Rw7G008020
MYB Family

Trihelix transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0006309
Physical Location & Seq
Reverse (-)
7311598 .. 7314546
2949 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G008020.1

Sequence Viewer

Length: 1842 bp
ATGCAAGGCGGGCAGTCCCATTACGGAGCTTCAGCTCCAGCTCCAGCTCCAGCTGCCGAAGGGGCCGCTGCTACTACTTCCATGGCGGCGGAGGCAGCAGCAGCAGACCAGGCGCATGTAGTTGAAGAGGCTTCCCCCATCAGCAGCAGGCCGCCGGCGGGAGGAGCAATCTCCGCCGTCAATTTGGACGAGCTCATGACGCTCTCCGGTGCAGCAGCTGACATGGCCGCGTCAGGAGACGCTGCGCTTCTTAAGATTCGGTCCGAGATGGATGTGGCCTTCCGCGACGCCACTCTCAAAGGTCCCTTATGGGAAGATGTTTCCAGGAAGCTAGCGGAGCTGGGTTACAAGCGAAATGCGAAGAAGTGCAAAGAGAAATTCGAAAACGTTCACAAGTATTATAAGAGGACCAAAGAAGGCCGGGCCGGGCGGCAAGACGGCAAGAGTTACAAATTTTTCAGTGAGCTGGAGGCGCTCCACGGCACCACCGCCAACGTGTCGGCTTCTCCGCCGGTCCACGTCACCAACACTCCGGTTTCTATCGGTTTCGGATCCATCAGCAGCCCGATGCCCATTTCGTCCTTCCGGATGACTAGTGGCAGGTGCGGGTGCAATTCCAGTAATGCCCCCGTCCCAACCACCACCGCCCCGGCGACCGCCGCCCCTCCCATGGACATTAATTTCTCTTCCAACAGCTCCTCCTCCTCCTCGCACGATGAGTACGAGGACGACGATGAGGTGGCGGGAGAGCCGTCGACGAACACGAGCCGGAAGCGGAAGAGAGGTTTAGGGACGAGGTCGTCGTCGAGAGAGGGCGGCGGAAGCACGAGAAGGATGATGGAGTTTTTCGAGATTCTGATGAAGCAGGTGATGCAGAAGCAGGAGACGATGCAGCAGAGGTTTCTGGAGGTGATTGAGAAGAGGGAGCAAGATCGGAACATAAGGGAAGAAGCTTGGAAGAGGCAAGAGATGGCCAGGCTGACTAGAGAGCACGAGCTCATGACTCAAGAGCGAGCCATTTCGAAAATTACCGGCCAGACTATCCAATTGCCTCCGCCCCTAAACGTCCACAATGCTCCTCCCCCGCCGGTGCCGCCGTCTGTGTCGTCGGTCCATGTCACGCCAGTATCAGCACCACCGCCGCAACCATCAGCATCAGTTCAACAATTTCATCCGCACACTACTCCAACTGCTCAAGTTTCACGGCATCAAATTCAAACTTCGATCCCTCCTCATCCTCAGACGGAGGTAGTTATGGCTGTGCCGGAGCAACAGGTGGCACCGCCACAGGAGAATGTAGTCGGTAGTGGAGGAGGTTTTGAGGCAACAACCTCATCTTCGAGGTGGCCCAAGGCGGAAGTTCTTGCACTGATAAAGCTGAGGAGCGGACTGGAGACTAGGTATCAAGAGGCTGGGCCGAAAGGCCCACTTTGGGAGGAGATTTCCGCAGGGATGCAGCGAATGGGGTACAAGAGGAATCCCAAGAGGTGCAAAGAGAAATGGGAGAACATCAACAAGTACTTCAAGAAAGTGAAGGAGAGCAACAAGGCCAGGCCTGAAGATGCGAAAACGTGTCCTTATTTTCACGAACTTGATGCACTCTACCGGAAGAGGATACTTGGCGGTGGAAGCAGCAGCTCATTGGGTAATCAGAATATCCAACAACAGCCACCGGCTACTCAAGGGACAGTAGCAGCAGCTACTGTGCCTGCACCACAAACACAAGGAACAGTAGCAGCTACTGATCAATCAGGAAACAAGAGTGGCGATCGTAGCCCAAATCTGCAAAAGAATCTCTTTGGAGATGCACCCGAAGAGGCAGCCAAGAAGAAGACATTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000902 GO:0000904 GO:0001101 GO:0001558 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006275 GO:0006351 GO:0006355 GO:0006725 GO:0006807 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0008156 GO:0008361 GO:0009058 GO:0009059 