RLG00000004723
MYB Family

Trihelix transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0006309
Physical Location & Seq
Forward (+)
61731564 .. 61734901
3338 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000004723

Sequence Viewer

Length: 2286 bp
ATGCAAGGCGGAGCAGGAGGGACGCAGTCCCATTACGGAGCTTCAGCTTCAGCTCCAGCTCCAGCTCCAGCTGCCGAAGGGGCCGCTGCTACTACTTCCATGGCGGCGGAGGCAGCAGCAGACCAAACGCATGTAGTTGAAGAGGCCTCGCCCATCAGCAGCAGGCCGCCGGCGGGAGGAGCAATCTCCGCCGTCAATTTGGACGAGCTCATGACGCTCTCCGGTGCAGCAGCTGACGTGGCGGCAGATCAAGGCGGCGGCGGCGGTGGAGGGTCCGGCGGCGGGAACAGATGGCCGCGTCAGGAGACGCTGGCGCTTCTTAAGATTCGGTCCGAGATGGATGTGGCCTTCCGCGACGCCACTCTCAAAGGTCCCTTATGGGAAGATGTTTCCAGGAAGCTAGCGGAGTTGGGTTACAAGCGAAATGCGAAGAAGTGCAAAGAGAAATTCGAAAACGTTCACAAGTATTATAAGAGGACCAAAGAAGGCCGGGCCGGGCGGCAAGACGGCAAGAGTTACAAGTTTTTCAGTGAGCTGGAGGCGCTCCACGGAACCGCCAACGTGTCGGCTTCTCCGCCGGTCCACGTCACCACCGCAGCTACCAACACTCCGGTTTCTATCGGTTTCGGATCCATCAGCAGCCCGATGCCCATTTCGTCTTTCCGGATGACTAGTGGCAGTGGCACCACTTCTACTATTCCGGTTATGAGTCCGGGTGCAATTCCAGTGATGCCCTCGTCCCAACGACCGCCGGCGACCACCGCCACCGCCACTCCCATGGCCATGGACATTAATTTCTCTTCCAACAGCTCCTCCTCTTCCTCGCACGGCGAGGACGATGAGTACGAGGACGACGATGACGTGGCGGGAGAGCCGTCGACGAACACGAGCCGGAAGCGGAAGAGAGGGACGTCGTCGTCGAGAGAGAGCGGCGGAAGCACGAGAAGGATGATGGAGTTTTTCGAGATTCTGATGAAGCAGGTGATGCAGAAGCAAGAGACGATGCAGCAGAGGTTTCTGGAAGTGATTGAGAAGAGGGAGCAAGATCGGAACACAAGGGAGGAAGCTTGGAAGAGGCAAGAGATGGTCAGGCTGACTAGAGAGCACGAGCTCATGACTCAAGAGCGAGCCATTTCGGCTTCCAGAGACGCCGCCATTATCGCATTTCTGCAGAAAATTACCGGCCAGACTATCCAATTGCCTCCGCCCCTAAACGTCCACAATGCTCCTCCGCCGCCGGTGCCGCCGTCTGTGTCGTCGGTCCATGTCACGCCGGTATCAGCACCACCACCGCCAGTTCAACAATTTCATCAGCATCAACCGCACAGTACCCCAACAGCTCAAGTTTCACGGCATCAAATTCAAACTTCGATCCCTCCTAATCCTCAGACGGAGGTAGTTATGGCTGTTGTGCCGGAGCAACAGGTGGCACCGCCACAGGAGAATGTAGTCGGTAGTGGAGGAGGTTTTGAGGCAACAACCTCATCTTCGAGGTGGCCCAAGGCGGAAGTTCTTGCACTGATAAAGCTGAGGAGCGGACTGGAGACTAGGTATCAAGAGGCTGGGCCGAAAGGCCCACTTTGGGAGGAGATTTCTGCAGGGATGCAGCGAATGGGGTACAAGAGGAATCCTAAGAGGTGCAAAGAGAAATGGGAGAACATCAACAAGTACTTCAAGAAAGTGAAGGAGAGCAACAAGGCCAGGCCCGAAGATGCTAAAACGTGTCCTTATTTTCACGAACTTGATGCACTCTACCGGAAAAGGATACTCGGCGGTGGAAGCAGCAGCTCATTGGGTAATCAGAATATCCAACAACAGCCACAACAAGCACCGGCTACTCAAGGGACACTAGCAGCTACTGTGCCTGCACCGCAAACACAAGGAACAGTAGCAGCTACTGATCAATCAGGAAACAAGAGTGGTGATCATACCCCAAATCTGCAAAAGAATCTCTTTGGAGATGCACCTGAAGAGGCAGCCAAGAAGCCAGAAGACATTGTGAAGGAGTTGATGGGGCAACAACAACATCCACAACAAGTACTCAACCAACAAGGGGTACAGCAGCAATTAGTAGTAGAAGACTATGATAGAGTTGAGGAAGCTGACAGCGACATCAATCTCGATCAAGATGAGGAGGAAGACGAAGATGACGAAGAGGATGAAGAAATGGATGAGGAGAGCAGGAAGATGGATTATAAGATAGAGTTTCAGAAGCAACAGAATACAGGCCCTTCATCTAATGGGGGAGGCAATGGGGCACCCTCCTTCTTGGCAATGGTTCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000902 