pycom14g11900
MYB Family

Trihelix transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
OG0006309
Physical Location & Seq
Reverse (-)
14973183 .. 14976410
3228 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g11900.3

Sequence Viewer

Length: 2166 bp
ATGCAGCAACCAGCAGCTGGAGGAGCTGGAGGGTCCCAAACCCATTACGGAGGAGCTGGAGAGATGAGTGCTGCTGAACCTGCGGCGGCGGAGCAAGGCCAGCTGGTGGTGGAAGCGGCGTCCCCAATCAGCAGCAGGCCGCCAGCTTCCGCGGCGGTGAATTTGGACGAGCTCATGACTCTGTCCGGCGCGGCGGCTGCAGCTGAAGATGCTCTCGCGGATCGAGGTGGCGGTGGTGGGTCCAGCGGGAACAGATGGCCGCGTCAGGAGACCCTGGCGCTTCTCAAAATCAGGTCCGATATGGATGTGGCCTTCCGTGACGCCACCCTCAAAGGCCCCTTGTGGGAAGATGTCTCCAGGAAACTAGCGGAATTGGGGTACCAAAGAAATGCCAAGAAATGCAAGGAGAAATTCGAAAACGTTCACAAATATTACAAGCGGACAAAAGAAGGCCGCGCGGGGCGCCAAGACGGCAAAAGCTACAAGTTTTTCAGCGAGCTGGAGGCTCTGCATGGCACCGCCGCAGCTACGACAGCTAACGTGTCAGCCTCTCCGGCCGTGCACGTCGCGTCTCCGAATCCGGTTTCTGTCGGGTTCGGATCTGTCACTAACCCCATGCCCATCTCATCGTTCAGAATGCCACAGCAACAGCAACCACCTCCCGCCACTGCAATTCCAATAATACCCTCGTCCCAGCCTACAGCCACTCCGATGGACTTTAACTTCTCCTCCAACAGCTCGTCGACTTCCCCGGGAACTGACGACGAGGACGACGATGATGACGTGGAAGGAGAGCGCTCGAGTCGGAAGCGAAAAAGGGGGAGTGCTAGTACTAGTACCGGAATTAGTGGCGGCGGTAGTACCCGAAAAATGATGAACTTTTTCGAGGTTCTGATGAAGCAAGTGATGCAAAAGCAAGAGAGCATGCAGCAGAGGTTTCTAGAAGTGATAGAGAAGAGGGAGCAGGACAGGACTATCAGGGAGGAGGCGTGGAAACGTCAGGAGATGGCCCGGTTAACTCGCGAGCAGGAGCTCATGAGTCAAGAGCGGGCCATCTCTGCTTCAAGAGATGCCGCCATTATCTCTTTCCTGCAGAAAATTACTGGTCAGACTATTCAGTTGCCTCCGCCGGTCAATGTCCACGCCGCTCCCCCACCACCTGTGCCTCCGTCGGTGTCGGTTGTCACGCCTTTACCACAGACAACGCCACAGCCGACGACACAGACATATCAAACACCGCAACAGCAACAACCTCAGCCACCGCAACAAATGCAACAAGTTCGTCATGTTCAGCAGCCTCAAAATGTTCAACCGGTGATGGCTGTACCGGAACAGCAGGTACCTCCGACAGCGCAGGAGAATATTGCTAGCGGTGGAGGAGGAGGGAGCTCCGAGCCTGCATCATCTTCGAGATGGCCCAAGGCAGAAGTACTGGCGCTGATAAAGTTGAGGAGCGGGCTTGAGTCAAGGTACCAAGATGCAGGGCCGAAAGGCCCACTTTGGGAGGAAATCTCCGCCGGCATGGGGCGGATCGGGTACAATAGGAGTTCCAAGAGGTGCAAGGAGAAATGGGAGAACATCAACAAGTACTTCAAGAAGGTGAAGGAGAGCAACAAGAAGCGGCCCGAGGATGCGAAAACGTGTCCATATTTTCACGAACTAGATGCCCTTTACCGGAAAAGGGTGCTTGGCGGTGGGTCTACGGGCGGCAGCAGCAGCTCGTTGGGAAATATGCTAGAACAACCACCTCAACAGGAGCAAGTAGTGGCCGGATCAGAAAACAAGAATGCAGATGATAGCACGAATGTGGAAACAAATTTGAGAGCTAACCTCTTTGGAGAGGGAACAGCAGAGGCTGCCAAGAAGCCAGAAGACATTGTGAAGGAGTTGATGGAGGTGCATGATCACCAACAAGTCCTCCAACAAGGGCACCCACAACATTTTGGAGTAGATGAATGCAATAGGATGGAGGAAGCGGATAGCGATAATCTTATGGATCAAGAGGAGGAGGACATGGAAGACGAGGACATGGACGAGGAAGACGATGAAGAAACGGAGCAAGAGCGGAAGATGGCTTACAAGATAGAGTTTCAGAAGCAGAATACAGGCCCTTCGTCCAACGGCGGAGGCAATGGTGCACCTTCTTTCCTCGCCATGGTTCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000902 