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009653 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0009991 GO:0010026 GO:0010035 GO:0010090 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010564 GO:0010605 GO:0010629 GO:0010948 GO:0016043 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030154 GO:0030308 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031668 GO:0032502 GO:0032535 GO:0032774 GO:0032875 GO:0032876 GO:0032989 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0040008 GO:0042221 GO:0042631 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045786 GO:0045892 GO:0045926 GO:0045934 GO:0046483 GO:0048468 GO:0048519 GO:0048523 GO:0048580 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051128 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065008 GO:0070887 GO:0071214 GO:0071229 GO:0071462 GO:0071496 GO:0071704 GO:0071840 GO:0080090 GO:0090066 GO:0090304 GO:0090329 GO:0090558 GO:0090626 GO:0097159 GO:0097659 GO:0104004 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1901700 GO:1901701 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000037 GO:2000038 GO:2000104 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-bind_4

Protein Analysis

613

Amino Acids

66.23

Weight (kDa)

9.14

Isoelectric Point (pI)

63.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-bind_4 PF13837 82 - 159 1.7e-19 Myb/SANT-like DNA-binding domain
Myb_DNA-bind_4 PF13837 447 - 534 9.9e-26 Myb/SANT-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 402
AarI CACCTGC 2 cut(s) 591, 856
AasI GACNNNNNNGTC 1 cut(s) 799
Acc36I ACCTGC 2 cut(s) 591, 856
AccB1I GGYRCC 3 cut(s) 482, 1090, 1279
AccBSI CCGCTC 1 cut(s) 1386
AccI GTMKAC 1 cut(s) 755
AccII CGCG 2 cut(s) 230, 285
AccIII TCCGGA 1 cut(s) 585
AclI AACGTT 1 cut(s) 387
AclWI GGATC 3 cut(s) 546, 559, 1219
AcoI YGGCCR 3 cut(s) 225, 972, 1033
AcsI RAATTY 3 cut(s) 377, 452, 1212
AcuI CTGAAG 2 cut(s) 15, 1578
AcyI GRCGYC 1 cut(s) 288
AfaI GTAC 3 cut(s) 722, 1469, 1520
AfiI CCNNNNNNNGG 4 cut(s) 158, 161, 670, 1432
AflII CTTAAG 1 cut(s) 251
AflIII ACRYGT 2 cut(s) 495, 1571
AgsI TTSAA 4 cut(s) 125, 1163, 1217, 1525
AhlI ACTAGT 1 cut(s) 593
AjiI CACGTC 1 cut(s) 520
AjnI CCWGG 4 cut(s) 108, 323, 974, 1550
Alw21I GWGCWC 3 cut(s) 195, 993, 999
Alw26I GTCTC 3 cut(s) 231, 878, 1388
AlwI GGATC 3 cut(s) 546, 559, 1219
AlwNI CAGNNNCTG 3 cut(s) 218, 1703, 1742
Aor13HI TCCGGA 1 cut(s) 585
