pycom06g11800
MYB Family

Trihelix transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
OG0006309
Physical Location & Seq
Reverse (-)
16992641 .. 16996008
3368 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g11800.4

Sequence Viewer

Length: 2196 bp
ATGAGTGCTGCTGAAGCTGAGGCGTCGGCGGAGCAAGGCCAGCTGGTGGTGGAAGCGGCGTCTCCAATCAGCAGCAGGCCGCCAGCGTCCGCGGCGGTGAATATGGACGAGCTCATGACTCTGTCCGGTGCGGCGGTTGCAGCTGAAGATGCTCTCGCGGATCGAAGTGGCGGTGGTGGGTCCAGCGGGAACAGATGGCCGCGTCAGGAGACCTTGGCGCTTCTAAAAATCAGGTCCGATATGGATGCGGCCTTCCGCGACGCCACCCTCAAAGGCCCCTTGTGGGAAGATGTCTCCAGGAAACTAGCGGAATTGGGGTACAAAAGAAATGCAAAGAAATGCAAGGAGAAATTCGAAAACGTTCACAAATATTACAAGCGGACGAAAGAAGGCCGCGCGGGACGCCAAGACGGCAAAAGTTACAAGTTTTTCAGCGAGATGGAGGCTTTACATGGCACCGCCGCCGCAACGACGGCCAACGTGTCGGCCTCTTCGGGAGTGCACGCCGCACATGCGTCTCCGAACCCGGTTTCCGTCGGGTTTGGGCCTGTCAGTAACCCCATGCCCATCTCATCGTTCAGAATGTCACCCACGATTCCAGTAATGCCCTCCCAACAGCAGCAACAAGCCACTGCAATTCAAATAATACCTTCGTCGCAACCTACAGCCACTCCGATGGACGTCAACTTCTCCTCCAACAGCTCGTCGACTTCCCCGGGAACTGACGACGAGGACGACGATGATGACATGGAAGGAGAGCCCTCGAGTCGGAAGAGAAAACGGGGGAGTGCTAGTACTAGTACCGGAACTAGTGGCGGCGGAAGTACCCGAAAAATGATGGCGTTTTTCGAGGTTTTGATGAAGCAAGTGATGCAAAAGCAAGAGAGCATGCAGCAGAGGTTTCTAGAAGTGATAGAGAAGAGGGAGCAGGACAGGACTATCAGGGAGGAGGCGTGGAAGCGTCAGGAGATGGCCCGGCTAACTCGCGAGCACGAGCTCATGAGTCAAGAGCGGGTCATTTCTGCTTCCAGAGACGCCGCCATTATCGCTTTCCTGCAGAAAATTACTGGCCAGACTATTCAGTTGCCTCCGGCTGTCAACGTCCAAGTCGCTCCCCCACCACCTGTGTCTCCGTCGGTGTCAGTTGTCGCGCCATTACCACAGACAACGCCACAGCCGACGACACAGACATATCAAACACCGCAACAGCAACAACCTCAGCGGCCGCAACAAGTGCAACAAGTTCGTCATGCTCAGCAAACTCAAAATGTTCAAGCGGTGATGGCTGTACCGGAACAACAGGTACCTCCGACGCCGCAGGAGAATATTGCTAGCGGTGGAGGAGGAGGGAGCTCCGAGCCTGCATCGTCCTCTAGATGGCCGAAGGCAGAAGTGTTGGCGCTGATAAAGTTGAGAAGTGGGCTTGAACCGAGGTACCAAGAGGCAGGTCCGAAGGGCCCACTGTGGGAGGAAATCTCAGCCGGTATGGGGCGGATGGGGTACAAGAGGAGTTCCAAGAGGTGCAAGGAGAAATGGGAGAACATCAACAAGTACTTCAAGAAGGTGAAGGAGAGCAACAAGAAGCGGCCGGAGGATGCGAAAACGTGTCCATATTTTCACGAACTAGATGCCCTTTACCGGAAAAGGGTACTTGGCGGCGGGTCTAGCGGCGGCAGCAGCAGCTCATTAGGAAATAGGCTGGAACAACAACCGCAACAACAGGAGAACCCAAAATCGGGTTCATCCACACATCCGCAACCAAGTACGCATACAGTGTCACAAACACAAGGGCAAGTAGTAGCGGCCGGATCAGAAAACAAGGATGCAGATCATAGCACAAGTGTGGAAACAAATTTGAGAGCTAACCTCTTTGGAGAGGGAAAAGAAGAGGCTGCCAAGAAGCCAGAAGACATTGTGAAGGAGTTGATGGAAGTGCATGATCATCACCAGCAAGTTTTCCAGGGGCTGCCACAACATTTAGTAGTAGAGGACTACAACAGGATGGAGGAAGCGGATAGCGATAATCTTATGGATCAAGAGGAGGAGGACATGGAAGACGAAGACATTGACGAGGAAGACGATGAAGAAACGGAACAAGAGAGGAAGATGGCGTATAAGATAGAGTTTCAGAAGCAGAATACAGGCCGTTCGTCTAACGGCGGAGGCAACGGTGCACCTTCTTTCCTCGCCATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000902 