Rh7BG094500
MYB Family

Trihelix transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0006309
Physical Location & Seq
Reverse (-)
6947364 .. 6952317
4954 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG094500.1

Sequence Viewer

Length: 2298 bp
ATGCAAGGCGGGCAGTCCCATTACGGAGCTTCAGCTTCAGCTCCAGCTGCCGAAGGGGCCGCTGCTACTACTTCCATGGCGGCGGATGCAGCAGCAGACCAAACGCATGTAGTTGAAGAGGCTTCCCCCATCAGCAGCAGGCCGCCGGCGGGAGGAGCAATCTCCGCCGTCAATTTGGACGAGCTCATGACGCTCTCCGGTGCAGCAGCTGACGTGGCGGCAGATCAAGGCGGCGGCGGCGGAGGTGGAGGGTCCGGCGGCGGGAACAGATGGCCGCGTCAGGAGACGCTGGCGCTTCTTAAGATTCGGTCCGAGATGGATGTGGCCTTCCGCGACGCCACTCTCAAAGGTCCCTTATGGGAAGATGTTTCCAGGAAGCTAGCGGAGTTGGGTTACAAGCGAAATGCGAAGAAGTGCAAAGAGAAATTCGAAAACGTTCACAAGTATTATAAGAGGACCAAAGAAGGACGGGCCGGGCGGCAAGACGGCAAGAGTTACAAGTTTTTCAGTGAGCTGGAGGCGCTCCACGGCACCGCCAACGTGTCGGCTTCTCCGCCGGTCCACGCCACTACCGCAGCTACCAACACTCCGGTTTCTATCGGTTTCGGATCCATCAGCAGCCCGATGCCCATTTCGTCTTTCCGGATGACTAGTGGCAGCGGCACCACTTCTACTATTCCGGTTATGACCTCGCAGGGTCCGGGTGCAATTCCAGTAATGCCCTCGTCCCAACCACCACCGCCCCCCGCCGGCACTCCCATGGACACCATTAATTTCTCTTCCAACAGCTCCTCCTCCTCCTCGCACGGCGGCGAGGACGATGACTACGAGGACGACGATGAGGTGGCGGGAGAGCCGTCGACGAACACGAGCCGGAAGCGGAAGAGGTCGTCGTCGAGAGAGAGCGGCGGAAGCACGAGAAGGATGATGGAGTTTTTCGAGATTCTGATGAAGCAGGTGATGCAGAAGCAAGAGACGATGCAGCAGAGGTTTCTGGAAGTGATTGAGAAGAGGGAGCAAGATCGGAACATAAGGGAAGAAGCTTGGAAGAGGCAAGAGATGGCCAGGCTGACTAGAGAGCACGAGCTCATGACTCAAGAGCGAGCCATTTCGGCTTCCAGAGACGCCGCCATTATCGCATTTCTGCAGAAAATTACCGGCCAGACTATCCAATTGCCTCCGCCCCTAAACGTCCACAATGCTCCTCACCCGCCGTCTGTGTCGTCGGTCCATGTCACGCCAATATCAGCACCACCGCCACAACCATCAGTCCAACAATTTCATCCGCATCAACAGCACAGTACTCCAACTGCTCAAGTTTCACGGCATCAAATTCAAACTTCGATCCCGCCTAATCCTCAGACGGAGGTAGTTATGGCTGTGCCGGAGCAACAGGTGGCACCGCCACAGGAGAATGTAGTCGGTAGTGGAGGAGGTTTTGAGGCAACAACCTCATCTTCGAGGTGGCCCAAGGCGGAAGTTCTTGCACTGATAAAGCTGAGGAGCGGACTGGAGACTAGGTATCAAGAGGCTGGGCCGAAAGGTCCACTTTGGGAGGAGATTTCCGCAGGGATGCAGCGAATGGGGTACAAGAGGAATCCCAAGAGGTGCAAAGAGAAATGGGAGAACATCAACAAGTACTTCAAGAAAGTGAAGGAGAGCAACAAGGCCAGGCCCGAAGATGCGAAAACGTGTCCTTATTTTCACGAACTGGATGCACTCTACCGGAAAAGGATACTCGGCGGTAGTGGCCCTAGTGGTGGCGGTGGAAGCAGCAGCTCATTGGGTAATCAGAATATCCAACAACAGCCACAACAAGCACCGGCTACTCAAGCGACAGCAGCAGCAGCAGCAACCGTGCCTGCACCACCAACACAAGGAACAGTAGCAGCTACTGATCAATCAGGAAACAAGAGTGGTGATCATAGCCCAAATCTGCAAAAGAATCTCTTTGGAGATGCACCTGAAGAGGCAGCCAAGAAGCCAGAAGACATTGTGAAGGAGTTGATGGGGCAACAGCAACAGCAACAACATCATCATCCACAACAACTACTCAACCAACAAGGGGTACAGCAGCAATTAGTAGTAGAAGACTATGATAGAGTTGAGGAAGCTGACAGCGACATCAATCTCGATCAAGATGAGGAGGAGGACGAAGATGACGAAGAGGATGAAGAAATGGATGAGGAGAGCAGGAAGATGGATTATAAGATTGAGTTTCAGAAGCAACAGAATACAGGCCCTTCATCTAATGGGGGAGGCAATGGGGCACCCTCCTTCTTGGCAATGGTTCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000902 GO:0000904 GO:0001101 GO:0001558 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006275 GO:0006351 GO:0006355 GO:0006725 GO:0006807 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0008156 GO:0008361 GO:0009058 GO:0009059 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009653 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0009991 GO:0010026 GO:0010035 GO:0010090 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010564 GO:0010605 GO:0010629 GO:0010948 GO:0016043 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030154 GO:0030308 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031668 GO:0032502 GO:0032535 GO:0032774 GO:0032875 GO:0032876 GO:0032989 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0040008 GO:0042221 GO:0042631 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045786 GO:0045892 GO:0045926 GO:0045934 GO:0046483 GO:0048468 GO:0048519 GO:0048523 GO:0048580 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051128 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065008 GO:0070887 GO:0071214 GO:0071229 GO:0071462 GO:0071496 GO:0071704 GO:0071840 GO:0080090 GO:0090066 GO:0090304 GO:0090329 GO:0090558 GO:0090626 GO:0097159 GO:0097659 GO:0104004 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1901700 GO:1901701 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000037 GO:2000038 GO:2000104 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-bind_4

Protein Analysis

765

Amino Acids

82.71

Weight (kDa)

5.62

Isoelectric Point (pI)

64.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-bind_4 PF13837 89 - 175 9.3e-24 Myb/SANT-like DNA-binding domain