ApoI RAATTY 3 cut(s) 377, 452, 1212
AseI ATTAAT 1 cut(s) 678
Asp700I GAANNNNTTC 1 cut(s) 387
AspLEI GCGC 3 cut(s) 115, 247, 475
AsuC2I CCSGG 3 cut(s) 422, 427, 650
AsuHPI GGTGA 3 cut(s) 514, 880, 922
AsuII TTCGAA 2 cut(s) 381, 1022
AsuNHI GCTAGC 1 cut(s) 331
AvaII GGWCC 5 cut(s) 261, 302, 408, 514, 1111
BaeI ACNNNNGTAYC 2 cut(s) 1110, 1143
BalI TGGCCA 1 cut(s) 974
BamHI GGATCC 1 cut(s) 551
BanI GGYRCC 3 cut(s) 482, 1090, 1279
BanII GRGCYC 2 cut(s) 195, 999
BauI CACGAG 3 cut(s) 763, 826, 992
BbsI GAAGAC 1 cut(s) 1838
Bbv12I GWGCWC 3 cut(s) 195, 993, 999
BbvCI CCTCAGC 1 cut(s) 1379
BccI CCATC 6 cut(s) 146, 262, 563, 832, 964, 1156
BceAI ACGGC 6 cut(s) 161, 454, 496, 736, 1081, 1220
BcgI CGANNNNNNTGC 2 cut(s) 1577, 1611
BciT130I CCWGG 4 cut(s) 110, 325, 976, 1552
BciVI GTATCC 1 cut(s) 1608
BclI TGATCA 1 cut(s) 1744
BcnI CCSGG 3 cut(s) 422, 427, 650
BcoDI GTCTC 3 cut(s) 231, 878, 1388
BcuI ACTAGT 1 cut(s) 593
BfaI CTAG 4 cut(s) 332, 594, 984, 1398
BfoI RGCGCY 1 cut(s) 476
BfrI CTTAAG 1 cut(s) 251
BfuAI ACCTGC 2 cut(s) 591, 856
BfuI GTATCC 1 cut(s) 1608
BglI GCCNNNNNGGC 1 cut(s) 62
BmcAI AGTACT 1 cut(s) 1520
Bme1390I CCNGG 7 cut(s) 110, 325, 422, 427, 650, 976, 1552
Bme18I GGWCC 5 cut(s) 261, 302, 408, 514, 1111
BmgBI CACGTC 1 cut(s) 520
BmiI GGNNCC 6 cut(s) 64, 304, 484, 553, 1092, 1281
BmrFI CCNGG 7 cut(s) 110, 325, 422, 427, 650, 976, 1552
BmsI GCATC 9 cut(s) 558, 861, 879, 1163, 1216, 1443, 1552, 1585, 1795
BmtI GCTAGC 1 cut(s) 335
BpiI GAAGAC 1 cut(s) 1838
BpmI CTGGAG 6 cut(s) 21, 27, 33, 488, 926, 1412
Bpu10I CCTNAGC 1 cut(s) 1379
Bpu14I TTCGAA 2 cut(s) 381, 1022
BpuEI CTTGAG 3 cut(s) 990, 1179, 1665
BpuMI CCSGG 3 cut(s) 422, 427, 650
BsaHI GRCGYC 1 cut(s) 288
BsaJI CCNNGG 5 cut(s) 81, 478, 648, 669, 1350
BsaWI WCCGGW 4 cut(s) 206, 532, 585, 1605
BsaXI ACNNNNNCTCC 6 cut(s) 514, 544, 683, 713, 1385, 1415
Bsc4I CCNNNNNNNGG 4 cut(s) 158, 161, 670, 1432
Bse118I RCCGGY 5 cut(s) 154, 511, 1031, 1087, 1672
Bse1I ACTGG 3 cut(s) 618, 1124, 1395
BseAI TCCGGA 1 cut(s) 585
BseBI CCWGG 4 cut(s) 110, 325, 976, 1552
BseDI CCNNGG 5 cut(s) 81, 478, 648, 669, 1350
BseGI GGATG 6 cut(s) 277, 594, 840, 1171, 1234, 1458
BseLI CCNNNNNNNGG 4 cut(s) 158, 161, 670, 1432
BseMII CTCAG 2 cut(s) 1253, 1370
BseNI ACTGG 3 cut(s) 618, 1124, 1395
BseYI CCCAGC 2 cut(s) 340, 1412
BsgI GTGCAG 2 cut(s) 231, 1695
Bsh1236I CGCG 2 cut(s) 230, 285
Bsh1285I CGRYCG 2 cut(s) 657, 1771