GO:0000904 GO:0001101 GO:0001558 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006275 GO:0006351 GO:0006355 GO:0006725 GO:0006807 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0008156 GO:0008361 GO:0009058 GO:0009059 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009653 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0009991 GO:0010026 GO:0010035 GO:0010090 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010564 GO:0010605 GO:0010629 GO:0010948 GO:0016043 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030154 GO:0030308 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031668 GO:0032502 GO:0032535 GO:0032774 GO:0032875 GO:0032876 GO:0032989 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0040008 GO:0042221 GO:0042631 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045786 GO:0045892 GO:0045926 GO:0045934 GO:0046483 GO:0048468 GO:0048519 GO:0048523 GO:0048580 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051128 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065008 GO:0070887 GO:0071214 GO:0071229 GO:0071462 GO:0071496 GO:0071704 GO:0071840 GO:0080090 GO:0090066 GO:0090304 GO:0090329 GO:0090558 GO:0090626 GO:0097159 GO:0097659 GO:0104004 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1901700 GO:1901701 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000037 GO:2000038 GO:2000104 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-bind_4

Protein Analysis

762

Amino Acids

82.39

Weight (kDa)

5.57

Isoelectric Point (pI)

63.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-bind_4 PF13837 96 - 182 9.2e-24 Myb/SANT-like DNA-binding domain
Myb_DNA-bind_4 PF13837 497 - 584 1.4e-25 Myb/SANT-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 471, 2196
AarI CACCTGC 1 cut(s) 970
AasI GACNNNNNNGTC 1 cut(s) 916
AatII GACGTC 1 cut(s) 914
Acc36I ACCTGC 1 cut(s) 970
AccB1I GGYRCC 4 cut(s) 683, 1240, 1429, 2257
AccBSI CCGCTC 2 cut(s) 930, 1536
AccI GTMKAC 1 cut(s) 878
AccII CGCG 2 cut(s) 298, 354