Myb_DNA-bind_4 PF13837 487 - 574 1.4e-25 Myb/SANT-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 450, 2208
AarI CACCTGC 1 cut(s) 946
Acc36I ACCTGC 1 cut(s) 946
AccB1I GGYRCC 4 cut(s) 530, 662, 1399, 2269
AccBSI CCGCTC 2 cut(s) 906, 1506
AccI GTMKAC 1 cut(s) 860
AccII CGCG 2 cut(s) 277, 333
AccIII TCCGGA 1 cut(s) 642
AclI AACGTT 1 cut(s) 435
AclWI GGATC 3 cut(s) 603, 616, 1339
AcoI YGGCCR 3 cut(s) 272, 1062, 1159
AcsI RAATTY 2 cut(s) 425, 1332
AcuI CTGAAG 3 cut(s) 15, 21, 1986
AcyI GRCGYC 2 cut(s) 336, 1125
AfaI GTAC 4 cut(s) 1303, 1589, 1640, 2070
AfiI CCNNNNNNNGG 7 cut(s) 149, 152, 261, 749, 1760, 1877, 2065
AflII CTTAAG 1 cut(s) 299
AflIII ACRYGT 2 cut(s) 540, 1691
AgsI TTSAA 4 cut(s) 116, 1337, 1645, 2294
AhlI ACTAGT 1 cut(s) 650
AjiI CACGTC 1 cut(s) 214
AjnI CCWGG 3 cut(s) 371, 1064, 1670
Alw21I GWGCWC 3 cut(s) 186, 1083, 1089
Alw26I GTCTC 4 cut(s) 278, 968, 1116, 1508
AlwI GGATC 3 cut(s) 603, 616, 1339
AlwNI CAGNNNCTG 2 cut(s) 209, 1895
Aor13HI TCCGGA 1 cut(s) 642
ApoI RAATTY 2 cut(s) 425, 1332
AseI ATTAAT 1 cut(s) 771
Asp700I GAANNNNTTC 1 cut(s) 435
AspLEI GCGC 2 cut(s) 295, 523
AsuC2I CCSGG 2 cut(s) 475, 702
AsuHPI GGTGA 3 cut(s) 970, 1199, 1931
AsuII TTCGAA 1 cut(s) 429
AsuNHI GCTAGC 1 cut(s) 379
AvaII GGWCC 8 cut(s) 252, 309, 350, 456, 559, 698, 1228, 1544
BaeGI GKGCMC 1 cut(s) 2272
BalI TGGCCA 1 cut(s) 1064
BamHI GGATCC 1 cut(s) 608
BanI GGYRCC 4 cut(s) 530, 662, 1399, 2269
BanII GRGCYC 2 cut(s) 186, 1089
BauI CACGAG 3 cut(s) 868, 916, 1082
BbsI GAAGAC 2 cut(s) 1995, 2097
Bbv12I GWGCWC 3 cut(s) 186, 1083, 1089
BbvCI CCTCAGC 1 cut(s) 1499
BccI CCATC 9 cut(s) 137, 264, 310, 620, 922, 1054, 1273, 2002, 2194
BceAI ACGGC 7 cut(s) 152, 502, 544, 823, 841, 1198, 1340
BcgI CGANNNNNNTGC 2 cut(s) 1697, 1731
BciT130I CCWGG 3 cut(s) 373, 1066, 1672
BciVI GTATCC 1 cut(s) 1728
BclI TGATCA 2 cut(s) 1897, 1921
BcnI CCSGG 2 cut(s) 475, 702
BcoDI GTCTC 4 cut(s) 278, 968, 1116, 1508
BcuI ACTAGT 1 cut(s) 650
BfaI CTAG 5 cut(s) 380, 651, 1074, 1518, 1755
BfmI CTRYAG 1 cut(s) 1145
BfoI RGCGCY 2 cut(s) 296, 524
BfrI CTTAAG 1 cut(s) 299
BfuAI ACCTGC 1 cut(s) 946
BfuI GTATCC 1 cut(s) 1728
BglI GCCNNNNNGGC 2 cut(s) 56, 1112
BmcAI AGTACT 2 cut(s) 1303, 1640