BshNI GGYRCC 3 cut(s) 482, 1090, 1279
BsiEI CGRYCG 2 cut(s) 657, 1771
BsiHKAI GWGCWC 3 cut(s) 195, 993, 999
BslFI GGGAC 4 cut(s) 288, 617, 805, 1699
BslI CCNNNNNNNGG 4 cut(s) 158, 161, 670, 1432
BsmAI GTCTC 3 cut(s) 231, 878, 1388
BsmBI CGTCTC 2 cut(s) 231, 878
BsmFI GGGAC 4 cut(s) 288, 617, 805, 1699
Bsp119I TTCGAA 2 cut(s) 381, 1022
Bsp1286I GDGCHC 3 cut(s) 195, 993, 999
Bsp13I TCCGGA 1 cut(s) 585
Bsp143I GATC 5 cut(s) 551, 931, 1224, 1744, 1768
Bsp19I CCATGG 2 cut(s) 81, 669
BspCNI CTCAG 2 cut(s) 1252, 1371
BspEI TCCGGA 1 cut(s) 585
BspFNI CGCG 2 cut(s) 230, 285
BspHI TCATGA 2 cut(s) 195, 999
BspLI GGNNCC 6 cut(s) 64, 304, 484, 553, 1092, 1281
BspMI ACCTGC 2 cut(s) 591, 856
BspOI GCTAGC 1 cut(s) 335
BspPI GGATC 3 cut(s) 546, 559, 1219
BspT104I TTCGAA 2 cut(s) 381, 1022
BspT107I GGYRCC 3 cut(s) 482, 1090, 1279
BspTI CTTAAG 1 cut(s) 251
BsrBI CCGCTC 1 cut(s) 1386
BsrFI RCCGGY 5 cut(s) 154, 511, 1031, 1087, 1672
BsrI ACTGG 3 cut(s) 618, 1124, 1395
BssAI RCCGGY 5 cut(s) 154, 511, 1031, 1087, 1672
BssECI CCNNGG 5 cut(s) 81, 478, 648, 669, 1350
BssMI GATC 5 cut(s) 551, 931, 1224, 1744, 1768
BssNI GRCGYC 1 cut(s) 288
BssSI CACGAG 3 cut(s) 763, 826, 992
BssT1I CCWWGG 3 cut(s) 81, 669, 1350
Bst2BI CACGAG 3 cut(s) 763, 826, 992
Bst2UI CCWGG 4 cut(s) 110, 325, 976, 1552
Bst4CI ACNGT 3 cut(s) 1690, 1705, 1732
Bst6I CTCTTC 7 cut(s) 120, 691, 773, 914, 953, 1604, 1809
BstACI GRCGYC 1 cut(s) 288
BstAFI CTTAAG 1 cut(s) 251
BstAPI GCANNNNNTGC 1 cut(s) 871
BstBI TTCGAA 2 cut(s) 381, 1022
BstC8I GCNNGC 6 cut(s) 11, 149, 156, 333, 1014, 1710
BstDEI CTNAG 2 cut(s) 1239, 1379
BstDSI CCRYGG 3 cut(s) 81, 478, 669
BstF5I GGATG 6 cut(s) 277, 594, 840, 1171, 1234, 1458
BstFNI CGCG 2 cut(s) 230, 285
BstH2I RGCGCY 1 cut(s) 476
BstHHI GCGC 3 cut(s) 115, 247, 475
BstKTI GATC 5 cut(s) 554, 934, 1227, 1747, 1771
BstMAI GTCTC 3 cut(s) 231, 878, 1388
BstMBI GATC 5 cut(s) 551, 931, 1224, 1744, 1768
BstMCI CGRYCG 2 cut(s) 657, 1771
BstNI CCWGG 4 cut(s) 110, 325, 976, 1552
BstNSI RCATGY 1 cut(s) 119
BstSCI CCNGG 7 cut(s) 108, 323, 420, 425, 648, 974, 1550
BstUI CGCG 2 cut(s) 230, 285
BstV2I GAAGAC 1 cut(s) 1838
BstX2I RGATCY 1 cut(s) 551
BstYI RGATCY 1 cut(s) 551
BsuI GTATCC 1 cut(s) 1608
BtgI CCRYGG 3 cut(s) 81, 478, 669
BtrI CACGTC 1 cut(s) 520
BtsCI GGATG 6 cut(s) 277, 594, 840, 1171, 1234, 1458
BtsIMutI CAGTG 2 cut(s) 466, 1367
BveI ACCTGC 2 cut(s) 591, 856