AccIII TCCGGA 1 cut(s) 663
AclI AACGTT 1 cut(s) 456
AclWI GGATC 3 cut(s) 624, 637, 1366
AcoI YGGCCR 3 cut(s) 293, 780, 1183
AcsI RAATTY 2 cut(s) 446, 1359
AcuI CTGAAG 3 cut(s) 27, 33, 1989
AcyI GRCGYC 3 cut(s) 357, 911, 1149
AfaI GTAC 6 cut(s) 845, 1330, 1619, 1670, 2040, 2058
AfiI CCNNNNNNNGG 5 cut(s) 173, 176, 282, 1582, 2053
AflII CTTAAG 1 cut(s) 320
AflIII ACRYGT 2 cut(s) 561, 1721
AgsI TTSAA 5 cut(s) 140, 1301, 1364, 1675, 2282
AhlI ACTAGT 1 cut(s) 671
AjiI CACGTC 3 cut(s) 238, 586, 862
AjnI CCWGG 2 cut(s) 392, 1700
Alw21I GWGCWC 3 cut(s) 210, 1107, 1113
Alw26I GTCTC 4 cut(s) 299, 992, 1140, 1538
AlwI GGATC 3 cut(s) 624, 637, 1366
AlwNI CAGNNNCTG 3 cut(s) 233, 1859, 1898
Aor13HI TCCGGA 1 cut(s) 663
ApoI RAATTY 2 cut(s) 446, 1359
AseI ATTAAT 1 cut(s) 792
Asp700I GAANNNNTTC 1 cut(s) 456
AspLEI GCGC 2 cut(s) 316, 544
AsuC2I CCSGG 3 cut(s) 491, 496, 714
AsuHPI GGTGA 3 cut(s) 580, 994, 1934
AsuII TTCGAA 1 cut(s) 450
AsuNHI GCTAGC 1 cut(s) 400
AvaII GGWCC 6 cut(s) 273, 330, 371, 477, 580, 1261
BaeGI GKGCMC 1 cut(s) 2260
BaeI ACNNNNGTAYC 2 cut(s) 1260, 1293
BalI TGGCCA 1 cut(s) 782
BamHI GGATCC 1 cut(s) 629
BanI GGYRCC 4 cut(s) 683, 1240, 1429, 2257
BanII GRGCYC 2 cut(s) 210, 1113
BauI CACGAG 3 cut(s) 886, 940, 1106
BbsI GAAGAC 3 cut(s) 1998, 2085, 2145
Bbv12I GWGCWC 3 cut(s) 210, 1107, 1113
BbvCI CCTCAGC 1 cut(s) 1529
BccI CCATC 8 cut(s) 161, 285, 331, 641, 946, 1078, 2005, 2182
BceAI ACGGC 6 cut(s) 176, 523, 844, 859, 1231, 1367
BcgI CGANNNNNNTGC 2 cut(s) 1727, 1761
BciT130I CCWGG 2 cut(s) 394, 1702
BciVI GTATCC 1 cut(s) 1758
BclI TGATCA 2 cut(s) 1900, 1924
BcnI CCSGG 3 cut(s) 491, 496, 714
BcoDI GTCTC 4 cut(s) 299, 992, 1140, 1538
BcuI ACTAGT 1 cut(s) 671
BfaI CTAG 5 cut(s) 401, 672, 1098, 1548, 1850
BfmI CTRYAG 2 cut(s) 1169, 1596
BfoI RGCGCY 2 cut(s) 317, 545
BfrI CTTAAG 1 cut(s) 320
BfuAI ACCTGC 1 cut(s) 970
BfuI GTATCC 1 cut(s) 1758
BglI GCCNNNNNGGC 2 cut(s) 80, 1136
BmcAI AGTACT 2 cut(s) 1670, 2040
Bme1390I CCNGG 5 cut(s) 394, 491, 496, 714, 1702
Bme18I GGWCC 6 cut(s) 273, 330, 371, 477, 580, 1261
BmgBI CACGTC 3 cut(s) 238, 586, 862
BmiI GGNNCC 9 cut(s) 82, 274, 373, 553, 631, 685, 1242, 1431, 2259
BmrFI CCNGG 5 cut(s) 394, 491, 496, 714, 1702
BmtI GCTAGC 1 cut(s) 404
BpiI GAAGAC 3 cut(s) 1998, 2085, 2145
BpmI CTGGAG 5 cut(s) 39, 45, 51, 557, 1562