Bme1390I CCNGG 5 cut(s) 373, 475, 702, 1066, 1672
Bme18I GGWCC 8 cut(s) 252, 309, 350, 456, 559, 698, 1228, 1544
BmgBI CACGTC 1 cut(s) 214
BmiI GGNNCC 9 cut(s) 58, 253, 352, 532, 610, 664, 699, 1401, 2271
BmrFI CCNGG 5 cut(s) 373, 475, 702, 1066, 1672
BmtI GCTAGC 1 cut(s) 383
BpiI GAAGAC 2 cut(s) 1995, 2097
BpmI CTGGAG 3 cut(s) 27, 536, 1532
Bpu10I CCTNAGC 1 cut(s) 1499
Bpu14I TTCGAA 1 cut(s) 429
BpuEI CTTGAG 3 cut(s) 1080, 1299, 1815
BpuMI CCSGG 2 cut(s) 475, 702
BsaHI GRCGYC 2 cut(s) 336, 1125
BsaJI CCNNGG 4 cut(s) 75, 526, 759, 1470
BsaWI WCCGGW 5 cut(s) 197, 589, 642, 679, 1725
BsaXI ACNNNNNCTCC 6 cut(s) 571, 601, 776, 806, 1505, 1535
Bsc4I CCNNNNNNNGG 7 cut(s) 149, 152, 261, 749, 1760, 1877, 2065
Bse118I RCCGGY 5 cut(s) 145, 556, 749, 1157, 1822
Bse1I ACTGG 3 cut(s) 713, 1515, 1716
Bse3DI GCAATG 2 cut(s) 2269, 2292
BseAI TCCGGA 1 cut(s) 642
BseBI CCWGG 3 cut(s) 373, 1066, 1672
BseDI CCNNGG 4 cut(s) 75, 526, 759, 1470
BseLI CCNNNNNNNGG 7 cut(s) 149, 152, 261, 749, 1760, 1877, 2065
BseMI GCAATG 2 cut(s) 2269, 2292
BseMII CTCAG 2 cut(s) 1373, 1490
BseNI ACTGG 3 cut(s) 713, 1515, 1716
BseSI GKGCMC 1 cut(s) 2272
BseYI CCCAGC 1 cut(s) 1532
BsgI GTGCAG 2 cut(s) 222, 1848
Bsh1236I CGCG 2 cut(s) 277, 333
BshNI GGYRCC 4 cut(s) 530, 662, 1399, 2269
BsiHKAI GWGCWC 3 cut(s) 186, 1083, 1089
BslFI GGGAC 2 cut(s) 336, 712
BslI CCNNNNNNNGG 7 cut(s) 149, 152, 261, 749, 1760, 1877, 2065
BsmAI GTCTC 4 cut(s) 278, 968, 1116, 1508
BsmBI CGTCTC 3 cut(s) 278, 968, 1116
BsmFI GGGAC 2 cut(s) 336, 712
Bsp119I TTCGAA 1 cut(s) 429
Bsp1286I GDGCHC 4 cut(s) 186, 1083, 1089, 2272
Bsp13I TCCGGA 1 cut(s) 642
Bsp143I GATC 7 cut(s) 223, 608, 1021, 1344, 1897, 1921, 2134
Bsp19I CCATGG 2 cut(s) 75, 759
BspCNI CTCAG 2 cut(s) 1372, 1491
BspEI TCCGGA 1 cut(s) 642
BspFNI CGCG 2 cut(s) 277, 333
BspHI TCATGA 2 cut(s) 186, 1089
BspLI GGNNCC 9 cut(s) 58, 253, 352, 532, 610, 664, 699, 1401, 2271
BspMAI CTGCAG 1 cut(s) 1149
BspMI ACCTGC 1 cut(s) 946
BspOI GCTAGC 1 cut(s) 383
BspPI GGATC 3 cut(s) 603, 616, 1339
BspT104I TTCGAA 1 cut(s) 429
BspT107I GGYRCC 4 cut(s) 530, 662, 1399, 2269
BspTI CTTAAG 1 cut(s) 299
BsrBI CCGCTC 2 cut(s) 906, 1506