GO:0000904 GO:0001101 GO:0001558 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006275 GO:0006351 GO:0006355 GO:0006725 GO:0006807 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0008156 GO:0008361 GO:0009058 GO:0009059 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009653 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0009991 GO:0010026 GO:0010035 GO:0010090 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010564 GO:0010605 GO:0010629 GO:0010948 GO:0016043 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030154 GO:0030308 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031668 GO:0032502 GO:0032535 GO:0032774 GO:0032875 GO:0032876 GO:0032989 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0040008 GO:0042221 GO:0042631 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045786 GO:0045892 GO:0045926 GO:0045934 GO:0046483 GO:0048468 GO:0048519 GO:0048523 GO:0048580 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051128 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065008 GO:0070887 GO:0071214 GO:0071229 GO:0071462 GO:0071496 GO:0071704 GO:0071840 GO:0080090 GO:0090066 GO:0090304 GO:0090329 GO:0090558 GO:0090626 GO:0097159 GO:0097659 GO:0104004 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1901700 GO:1901701 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000037 GO:2000038 GO:2000104 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-bind_4

Protein Analysis

732

Amino Acids

80.08

Weight (kDa)

5.66

Isoelectric Point (pI)

65.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 684
Acc36I ACCTGC 1 cut(s) 1436
Acc65I GGTACC 2 cut(s) 1303, 1434
AccB1I GGYRCC 3 cut(s) 455, 1303, 1434
AccB7I CCANNNNNTGG 1 cut(s) 46
AccBSI CCGCTC 1 cut(s) 1012
AccI GTMKAC 1 cut(s) 707
AccII CGCG 8 cut(s) 92, 158, 202, 258, 396, 398, 987, 1151
AclI AACGTT 1 cut(s) 360
AclWI GGATC 3 cut(s) 168, 1816, 2040
