Rh7CG094200
MYB Family

Trihelix transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0006309
Physical Location & Seq
Reverse (-)
7084327 .. 7089163
4837 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG094200.1

Sequence Viewer

Length: 1986 bp
ATGCAAGGCGGGCAGTCCCATTACGGAGCTTCAGCTCCAGCTGCCGAAGGGGCCGCTGCTACTACTTCCATGGCGGCGGAGGCGGCGGCAGCAGCAGACCAAACGCATGTAGTTGAAGAGGCTTCCCCCATCAGCAGCAGGCCGCCGGCGGGAGGAGCAATCTCCGCCGTCAATTTGGACGAGCTCATGACGCTCTCCGGTGCAGCAGCTGACGTGGCGGCAGATCAAGGCGGTGGCGGCGGTGGAGGGTCCGGCGGCGGGAACAGATGGCCGCGTCAGGAGACGCTGGCTCTTCTTAAGATTCGGTCCGAGATGGATGTGGCCTTCCGCGACGCCACTCTCAAAGGTCCCTTATGGGAAGATGTTTCCAGGAAGCTAGCGGAGCTGGGTTACAAGCGAAACGCGAAAAAGTGCAAAGAGAAATTCGAAAACGTTCACAAGTATTATAAGAGGACCAAAGAAGGCCGGGCCGGGCGGCAAGACGGCAAGAGTTACAAGTTTTTCAGTGAGCTGGAGGCGCTCCACGGCACCACCGCCAACGTGTCGGCTTCTCCGCCGGTCCACGTCACCAACACTCCGGTTTCTATCGGTTTCGGATCCATCAGCAGCCCGATGCCCATTTCGTCTTTCCGGATGACTAGTGGCAGTGGCACCACTTCTACTATTCCGGGTATGACCTCGCAGGGTCCGGGTGCAATTCCGGTAATGCCCTCGTCCCAACCACCACCGCCCCCGGCGACCGCCGCCCCTCCCATGGACATTAATTTCTCTTCCAACAGCTCATCCTCCTCCTCGCACGGCGAGGACGATGACTACGAGGACGACGATGAGGTGGCGGGAGAGCCGTCGACGAACACGAGCCGGAAGCGGAAGAGAGGGACGAGGTCGTCGTCGTCGAGAGAGGGCGGCGGAAGCACTAGAAGGATGATGGAGTTTTTCGAGATTCTGATGAAGCAGGTGATGCAGAAGCAAGAGACGATGCAGCAGAGGTTTCTGGAAGTGATTGAGAAGAGGGAGCAAGATCGGAACATAAGGGAAGAAGCTTGGAAGAGGCAAGAGATGGCCAGGCTGACTAGAGAGCACGAGCTCATGACTCAAGAGCGAGCCATTTCGGCTTCCAGAGACGCCGCCATTATCGCTTTTCTGCAGAAAATTACCGGCCAGACTATCCAATTTCCTCCGCCCCTAAACGTCCACAATGCTCCTCCCCCGCCGGTGCCGCCGTCTGTGTCGTCGGTCCATGTCACGCCAGTATCAGCACCACCGCCACAACCATCAGTTCAACAATTTCATCCGCACACTACTCCAACTGCTCAAGTTTCACGGCATCAAATTCAAACCTCGATCCCTCCTAATCCTCAGACGGAGGTAGTTATGGCTGTGCCGGAGCAACAGGTGGCACCGCCACAGGAGAATGTAGTCGGTAGTGGAGGAGGTTTTGAGGCAACAACCTCATCTTCGAGGTGGCCCAAGGCGGAAGTTCTTGCACTGATAAAGCTGAGGAGCGGACTGGAGACTAGGTATCAAGAGGCTGGGCCGAAAGGCCCACTTTGGGAGGAGATTTCCGCAGGGATGCAGCGAATGGGGTACAAGAGGAATCCCAAGAGGTGCAAAGAGAAATGGGAGAACATCAACAAGTACTTCAAGAAAGTGAAGGAGAGCAACAAGGCCAGGCCTGAAGATGCGAAAACGTGTCCTTATTTTCACGAACTTGATGCACTCTACCGGAAGAGGATACTCGGCGGTGGCCCTAGTGGTGGTGGTGGAAGCAGCAGCTCATTGGGTAATCAGAATATCCAACAACAGCCACAACAAGCACCGGCTACTCAAGGGACAGTGGCAGCTACTGTGCCTGCACCACAAACACAAGGAACAGTAGCAGCTACTGATCAATCAGGAAACAGGAGTGGTGATCATAGCCCAAATCTGCAAAAGAATCTCTTTGGAGATGCACCTGAAGAGGCAGCCAAGAAGAAGACATTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000902 