GO:0000904 GO:0001101 GO:0001558 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006275 GO:0006351 GO:0006355 GO:0006725 GO:0006807 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0008156 GO:0008361 GO:0009058 GO:0009059 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009653 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0009991 GO:0010026 GO:0010035 GO:0010090 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010564 GO:0010605 GO:0010629 GO:0010948 GO:0016043 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030154 GO:0030308 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031668 GO:0032502 GO:0032535 GO:0032774 GO:0032875 GO:0032876 GO:0032989 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0040008 GO:0042221 GO:0042631 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045786 GO:0045892 GO:0045926 GO:0045934 GO:0046483 GO:0048468 GO:0048519 GO:0048523 GO:0048580 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051128 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065008 GO:0070887 GO:0071214 GO:0071229 GO:0071462 GO:0071496 GO:0071704 GO:0071840 GO:0080090 GO:0090066 GO:0090304 GO:0090329 GO:0090558 GO:0090626 GO:0097159 GO:0097659 GO:0104004 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1901700 GO:1901701 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000037 GO:2000038 GO:2000104 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-bind_4

Protein Analysis

722

Amino Acids

78.61

Weight (kDa)

5.29

Isoelectric Point (pI)

66.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 88, 1327
Acc65I GGTACC 3 cut(s) 378, 1339, 1470
AccB1I GGYRCC 6 cut(s) 378, 462, 515, 1339, 1470, 1929
AccB7I CCANNNNNTGG 2 cut(s) 17, 106
AccBSI CCGCTC 4 cut(s) 1048, 1148, 1455, 2065
AccI GTMKAC 2 cut(s) 743, 1700
AccII CGCG 8 cut(s) 152, 191, 218, 262, 456, 458, 569, 1023
AclI AACGTT 1 cut(s) 420
AclWI GGATC 5 cut(s) 228, 607, 1538, 1780, 2004
AcoI YGGCCR 3 cut(s) 257, 555, 1767