AcoI YGGCCR 7 cut(s) 197, 474, 1069, 1223, 1379, 1586, 1803
AcsI RAATTY 2 cut(s) 350, 1852
AcuI CTGAAG 2 cut(s) 33, 165
AcyI GRCGYC 7 cut(s) 23, 59, 261, 403, 681, 1035, 1313
AflIII ACRYGT 2 cut(s) 480, 1604
AgsI TTSAA 4 cut(s) 641, 1274, 1427, 1558
AhlI ACTAGT 2 cut(s) 797, 809
AjnI CCWGG 2 cut(s) 296, 1959
AjuI GAANNNNNNNTTGG 2 cut(s) 1723, 1755
AleI CACNNNNGTG 1 cut(s) 1841
AloI GAACNNNNNNTCC 2 cut(s) 515, 547
AluBI AGCT 9 cut(s) 17, 43, 112, 143, 702, 997, 1353, 1683, 1862
AluI AGCT 9 cut(s) 17, 43, 112, 143, 702, 997, 1353, 1683, 1862
Alw21I GWGCWC 6 cut(s) 114, 504, 993, 999, 1355, 2176
Alw26I GTCTC 6 cut(s) 66, 203, 298, 522, 1026, 1134
Alw44I GTGCAC 2 cut(s) 500, 2172
AlwI GGATC 3 cut(s) 168, 1816, 2040
AlwNI CAGNNNCTG 1 cut(s) 1966
Ama87I CYCGRG 2 cut(s) 715, 763
ApaI GGGCCC 1 cut(s) 1460
ApaLI GTGCAC 2 cut(s) 500, 2172
ApoI RAATTY 2 cut(s) 350, 1852
Asp700I GAANNNNTTC 1 cut(s) 360
Asp718I GGTACC 2 cut(s) 1303, 1434
AspLEI GCGC 4 cut(s) 220, 398, 1153, 1402
AspS9I GGNCC 8 cut(s) 180, 234, 275, 545, 973, 1448, 1456, 1457
AsuC2I CCSGG 4 cut(s) 527, 716, 717, 976
AsuHPI GGTGA 5 cut(s) 109, 579, 1291, 1576, 1937
AsuII TTCGAA 1 cut(s) 354
AsuNHI GCTAGC 1 cut(s) 1331
AvaI CYCGRG 2 cut(s) 715, 763
AvaII GGWCC 3 cut(s) 180, 234, 1448
BaeGI GKGCMC 3 cut(s) 504, 1460, 2176
BaeI ACNNNNGTAYC 2 cut(s) 1418, 1451
BalI TGGCCA 1 cut(s) 1071
BanI GGYRCC 3 cut(s) 455, 1303, 1434
BanII GRGCYC 5 cut(s) 114, 762, 999, 1355, 1460
BauI CACGAG 1 cut(s) 992
BbsI GAAGAC 4 cut(s) 1914, 2061, 2067, 2082
Bbv12I GWGCWC 6 cut(s) 114, 504, 993, 999, 1355, 2176
BbvCI CCTCAGC 2 cut(s) 18, 1218
BbvI GCAGC 9 cut(s) 84, 152, 631, 904, 1686, 1689, 1692, 1879, 1953
BceAI ACGGC 4 cut(s) 427, 489, 2130, 2173
BcgI CGANNNNNNTGC 6 cut(s) 227, 261, 1226, 1260, 1610, 1644
BciT130I CCWGG 2 cut(s) 298, 1961
BclI TGATCA 1 cut(s) 1939
BcnI CCSGG 4 cut(s) 527, 716, 717, 976
BcoDI GTCTC 6 cut(s) 66, 203, 298, 522, 1026, 1134
BcuI ACTAGT 2 cut(s) 797, 809
BfaI CTAG 9 cut(s) 305, 792, 798, 810, 905, 1332, 1374, 1625, 1665
BfmI CTRYAG 2 cut(s) 663, 1055
BfoI RGCGCY 2 cut(s) 221, 1403
BfuAI ACCTGC 1 cut(s) 1436
BglI GCCNNNNNGGC 1 cut(s) 411
BlpI GCTNAGC 1 cut(s) 1254
BmcAI AGTACT 2 cut(s) 796, 1553
Bme1390I CCNGG 6 cut(s) 298, 527, 716, 717, 976, 1961