Cac8I GCNNGC 6 cut(s) 11, 149, 156, 333, 1014, 1710
CaiI CAGNNNCTG 3 cut(s) 218, 1703, 1742
CciI TCATGA 2 cut(s) 195, 999
CfoI GCGC 3 cut(s) 115, 247, 475
Cfr10I RCCGGY 5 cut(s) 154, 511, 1031, 1087, 1672
CpoI CGGWCCG 1 cut(s) 261
CseI GACGC 4 cut(s) 208, 219, 248, 296
Csp6I GTAC 3 cut(s) 721, 1468, 1519
CspI CGGWCCG 1 cut(s) 261
CviAII CATG 7 cut(s) 82, 116, 196, 223, 670, 1000, 1115
CviQI GTAC 3 cut(s) 721, 1468, 1519
DdeI CTNAG 2 cut(s) 1239, 1379
DpnI GATC 5 cut(s) 553, 933, 1226, 1746, 1770
DpnII GATC 5 cut(s) 551, 931, 1224, 1744, 1768
DrdI GACNNNNNNGTC 1 cut(s) 799
DseDI GACNNNNNNGTC 1 cut(s) 799
EaeI YGGCCR 3 cut(s) 225, 972, 1033
Eam1104I CTCTTC 7 cut(s) 120, 691, 773, 914, 953, 1604, 1809
EarI CTCTTC 7 cut(s) 120, 691, 773, 914, 953, 1604, 1809
EciI GGCGGA 6 cut(s) 104, 163, 498, 834, 1044, 1370
Ecl136II GAGCTC 2 cut(s) 193, 997
Eco130I CCWWGG 3 cut(s) 81, 669, 1350
Eco147I AGGCCT 1 cut(s) 1555
Eco24I GRGCYC 2 cut(s) 195, 999
Eco47I GGWCC 5 cut(s) 261, 302, 408, 514, 1111
Eco53kI GAGCTC 2 cut(s) 193, 997
Eco57I CTGAAG 2 cut(s) 15, 1578
EcoICRI GAGCTC 2 cut(s) 193, 997
EcoO109I RGGNCCY 1 cut(s) 302
EcoRII CCWGG 4 cut(s) 108, 323, 974, 1550
EcoT14I CCWWGG 3 cut(s) 81, 669, 1350
EcoT38I GRGCYC 2 cut(s) 195, 999
ErhI CCWWGG 3 cut(s) 81, 669, 1350
Esp3I CGTCTC 2 cut(s) 231, 878
FaeI CATG 7 cut(s) 85, 119, 199, 226, 673, 1003, 1118
FalI AAGNNNNNCTT 4 cut(s) 1413, 1445, 1781, 1813
FaqI GGGAC 4 cut(s) 288, 617, 805, 1699
FatI CATG 7 cut(s) 81, 115, 195, 222, 669, 999, 1114
FauI CCCGC 5 cut(s) 2, 151, 599, 736, 1092
FbaI TGATCA 1 cut(s) 1744
FblI GTMKAC 1 cut(s) 755
FokI GGATG 6 cut(s) 284, 601, 847, 1158, 1221, 1465
FriOI GRGCYC 2 cut(s) 195, 999
FspBI CTAG 4 cut(s) 332, 594, 984, 1398
GlaI GCGC 3 cut(s) 114, 246, 474
GsaI CCCAGC 2 cut(s) 344, 1416
GsuI CTGGAG 6 cut(s) 21, 27, 33, 488, 926, 1412
HaeII RGCGCY 1 cut(s) 476
HgaI GACGC 4 cut(s) 208, 219, 248, 296
HhaI GCGC 3 cut(s) 115, 247, 475
Hin1I GRCGYC 1 cut(s) 288
Hin1II CATG 7 cut(s) 85, 119, 199, 226, 673, 1003, 1118
Hin6I GCGC 3 cut(s) 113, 245, 473
HinP1I GCGC 3 cut(s) 113, 245, 473
HincII GTYRAC 1 cut(s) 756
HindII GTYRAC 1 cut(s) 756
HindIII AAGCTT 1 cut(s) 951
HinfI GANTC 5 cut(s) 256, 853, 1003, 1477, 1792
HphI GGTGA 3 cut(s) 514, 880, 922
Hpy166II GTNNAC 4 cut(s) 391, 517, 756, 1069
Hpy188I TCNGA 6 cut(s) 265, 551, 858, 936, 1242, 1653
Hpy8I GTNNAC 4 cut(s) 391, 517, 756, 1069
