut(s) 1084, 1315, 2124
MmeI TCCRAC 3 cut(s) 807, 1394, 1843
Mox20I TGGCCA 1 cut(s) 1061
MreI CGCCGGCG 1 cut(s) 853
MroI TCCGGA 1 cut(s) 648
MroNI GCCGGC 2 cut(s) 154, 853
MscI TGGCCA 1 cut(s) 1061
MseI TTAA 2 cut(s) 771, 2139
Msp20I TGGCCA 1 cut(s) 1061
MspA1I CMGCKG 4 cut(s) 56, 218, 587, 739
MspR9I CCNGG 3 cut(s) 376, 596, 1063
MunI CAATTG 1 cut(s) 1169
Mva1269I GAATGC 1 cut(s) 412
MvaI CCWGG 2 cut(s) 376, 1063
MvnI CGCG 5 cut(s) 212, 280, 336, 474, 1127
NaeI GCCGGC 2 cut(s) 156, 855
NciI CCSGG 1 cut(s) 596
NcoI CCATGG 2 cut(s) 87, 802
NdeII GATC 6 cut(s) 232, 614, 1018, 1362, 1921, 2146
NgoMIV GCCGGC 2 cut(s) 154, 853
NheI GCTAGC 1 cut(s) 382
NlaIII CATG 7 cut(s) 91, 119, 199, 634, 806, 1090, 1238
NlaIV GGNNCC 5 cut(s) 259, 355, 535, 616, 2283
NmeAIII GCCGAG 1 cut(s) 1746
NmuCI GTSAC 4 cut(s) 574, 726, 1237, 1281
NspI RCATGY 1 cut(s) 119
NspV TTCGAA 1 cut(s) 1354
PagI TCATGA 2 cut(s) 195, 1086
PceI AGGCCT 1 cut(s) 131
PcsI WCGNNNNNNNCGW 5 cut(s) 828, 1493, 2115, 2142, 2172
PctI GAATGC 1 cut(s) 412
PdiI GCCGGC 2 cut(s) 156, 855
PfeI GAWTC 4 cut(s) 307, 940, 1624, 1859
PflFI GACNNNGTC 2 cut(s) 202, 889
PfoI TCCNGGA 1 cut(s) 374
PleI GAGTC 3 cut(s) 1084, 1315, 2123
PpsI GAGTC 3 cut(s) 1084, 1315, 2123
PpuMI RGGWCCY 1 cut(s) 353
PshBI ATTAAT 1 cut(s) 771
PsiI TTATAA 1 cut(s) 2220
Psp124BI GAGCTC 2 cut(s) 195, 1086
Psp1406I AACGTT 1 cut(s) 438
Psp5II RGGWCCY 1 cut(s) 353
Psp6I CCWGG 2 cut(s) 374, 1061
PspFI CCCAGC 1 cut(s) 1559
PspGI CCWGG 2 cut(s) 374, 1061
PspN4I GGNNCC 5 cut(s) 259, 355, 535, 616, 2283
PspPI GGNCC 8 cut(s) 258, 353, 459, 1231, 1562, 1571, 1775, 2252
PspPPI RGGWCCY 1 cut(s) 353
PstI CTGCAG 1 cut(s) 1146
PstNI CAGNNNCTG 2 cut(s) 59, 1919
PsuI RGATCY 1 cut(s) 614
PsyI GACNNNGTC 2 cut(s) 202, 889
PvuII CAGCTG 2 cut(s) 56, 218
RsaI GTAC 5 cut(s) 70, 570, 1616, 1667, 2082
RsaNI GTAC 5 cut(s) 69, 569, 1615, 1666, 2081
SacI GAGCTC 2 cut(s) 195, 1086
SaqAI TTAA 2 cut(s) 771, 2139
Sau3AI GATC 6 cut(s) 232, 614, 1018, 1362, 1921, 2146
Sau96I GGNCC 8 cut(s) 258, 353, 459, 1231, 1562, 1571, 1775, 2252
ScaI AGTACT 2 cut(s) 70, 1667
SchI GAGTC 3 cut(s) 1084, 1315, 2124
ScrFI CCNGG 3 cut(s) 376, 596, 1063
SduI GDGCHC 7 cut(s) 195, 752, 914, 1080, 1086, 1194, 2284
SfaNI GCATC 8 cut(s) 948, 966, 1312, 1354, 1590, 1699, 1732, 1972
SfcI CTRYAG 1 cut(s) 1142
SfiI GGCCNNNNNGGCC 1 cut(s) 1570
SfuI TTCGAA 1 cut(s) 1354
SgrAI CRCCGGYG 1 cut(s) 853
SinI GGWCC 4 cut(s) 258, 353, 459, 1231
SmlI CTYRAG 3 cut(s) 302, 518, 1092
SmoI CTYRAG 3 cut(s) 302, 518, 1092
SseBI AGGCCT 1 cut(s) 131
SspMI CTAG 6 cut(s) 383, 1071, 1268, 1377, 1545, 1779
SstI GAGCTC 2 cut(s) 195, 1086
StuI AGGCCT 1 cut(s) 131
StyD4I CCNGG 3 cut(s) 374, 594, 1061
StyI CCWWGG 3 cut(s) 87, 802, 1870
TaaI ACNGT 6 cut(s) 676, 1281, 1431, 1816, 1879, 1909
TaiI ACGT 9 cut(s) 225, 327, 441, 552, 576, 890, 1191, 1721, 2139
TaqII GACCGA 1 cut(s) 1219
TatI WGTACW 3 cut(s) 68, 568, 1665
TfiI GAWTC 4 cut(s) 307, 940, 1624, 1859
Tru1I TTAA 2 cut(s) 771, 2139
Tru9I TTAA 2 cut(s) 771, 2139
TscAI CASTG 5 cut(s) 297, 517, 1218, 1521, 1884
TseFI GTSAC 4 cut(s) 574, 726, 1237, 1281
Tsp45I GTSAC 4 cut(s) 574, 726, 1237, 1281
TspDTI ATGAA 4 cut(s) 962, 1286, 2199, 2247
TspGWI ACGGA 4 cut(s) 51, 72, 472, 1406
TspRI CASTG 5 cut(s) 297, 517, 1218, 1521, 1884
Tth111I GACNNNGTC 2 cut(s) 202, 889
VneI GTGCAC 1 cut(s) 1190
VpaK11BI GGWCC 4 cut(s) 258, 353, 459, 1231
VspI ATTAAT 1 cut(s) 771
XagI CCTNNNNNAGG 1 cut(s) 1782
XapI RAATTY 3 cut(s) 428, 1335, 1350
XceI RCATGY 1 cut(s) 119
XspI CTAG 6 cut(s) 383, 1071, 1268, 1377, 1545, 1779
ZraI GACGTC 1 cut(s) 888
ZrmI AGTACT 2 cut(s) 70, 1667
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.