Bme18I GGWCC 3 cut(s) 180, 234, 1448
BmeT110I CYCGRG 2 cut(s) 715, 763
BmgT120I GGNCC 8 cut(s) 180, 234, 275, 545, 973, 1448, 1456, 1457
BmiI GGNNCC 6 cut(s) 181, 277, 457, 1305, 1436, 1458
BmrFI CCNGG 6 cut(s) 298, 527, 716, 717, 976, 1961
BmsI GCATC 7 cut(s) 139, 235, 861, 1373, 1585, 1618, 1813
BmtI GCTAGC 1 cut(s) 1335
BpiI GAAGAC 4 cut(s) 1914, 2061, 2067, 2082
BplI GAGNNNNNCTC 4 cut(s) 1460, 1492, 1851, 1883
BpmI CTGGAG 1 cut(s) 280
Bpu10I CCTNAGC 2 cut(s) 18, 1218
Bpu1102I GCTNAGC 1 cut(s) 1254
Bpu14I TTCGAA 1 cut(s) 354
BpuMI CCSGG 4 cut(s) 527, 716, 717, 976
BsaBI GATNNNNATC 1 cut(s) 1827
BsaHI GRCGYC 7 cut(s) 23, 59, 261, 403, 681, 1035, 1313
BsaI GGTCTC 1 cut(s) 203
BsaJI CCNNGG 6 cut(s) 90, 213, 714, 715, 1430, 1960
BsaWI WCCGGW 4 cut(s) 125, 803, 1291, 1638
BsaXI ACNNNNNCTCC 8 cut(s) 655, 677, 685, 707, 778, 808, 938, 968
Bse118I RCCGGY 1 cut(s) 1481
Bse1I ACTGG 2 cut(s) 599, 1072
Bse8I GATNNNNATC 1 cut(s) 1827
BseBI CCWGG 2 cut(s) 298, 1961
BseDI CCNNGG 6 cut(s) 90, 213, 714, 715, 1430, 1960
BseGI GGATG 7 cut(s) 250, 1500, 1600, 1742, 1750, 1828, 2007
BseJI GATNNNNATC 1 cut(s) 1827
BseMII CTCAG 4 cut(s) 9, 1232, 1268, 1491
BseNI ACTGG 2 cut(s) 599, 1072
BseRI GAGGAG 7 cut(s) 682, 962, 1356, 1359, 1522, 2054, 2057
BseSI GKGCMC 3 cut(s) 504, 1460, 2176
BseX3I CGGCCG 3 cut(s) 1223, 1586, 1803
BseXI GCAGC 9 cut(s) 84, 152, 631, 904, 1686, 1689, 1692, 1879, 1953
Bsh1236I CGCG 8 cut(s) 92, 158, 202, 258, 396, 398, 987, 1151
Bsh1285I CGRYCG 3 cut(s) 1226, 1589, 1806
BshNI GGYRCC 3 cut(s) 455, 1303, 1434
BsiEI CGRYCG 3 cut(s) 1226, 1589, 1806
BsiHKAI GWGCWC 6 cut(s) 114, 504, 993, 999, 1355, 2176
BsiHKCI CYCGRG 2 cut(s) 715, 763
BslFI GGGAC 1 cut(s) 414
BsmAI GTCTC 6 cut(s) 66, 203, 298, 522, 1026, 1134
BsmBI CGTCTC 3 cut(s) 66, 522, 1026
BsmFI GGGAC 1 cut(s) 414
Bso31I GGTCTC 1 cut(s) 203
BsoBI CYCGRG 2 cut(s) 715, 763
Bsp119I TTCGAA 1 cut(s) 354
Bsp120I GGGCCC 1 cut(s) 1456
Bsp1286I GDGCHC 8 cut(s) 114, 504, 762, 993, 999, 1355, 1460, 2176
Bsp143I GATC 5 cut(s) 160, 1808, 1828, 1939, 2032
Bsp1720I GCTNAGC 1 cut(s) 1254
Bsp68I TCGCGA 1 cut(s) 987
BspCNI CTCAG 4 cut(s) 10, 1231, 1267, 1490
BspFNI CGCG 8 cut(s) 92, 158, 202, 258, 396, 398, 987, 1151