AcsI RAATTY 3 cut(s) 160, 410, 1816
AcuI CTGAAG 1 cut(s) 225
AcyI GRCGYC 3 cut(s) 119, 321, 463
AfeI AGCGCT 1 cut(s) 797
AfiI CCNNNNNNNGG 8 cut(s) 17, 106, 343, 1501, 1524, 1674, 1681, 2155
AflIII ACRYGT 2 cut(s) 540, 1640
AgeI ACCGGT 1 cut(s) 1312
AgsI TTSAA 3 cut(s) 1065, 1310, 1594
AhlI ACTAGT 1 cut(s) 833
AjiI CACGTC 2 cut(s) 565, 784
AjnI CCWGG 2 cut(s) 273, 356
AleI CACNNNNGTG 1 cut(s) 1805
Alw21I GWGCWC 5 cut(s) 174, 564, 1035, 1391, 2140
Alw26I GTCTC 3 cut(s) 263, 358, 576
Alw44I GTGCAC 2 cut(s) 560, 2136
AlwI GGATC 5 cut(s) 228, 607, 1538, 1780, 2004
AlwNI CAGNNNCTG 2 cut(s) 17, 1856
Ama87I CYCGRG 3 cut(s) 751, 799, 1625
Aor51HI AGCGCT 1 cut(s) 797
ApaLI GTGCAC 2 cut(s) 560, 2136
ApoI RAATTY 3 cut(s) 160, 410, 1816
AsiGI ACCGGT 1 cut(s) 1312
Asp700I GAANNNNTTC 2 cut(s) 420, 881
Asp718I GGTACC 3 cut(s) 378, 1339, 1470
AspLEI GCGC 7 cut(s) 191, 280, 458, 465, 798, 1354, 1438
AsuC2I CCSGG 3 cut(s) 752, 753, 1012
AsuHPI GGTGA 4 cut(s) 169, 1327, 1612, 1898
AsuII TTCGAA 1 cut(s) 414
AsuNHI GCTAGC 1 cut(s) 1367
AvaI CYCGRG 3 cut(s) 751, 799, 1625
AvaII GGWCC 3 cut(s) 33, 240, 294
BaeGI GKGCMC 3 cut(s) 564, 1932, 2140
BanI GGYRCC 6 cut(s) 378, 462, 515, 1339, 1470, 1929
BanII GRGCYC 3 cut(s) 174, 1035, 1391
BarI GAAGNNNNNNTAC 2 cut(s) 2060, 2092
BbsI GAAGAC 3 cut(s) 1878, 2025, 2046
Bbv12I GWGCWC 5 cut(s) 174, 564, 1035, 1391, 2140
BbvCI CCTCAGC 1 cut(s) 1254
BceAI ACGGC 3 cut(s) 487, 542, 2137
BcgI CGANNNNNNTGC 6 cut(s) 1262, 1296, 1389, 1423, 1646, 1680
BciT130I CCWGG 2 cut(s) 275, 358
BclI TGATCA 1 cut(s) 1903
BcnI CCSGG 3 cut(s) 752, 753, 1012
BcoDI GTCTC 3 cut(s) 263, 358, 576
BcuI ACTAGT 1 cut(s) 833
BfaI CTAG 7 cut(s) 365, 828, 834, 941, 1368, 1661, 1736
BfmI CTRYAG 3 cut(s) 198, 699, 1091
BfoI RGCGCY 4 cut(s) 281, 466, 799, 1439
BfuAI ACCTGC 2 cut(s) 88, 1327
BglI GCCNNNNNGGC 2 cut(s) 471, 554
BmcAI AGTACT 3 cut(s) 832, 1431, 1589
Bme1390I CCNGG 5 cut(s) 275, 358, 752, 753, 1012
Bme18I GGWCC 3 cut(s) 33, 240, 294
BmeT110I CYCGRG 3 cut(s) 751, 799, 1625
BmgBI CACGTC 2 cut(s) 565, 784
BmrFI CCNGG 5 cut(s) 275, 358, 752, 753, 1012
BmsI GCATC 7 cut(s) 199, 897, 1060, 1409, 1468, 1621, 1654
BmtI GCTAGC 1 cut(s) 1371
BpiI GAAGAC 3 cut(s) 1878, 2025, 2046