GO:0000904 GO:0001101 GO:0001558 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006275 GO:0006351 GO:0006355 GO:0006725 GO:0006807 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0008156 GO:0008361 GO:0009058 GO:0009059 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009653 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0009991 GO:0010026 GO:0010035 GO:0010090 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010564 GO:0010605 GO:0010629 GO:0010948 GO:0016043 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030154 GO:0030308 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031668 GO:0032502 GO:0032535 GO:0032774 GO:0032875 GO:0032876 GO:0032989 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0040008 GO:0042221 GO:0042631 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045786 GO:0045892 GO:0045926 GO:0045934 GO:0046483 GO:0048468 GO:0048519 GO:0048523 GO:0048580 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051128 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065008 GO:0070887 GO:0071214 GO:0071229 GO:0071462 GO:0071496 GO:0071704 GO:0071840 GO:0080090 GO:0090066 GO:0090304 GO:0090329 GO:0090558 GO:0090626 GO:0097159 GO:0097659 GO:0104004 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1901700 GO:1901701 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000037 GO:2000038 GO:2000104 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-bind_4

Protein Analysis

661

Amino Acids

70.9

Weight (kDa)

9.0

Isoelectric Point (pI)

64.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-bind_4 PF13837 88 - 174 7.5e-24 Myb/SANT-like DNA-binding domain
Myb_DNA-bind_4 PF13837 487 - 574 1.1e-25 Myb/SANT-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 447
AarI CACCTGC 1 cut(s) 946
AasI GACNNNNNNGTC 1 cut(s) 886
Acc36I ACCTGC 1 cut(s) 946
AccB1I GGYRCC 4 cut(s) 527, 650, 1216, 1399
AccBSI CCGCTC 1 cut(s) 1506
AccI GTMKAC 1 cut(s) 848
AccII CGCG 3 cut(s) 274, 330, 404
AccIII TCCGGA 1 cut(s) 630
AclI AACGTT 1 cut(s) 432
AclWI GGATC 3 cut(s) 591, 604, 1339