Bpu10I CCTNAGC 1 cut(s) 1529
Bpu14I TTCGAA 1 cut(s) 450
BpuEI CTTGAG 3 cut(s) 1104, 1326, 1824
BpuMI CCSGG 3 cut(s) 491, 496, 714
BsaHI GRCGYC 3 cut(s) 357, 911, 1149
BsaJI CCNNGG 5 cut(s) 99, 547, 777, 783, 1500
BsaWI WCCGGW 5 cut(s) 221, 610, 663, 700, 1755
BsaXI ACNNNNNCTCC 8 cut(s) 592, 622, 757, 787, 797, 827, 1535, 1565
Bsc4I CCNNNNNNNGG 5 cut(s) 173, 176, 282, 1582, 2053
Bse118I RCCGGY 7 cut(s) 169, 577, 751, 1181, 1237, 1273, 1831
Bse1I ACTGG 3 cut(s) 725, 1295, 1545
Bse3DI GCAATG 2 cut(s) 2257, 2280
BseAI TCCGGA 1 cut(s) 663
BseBI CCWGG 2 cut(s) 394, 1702
BseDI CCNNGG 5 cut(s) 99, 547, 777, 783, 1500
BseGI GGATG 7 cut(s) 346, 672, 954, 1608, 2026, 2164, 2176
BseLI CCNNNNNNNGG 5 cut(s) 173, 176, 282, 1582, 2053
BseMI GCAATG 2 cut(s) 2257, 2280
BseMII CTCAG 2 cut(s) 1400, 1520
BseNI ACTGG 3 cut(s) 725, 1295, 1545
BseRI GAGGAG 9 cut(s) 192, 802, 805, 1218, 1476, 1546, 1601, 2147, 2189
BseSI GKGCMC 1 cut(s) 2260
BseYI CCCAGC 1 cut(s) 1562
BsgI GTGCAG 2 cut(s) 246, 1851
Bsh1236I CGCG 2 cut(s) 298, 354
Bsh1285I CGRYCG 1 cut(s) 749
BshNI GGYRCC 4 cut(s) 683, 1240, 1429, 2257
BsiEI CGRYCG 1 cut(s) 749
BsiHKAI GWGCWC 3 cut(s) 210, 1107, 1113
BslFI GGGAC 6 cut(s) 13, 34, 357, 724, 922, 1858
BslI CCNNNNNNNGG 5 cut(s) 173, 176, 282, 1582, 2053
BsmAI GTCTC 4 cut(s) 299, 992, 1140, 1538
BsmBI CGTCTC 3 cut(s) 299, 992, 1140
BsmFI GGGAC 6 cut(s) 13, 34, 357, 724, 922, 1858
Bsp119I TTCGAA 1 cut(s) 450
Bsp1286I GDGCHC 4 cut(s) 210, 1107, 1113, 2260
Bsp13I TCCGGA 1 cut(s) 663
Bsp143I GATC 7 cut(s) 247, 629, 1045, 1371, 1900, 1924, 2122
Bsp19I CCATGG 3 cut(s) 99, 777, 783
BspCNI CTCAG 2 cut(s) 1399, 1521
BspEI TCCGGA 1 cut(s) 663
BspFNI CGCG 2 cut(s) 298, 354
BspHI TCATGA 2 cut(s) 210, 1113
BspLI GGNNCC 9 cut(s) 82, 274, 373, 553, 631, 685, 1242, 1431, 2259
BspMAI CTGCAG 2 cut(s) 1173, 1600
BspMI ACCTGC 1 cut(s) 970
BspOI GCTAGC 1 cut(s) 404
BspPI GGATC 3 cut(s) 624, 637, 1366
BspT104I TTCGAA 1 cut(s) 450
BspT107I GGYRCC 4 cut(s) 683, 1240, 1429, 2257
BspTI CTTAAG 1 cut(s) 320
BsrBI CCGCTC 2 cut(s) 930, 1536
BsrDI GCAATG 2 cut(s) 2257, 2280
BsrFI RCCGGY 7 cut(s) 169, 577, 751, 1181, 1237, 1273, 1831
BsrI ACTGG 3 cut(s) 725, 1295, 1545
BssAI RCCGGY 7 cut(s) 169, 577, 751, 1181, 1237, 1273, 1831
BssECI CCNNGG 5 cut(s) 99, 547, 777, 783, 1500