BsrDI GCAATG 2 cut(s) 2269, 2292
BsrFI RCCGGY 5 cut(s) 145, 556, 749, 1157, 1822
BsrI ACTGG 3 cut(s) 713, 1515, 1716
BssAI RCCGGY 5 cut(s) 145, 556, 749, 1157, 1822
BssECI CCNNGG 4 cut(s) 75, 526, 759, 1470
BssMI GATC 7 cut(s) 223, 608, 1021, 1344, 1897, 1921, 2134
BssNI GRCGYC 2 cut(s) 336, 1125
BssSI CACGAG 3 cut(s) 868, 916, 1082
BssT1I CCWWGG 3 cut(s) 75, 759, 1470
Bst2BI CACGAG 3 cut(s) 868, 916, 1082
Bst2UI CCWGG 3 cut(s) 373, 1066, 1672
Bst4CI ACNGT 3 cut(s) 1301, 1858, 1885
Bst6I CTCTTC 7 cut(s) 111, 784, 878, 1004, 1043, 1962, 2160
BstACI GRCGYC 2 cut(s) 336, 1125
BstAFI CTTAAG 1 cut(s) 299
BstAPI GCANNNNNTGC 1 cut(s) 961
BstBI TTCGAA 1 cut(s) 429
BstC8I GCNNGC 8 cut(s) 11, 140, 147, 291, 381, 751, 1104, 1863
BstDEI CTNAG 2 cut(s) 1359, 1499
BstDSI CCRYGG 3 cut(s) 75, 526, 759
BstFNI CGCG 2 cut(s) 277, 333
BstH2I RGCGCY 2 cut(s) 296, 524
BstHHI GCGC 2 cut(s) 295, 523
BstKTI GATC 7 cut(s) 226, 611, 1024, 1347, 1900, 1924, 2137
BstMAI GTCTC 4 cut(s) 278, 968, 1116, 1508
BstMBI GATC 7 cut(s) 223, 608, 1021, 1344, 1897, 1921, 2134
BstNI CCWGG 3 cut(s) 373, 1066, 1672
BstNSI RCATGY 1 cut(s) 110
BstSCI CCNGG 5 cut(s) 371, 473, 700, 1064, 1670
BstSFI CTRYAG 1 cut(s) 1145
BstSLI GKGCMC 1 cut(s) 2272
BstUI CGCG 2 cut(s) 277, 333
BstV2I GAAGAC 2 cut(s) 1995, 2097
BstX2I RGATCY 1 cut(s) 608
BstYI RGATCY 1 cut(s) 608
BsuI GTATCC 1 cut(s) 1728
BtgI CCRYGG 3 cut(s) 75, 526, 759
BtrI CACGTC 1 cut(s) 214
BtsIMutI CAGTG 2 cut(s) 514, 1487
BveI ACCTGC 1 cut(s) 946
Cac8I GCNNGC 8 cut(s) 11, 140, 147, 291, 381, 751, 1104, 1863
CaiI CAGNNNCTG 2 cut(s) 209, 1895
CciI TCATGA 2 cut(s) 186, 1089
CfoI GCGC 2 cut(s) 295, 523
Cfr10I RCCGGY 5 cut(s) 145, 556, 749, 1157, 1822
CpoI CGGWCCG 1 cut(s) 309
CseI GACGC 5 cut(s) 199, 266, 295, 344, 1133
Csp6I GTAC 4 cut(s) 1302, 1588, 1639, 2069
CspI CGGWCCG 1 cut(s) 309
CviAII CATG 6 cut(s) 76, 107, 187, 760, 1090, 1232
CviQI GTAC 4 cut(s) 1302, 1588, 1639, 2069
DdeI CTNAG 2 cut(s) 1359, 1499
DpnI GATC 7 cut(s) 225, 610, 1023, 1346, 1899, 1923, 2136
DpnII GATC 7 cut(s) 223, 608, 1021, 1344, 1897, 1921, 2134
EaeI YGGCCR 3 cut(s) 272, 1062, 1159
Eam1104I CTCTTC 7 cut(s) 111, 784, 878, 1004, 1043, 1962, 2160