BspHI TCATGA 2 cut(s) 114, 999
BspLI GGNNCC 6 cut(s) 181, 277, 457, 1305, 1436, 1458
BspMAI CTGCAG 1 cut(s) 1059
BspMI ACCTGC 1 cut(s) 1436
BspOI GCTAGC 1 cut(s) 1335
BspPI GGATC 3 cut(s) 168, 1816, 2040
BspT104I TTCGAA 1 cut(s) 354
BspT107I GGYRCC 3 cut(s) 455, 1303, 1434
BspTNI GGTCTC 1 cut(s) 203
BsrBI CCGCTC 1 cut(s) 1012
BsrFI RCCGGY 1 cut(s) 1481
BsrI ACTGG 2 cut(s) 599, 1072
BssAI RCCGGY 1 cut(s) 1481
BssECI CCNNGG 6 cut(s) 90, 213, 714, 715, 1430, 1960
BssMI GATC 5 cut(s) 160, 1808, 1828, 1939, 2032
BssNI GRCGYC 7 cut(s) 23, 59, 261, 403, 681, 1035, 1313
BssSI CACGAG 1 cut(s) 992
BssT1I CCWWGG 1 cut(s) 213
Bst2BI CACGAG 1 cut(s) 992
Bst2UI CCWGG 2 cut(s) 298, 1961
Bst4CI ACNGT 3 cut(s) 1464, 1774, 2171
Bst6I CTCTTC 4 cut(s) 496, 767, 914, 1881
BstACI GRCGYC 7 cut(s) 23, 59, 261, 403, 681, 1035, 1313
BstAPI GCANNNNNTGC 2 cut(s) 871, 1234
BstBI TTCGAA 1 cut(s) 354
BstC8I GCNNGC 8 cut(s) 41, 77, 84, 504, 890, 989, 1333, 1362
BstDEI CTNAG 4 cut(s) 18, 1218, 1254, 1477
BstDSI CCRYGG 1 cut(s) 90
BstF5I GGATG 7 cut(s) 250, 1500, 1600, 1742, 1750, 1828, 2007
BstFNI CGCG 8 cut(s) 92, 158, 202, 258, 396, 398, 987, 1151
BstH2I RGCGCY 2 cut(s) 221, 1403
BstHHI GCGC 4 cut(s) 220, 398, 1153, 1402
BstKTI GATC 5 cut(s) 163, 1811, 1831, 1942, 2035
BstMAI GTCTC 6 cut(s) 66, 203, 298, 522, 1026, 1134
BstMBI GATC 5 cut(s) 160, 1808, 1828, 1939, 2032
BstMCI CGRYCG 3 cut(s) 1226, 1589, 1806
BstNI CCWGG 2 cut(s) 298, 1961
BstNSI RCATGY 2 cut(s) 515, 892
BstSCI CCNGG 6 cut(s) 296, 525, 714, 715, 974, 1959
BstSFI CTRYAG 2 cut(s) 663, 1055
BstSLI GKGCMC 3 cut(s) 504, 1460, 2176
BstUI CGCG 8 cut(s) 92, 158, 202, 258, 396, 398, 987, 1151
BstV1I GCAGC 9 cut(s) 84, 152, 631, 904, 1686, 1689, 1692, 1879, 1953
BstV2I GAAGAC 4 cut(s) 1914, 2061, 2067, 2082
BstXI CCANNNNNNTGG 1 cut(s) 676
BstZI CGGCCG 3 cut(s) 1223, 1586, 1803
BtgI CCRYGG 1 cut(s) 90
BtsCI GGATG 7 cut(s) 250, 1500, 1600, 1742, 1750, 1828, 2007
BtsI GCAGTG 1 cut(s) 630
BtsIMutI CAGTG 3 cut(s) 630, 1460, 1779
BtuMI TCGCGA 1 cut(s) 987
BveI ACCTGC 1 cut(s) 1436
Cac8I GCNNGC 8 cut(s) 41, 77, 84, 504, 890, 989, 1333, 1362
CaiI CAGNNNCTG 1 cut(s) 1966
CciI TCATGA 2 cut(s) 114, 999
CciNI GCGGCCGC 1 cut(s) 1223
CfoI GCGC 4 cut(s) 220, 398, 1153, 1402