Hpy99I CGWCG 7 cut(s) 290, 734, 757, 760, 805, 808, 1111
HpyAV CCTTC 6 cut(s) 53, 289, 410, 592, 825, 1528
HpyCH4III ACNGT 3 cut(s) 1690, 1705, 1732
HpyCH4IV ACGT 5 cut(s) 387, 495, 519, 1065, 1571
HpyF3I CTNAG 2 cut(s) 1239, 1379
HpySE526I ACGT 5 cut(s) 387, 495, 519, 1065, 1571
Hsp92I GRCGYC 1 cut(s) 288
Hsp92II CATG 7 cut(s) 85, 119, 199, 226, 673, 1003, 1118
HspAI GCGC 3 cut(s) 113, 245, 473
Kpn2I TCCGGA 1 cut(s) 585
KroI GCCGGC 1 cut(s) 154
KroNI GCCGGC 1 cut(s) 156
Ksp22I TGATCA 1 cut(s) 1744
Kzo9I GATC 5 cut(s) 551, 931, 1224, 1744, 1768
LweI GCATC 9 cut(s) 558, 861, 879, 1163, 1216, 1443, 1552, 1585, 1795
MaeI CTAG 4 cut(s) 332, 594, 984, 1398
MaeII ACGT 5 cut(s) 387, 495, 519, 1065, 1571
MaeIII GTNAC 4 cut(s) 344, 446, 520, 1117
MalI GATC 5 cut(s) 553, 933, 1226, 1746, 1770
MbiI CCGCTC 1 cut(s) 1386
MboI GATC 5 cut(s) 551, 931, 1224, 1744, 1768
MfeI CAATTG 1 cut(s) 1046
MflI RGATCY 1 cut(s) 551
MhlI GDGCHC 3 cut(s) 195, 993, 999
MlsI TGGCCA 1 cut(s) 974
MluCI AATT 9 cut(s) 181, 377, 452, 613, 679, 1026, 1046, 1166, 1212
MluNI TGGCCA 1 cut(s) 974
MlyI GAGTC 1 cut(s) 997
MmeI TCCRAC 3 cut(s) 714, 1211, 1684
Mox20I TGGCCA 1 cut(s) 974
MreI CGCCGGCG 1 cut(s) 154
MroI TCCGGA 1 cut(s) 585
MroNI GCCGGC 1 cut(s) 154
MroXI GAANNNNTTC 1 cut(s) 387
MscI TGGCCA 1 cut(s) 974
MseI TTAA 2 cut(s) 252, 678
Msp20I TGGCCA 1 cut(s) 974
MspA1I CMGCKG 3 cut(s) 53, 68, 218
MspCI CTTAAG 1 cut(s) 251
MspR9I CCNGG 7 cut(s) 110, 325, 422, 427, 650, 976, 1552
MunI CAATTG 1 cut(s) 1046
MvaI CCWGG 4 cut(s) 110, 325, 976, 1552
MvnI CGCG 2 cut(s) 230, 285
NaeI GCCGGC 1 cut(s) 156
NciI CCSGG 3 cut(s) 422, 427, 650
NcoI CCATGG 2 cut(s) 81, 669
NdeII GATC 5 cut(s) 551, 931, 1224, 1744, 1768
NgoMIV GCCGGC 1 cut(s) 154
NheI GCTAGC 1 cut(s) 331
NlaIII CATG 7 cut(s) 85, 119, 199, 226, 673, 1003, 1118
NlaIV GGNNCC 6 cut(s) 64, 304, 484, 553, 1092, 1281
NmuCI GTSAC 2 cut(s) 520, 1117
NspI RCATGY 1 cut(s) 119
NspV TTCGAA 2 cut(s) 381, 1022
PagI TCATGA 2 cut(s) 195, 999
PaqCI CACCTGC 2 cut(s) 591, 856
PceI AGGCCT 1 cut(s) 1555
PcsI WCGNNNNNNNCGW 4 cut(s) 720, 729, 761, 800
PdiI GCCGGC 1 cut(s) 156
PdmI GAANNNNTTC 1 cut(s) 387
PfeI GAWTC 4 cut(s) 256, 853, 1477, 1792
PflFI GACNNNGTC 1 cut(s) 796
PfoI TCCNGGA 1 cut(s) 323
Ple19I CGATCG 1 cut(s) 1771
PleI GAGTC 1 cut(s) 997
PpsI GAGTC 1 cut(s) 997
PpuMI RGGWCCY 1 cut(s) 302
PshBI ATTAAT 1 cut(s) 678
PsiI TTATAA 1 cut(s) 402
Psp124BI GAGCTC 2 cut(s) 195, 999