BplI GAGNNNNNCTC 4 cut(s) 1496, 1528, 1815, 1847
BpmI CTGGAG 5 cut(s) 39, 48, 78, 340, 521
Bpu10I CCTNAGC 1 cut(s) 1254
Bpu14I TTCGAA 1 cut(s) 414
BpuEI CTTGAG 1 cut(s) 1481
BpuMI CCSGG 3 cut(s) 752, 753, 1012
BsaHI GRCGYC 3 cut(s) 119, 321, 463
BsaI GGTCTC 1 cut(s) 263
BsaJI CCNNGG 7 cut(s) 150, 273, 750, 751, 1419, 1626, 2154
BsaWI WCCGGW 5 cut(s) 580, 839, 1312, 1327, 1674
Bsc4I CCNNNNNNNGG 8 cut(s) 17, 106, 343, 1501, 1524, 1674, 1681, 2155
Bse118I RCCGGY 3 cut(s) 1129, 1312, 1517
Bse1I ACTGG 2 cut(s) 1108, 1437
Bse3DI GCAATG 1 cut(s) 2137
BseBI CCWGG 2 cut(s) 275, 358
BseDI CCNNGG 7 cut(s) 150, 273, 750, 751, 1419, 1626, 2154
BseGI GGATG 3 cut(s) 310, 1636, 1971
BseLI CCNNNNNNNGG 8 cut(s) 17, 106, 343, 1501, 1524, 1674, 1681, 2155
BseMI GCAATG 1 cut(s) 2137
BseMII CTCAG 1 cut(s) 1268
BseNI ACTGG 2 cut(s) 1108, 1437
BseRI GAGGAG 9 cut(s) 36, 66, 718, 998, 1392, 1395, 1465, 2018, 2021
BseSI GKGCMC 3 cut(s) 564, 1932, 2140
BseX3I CGGCCG 1 cut(s) 555
BseYI CCCAGC 1 cut(s) 693
Bsh1236I CGCG 8 cut(s) 152, 191, 218, 262, 456, 458, 569, 1023
Bsh1285I CGRYCG 1 cut(s) 558
BshNI GGYRCC 6 cut(s) 378, 462, 515, 1339, 1470, 1929
BshTI ACCGGT 1 cut(s) 1312
BsiEI CGRYCG 1 cut(s) 558
BsiHKAI GWGCWC 5 cut(s) 174, 564, 1035, 1391, 2140
BsiHKCI CYCGRG 3 cut(s) 751, 799, 1625
BslFI GGGAC 3 cut(s) 19, 106, 676
BslI CCNNNNNNNGG 8 cut(s) 17, 106, 343, 1501, 1524, 1674, 1681, 2155
BsmAI GTCTC 3 cut(s) 263, 358, 576
BsmBI CGTCTC 1 cut(s) 576
BsmFI GGGAC 3 cut(s) 19, 106, 676
BsmI GAATGC 3 cut(s) 642, 1792, 1961
Bso31I GGTCTC 1 cut(s) 263
BsoBI CYCGRG 3 cut(s) 751, 799, 1625
Bsp119I TTCGAA 1 cut(s) 414
Bsp1286I GDGCHC 6 cut(s) 174, 564, 1035, 1391, 1932, 2140
Bsp143I GATC 6 cut(s) 220, 599, 1530, 1772, 1903, 1996
Bsp19I CCATGG 1 cut(s) 2154
Bsp68I TCGCGA 1 cut(s) 1023
BspCNI CTCAG 1 cut(s) 1267
BspFNI CGCG 8 cut(s) 152, 191, 218, 262, 456, 458, 569, 1023
BspHI TCATGA 2 cut(s) 174, 1035
BspMAI CTGCAG 2 cut(s) 202, 1095
BspMI ACCTGC 2 cut(s) 88, 1327
BspOI GCTAGC 1 cut(s) 1371
BspPI GGATC 5 cut(s) 228, 607, 1538, 1780, 2004
BspT104I TTCGAA 1 cut(s) 414
BspT107I GGYRCC 6 cut(s) 378, 462, 515, 1339, 1470, 1929
BspTNI GGTCTC 1 cut(s) 263
BsrBI CCGCTC 4 cut(s) 1048, 1148, 1455, 2065
BsrDI GCAATG 1 cut(s) 2137