AcoI YGGCCR 3 cut(s) 269, 1062, 1159
AcsI RAATTY 2 cut(s) 422, 1332
AcuI CTGAAG 3 cut(s) 15, 1698, 1977
AcyI GRCGYC 2 cut(s) 333, 1125
AfaI GTAC 2 cut(s) 1589, 1640
AfiI CCNNNNNNNGG 6 cut(s) 149, 152, 258, 754, 1552, 1757
AflII CTTAAG 1 cut(s) 296
AflIII ACRYGT 2 cut(s) 540, 1691
AgsI TTSAA 4 cut(s) 116, 1283, 1337, 1645
AhlI ACTAGT 1 cut(s) 638
AjiI CACGTC 2 cut(s) 214, 565
AjnI CCWGG 3 cut(s) 368, 1064, 1670
Alw21I GWGCWC 3 cut(s) 186, 1083, 1089
Alw26I GTCTC 4 cut(s) 275, 968, 1116, 1508
AlwI GGATC 3 cut(s) 591, 604, 1339
AlwNI CAGNNNCTG 3 cut(s) 209, 1847, 1886
Aor13HI TCCGGA 1 cut(s) 630
ApoI RAATTY 2 cut(s) 422, 1332
AseI ATTAAT 1 cut(s) 762
Asp700I GAANNNNTTC 1 cut(s) 432
AspLEI GCGC 1 cut(s) 520
AsuC2I CCSGG 5 cut(s) 467, 472, 669, 690, 734
AsuHPI GGTGA 3 cut(s) 559, 970, 1922
AsuII TTCGAA 1 cut(s) 426
AsuNHI GCTAGC 1 cut(s) 376
AvaII GGWCC 7 cut(s) 249, 306, 347, 453, 559, 686, 1237
BaeI ACNNNNGTAYC 2 cut(s) 1236, 1269
BalI TGGCCA 1 cut(s) 1064
BamHI GGATCC 1 cut(s) 596
BanI GGYRCC 4 cut(s) 527, 650, 1216, 1399
BanII GRGCYC 2 cut(s) 186, 1089
BauI CACGAG 2 cut(s) 856, 1082
BbsI GAAGAC 1 cut(s) 1982
Bbv12I GWGCWC 3 cut(s) 186, 1083, 1089
BbvCI CCTCAGC 1 cut(s) 1499
BccI CCATC 7 cut(s) 137, 261, 307, 608, 922, 1054, 1282
BceAI ACGGC 7 cut(s) 152, 499, 541, 814, 829, 1207, 1340
BcgI CGANNNNNNTGC 2 cut(s) 1697, 1731
BciT130I CCWGG 3 cut(s) 370, 1066, 1672
BciVI GTATCC 1 cut(s) 1728
BclI TGATCA 2 cut(s) 1888, 1912
BcnI CCSGG 5 cut(s) 467, 472, 669, 690, 734
BcoDI GTCTC 4 cut(s) 275, 968, 1116, 1508
BcuI ACTAGT 1 cut(s) 638
BfaI CTAG 6 cut(s) 377, 639, 918, 1074, 1518, 1752
BfmI CTRYAG 1 cut(s) 1145
BfoI RGCGCY 1 cut(s) 521
BfrI CTTAAG 1 cut(s) 296
BfuAI ACCTGC 1 cut(s) 946
BfuI GTATCC 1 cut(s) 1728
BglI GCCNNNNNGGC 2 cut(s) 50, 1112
BmcAI AGTACT 1 cut(s) 1640
Bme1390I CCNGG 8 cut(s) 370, 467, 472, 669, 690, 734, 1066, 1672
Bme18I GGWCC 7 cut(s) 249, 306, 347, 453, 559, 686, 1237
BmgBI CACGTC 2 cut(s) 214, 565
BmiI GGNNCC 9 cut(s) 52, 250, 349, 529, 598, 652, 687, 1218, 1401
BmrFI CCNGG 8 cut(s) 370, 467, 472, 669, 690, 734, 1066, 1672
BmsI GCATC 8 cut(s) 603, 951, 969, 1336, 1563, 1672, 1705, 1939
BmtI GCTAGC 1 cut(s) 380
BpiI GAAGAC 1 cut(s) 1982