Cfr10I RCCGGY 1 cut(s) 1481
Cfr13I GGNCC 8 cut(s) 180, 234, 275, 545, 973, 1448, 1456, 1457
Cfr42I CCGCGG 1 cut(s) 93
Cfr9I CCCGGG 1 cut(s) 715
DdeI CTNAG 4 cut(s) 18, 1218, 1254, 1477
DpnI GATC 5 cut(s) 162, 1810, 1830, 1941, 2034
DpnII GATC 5 cut(s) 160, 1808, 1828, 1939, 2032
EaeI YGGCCR 7 cut(s) 197, 474, 1069, 1223, 1379, 1586, 1803
EagI CGGCCG 3 cut(s) 1223, 1586, 1803
Eam1104I CTCTTC 4 cut(s) 496, 767, 914, 1881
EarI CTCTTC 4 cut(s) 496, 767, 914, 1881
EciI GGCGGA 4 cut(s) 44, 834, 1507, 2175
Ecl136II GAGCTC 3 cut(s) 112, 997, 1353
EclXI CGGCCG 3 cut(s) 1223, 1586, 1803
Eco130I CCWWGG 1 cut(s) 213
Eco24I GRGCYC 5 cut(s) 114, 762, 999, 1355, 1460
Eco31I GGTCTC 1 cut(s) 203
Eco47I GGWCC 3 cut(s) 180, 234, 1448
Eco52I CGGCCG 3 cut(s) 1223, 1586, 1803
Eco53kI GAGCTC 3 cut(s) 112, 997, 1353
Eco57I CTGAAG 2 cut(s) 33, 165
Eco88I CYCGRG 2 cut(s) 715, 763
EcoICRI GAGCTC 3 cut(s) 112, 997, 1353
EcoO109I RGGNCCY 2 cut(s) 275, 1456
EcoRII CCWGG 2 cut(s) 296, 1959
EcoT14I CCWWGG 1 cut(s) 213
EcoT38I GRGCYC 5 cut(s) 114, 762, 999, 1355, 1460
ErhI CCWWGG 1 cut(s) 213
Esp3I CGTCTC 3 cut(s) 66, 522, 1026
FaqI GGGAC 1 cut(s) 414
FauI CCCGC 4 cut(s) 179, 391, 1005, 1652
FbaI TGATCA 1 cut(s) 1939
FblI GTMKAC 1 cut(s) 707
FokI GGATG 7 cut(s) 257, 1507, 1607, 1729, 1737, 1835, 2014
FriOI GRGCYC 5 cut(s) 114, 762, 999, 1355, 1460
FspBI CTAG 9 cut(s) 305, 792, 798, 810, 905, 1332, 1374, 1625, 1665
GlaI GCGC 4 cut(s) 219, 397, 1152, 1401
GsuI CTGGAG 1 cut(s) 280
HaeII RGCGCY 2 cut(s) 221, 1403
HhaI GCGC 4 cut(s) 220, 398, 1153, 1402
Hin1I GRCGYC 7 cut(s) 23, 59, 261, 403, 681, 1035, 1313
Hin6I GCGC 4 cut(s) 218, 396, 1151, 1400
HinP1I GCGC 4 cut(s) 218, 396, 1151, 1400
HincII GTYRAC 3 cut(s) 685, 708, 1099
HindII GTYRAC 3 cut(s) 685, 708, 1099
HinfI GANTC 4 cut(s) 118, 595, 766, 1003
HphI GGTGA 5 cut(s) 109, 579, 1291, 1576, 1937
Hpy166II GTNNAC 6 cut(s) 364, 502, 685, 708, 1099, 2174
Hpy8I GTNNAC 6 cut(s) 364, 502, 685, 708, 1099, 2174
HpyCH4III ACNGT 3 cut(s) 1464, 1774, 2171
HpyCH4IV ACGT 5 cut(s) 360, 480, 681, 1101, 1604
HpyF3I CTNAG 4 cut(s) 18, 1218, 1254, 1477
HpySE526I ACGT 5 cut(s) 360, 480, 681, 1101, 1604
Hsp92I GRCGYC 7 cut(s) 23, 59, 261, 403, 681, 1035, 1313