BsrFI RCCGGY 3 cut(s) 1129, 1312, 1517
BsrI ACTGG 2 cut(s) 1108, 1437
BssAI RCCGGY 3 cut(s) 1129, 1312, 1517
BssECI CCNNGG 7 cut(s) 150, 273, 750, 751, 1419, 1626, 2154
BssMI GATC 6 cut(s) 220, 599, 1530, 1772, 1903, 1996
BssNI GRCGYC 3 cut(s) 119, 321, 463
BssT1I CCWWGG 2 cut(s) 1419, 2154
Bst2UI CCWGG 2 cut(s) 275, 358
Bst6I CTCTTC 1 cut(s) 950
BstACI GRCGYC 3 cut(s) 119, 321, 463
BstAPI GCANNNNNTGC 3 cut(s) 907, 1270, 1856
BstBI TTCGAA 1 cut(s) 414
BstDEI CTNAG 1 cut(s) 1254
BstDSI CCRYGG 2 cut(s) 150, 2154
BstF5I GGATG 3 cut(s) 310, 1636, 1971
BstFNI CGCG 8 cut(s) 152, 191, 218, 262, 456, 458, 569, 1023
BstH2I RGCGCY 4 cut(s) 281, 466, 799, 1439
BstHHI GCGC 7 cut(s) 191, 280, 458, 465, 798, 1354, 1438
BstKTI GATC 6 cut(s) 223, 602, 1533, 1775, 1906, 1999
BstMAI GTCTC 3 cut(s) 263, 358, 576
BstMBI GATC 6 cut(s) 220, 599, 1530, 1772, 1903, 1996
BstMCI CGRYCG 1 cut(s) 558
BstNI CCWGG 2 cut(s) 275, 358
BstNSI RCATGY 1 cut(s) 928
BstSCI CCNGG 5 cut(s) 273, 356, 750, 751, 1010
BstSFI CTRYAG 3 cut(s) 198, 699, 1091
BstSLI GKGCMC 3 cut(s) 564, 1932, 2140
BstUI CGCG 8 cut(s) 152, 191, 218, 262, 456, 458, 569, 1023
BstV2I GAAGAC 3 cut(s) 1878, 2025, 2046
BstX2I RGATCY 1 cut(s) 599
BstXI CCANNNNNNTGG 1 cut(s) 712
BstYI RGATCY 1 cut(s) 599
BstZI CGGCCG 1 cut(s) 555
BtgI CCRYGG 2 cut(s) 150, 2154
BtrI CACGTC 2 cut(s) 565, 784
BtsCI GGATG 3 cut(s) 310, 1636, 1971
BtsI GCAGTG 1 cut(s) 666
BtsIMutI CAGTG 1 cut(s) 666
BtuMI TCGCGA 1 cut(s) 1023
BveI ACCTGC 2 cut(s) 88, 1327
CaiI CAGNNNCTG 2 cut(s) 17, 1856
CciI TCATGA 2 cut(s) 174, 1035
CfoI GCGC 7 cut(s) 191, 280, 458, 465, 798, 1354, 1438
Cfr10I RCCGGY 3 cut(s) 1129, 1312, 1517
Cfr42I CCGCGG 1 cut(s) 153
Cfr9I CCCGGG 1 cut(s) 751
CseI GACGC 4 cut(s) 108, 251, 329, 558
CspAI ACCGGT 1 cut(s) 1312
DdeI CTNAG 1 cut(s) 1254
DinI GGCGCC 1 cut(s) 464
DpnI GATC 6 cut(s) 222, 601, 1532, 1774, 1905, 1998
DpnII GATC 6 cut(s) 220, 599, 1530, 1772, 1903, 1996
EaeI YGGCCR 3 cut(s) 257, 555, 1767
EagI CGGCCG 1 cut(s) 555
Eam1104I CTCTTC 1 cut(s) 950
EarI CTCTTC 1 cut(s) 950
EciI GGCGGA 5 cut(s) 104, 1116, 1504, 1543, 2139
Ecl136II GAGCTC 3 cut(s) 172, 1033, 1389
EclXI CGGCCG 1 cut(s) 555
Eco130I CCWWGG 2 cut(s) 1419, 2154
Eco24I GRGCYC 3 cut(s) 174, 1035, 1391