BssMI GATC 7 cut(s) 247, 629, 1045, 1371, 1900, 1924, 2122
BssNI GRCGYC 3 cut(s) 357, 911, 1149
BssSI CACGAG 3 cut(s) 886, 940, 1106
BssT1I CCWWGG 4 cut(s) 99, 777, 783, 1500
Bst2BI CACGAG 3 cut(s) 886, 940, 1106
Bst2UI CCWGG 2 cut(s) 394, 1702
Bst4CI ACNGT 3 cut(s) 1328, 1861, 1888
Bst6I CTCTTC 8 cut(s) 135, 805, 823, 896, 1028, 1067, 1965, 2148
BstACI GRCGYC 3 cut(s) 357, 911, 1149
BstAFI CTTAAG 1 cut(s) 320
BstAPI GCANNNNNTGC 1 cut(s) 985
BstBI TTCGAA 1 cut(s) 450
BstC8I GCNNGC 7 cut(s) 164, 171, 312, 402, 753, 1128, 1866
BstDEI CTNAG 3 cut(s) 1386, 1529, 1632
BstDSI CCRYGG 4 cut(s) 99, 547, 777, 783
BstF5I GGATG 7 cut(s) 346, 672, 954, 1608, 2026, 2164, 2176
BstFNI CGCG 2 cut(s) 298, 354
BstH2I RGCGCY 2 cut(s) 317, 545
BstHHI GCGC 2 cut(s) 316, 544
BstKTI GATC 7 cut(s) 250, 632, 1048, 1374, 1903, 1927, 2125
BstMAI GTCTC 4 cut(s) 299, 992, 1140, 1538
BstMBI GATC 7 cut(s) 247, 629, 1045, 1371, 1900, 1924, 2122
BstMCI CGRYCG 1 cut(s) 749
BstNI CCWGG 2 cut(s) 394, 1702
BstNSI RCATGY 1 cut(s) 134
BstSCI CCNGG 5 cut(s) 392, 489, 494, 712, 1700
BstSFI CTRYAG 2 cut(s) 1169, 1596
BstSLI GKGCMC 1 cut(s) 2260
BstUI CGCG 2 cut(s) 298, 354
BstV2I GAAGAC 3 cut(s) 1998, 2085, 2145
BstX2I RGATCY 1 cut(s) 629
BstXI CCANNNNNNTGG 2 cut(s) 778, 784
BstYI RGATCY 1 cut(s) 629
BsuI GTATCC 1 cut(s) 1758
BtgI CCRYGG 4 cut(s) 99, 547, 777, 783
BtrI CACGTC 3 cut(s) 238, 586, 862
BtsCI GGATG 7 cut(s) 346, 672, 954, 1608, 2026, 2164, 2176
BtsI GCAGTG 1 cut(s) 685
BtsIMutI CAGTG 4 cut(s) 535, 685, 732, 1517
BveI ACCTGC 1 cut(s) 970
Cac8I GCNNGC 7 cut(s) 164, 171, 312, 402, 753, 1128, 1866
CaiI CAGNNNCTG 3 cut(s) 233, 1859, 1898
CciI TCATGA 2 cut(s) 210, 1113
CfoI GCGC 2 cut(s) 316, 544
Cfr10I RCCGGY 7 cut(s) 169, 577, 751, 1181, 1237, 1273, 1831
CpoI CGGWCCG 1 cut(s) 330
CseI GACGC 6 cut(s) 31, 223, 287, 316, 365, 1157
Csp6I GTAC 6 cut(s) 844, 1329, 1618, 1669, 2039, 2057
CspI CGGWCCG 1 cut(s) 330
CviAII CATG 7 cut(s) 100, 131, 211, 778, 784, 1114, 1265
CviQI GTAC 6 cut(s) 844, 1329, 1618, 1669, 2039, 2057
DdeI CTNAG 3 cut(s) 1386, 1529, 1632
DpnI GATC 7 cut(s) 249, 631, 1047, 1373, 1902, 1926, 2124
DpnII GATC 7 cut(s) 247, 629, 1045, 1371, 1900, 1924, 2122
DrdI GACNNNNNNGTC 1 cut(s) 916
DseDI GACNNNNNNGTC 1 cut(s) 916
EaeI YGGCCR 3 cut(s) 293, 780, 1183
Eam1104I CTCTTC 8 cut(s) 135, 805, 823, 896, 1028, 1067, 1965, 2148