HspAI GCGC 4 cut(s) 218, 396, 1151, 1400
KpnI GGTACC 2 cut(s) 1307, 1438
Ksp22I TGATCA 1 cut(s) 1939
KspI CCGCGG 1 cut(s) 93
Kzo9I GATC 5 cut(s) 160, 1808, 1828, 1939, 2032
LmnI GCTCC 5 cut(s) 31, 925, 1117, 1350, 1358
Lsp1109I GCAGC 9 cut(s) 84, 152, 631, 904, 1686, 1689, 1692, 1879, 1953
LweI GCATC 7 cut(s) 139, 235, 861, 1373, 1585, 1618, 1813
MaeI CTAG 9 cut(s) 305, 792, 798, 810, 905, 1332, 1374, 1625, 1665
MaeII ACGT 5 cut(s) 360, 480, 681, 1101, 1604
MaeIII GTNAC 4 cut(s) 419, 554, 585, 1776
MalI GATC 5 cut(s) 162, 1810, 1830, 1941, 2034
MbiI CCGCTC 1 cut(s) 1012
MboI GATC 5 cut(s) 160, 1808, 1828, 1939, 2032
MhlI GDGCHC 8 cut(s) 114, 504, 762, 993, 999, 1355, 1460, 2176
MlsI TGGCCA 1 cut(s) 1071
MluCI AATT 5 cut(s) 311, 350, 636, 1062, 1852
MluNI TGGCCA 1 cut(s) 1071
MlyI GAGTC 3 cut(s) 112, 775, 1012
MmeI TCCRAC 3 cut(s) 720, 749, 1334
Mox20I TGGCCA 1 cut(s) 1071
MroXI GAANNNNTTC 1 cut(s) 360
MscI TGGCCA 1 cut(s) 1071
MslI CAYNNNNRTG 2 cut(s) 674, 1841
Msp20I TGGCCA 1 cut(s) 1071
MspA1I CMGCKG 5 cut(s) 43, 92, 143, 186, 1222
MspR9I CCNGG 6 cut(s) 298, 527, 716, 717, 976, 1961
MvaI CCWGG 2 cut(s) 298, 1961
MvnI CGCG 8 cut(s) 92, 158, 202, 258, 396, 398, 987, 1151
NciI CCSGG 4 cut(s) 527, 716, 717, 976
NdeII GATC 5 cut(s) 160, 1808, 1828, 1939, 2032
NheI GCTAGC 1 cut(s) 1331
NlaIV GGNNCC 6 cut(s) 181, 277, 457, 1305, 1436, 1458
NmuCI GTSAC 2 cut(s) 585, 1776
NotI GCGGCCGC 1 cut(s) 1223
NruI TCGCGA 1 cut(s) 987
NspI RCATGY 2 cut(s) 515, 892
NspV TTCGAA 1 cut(s) 354
OliI CACNNNNGTG 1 cut(s) 1841
PaeI GCATGC 1 cut(s) 892
PaeR7I CTCGAG 1 cut(s) 763
PagI TCATGA 2 cut(s) 114, 999
PcsI WCGNNNNNNNCGW 4 cut(s) 732, 735, 1175, 2076
PdmI GAANNNNTTC 1 cut(s) 360
PfeI GAWTC 1 cut(s) 595
PflFI GACNNNGTC 1 cut(s) 121
PflMI CCANNNNNTGG 1 cut(s) 46
PfoI TCCNGGA 1 cut(s) 296
PleI GAGTC 3 cut(s) 112, 774, 1011
PpsI GAGTC 3 cut(s) 112, 774, 1011
Psp124BI GAGCTC 3 cut(s) 114, 999, 1355
Psp1406I AACGTT 1 cut(s) 360
Psp6I CCWGG 2 cut(s) 296, 1959
PspGI CCWGG 2 cut(s) 296, 1959
PspN4I GGNNCC 6 cut(s) 181, 277, 457, 1305, 1436, 1458
PspOMI GGGCCC 1 cut(s) 1456
PspPI GGNCC 8 cut(s) 180, 234, 275, 545, 973, 1448, 1456, 1457
PspXI VCTCGAGB 1 cut(s) 763
PsrI GAACNNNNNNTAC 2 cut(s) 1287, 1319