Eco31I GGTCTC 1 cut(s) 263
Eco47I GGWCC 3 cut(s) 33, 240, 294
Eco47III AGCGCT 1 cut(s) 797
Eco52I CGGCCG 1 cut(s) 555
Eco53kI GAGCTC 3 cut(s) 172, 1033, 1389
Eco57I CTGAAG 1 cut(s) 225
Eco88I CYCGRG 3 cut(s) 751, 799, 1625
EcoICRI GAGCTC 3 cut(s) 172, 1033, 1389
EcoO109I RGGNCCY 3 cut(s) 33, 335, 2108
EcoRII CCWGG 2 cut(s) 273, 356
EcoT14I CCWWGG 2 cut(s) 1419, 2154
EcoT38I GRGCYC 3 cut(s) 174, 1035, 1391
EgeI GGCGCC 1 cut(s) 464
EheI GGCGCC 1 cut(s) 464
ErhI CCWWGG 2 cut(s) 1419, 2154
Esp3I CGTCTC 1 cut(s) 576
FalI AAGNNNNNCTT 2 cut(s) 1482, 1514
FaqI GGGAC 3 cut(s) 19, 106, 676
FauI CCCGC 5 cut(s) 239, 451, 670, 1041, 1448
FbaI TGATCA 1 cut(s) 1903
FblI GTMKAC 2 cut(s) 743, 1700
FokI GGATG 3 cut(s) 317, 1643, 1978
FriOI GRGCYC 3 cut(s) 174, 1035, 1391
FspBI CTAG 7 cut(s) 365, 828, 834, 941, 1368, 1661, 1736
GlaI GCGC 7 cut(s) 190, 279, 457, 464, 797, 1353, 1437
GsaI CCCAGC 1 cut(s) 697
GsuI CTGGAG 5 cut(s) 39, 48, 78, 340, 521
HaeII RGCGCY 4 cut(s) 281, 466, 799, 1439
HgaI GACGC 4 cut(s) 108, 251, 329, 558
HhaI GCGC 7 cut(s) 191, 280, 458, 465, 798, 1354, 1438
Hin1I GRCGYC 3 cut(s) 119, 321, 463
Hin6I GCGC 7 cut(s) 189, 278, 456, 463, 796, 1352, 1436
HinP1I GCGC 7 cut(s) 189, 278, 456, 463, 796, 1352, 1436
HincII GTYRAC 2 cut(s) 744, 1017
HindII GTYRAC 2 cut(s) 744, 1017
HinfI GANTC 5 cut(s) 178, 577, 802, 1039, 1463
HpaI GTTAAC 1 cut(s) 1017
HphI GGTGA 4 cut(s) 169, 1327, 1612, 1898
Hpy166II GTNNAC 7 cut(s) 424, 562, 744, 1017, 1141, 1701, 2138
Hpy8I GTNNAC 7 cut(s) 424, 562, 744, 1017, 1141, 1701, 2138
Hpy99I CGWCG 6 cut(s) 569, 745, 767, 776, 1174, 1219
HpyAV CCTTC 8 cut(s) 322, 443, 782, 1591, 1597, 1876, 2121, 2151
HpyCH4IV ACGT 6 cut(s) 420, 540, 564, 783, 997, 1640
HpyF3I CTNAG 1 cut(s) 1254
HpySE526I ACGT 6 cut(s) 420, 540, 564, 783, 997, 1640
Hsp92I GRCGYC 3 cut(s) 119, 321, 463
HspAI GCGC 7 cut(s) 189, 278, 456, 463, 796, 1352, 1436
KasI GGCGCC 1 cut(s) 462
KflI GGGWCCC 1 cut(s) 33
KpnI GGTACC 3 cut(s) 382, 1343, 1474
KroI GCCGGC 1 cut(s) 1517
KroNI GCCGGC 1 cut(s) 1519
Ksp22I TGATCA 1 cut(s) 1903
KspAI GTTAAC 1 cut(s) 1017
KspI CCGCGG 1 cut(s) 153
Kzo9I GATC 6 cut(s) 220, 599, 1530, 1772, 1903, 1996
LweI GCATC 7 cut(s) 199, 897, 1060, 1409, 1468, 1621, 1654