EarI CTCTTC 8 cut(s) 135, 805, 823, 896, 1028, 1067, 1965, 2148
EciI GGCGGA 8 cut(s) 24, 122, 178, 564, 948, 1194, 1221, 1520
Ecl136II GAGCTC 2 cut(s) 208, 1111
Eco130I CCWWGG 4 cut(s) 99, 777, 783, 1500
Eco147I AGGCCT 1 cut(s) 146
Eco24I GRGCYC 2 cut(s) 210, 1113
Eco47I GGWCC 6 cut(s) 273, 330, 371, 477, 580, 1261
Eco53kI GAGCTC 2 cut(s) 208, 1111
Eco57I CTGAAG 3 cut(s) 27, 33, 1989
EcoICRI GAGCTC 2 cut(s) 208, 1111
EcoO109I RGGNCCY 2 cut(s) 371, 2228
EcoRII CCWGG 2 cut(s) 392, 1700
EcoT14I CCWWGG 4 cut(s) 99, 777, 783, 1500
EcoT38I GRGCYC 2 cut(s) 210, 1113
ErhI CCWWGG 4 cut(s) 99, 777, 783, 1500
Esp3I CGTCTC 3 cut(s) 299, 992, 1140
FaeI CATG 7 cut(s) 103, 134, 214, 781, 787, 1117, 1268
FalI AAGNNNNNCTT 4 cut(s) 1563, 1595, 1937, 1969
FaqI GGGAC 6 cut(s) 13, 34, 357, 724, 922, 1858
FatI CATG 7 cut(s) 99, 130, 210, 777, 783, 1113, 1264
FauI CCCGC 3 cut(s) 166, 275, 859
FbaI TGATCA 2 cut(s) 1900, 1924
FblI GTMKAC 1 cut(s) 878
FokI GGATG 7 cut(s) 353, 679, 961, 1615, 2013, 2171, 2183
FriOI GRGCYC 2 cut(s) 210, 1113
FspBI CTAG 5 cut(s) 401, 672, 1098, 1548, 1850
GlaI GCGC 2 cut(s) 315, 543
GsaI CCCAGC 1 cut(s) 1566
GsuI CTGGAG 5 cut(s) 39, 45, 51, 557, 1562
HaeII RGCGCY 2 cut(s) 317, 545
HgaI GACGC 6 cut(s) 31, 223, 287, 316, 365, 1157
HhaI GCGC 2 cut(s) 316, 544
Hin1I GRCGYC 3 cut(s) 357, 911, 1149
Hin1II CATG 7 cut(s) 103, 134, 214, 781, 787, 1117, 1268
Hin6I GCGC 2 cut(s) 314, 542
HinP1I GCGC 2 cut(s) 314, 542
HincII GTYRAC 1 cut(s) 879
HindII GTYRAC 1 cut(s) 879
HindIII AAGCTT 1 cut(s) 1065
HinfI GANTC 6 cut(s) 325, 709, 967, 1117, 1627, 1948
HphI GGTGA 3 cut(s) 580, 994, 1934
Hpy166II GTNNAC 4 cut(s) 460, 583, 879, 1219
Hpy188I TCNGA 7 cut(s) 334, 629, 972, 1050, 1389, 1803, 2211
Hpy8I GTNNAC 4 cut(s) 460, 583, 879, 1219
Hpy99I CGWCG 8 cut(s) 359, 857, 880, 883, 916, 919, 922, 1261
HpyAV CCTTC 8 cut(s) 71, 358, 479, 939, 1678, 1996, 2241, 2275
HpyCH4III ACNGT 3 cut(s) 1328, 1861, 1888
HpyCH4IV ACGT 8 cut(s) 237, 456, 561, 585, 861, 911, 1215, 1721
HpyF3I CTNAG 3 cut(s) 1386, 1529, 1632
HpySE526I ACGT 8 cut(s) 237, 456, 561, 585, 861, 911, 1215, 1721
Hsp92I GRCGYC 3 cut(s) 357, 911, 1149
Hsp92II CATG 7 cut(s) 103, 134, 214, 781, 787, 1117, 1268
HspAI GCGC 2 cut(s) 314, 542
Kpn2I TCCGGA 1 cut(s) 663
KroI GCCGGC 2 cut(s) 169, 751