PstI CTGCAG 1 cut(s) 1059
PstNI CAGNNNCTG 1 cut(s) 1966
PsyI GACNNNGTC 1 cut(s) 121
PvuII CAGCTG 2 cut(s) 43, 143
RruI TCGCGA 1 cut(s) 987
RseI CAYNNNNRTG 2 cut(s) 674, 1841
SacI GAGCTC 3 cut(s) 114, 999, 1355
SacII CCGCGG 1 cut(s) 93
SalI GTCGAC 1 cut(s) 706
Sau3AI GATC 5 cut(s) 160, 1808, 1828, 1939, 2032
Sau96I GGNCC 8 cut(s) 180, 234, 275, 545, 973, 1448, 1456, 1457
ScaI AGTACT 2 cut(s) 796, 1553
SchI GAGTC 3 cut(s) 112, 775, 1012
ScrFI CCNGG 6 cut(s) 298, 527, 716, 717, 976, 1961
SduI GDGCHC 8 cut(s) 114, 504, 762, 993, 999, 1355, 1460, 2176
SfaNI GCATC 7 cut(s) 139, 235, 861, 1373, 1585, 1618, 1813
SfcI CTRYAG 2 cut(s) 663, 1055
Sfr274I CTCGAG 1 cut(s) 763
Sfr303I CCGCGG 1 cut(s) 93
SfuI TTCGAA 1 cut(s) 354
SgrBI CCGCGG 1 cut(s) 93
SinI GGWCC 3 cut(s) 180, 234, 1448
SlaI CTCGAG 1 cut(s) 763
SmaI CCCGGG 1 cut(s) 717
SmiMI CAYNNNNRTG 2 cut(s) 674, 1841
SmlI CTYRAG 1 cut(s) 763
SmoI CTYRAG 1 cut(s) 763
SpeI ACTAGT 2 cut(s) 797, 809
SphI GCATGC 1 cut(s) 892
Sse9I AATT 5 cut(s) 311, 350, 636, 1062, 1852
SspI AATATT 2 cut(s) 371, 1327
SspMI CTAG 9 cut(s) 305, 792, 798, 810, 905, 1332, 1374, 1625, 1665
SstI GAGCTC 3 cut(s) 114, 999, 1355
StyD4I CCNGG 6 cut(s) 296, 525, 714, 715, 974, 1959
StyI CCWWGG 1 cut(s) 213
TaaI ACNGT 3 cut(s) 1464, 1774, 2171
TaiI ACGT 5 cut(s) 363, 483, 684, 1104, 1607
TaqI TCGA 5 cut(s) 163, 354, 707, 764, 849
TasI AATT 5 cut(s) 311, 350, 636, 1062, 1852
TatI WGTACW 2 cut(s) 794, 1551
TfiI GAWTC 1 cut(s) 595
TscAI CASTG 3 cut(s) 637, 1467, 1779
TseFI GTSAC 2 cut(s) 585, 1776
Tsp45I GTSAC 2 cut(s) 585, 1776
TspDTI ATGAA 3 cut(s) 875, 1731, 2097
TspGWI ACGGA 3 cut(s) 523, 1122, 2105
TspMI CCCGGG 1 cut(s) 715
TspRI CASTG 3 cut(s) 637, 1467, 1779
Tth111I GACNNNGTC 1 cut(s) 121
Van91I CCANNNNNTGG 1 cut(s) 46
VneI GTGCAC 2 cut(s) 500, 2172
VpaK11BI GGWCC 3 cut(s) 180, 234, 1448
XapI RAATTY 2 cut(s) 350, 1852
XbaI TCTAGA 2 cut(s) 904, 1373
XceI RCATGY 2 cut(s) 515, 892
XhoI CTCGAG 1 cut(s) 763
XmaI CCCGGG 1 cut(s) 715
XmiI GTMKAC 1 cut(s) 707
XmnI GAANNNNTTC 1 cut(s) 360
XspI CTAG 9 cut(s) 305, 792, 798, 810, 905, 1332, 1374, 1625, 1665
ZraI GACGTC 1 cut(s) 682
ZrmI AGTACT 2 cut(s) 796, 1553
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.