BpmI CTGGAG 3 cut(s) 21, 533, 1532
Bpu10I CCTNAGC 1 cut(s) 1499
Bpu14I TTCGAA 1 cut(s) 426
BpuEI CTTGAG 3 cut(s) 1080, 1299, 1812
BpuMI CCSGG 5 cut(s) 467, 472, 669, 690, 734
BsaHI GRCGYC 2 cut(s) 333, 1125
BsaJI CCNNGG 5 cut(s) 69, 523, 732, 753, 1470
BsaWI WCCGGW 5 cut(s) 197, 577, 630, 700, 1725
BsaXI ACNNNNNCTCC 4 cut(s) 559, 589, 1505, 1535
Bsc4I CCNNNNNNNGG 6 cut(s) 149, 152, 258, 754, 1552, 1757
Bse118I RCCGGY 5 cut(s) 145, 556, 1157, 1213, 1819
Bse1I ACTGG 2 cut(s) 1250, 1515
BseAI TCCGGA 1 cut(s) 630
BseBI CCWGG 3 cut(s) 370, 1066, 1672
BseDI CCNNGG 5 cut(s) 69, 523, 732, 753, 1470
BseGI GGATG 6 cut(s) 322, 639, 782, 930, 1291, 1578
BseLI CCNNNNNNNGG 6 cut(s) 149, 152, 258, 754, 1552, 1757
BseMII CTCAG 2 cut(s) 1373, 1490
BseNI ACTGG 2 cut(s) 1250, 1515
BseRI GAGGAG 7 cut(s) 168, 778, 781, 1194, 1446, 1516, 1571
BseYI CCCAGC 2 cut(s) 385, 1532
BsgI GTGCAG 2 cut(s) 222, 1839
Bsh1236I CGCG 3 cut(s) 274, 330, 404
Bsh1285I CGRYCG 1 cut(s) 741
BshNI GGYRCC 4 cut(s) 527, 650, 1216, 1399
BsiEI CGRYCG 1 cut(s) 741
BsiHKAI GWGCWC 3 cut(s) 186, 1083, 1089
BslFI GGGAC 4 cut(s) 333, 700, 892, 1846
BslI CCNNNNNNNGG 6 cut(s) 149, 152, 258, 754, 1552, 1757
BsmAI GTCTC 4 cut(s) 275, 968, 1116, 1508
BsmBI CGTCTC 3 cut(s) 275, 968, 1116
BsmFI GGGAC 4 cut(s) 333, 700, 892, 1846
Bsp119I TTCGAA 1 cut(s) 426
Bsp1286I GDGCHC 3 cut(s) 186, 1083, 1089
Bsp13I TCCGGA 1 cut(s) 630
Bsp143I GATC 6 cut(s) 223, 596, 1021, 1344, 1888, 1912
Bsp19I CCATGG 2 cut(s) 69, 753
BspCNI CTCAG 2 cut(s) 1372, 1491
BspEI TCCGGA 1 cut(s) 630
BspFNI CGCG 3 cut(s) 274, 330, 404
BspHI TCATGA 2 cut(s) 186, 1089
BspLI GGNNCC 9 cut(s) 52, 250, 349, 529, 598, 652, 687, 1218, 1401
BspMAI CTGCAG 1 cut(s) 1149
BspMI ACCTGC 1 cut(s) 946
BspOI GCTAGC 1 cut(s) 380
BspPI GGATC 3 cut(s) 591, 604, 1339
BspQI GCTCTTC 1 cut(s) 297
BspT104I TTCGAA 1 cut(s) 426
BspT107I GGYRCC 4 cut(s) 527, 650, 1216, 1399
BspTI CTTAAG 1 cut(s) 296
BsrBI CCGCTC 1 cut(s) 1506
BsrFI RCCGGY 5 cut(s) 145, 556, 1157, 1213, 1819
BsrI ACTGG 2 cut(s) 1250, 1515
BssAI RCCGGY 5 cut(s) 145, 556, 1157, 1213, 1819
BssECI CCNNGG 5 cut(s) 69, 523, 732, 753, 1470
BssMI GATC 6 cut(s) 223, 596, 1021, 1344, 1888, 1912