KroNI GCCGGC 2 cut(s) 171, 753
Ksp22I TGATCA 2 cut(s) 1900, 1924
Kzo9I GATC 7 cut(s) 247, 629, 1045, 1371, 1900, 1924, 2122
MaeI CTAG 5 cut(s) 401, 672, 1098, 1548, 1850
MaeII ACGT 8 cut(s) 237, 456, 561, 585, 861, 911, 1215, 1721
MaeIII GTNAC 4 cut(s) 413, 515, 586, 1267
MalI GATC 7 cut(s) 249, 631, 1047, 1373, 1902, 1926, 2124
MbiI CCGCTC 2 cut(s) 930, 1536
MboI GATC 7 cut(s) 247, 629, 1045, 1371, 1900, 1924, 2122
MfeI CAATTG 1 cut(s) 1196
MflI RGATCY 1 cut(s) 629
MhlI GDGCHC 4 cut(s) 210, 1107, 1113, 2260
MlsI TGGCCA 1 cut(s) 782
MluCI AATT 9 cut(s) 196, 446, 720, 793, 1176, 1196, 1304, 1359, 2066
MluNI TGGCCA 1 cut(s) 782
MlyI GAGTC 2 cut(s) 718, 1111
MmeI TCCRAC 2 cut(s) 828, 1834
Mox20I TGGCCA 1 cut(s) 782
MreI CGCCGGCG 2 cut(s) 169, 751
MroI TCCGGA 1 cut(s) 663
MroNI GCCGGC 2 cut(s) 169, 751
MroXI GAANNNNTTC 1 cut(s) 456
MscI TGGCCA 1 cut(s) 782
MseI TTAA 2 cut(s) 321, 792
MslI CAYNNNNRTG 2 cut(s) 776, 782
Msp20I TGGCCA 1 cut(s) 782
MspA1I CMGCKG 3 cut(s) 71, 86, 233
MspCI CTTAAG 1 cut(s) 320
MspR9I CCNGG 5 cut(s) 394, 491, 496, 714, 1702
MunI CAATTG 1 cut(s) 1196
MvaI CCWGG 2 cut(s) 394, 1702
MvnI CGCG 2 cut(s) 298, 354
NaeI GCCGGC 2 cut(s) 171, 753
NciI CCSGG 3 cut(s) 491, 496, 714
NcoI CCATGG 3 cut(s) 99, 777, 783
NdeII GATC 7 cut(s) 247, 629, 1045, 1371, 1900, 1924, 2122
NgoMIV GCCGGC 2 cut(s) 169, 751
NheI GCTAGC 1 cut(s) 400
NlaIII CATG 7 cut(s) 103, 134, 214, 781, 787, 1117, 1268
NlaIV GGNNCC 9 cut(s) 82, 274, 373, 553, 631, 685, 1242, 1431, 2259
NmeAIII GCCGAG 1 cut(s) 1749
NmuCI GTSAC 2 cut(s) 586, 1267
NspI RCATGY 1 cut(s) 134
NspV TTCGAA 1 cut(s) 450
PagI TCATGA 2 cut(s) 210, 1113
PaqCI CACCTGC 1 cut(s) 970
PceI AGGCCT 1 cut(s) 146
PcsI WCGNNNNNNNCGW 7 cut(s) 834, 843, 852, 858, 884, 917, 2148
PdiI GCCGGC 2 cut(s) 171, 753
PdmI GAANNNNTTC 1 cut(s) 456
PfeI GAWTC 4 cut(s) 325, 967, 1627, 1948
PflFI GACNNNGTC 2 cut(s) 25, 913
PfoI TCCNGGA 1 cut(s) 392
PleI GAGTC 2 cut(s) 717, 1111
PpsI GAGTC 2 cut(s) 717, 1111
PpuMI RGGWCCY 1 cut(s) 371
PshBI ATTAAT 1 cut(s) 792
PsiI TTATAA 2 cut(s) 471, 2196
Psp124BI GAGCTC 2 cut(s) 210, 1113
Psp1406I AACGTT 1 cut(s) 456
Psp5II RGGWCCY 1 cut(s) 371
Psp6I CCWGG 2 cut(s) 392, 1700
PspFI CCCAGC 1 cut(s) 1562
PspGI CCWGG 2 cut(s) 392, 1700
PspN4I GGNNCC 9 cut(s) 82, 274, 373, 553, 631, 685, 1242, 1431, 2259