MaeI CTAG 7 cut(s) 365, 828, 834, 941, 1368, 1661, 1736
MaeII ACGT 6 cut(s) 420, 540, 564, 783, 997, 1640
MaeIII GTNAC 3 cut(s) 317, 604, 1183
MalI GATC 6 cut(s) 222, 601, 1532, 1774, 1905, 1998
MbiI CCGCTC 4 cut(s) 1048, 1148, 1455, 2065
MboI GATC 6 cut(s) 220, 599, 1530, 1772, 1903, 1996
MboII GAAGA 9 cut(s) 218, 359, 967, 1398, 1883, 2030, 2051, 2060, 2080
MflI RGATCY 1 cut(s) 599
MhlI GDGCHC 6 cut(s) 174, 564, 1035, 1391, 1932, 2140
MluCI AATT 7 cut(s) 160, 371, 410, 672, 843, 1098, 1816
Mly113I GGCGCC 1 cut(s) 463
MlyI GAGTC 4 cut(s) 172, 811, 1048, 1472
MmeI TCCRAC 5 cut(s) 756, 785, 1370, 1945, 2142
MroNI GCCGGC 1 cut(s) 1517
MroXI GAANNNNTTC 2 cut(s) 420, 881
MseI TTAA 2 cut(s) 720, 1016
MslI CAYNNNNRTG 2 cut(s) 710, 1805
MspA1I CMGCKG 5 cut(s) 17, 103, 152, 203, 246
MspR9I CCNGG 5 cut(s) 275, 358, 752, 753, 1012
Mva1269I GAATGC 3 cut(s) 642, 1792, 1961
MvaI CCWGG 2 cut(s) 275, 358
MvnI CGCG 8 cut(s) 152, 191, 218, 262, 456, 458, 569, 1023
NaeI GCCGGC 1 cut(s) 1519
NarI GGCGCC 1 cut(s) 463
NciI CCSGG 3 cut(s) 752, 753, 1012
NcoI CCATGG 1 cut(s) 2154
NdeII GATC 6 cut(s) 220, 599, 1530, 1772, 1903, 1996
NgoMIV GCCGGC 1 cut(s) 1517
NheI GCTAGC 1 cut(s) 1367
NmuCI GTSAC 3 cut(s) 317, 604, 1183
NruI TCGCGA 1 cut(s) 1023
NspI RCATGY 1 cut(s) 928
NspV TTCGAA 1 cut(s) 414
OliI CACNNNNGTG 1 cut(s) 1805
PaeI GCATGC 1 cut(s) 928
PaeR7I CTCGAG 1 cut(s) 799
PagI TCATGA 2 cut(s) 174, 1035
PcsI WCGNNNNNNNCGW 5 cut(s) 768, 771, 780, 1211, 2040
PctI GAATGC 3 cut(s) 642, 1792, 1961
PdiI GCCGGC 1 cut(s) 1519
PdmI GAANNNNTTC 2 cut(s) 420, 881
PfeI GAWTC 1 cut(s) 577
PflFI GACNNNGTC 1 cut(s) 181
PflMI CCANNNNNTGG 2 cut(s) 17, 106
PfoI TCCNGGA 1 cut(s) 356
PinAI ACCGGT 1 cut(s) 1312
PleI GAGTC 4 cut(s) 172, 810, 1047, 1471
PluTI GGCGCC 1 cut(s) 466
PpsI GAGTC 4 cut(s) 172, 810, 1047, 1471
PpuMI RGGWCCY 1 cut(s) 33
Psp124BI GAGCTC 3 cut(s) 174, 1035, 1391
Psp1406I AACGTT 1 cut(s) 420
Psp5II RGGWCCY 1 cut(s) 33
Psp6I CCWGG 2 cut(s) 273, 356
PspFI CCCAGC 1 cut(s) 693
PspGI CCWGG 2 cut(s) 273, 356
PspPPI RGGWCCY 1 cut(s) 33
PspXI VCTCGAGB 1 cut(s) 799
PsrI GAACNNNNNNTAC 2 cut(s) 1323, 1355
PstI CTGCAG 2 cut(s) 202, 1095
PstNI CAGNNNCTG 2 cut(s) 17, 1856
PsuI RGATCY 1 cut(s) 599