EarI CTCTTC 7 cut(s) 111, 784, 878, 1004, 1043, 1962, 2160
EciI GGCGGA 7 cut(s) 98, 154, 255, 543, 924, 1170, 1490
Ecl136II GAGCTC 2 cut(s) 184, 1087
Eco130I CCWWGG 3 cut(s) 75, 759, 1470
Eco24I GRGCYC 2 cut(s) 186, 1089
Eco47I GGWCC 8 cut(s) 252, 309, 350, 456, 559, 698, 1228, 1544
Eco53kI GAGCTC 2 cut(s) 184, 1087
Eco57I CTGAAG 3 cut(s) 15, 21, 1986
EcoICRI GAGCTC 2 cut(s) 184, 1087
EcoO109I RGGNCCY 2 cut(s) 350, 2240
EcoRII CCWGG 3 cut(s) 371, 1064, 1670
EcoT14I CCWWGG 3 cut(s) 75, 759, 1470
EcoT38I GRGCYC 2 cut(s) 186, 1089
ErhI CCWWGG 3 cut(s) 75, 759, 1470
Esp3I CGTCTC 3 cut(s) 278, 968, 1116
FaeI CATG 6 cut(s) 79, 110, 190, 763, 1093, 1235
FalI AAGNNNNNCTT 4 cut(s) 1533, 1565, 1934, 1966
FaqI GGGAC 2 cut(s) 336, 712
FatI CATG 6 cut(s) 75, 106, 186, 759, 1089, 1231
FauI CCCGC 7 cut(s) 2, 142, 254, 754, 841, 1218, 1356
FbaI TGATCA 2 cut(s) 1897, 1921
FblI GTMKAC 1 cut(s) 860
FriOI GRGCYC 2 cut(s) 186, 1089
FspBI CTAG 5 cut(s) 380, 651, 1074, 1518, 1755
GlaI GCGC 2 cut(s) 294, 522
GsaI CCCAGC 1 cut(s) 1536
GsuI CTGGAG 3 cut(s) 27, 536, 1532
HaeII RGCGCY 2 cut(s) 296, 524
HgaI GACGC 5 cut(s) 199, 266, 295, 344, 1133
HhaI GCGC 2 cut(s) 295, 523
Hin1I GRCGYC 2 cut(s) 336, 1125
Hin1II CATG 6 cut(s) 79, 110, 190, 763, 1093, 1235
Hin6I GCGC 2 cut(s) 293, 521
HinP1I GCGC 2 cut(s) 293, 521
HincII GTYRAC 1 cut(s) 861
HindII GTYRAC 1 cut(s) 861
HindIII AAGCTT 1 cut(s) 1041
HinfI GANTC 5 cut(s) 304, 943, 1093, 1597, 1945
HphI GGTGA 3 cut(s) 970, 1199, 1931
Hpy166II GTNNAC 5 cut(s) 439, 562, 861, 1195, 1547
Hpy188I TCNGA 7 cut(s) 313, 608, 948, 1026, 1362, 1794, 2223
Hpy8I GTNNAC 5 cut(s) 439, 562, 861, 1195, 1547
Hpy99I CGWCG 7 cut(s) 338, 839, 862, 865, 895, 898, 1228
HpyAV CCTTC 8 cut(s) 47, 337, 458, 915, 1648, 1993, 2253, 2287
HpyCH4III ACNGT 3 cut(s) 1301, 1858, 1885
HpyCH4IV ACGT 5 cut(s) 213, 435, 540, 1191, 1691
HpyF3I CTNAG 2 cut(s) 1359, 1499
HpySE526I ACGT 5 cut(s) 213, 435, 540, 1191, 1691
Hsp92I GRCGYC 2 cut(s) 336, 1125
Hsp92II CATG 6 cut(s) 79, 110, 190, 763, 1093, 1235
HspAI GCGC 2 cut(s) 293, 521
Kpn2I TCCGGA 1 cut(s) 642
KroI GCCGGC 2 cut(s) 145, 749
KroNI GCCGGC 2 cut(s) 147, 751