PspPPI RGGWCCY 1 cut(s) 371
PstI CTGCAG 2 cut(s) 1173, 1600
PstNI CAGNNNCTG 3 cut(s) 233, 1859, 1898
PsuI RGATCY 1 cut(s) 629
PsyI GACNNNGTC 2 cut(s) 25, 913
PvuII CAGCTG 2 cut(s) 71, 233
RsaI GTAC 6 cut(s) 845, 1330, 1619, 1670, 2040, 2058
RsaNI GTAC 6 cut(s) 844, 1329, 1618, 1669, 2039, 2057
RseI CAYNNNNRTG 2 cut(s) 776, 782
Rsr2I CGGWCCG 1 cut(s) 330
RsrII CGGWCCG 1 cut(s) 330
SacI GAGCTC 2 cut(s) 210, 1113
SalI GTCGAC 1 cut(s) 877
SaqAI TTAA 2 cut(s) 321, 792
Sau3AI GATC 7 cut(s) 247, 629, 1045, 1371, 1900, 1924, 2122
ScaI AGTACT 2 cut(s) 1670, 2040
SchI GAGTC 2 cut(s) 718, 1111
ScrFI CCNGG 5 cut(s) 394, 491, 496, 714, 1702
SduI GDGCHC 4 cut(s) 210, 1107, 1113, 2260
SfcI CTRYAG 2 cut(s) 1169, 1596
SfuI TTCGAA 1 cut(s) 450
SgrAI CRCCGGYG 3 cut(s) 169, 751, 1237
SgrDI CGTCGACG 1 cut(s) 877
SinI GGWCC 6 cut(s) 273, 330, 371, 477, 580, 1261
SmiMI CAYNNNNRTG 2 cut(s) 776, 782
SmlI CTYRAG 4 cut(s) 320, 1119, 1341, 1839
SmoI CTYRAG 4 cut(s) 320, 1119, 1341, 1839
SpeI ACTAGT 1 cut(s) 671
Sse9I AATT 9 cut(s) 196, 446, 720, 793, 1176, 1196, 1304, 1359, 2066
SseBI AGGCCT 1 cut(s) 146
SspMI CTAG 5 cut(s) 401, 672, 1098, 1548, 1850
SstI GAGCTC 2 cut(s) 210, 1113
StuI AGGCCT 1 cut(s) 146
StyD4I CCNGG 5 cut(s) 392, 489, 494, 712, 1700
StyI CCWWGG 4 cut(s) 99, 777, 783, 1500
TaaI ACNGT 3 cut(s) 1328, 1861, 1888
TaiI ACGT 8 cut(s) 240, 459, 564, 588, 864, 914, 1218, 1724
TaqI TCGA 7 cut(s) 450, 878, 920, 963, 1370, 1490, 2121
TaqII GACCGA 2 cut(s) 318, 1249
TasI AATT 9 cut(s) 196, 446, 720, 793, 1176, 1196, 1304, 1359, 2066
TatI WGTACW 2 cut(s) 1668, 2038
TfiI GAWTC 4 cut(s) 325, 967, 1627, 1948
Tru1I TTAA 2 cut(s) 321, 792
Tru9I TTAA 2 cut(s) 321, 792
TscAI CASTG 4 cut(s) 535, 685, 732, 1524
TseFI GTSAC 2 cut(s) 586, 1267
Tsp45I GTSAC 2 cut(s) 586, 1267
TspDTI ATGAA 4 cut(s) 989, 1298, 2175, 2223
TspGWI ACGGA 3 cut(s) 51, 564, 1406
TspRI CASTG 4 cut(s) 535, 685, 732, 1524
Tth111I GACNNNGTC 2 cut(s) 25, 913
Vha464I CTTAAG 1 cut(s) 320
VpaK11BI GGWCC 6 cut(s) 273, 330, 371, 477, 580, 1261
VspI ATTAAT 1 cut(s) 792
XapI RAATTY 2 cut(s) 446, 1359
XceI RCATGY 1 cut(s) 134
XmiI GTMKAC 1 cut(s) 878
XmnI GAANNNNTTC 1 cut(s) 456
XspI CTAG 5 cut(s) 401, 672, 1098, 1548, 1850
ZraI GACGTC 1 cut(s) 912
ZrmI AGTACT 2 cut(s) 1670, 2040
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.