BssNI GRCGYC 2 cut(s) 333, 1125
BssSI CACGAG 2 cut(s) 856, 1082
BssT1I CCWWGG 3 cut(s) 69, 753, 1470
Bst2BI CACGAG 2 cut(s) 856, 1082
Bst2UI CCWGG 3 cut(s) 370, 1066, 1672
Bst4CI ACNGT 3 cut(s) 1837, 1849, 1876
Bst6I CTCTTC 8 cut(s) 111, 297, 775, 866, 1004, 1043, 1724, 1953
BstACI GRCGYC 2 cut(s) 333, 1125
BstAFI CTTAAG 1 cut(s) 296
BstAPI GCANNNNNTGC 1 cut(s) 961
BstBI TTCGAA 1 cut(s) 426
BstC8I GCNNGC 7 cut(s) 11, 140, 147, 288, 378, 1104, 1854
BstDEI CTNAG 2 cut(s) 1359, 1499
BstDSI CCRYGG 3 cut(s) 69, 523, 753
BstF5I GGATG 6 cut(s) 322, 639, 782, 930, 1291, 1578
BstFNI CGCG 3 cut(s) 274, 330, 404
BstH2I RGCGCY 1 cut(s) 521
BstHHI GCGC 1 cut(s) 520
BstKTI GATC 6 cut(s) 226, 599, 1024, 1347, 1891, 1915
BstMAI GTCTC 4 cut(s) 275, 968, 1116, 1508
BstMBI GATC 6 cut(s) 223, 596, 1021, 1344, 1888, 1912
BstMCI CGRYCG 1 cut(s) 741
BstNI CCWGG 3 cut(s) 370, 1066, 1672
BstNSI RCATGY 1 cut(s) 110
BstSCI CCNGG 8 cut(s) 368, 465, 470, 667, 688, 732, 1064, 1670
BstSFI CTRYAG 1 cut(s) 1145
BstUI CGCG 3 cut(s) 274, 330, 404
BstV2I GAAGAC 1 cut(s) 1982
BstX2I RGATCY 1 cut(s) 596
BstYI RGATCY 1 cut(s) 596
BsuI GTATCC 1 cut(s) 1728
BtgI CCRYGG 3 cut(s) 69, 523, 753
BtrI CACGTC 2 cut(s) 214, 565
BtsCI GGATG 6 cut(s) 322, 639, 782, 930, 1291, 1578
BtsI GCAGTG 1 cut(s) 652
BtsIMutI CAGTG 4 cut(s) 511, 652, 1487, 1842
BveI ACCTGC 1 cut(s) 946
Cac8I GCNNGC 7 cut(s) 11, 140, 147, 288, 378, 1104, 1854
CaiI CAGNNNCTG 3 cut(s) 209, 1847, 1886
CciI TCATGA 2 cut(s) 186, 1089
CfoI GCGC 1 cut(s) 520
Cfr10I RCCGGY 5 cut(s) 145, 556, 1157, 1213, 1819
CpoI CGGWCCG 1 cut(s) 306
CseI GACGC 5 cut(s) 199, 263, 292, 341, 1133
Csp6I GTAC 2 cut(s) 1588, 1639
CspI CGGWCCG 1 cut(s) 306
CviAII CATG 6 cut(s) 70, 107, 187, 754, 1090, 1241
CviQI GTAC 2 cut(s) 1588, 1639
DdeI CTNAG 2 cut(s) 1359, 1499
DpnI GATC 6 cut(s) 225, 598, 1023, 1346, 1890, 1914
DpnII GATC 6 cut(s) 223, 596, 1021, 1344, 1888, 1912
DrdI GACNNNNNNGTC 1 cut(s) 886
DseDI GACNNNNNNGTC 1 cut(s) 886
EaeI YGGCCR 3 cut(s) 269, 1062, 1159
Eam1104I CTCTTC 8 cut(s) 111, 297, 775, 866, 1004, 1043, 1724, 1953
EarI CTCTTC 8 cut(s) 111, 297, 775, 866, 1004, 1043, 1724, 1953
EciI GGCGGA 6 cut(s) 92, 154, 543, 924, 1170, 1490