Psp1406I AACGTT 1 cut(s) 387
Psp5II RGGWCCY 1 cut(s) 302
Psp6I CCWGG 4 cut(s) 108, 323, 974, 1550
PspFI CCCAGC 2 cut(s) 340, 1412
PspGI CCWGG 4 cut(s) 108, 323, 974, 1550
PspN4I GGNNCC 6 cut(s) 64, 304, 484, 553, 1092, 1281
PspPPI RGGWCCY 1 cut(s) 302
PstNI CAGNNNCTG 3 cut(s) 218, 1703, 1742
PsuI RGATCY 1 cut(s) 551
PsyI GACNNNGTC 1 cut(s) 796
PvuI CGATCG 1 cut(s) 1771
PvuII CAGCTG 2 cut(s) 53, 218
RsaI GTAC 3 cut(s) 722, 1469, 1520
RsaNI GTAC 3 cut(s) 721, 1468, 1519
Rsr2I CGGWCCG 1 cut(s) 261
RsrII CGGWCCG 1 cut(s) 261
SacI GAGCTC 2 cut(s) 195, 999
SalI GTCGAC 1 cut(s) 754
SaqAI TTAA 2 cut(s) 252, 678
Sau3AI GATC 5 cut(s) 551, 931, 1224, 1744, 1768
ScaI AGTACT 1 cut(s) 1520
SchI GAGTC 1 cut(s) 997
ScrFI CCNGG 7 cut(s) 110, 325, 422, 427, 650, 976, 1552
SduI GDGCHC 3 cut(s) 195, 993, 999
SfaNI GCATC 9 cut(s) 558, 861, 879, 1163, 1216, 1443, 1552, 1585, 1795
SfuI TTCGAA 2 cut(s) 381, 1022
SgrAI CRCCGGYG 2 cut(s) 154, 1087
SgrDI CGTCGACG 1 cut(s) 754
SinI GGWCC 5 cut(s) 261, 302, 408, 514, 1111
SmlI CTYRAG 4 cut(s) 251, 1005, 1194, 1680
SmoI CTYRAG 4 cut(s) 251, 1005, 1194, 1680
SpeI ACTAGT 1 cut(s) 593
Sse9I AATT 9 cut(s) 181, 377, 452, 613, 679, 1026, 1046, 1166, 1212
SseBI AGGCCT 1 cut(s) 1555
SspMI CTAG 4 cut(s) 332, 594, 984, 1398
SstI GAGCTC 2 cut(s) 195, 999
StuI AGGCCT 1 cut(s) 1555
StyD4I CCNGG 7 cut(s) 108, 323, 420, 425, 648, 974, 1550
StyI CCWWGG 3 cut(s) 81, 669, 1350
TaaI ACNGT 3 cut(s) 1690, 1705, 1732
TaiI ACGT 5 cut(s) 390, 498, 522, 1068, 1574
TaqI TCGA 7 cut(s) 381, 755, 806, 849, 1022, 1223, 1340
TaqII GACCGA 2 cut(s) 249, 1099
TasI AATT 9 cut(s) 181, 377, 452, 613, 679, 1026, 1046, 1166, 1212
TatI WGTACW 1 cut(s) 1518
TauI GCSGC 9 cut(s) 68, 89, 154, 230, 433, 662, 819, 1096, 1144
TfiI GAWTC 4 cut(s) 256, 853, 1477, 1792
Tru1I TTAA 2 cut(s) 252, 678
Tru9I TTAA 2 cut(s) 252, 678
TscAI CASTG 2 cut(s) 466, 1374
TseFI GTSAC 2 cut(s) 520, 1117
Tsp45I GTSAC 2 cut(s) 520, 1117
TspDTI ATGAA 2 cut(s) 875, 1160
TspGWI ACGGA 2 cut(s) 39, 1259
TspRI CASTG 2 cut(s) 466, 1374
Tth111I GACNNNGTC 1 cut(s) 796
Vha464I CTTAAG 1 cut(s) 251
VpaK11BI GGWCC 5 cut(s) 261, 302, 408, 514, 1111
VspI ATTAAT 1 cut(s) 678
XapI RAATTY 3 cut(s) 377, 452, 1212
XceI RCATGY 1 cut(s) 119
XmiI GTMKAC 1 cut(s) 755
XmnI GAANNNNTTC 1 cut(s) 387
XspI CTAG 4 cut(s) 332, 594, 984, 1398
ZrmI AGTACT 1 cut(s) 1520
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.