PsyI GACNNNGTC 1 cut(s) 181
PvuII CAGCTG 3 cut(s) 17, 103, 203
RruI TCGCGA 1 cut(s) 1023
RseI CAYNNNNRTG 2 cut(s) 710, 1805
SacI GAGCTC 3 cut(s) 174, 1035, 1391
SacII CCGCGG 1 cut(s) 153
SalI GTCGAC 1 cut(s) 742
SaqAI TTAA 2 cut(s) 720, 1016
Sau3AI GATC 6 cut(s) 220, 599, 1530, 1772, 1903, 1996
ScaI AGTACT 3 cut(s) 832, 1431, 1589
SchI GAGTC 4 cut(s) 172, 811, 1048, 1472
ScrFI CCNGG 5 cut(s) 275, 358, 752, 753, 1012
SduI GDGCHC 6 cut(s) 174, 564, 1035, 1391, 1932, 2140
SfaNI GCATC 7 cut(s) 199, 897, 1060, 1409, 1468, 1621, 1654
SfcI CTRYAG 3 cut(s) 198, 699, 1091
SfoI GGCGCC 1 cut(s) 464
Sfr274I CTCGAG 1 cut(s) 799
Sfr303I CCGCGG 1 cut(s) 153
SfuI TTCGAA 1 cut(s) 414
SgrBI CCGCGG 1 cut(s) 153
SinI GGWCC 3 cut(s) 33, 240, 294
SlaI CTCGAG 1 cut(s) 799
SmaI CCCGGG 1 cut(s) 753
SmiMI CAYNNNNRTG 2 cut(s) 710, 1805
SmlI CTYRAG 2 cut(s) 799, 1460
SmoI CTYRAG 2 cut(s) 799, 1460
SpeI ACTAGT 1 cut(s) 833
SphI GCATGC 1 cut(s) 928
Sse9I AATT 7 cut(s) 160, 371, 410, 672, 843, 1098, 1816
SspDI GGCGCC 1 cut(s) 462
SspI AATATT 2 cut(s) 431, 1363
SspMI CTAG 7 cut(s) 365, 828, 834, 941, 1368, 1661, 1736
SstI GAGCTC 3 cut(s) 174, 1035, 1391
StyD4I CCNGG 5 cut(s) 273, 356, 750, 751, 1010
StyI CCWWGG 2 cut(s) 1419, 2154
TaiI ACGT 6 cut(s) 423, 543, 567, 786, 1000, 1643
TaqI TCGA 6 cut(s) 223, 414, 743, 800, 885, 1409
TasI AATT 7 cut(s) 160, 371, 410, 672, 843, 1098, 1816
TatI WGTACW 3 cut(s) 830, 1429, 1587
TfiI GAWTC 1 cut(s) 577
Tru1I TTAA 2 cut(s) 720, 1016
Tru9I TTAA 2 cut(s) 720, 1016
TscAI CASTG 1 cut(s) 673
TseFI GTSAC 3 cut(s) 317, 604, 1183
Tsp45I GTSAC 3 cut(s) 317, 604, 1183
TspDTI ATGAA 4 cut(s) 890, 911, 1968, 2061
TspGWI ACGGA 4 cut(s) 63, 305, 1158, 2069
TspMI CCCGGG 1 cut(s) 751
TspRI CASTG 1 cut(s) 673
Tth111I GACNNNGTC 1 cut(s) 181
Van91I CCANNNNNTGG 2 cut(s) 17, 106
VneI GTGCAC 2 cut(s) 560, 2136
VpaK11BI GGWCC 3 cut(s) 33, 240, 294
XapI RAATTY 3 cut(s) 160, 410, 1816
XbaI TCTAGA 1 cut(s) 940
XceI RCATGY 1 cut(s) 928
XhoI CTCGAG 1 cut(s) 799
XmaI CCCGGG 1 cut(s) 751
XmiI GTMKAC 2 cut(s) 743, 1700
XmnI GAANNNNTTC 2 cut(s) 420, 881
XspI CTAG 7 cut(s) 365, 828, 834, 941, 1368, 1661, 1736
ZrmI AGTACT 3 cut(s) 832, 1431, 1589
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.