Ecl136II GAGCTC 2 cut(s) 184, 1087
Eco130I CCWWGG 3 cut(s) 69, 753, 1470
Eco147I AGGCCT 1 cut(s) 1675
Eco24I GRGCYC 2 cut(s) 186, 1089
Eco47I GGWCC 7 cut(s) 249, 306, 347, 453, 559, 686, 1237
Eco53kI GAGCTC 2 cut(s) 184, 1087
Eco57I CTGAAG 3 cut(s) 15, 1698, 1977
EcoICRI GAGCTC 2 cut(s) 184, 1087
EcoO109I RGGNCCY 1 cut(s) 347
EcoRII CCWGG 3 cut(s) 368, 1064, 1670
EcoT14I CCWWGG 3 cut(s) 69, 753, 1470
EcoT38I GRGCYC 2 cut(s) 186, 1089
ErhI CCWWGG 3 cut(s) 69, 753, 1470
Esp3I CGTCTC 3 cut(s) 275, 968, 1116
FaeI CATG 6 cut(s) 73, 110, 190, 757, 1093, 1244
FalI AAGNNNNNCTT 4 cut(s) 1533, 1565, 1925, 1957
FaqI GGGAC 4 cut(s) 333, 700, 892, 1846
FatI CATG 6 cut(s) 69, 106, 186, 753, 1089, 1240
FauI CCCGC 5 cut(s) 2, 142, 251, 829, 1218
FbaI TGATCA 2 cut(s) 1888, 1912
FblI GTMKAC 1 cut(s) 848
FokI GGATG 6 cut(s) 329, 646, 769, 937, 1278, 1585
FriOI GRGCYC 2 cut(s) 186, 1089
FspBI CTAG 6 cut(s) 377, 639, 918, 1074, 1518, 1752
GlaI GCGC 1 cut(s) 519
GsaI CCCAGC 2 cut(s) 389, 1536
GsuI CTGGAG 3 cut(s) 21, 533, 1532
HaeII RGCGCY 1 cut(s) 521
HgaI GACGC 5 cut(s) 199, 263, 292, 341, 1133
HhaI GCGC 1 cut(s) 520
Hin1I GRCGYC 2 cut(s) 333, 1125
Hin1II CATG 6 cut(s) 73, 110, 190, 757, 1093, 1244
Hin6I GCGC 1 cut(s) 518
HinP1I GCGC 1 cut(s) 518
HincII GTYRAC 1 cut(s) 849
HindII GTYRAC 1 cut(s) 849
HindIII AAGCTT 1 cut(s) 1041
HinfI GANTC 5 cut(s) 301, 943, 1093, 1597, 1936
HphI GGTGA 3 cut(s) 559, 970, 1922
Hpy166II GTNNAC 4 cut(s) 436, 562, 849, 1195
Hpy188I TCNGA 6 cut(s) 310, 596, 948, 1026, 1362, 1791
Hpy8I GTNNAC 4 cut(s) 436, 562, 849, 1195
Hpy99I CGWCG 8 cut(s) 335, 827, 850, 853, 892, 895, 898, 1237
HpyAV CCTTC 5 cut(s) 41, 334, 455, 915, 1648
HpyCH4III ACNGT 3 cut(s) 1837, 1849, 1876
HpyCH4IV ACGT 6 cut(s) 213, 432, 540, 564, 1191, 1691
HpyF3I CTNAG 2 cut(s) 1359, 1499
HpySE526I ACGT 6 cut(s) 213, 432, 540, 564, 1191, 1691
Hsp92I GRCGYC 2 cut(s) 333, 1125
Hsp92II CATG 6 cut(s) 73, 110, 190, 757, 1093, 1244
HspAI GCGC 1 cut(s) 518
Kpn2I TCCGGA 1 cut(s) 630
KroI GCCGGC 1 cut(s) 145
KroNI GCCGGC 1 cut(s) 147
Ksp22I TGATCA 2 cut(s) 1888, 1912
Kzo9I GATC 6 cut(s) 223, 596, 1021, 1344, 1888, 1912
LguI GCTCTTC 1 cut(s) 297
LmnI GCTCC 9 cut(s) 26, 40, 155, 382, 525, 1015, 1207, 1387, 1503