Ksp22I TGATCA 2 cut(s) 1897, 1921
Kzo9I GATC 7 cut(s) 223, 608, 1021, 1344, 1897, 1921, 2134
LmnI GCTCC 9 cut(s) 26, 46, 155, 528, 794, 1015, 1207, 1387, 1503
MaeI CTAG 5 cut(s) 380, 651, 1074, 1518, 1755
MaeII ACGT 5 cut(s) 213, 435, 540, 1191, 1691
MaeIII GTNAC 3 cut(s) 392, 494, 1234
MalI GATC 7 cut(s) 225, 610, 1023, 1346, 1899, 1923, 2136
MbiI CCGCTC 2 cut(s) 906, 1506
MboI GATC 7 cut(s) 223, 608, 1021, 1344, 1897, 1921, 2134
MfeI CAATTG 1 cut(s) 1172
MflI RGATCY 1 cut(s) 608
MhlI GDGCHC 4 cut(s) 186, 1083, 1089, 2272
MlsI TGGCCA 1 cut(s) 1064
MluCI AATT 9 cut(s) 172, 425, 708, 772, 1152, 1172, 1277, 1332, 2078
MluNI TGGCCA 1 cut(s) 1064
MlyI GAGTC 1 cut(s) 1087
MmeI TCCRAC 4 cut(s) 807, 1297, 1331, 1825
Mox20I TGGCCA 1 cut(s) 1064
MreI CGCCGGCG 1 cut(s) 145
MroI TCCGGA 1 cut(s) 642
MroNI GCCGGC 2 cut(s) 145, 749
MroXI GAANNNNTTC 1 cut(s) 435
MscI TGGCCA 1 cut(s) 1064
MseI TTAA 2 cut(s) 300, 771
MslI CAYNNNNRTG 1 cut(s) 758
Msp20I TGGCCA 1 cut(s) 1064
MspA1I CMGCKG 4 cut(s) 47, 62, 209, 660
MspCI CTTAAG 1 cut(s) 299
MspR9I CCNGG 5 cut(s) 373, 475, 702, 1066, 1672
MunI CAATTG 1 cut(s) 1172
MvaI CCWGG 3 cut(s) 373, 1066, 1672
MvnI CGCG 2 cut(s) 277, 333
NaeI GCCGGC 2 cut(s) 147, 751
NciI CCSGG 2 cut(s) 475, 702
NcoI CCATGG 2 cut(s) 75, 759
NdeII GATC 7 cut(s) 223, 608, 1021, 1344, 1897, 1921, 2134
NgoMIV GCCGGC 2 cut(s) 145, 749
NheI GCTAGC 1 cut(s) 379
NlaIII CATG 6 cut(s) 79, 110, 190, 763, 1093, 1235
NlaIV GGNNCC 9 cut(s) 58, 253, 352, 532, 610, 664, 699, 1401, 2271
NmeAIII GCCGAG 1 cut(s) 1719
NmuCI GTSAC 1 cut(s) 1234
NspI RCATGY 1 cut(s) 110
NspV TTCGAA 1 cut(s) 429
PagI TCATGA 2 cut(s) 186, 1089
PaqCI CACCTGC 1 cut(s) 946
PcsI WCGNNNNNNNCGW 4 cut(s) 825, 834, 866, 2160
PdiI GCCGGC 2 cut(s) 147, 751
PdmI GAANNNNTTC 1 cut(s) 435
PfeI GAWTC 4 cut(s) 304, 943, 1597, 1945
PfoI TCCNGGA 1 cut(s) 371
PleI GAGTC 1 cut(s) 1087
PpsI GAGTC 1 cut(s) 1087
PpuMI RGGWCCY 1 cut(s) 350
PshBI ATTAAT 1 cut(s) 771
PsiI TTATAA 2 cut(s) 450, 2208
Psp124BI GAGCTC 2 cut(s) 186, 1089
Psp1406I AACGTT 1 cut(s) 435
Psp5II RGGWCCY 1 cut(s) 350
Psp6I CCWGG 3 cut(s) 371, 1064, 1670
PspFI CCCAGC 1 cut(s) 1532
PspGI CCWGG 3 cut(s) 371, 1064, 1670