LweI GCATC 8 cut(s) 603, 951, 969, 1336, 1563, 1672, 1705, 1939
MaeI CTAG 6 cut(s) 377, 639, 918, 1074, 1518, 1752
MaeII ACGT 6 cut(s) 213, 432, 540, 564, 1191, 1691
MaeIII GTNAC 4 cut(s) 389, 491, 565, 1243
MalI GATC 6 cut(s) 225, 598, 1023, 1346, 1890, 1914
MbiI CCGCTC 1 cut(s) 1506
MboI GATC 6 cut(s) 223, 596, 1021, 1344, 1888, 1912
MflI RGATCY 1 cut(s) 596
MhlI GDGCHC 3 cut(s) 186, 1083, 1089
MlsI TGGCCA 1 cut(s) 1064
MluCI AATT 8 cut(s) 172, 422, 696, 763, 1152, 1172, 1286, 1332
MluNI TGGCCA 1 cut(s) 1064
MlyI GAGTC 1 cut(s) 1087
MmeI TCCRAC 3 cut(s) 798, 1331, 1822
Mox20I TGGCCA 1 cut(s) 1064
MreI CGCCGGCG 1 cut(s) 145
MroI TCCGGA 1 cut(s) 630
MroNI GCCGGC 1 cut(s) 145
MroXI GAANNNNTTC 1 cut(s) 432
MscI TGGCCA 1 cut(s) 1064
MseI TTAA 2 cut(s) 297, 762
Msp20I TGGCCA 1 cut(s) 1064
MspA1I CMGCKG 3 cut(s) 41, 56, 209
MspCI CTTAAG 1 cut(s) 296
MspR9I CCNGG 8 cut(s) 370, 467, 472, 669, 690, 734, 1066, 1672
MvaI CCWGG 3 cut(s) 370, 1066, 1672
MvnI CGCG 3 cut(s) 274, 330, 404
NaeI GCCGGC 1 cut(s) 147
NciI CCSGG 5 cut(s) 467, 472, 669, 690, 734
NcoI CCATGG 2 cut(s) 69, 753
NdeII GATC 6 cut(s) 223, 596, 1021, 1344, 1888, 1912
NgoMIV GCCGGC 1 cut(s) 145
NheI GCTAGC 1 cut(s) 376
NlaIII CATG 6 cut(s) 73, 110, 190, 757, 1093, 1244
NlaIV GGNNCC 9 cut(s) 52, 250, 349, 529, 598, 652, 687, 1218, 1401
NmeAIII GCCGAG 1 cut(s) 1719
NmuCI GTSAC 2 cut(s) 565, 1243
NspI RCATGY 1 cut(s) 110
NspV TTCGAA 1 cut(s) 426
PagI TCATGA 2 cut(s) 186, 1089
PaqCI CACCTGC 1 cut(s) 946
PceI AGGCCT 1 cut(s) 1675
PciSI GCTCTTC 1 cut(s) 297
PcsI WCGNNNNNNNCGW 6 cut(s) 804, 813, 822, 854, 887, 893
PdiI GCCGGC 1 cut(s) 147
PdmI GAANNNNTTC 1 cut(s) 432
PfeI GAWTC 4 cut(s) 301, 943, 1597, 1936
PflFI GACNNNGTC 1 cut(s) 883
PfoI TCCNGGA 1 cut(s) 368
PleI GAGTC 1 cut(s) 1087
PpsI GAGTC 1 cut(s) 1087
PpuMI RGGWCCY 1 cut(s) 347
PshBI ATTAAT 1 cut(s) 762
PsiI TTATAA 1 cut(s) 447
Psp124BI GAGCTC 2 cut(s) 186, 1089
Psp1406I AACGTT 1 cut(s) 432
Psp5II RGGWCCY 1 cut(s) 347
Psp6I CCWGG 3 cut(s) 368, 1064, 1670
PspFI CCCAGC 2 cut(s) 385, 1532
PspGI CCWGG 3 cut(s) 368, 1064, 1670
PspN4I GGNNCC 9 cut(s) 52, 250, 349, 529, 598, 652, 687, 1218, 1401
PspPPI RGGWCCY 1 cut(s) 347
PstI CTGCAG 1 cut(s) 1149
PstNI CAGNNNCTG 3 cut(s) 209, 1847, 1886
PsuI RGATCY 1 cut(s) 596
PsyI GACNNNGTC 1 cut(s) 883
PvuII CAGCTG 2 cut(s) 41, 209
RsaI GTAC 2 cut(s) 1589, 1640
RsaNI GTAC 2 cut(s) 1588, 1639
Rsr2I CGGWCCG 1 cut(s) 306
RsrII CGGWCCG 1 cut(s) 306
SacI GAGCTC 2 cut(s) 186, 1089
SalI GTCGAC 1 cut(s) 847
SapI GCTCTTC 1 cut(s) 297
SaqAI TTAA 2 cut(s) 297, 762
Sau3AI GATC 6 cut(s) 223, 596, 1021, 1344, 1888, 1912
ScaI AGTACT 1 cut(s) 1640
SchI GAGTC 1 cut(s) 1087
ScrFI CCNGG 8 cut(s) 370, 467, 472, 669, 690, 734, 1066, 1672
SduI GDGCHC 3 cut(s) 186, 1083, 1089
SfaNI GCATC 8 cut(s) 603, 951, 969, 1336, 1563, 1672, 1705, 1939
SfcI CTRYAG 1 cut(s) 1145
SfuI TTCGAA 1 cut(s) 426
SgrAI CRCCGGYG 2 cut(s) 145, 1213
SgrDI CGTCGACG 1 cut(s) 847
SinI GGWCC 7 cut(s) 249, 306, 347, 453, 559, 686, 1237
SmlI CTYRAG 4 cut(s) 296, 1095, 1314, 1827
SmoI CTYRAG 4 cut(s) 296, 1095, 1314, 1827
SpeI ACTAGT 1 cut(s) 638
Sse9I AATT 8 cut(s) 172, 422, 696, 763, 1152, 1172, 1286, 1332
SseBI AGGCCT 1 cut(s) 1675
SspMI CTAG 6 cut(s) 377, 639, 918, 1074, 1518, 1752
SstI GAGCTC 2 cut(s) 186, 1089
StuI AGGCCT 1 cut(s) 1675
StyD4I CCNGG 8 cut(s) 368, 465, 470, 667, 688, 732, 1064, 1670
StyI CCWWGG 3 cut(s) 69, 753, 1470
TaaI ACNGT 3 cut(s) 1837, 1849, 1876
TaiI ACGT 6 cut(s) 216, 435, 543, 567, 1194, 1694
TaqI TCGA 6 cut(s) 426, 848, 896, 939, 1343, 1460
TaqII GACCGA 2 cut(s) 294, 1225
TasI AATT 8 cut(s) 172, 422, 696, 763, 1152, 1172, 1286, 1332
TatI WGTACW 1 cut(s) 1638
TfiI GAWTC 4 cut(s) 301, 943, 1597, 1936
Tru1I TTAA 2 cut(s) 297, 762
Tru9I TTAA 2 cut(s) 297, 762
TscAI CASTG 4 cut(s) 511, 652, 1494, 1842
TseFI GTSAC 2 cut(s) 565, 1243
Tsp45I GTSAC 2 cut(s) 565, 1243
TspDTI ATGAA 2 cut(s) 965, 1280
TspGWI ACGGA 2 cut(s) 39, 1379
TspRI CASTG 4 cut(s) 511, 652, 1494, 1842
Tth111I GACNNNGTC 1 cut(s) 883
Vha464I CTTAAG 1 cut(s) 296
VpaK11BI GGWCC 7 cut(s) 249, 306, 347, 453, 559, 686, 1237
VspI ATTAAT 1 cut(s) 762
XapI RAATTY 2 cut(s) 422, 1332
XceI RCATGY 1 cut(s) 110
XmiI GTMKAC 1 cut(s) 848
XmnI GAANNNNTTC 1 cut(s) 432
XspI CTAG 6 cut(s) 377, 639, 918, 1074, 1518, 1752
ZrmI AGTACT 1 cut(s) 1640
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.