PspN4I GGNNCC 9 cut(s) 58, 253, 352, 532, 610, 664, 699, 1401, 2271
PspPPI RGGWCCY 1 cut(s) 350
PstI CTGCAG 1 cut(s) 1149
PstNI CAGNNNCTG 2 cut(s) 209, 1895
PsuI RGATCY 1 cut(s) 608
PvuII CAGCTG 2 cut(s) 47, 209
RsaI GTAC 4 cut(s) 1303, 1589, 1640, 2070
RsaNI GTAC 4 cut(s) 1302, 1588, 1639, 2069
RseI CAYNNNNRTG 1 cut(s) 758
Rsr2I CGGWCCG 1 cut(s) 309
RsrII CGGWCCG 1 cut(s) 309
SacI GAGCTC 2 cut(s) 186, 1089
SalI GTCGAC 1 cut(s) 859
SaqAI TTAA 2 cut(s) 300, 771
Sau3AI GATC 7 cut(s) 223, 608, 1021, 1344, 1897, 1921, 2134
ScaI AGTACT 2 cut(s) 1303, 1640
SchI GAGTC 1 cut(s) 1087
ScrFI CCNGG 5 cut(s) 373, 475, 702, 1066, 1672
SduI GDGCHC 4 cut(s) 186, 1083, 1089, 2272
SfcI CTRYAG 1 cut(s) 1145
SfuI TTCGAA 1 cut(s) 429
SgrAI CRCCGGYG 1 cut(s) 145
SgrDI CGTCGACG 1 cut(s) 859
SinI GGWCC 8 cut(s) 252, 309, 350, 456, 559, 698, 1228, 1544
SmiMI CAYNNNNRTG 1 cut(s) 758
SmlI CTYRAG 4 cut(s) 299, 1095, 1314, 1830
SmoI CTYRAG 4 cut(s) 299, 1095, 1314, 1830
SpeI ACTAGT 1 cut(s) 650
Sse9I AATT 9 cut(s) 172, 425, 708, 772, 1152, 1172, 1277, 1332, 2078
SspMI CTAG 5 cut(s) 380, 651, 1074, 1518, 1755
SstI GAGCTC 2 cut(s) 186, 1089
StyD4I CCNGG 5 cut(s) 371, 473, 700, 1064, 1670
StyI CCWWGG 3 cut(s) 75, 759, 1470
TaaI ACNGT 3 cut(s) 1301, 1858, 1885
TaiI ACGT 5 cut(s) 216, 438, 543, 1194, 1694
TaqI TCGA 7 cut(s) 429, 860, 896, 939, 1343, 1460, 2133
TaqII GACCGA 2 cut(s) 297, 1216
TasI AATT 9 cut(s) 172, 425, 708, 772, 1152, 1172, 1277, 1332, 2078
TatI WGTACW 2 cut(s) 1301, 1638
TfiI GAWTC 4 cut(s) 304, 943, 1597, 1945
Tru1I TTAA 2 cut(s) 300, 771
Tru9I TTAA 2 cut(s) 300, 771
TscAI CASTG 2 cut(s) 514, 1494
TseFI GTSAC 1 cut(s) 1234
Tsp45I GTSAC 1 cut(s) 1234
TspDTI ATGAA 4 cut(s) 965, 1271, 2187, 2235
TspGWI ACGGA 2 cut(s) 39, 1379
TspRI CASTG 2 cut(s) 514, 1494
Vha464I CTTAAG 1 cut(s) 299
VpaK11BI GGWCC 8 cut(s) 252, 309, 350, 456, 559, 698, 1228, 1544
VspI ATTAAT 1 cut(s) 771
XapI RAATTY 2 cut(s) 425, 1332
XceI RCATGY 1 cut(s) 110
XmiI GTMKAC 1 cut(s) 860
XmnI GAANNNNTTC 1 cut(s) 435
XspI CTAG 5 cut(s) 380, 651, 1074, 1518, 1755
ZrmI AGTACT 2 cut(s) 1303, 1640
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.